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8KDA:
Cryo-EM structure of Hydrogenobacter thermophilus minimal protein-only RNase P (HARP) in complex with pre-tRNAs
PDB ID:
8KDA
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MMDB ID:
250960
PDB Deposition Date:
2023/8/9
Updated in MMDB:
2024/08
Experimental Method:
electron microscopy
Resolution:
3.19 Å
Source Organism:
Hydrogenobacter thermophilus TK-6
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Taxonomy
Molecule
Hydrogenobacter thermophilus TK-6
E, F, G, H, C, D, I, J, A, B, K, L
Aquifex aeolicus
T, M, N, O, P
Similar Structures:
VAST+
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Biological Unit for 8KDA: heptadecameric; determined by author and by software
Molecular Components in 8KDA
Label
Count
Molecule
Proteins (12 molecules)
E
F
G
H
C
D
I
J
A
B
K
L
12
RNA-free Ribonuclease P
Nucleotides(5 molecules)
T
M
N
O
P
5
Aquifex Aeolicus Pre-trnaval
Chemicals and Non-standard biopolymers (5 molecules)
1
5
MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303