Bd in vitro RNAseq - SRA

SRX1865245: Bd in vitro RNAseq
4 ILLUMINA (Illumina HiSeq 2000) runs: 100.7M spots, 20.4G bases, 11.2Gb downloads

SRR3707957

Design: RNA from 5 day-old growing cultures in PmTG broth of Bd was extracted with the RNeasy Plant kit (Qiagen), according to the manufacturer's instructions. Strand-specific libraries were constructed for each of the three replicates for each condition, and paired-end reads were generated on an Illumina Hiseq2000.

Submitted by: IMPERIAL COLLEGE

Study: RNAseq of Batrachochytrium dendrobatidis JEL423 in vitro (Farrer et al NatComm 2017)

PRJNA326253 • SRP076802 • All experiments • All runs

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Batrachochytrium dendrobatidis RNAseq from in vitro conditions

Sample: Pathogen: RNAseq from in vitro Batrachochytrium dendrobatidis

SAMN05272496 • SRS1516015 • All experiments • All runs

Organism: Batrachochytrium dendrobatidis JEL423

Library:

Name: BD1

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Runs: 4 runs, 100.7M spots, 20.4G bases, 11.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR3707435	21,555,877	4.4G	2.3Gb	2016-08-20
SRR16956420	32,794,978	6.6G	3.8Gb	2021-11-16
SRR16956421	27,968,967	5.6G	3.2Gb	2021-11-16
SRR16956432	18,428,485	3.7G	1.9Gb	2021-11-16

ID:: 2661190

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