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SRX3572189: Mapped reads for uncultivated Rhodoferax bacterium UBA10137 genome recovered from SRX764704
1 ILLUMINA (Illumina HiSeq 2000) run: 1.2M spots, 272.9M bases, 136.3Mb downloads

Design: Reads from SRX764704 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA10137 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Rhodoferax bacterium UBA10137 genome recovered from SRX764704
SAMN08020023 • SRS2843161 • All experiments • All runs
Organism: Rhodoferax sp.
Library:
Name: UBA10137_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.2M spots, 272.9M bases, 136.3Mb
Run# of Spots# of BasesSizePublished
SRR64822751,168,766272.9M136.3Mb2018-03-05

ID:
4957691

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