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SRX3577811: Mapped reads for uncultivated Cyanobacteria bacterium UBA11367 genome recovered from SRX806401
1 ILLUMINA (Illumina HiSeq 2500) run: 682,392 spots, 133.9M bases, 70.6Mb downloads

Design: Reads from SRX806401 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11367 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Cyanobacteria bacterium UBA11367 genome recovered from SRX806401
SAMN08018636 • SRS2847539 • All experiments • All runs
Library:
Name: UBA11367_library
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 682,392 spots, 133.9M bases, 70.6Mb
Run# of Spots# of BasesSizePublished
SRR6487984682,392133.9M70.6Mb2018-02-23

ID:
4963313

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