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TGME49_248200 ribosomal RNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase, putative [ Toxoplasma gondii ME49 ]

Gene ID: 7895956, updated on 26-Oct-2024

Summary

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Gene symbol
TGME49_248200
Gene description
ribosomal RNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase, putative
Locus tag
TGME49_248200
See related
ToxoDB:TGME49_248200; VEuPathDB:TGME49_248200
Gene type
protein coding
RNA name
ribosomal RNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase, putative
RefSeq status
PROVISIONAL
Organism
Toxoplasma gondii ME49 (strain: ME49)
Lineage
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma
Old locus tag
TGME49_048200
Orthologs
all
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Genomic context

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Location:
chromosome: XII
Exon count:
5
Sequence:
Chromosome: XII; NC_031480.1 (3738710..3744083)

Chromosome XII - NC_031480.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene PF2 arrest specific protein 8/11, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031480.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (adenine-N6,N6-)-dimethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ribosomal RNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase, putative
XP_002367167.1
  • encoded by transcript TGME49_248200

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_031480.1 Reference assembly

    Range
    3738710..3744083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002367126.2 → XP_002367167.1  ribosomal RNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase, putative [Toxoplasma gondii ME49]

    See identical proteins and their annotated locations for XP_002367167.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0F7V7U7, A0A125YXC0, A0A3R8B6A6, B6KH44, B9QDB4, S7V0X8, S8ENR7
    Conserved Domains (1) summary
    PTZ00338
    Location:161 → 451
    PTZ00338; dimethyladenosine transferase-like protein; Provisional
Nucleotide Protein
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