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    Kiss1 KiSS-1 metastasis-suppressor [ Rattus norvegicus (Norway rat) ]

    Gene ID: 289023, updated on 9-Dec-2024

    Summary

    Official Symbol
    Kiss1provided by RGD
    Official Full Name
    KiSS-1 metastasis-suppressorprovided by RGD
    Primary source
    RGD:727850
    See related
    EnsemblRapid:ENSRNOG00000047481 AllianceGenome:RGD:727850
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Eseptin
    Summary
    Enables kisspeptin receptor binding activity. Involved in several processes, including generation of ovulation cycle rhythm; phospholipase C-activating G protein-coupled receptor signaling pathway; and positive regulation of cell communication. Located in apical plasma membrane; extracellular space; and neuronal cell body. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 13 with or without anosmia. Orthologous to human KISS1 (KiSS-1 metastasis suppressor). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 3.2), Liver (RPKM 2.0) and 4 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Kiss1 in Genome Data Viewer
    Location:
    13q13
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (47327159..47332759)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (44775106..44780707)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (50529506..50537603, complement)

    Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing A6 Neighboring gene golgi transport 1A Neighboring gene uncharacterized LOC102550525 Neighboring gene renin Neighboring gene ethanolamine kinase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding TAS
    Traceable Author Statement
    more info
    PubMed 
    enables kisspeptin receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables kisspeptin receptor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in G protein-coupled receptor signaling pathway TAS
    Traceable Author Statement
    more info
    PubMed 
    acts_upstream_of_or_within decidualization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in generation of ovulation cycle rhythm IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of cell migration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cell population proliferation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of MAPK cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of cytosolic calcium ion concentration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of growth hormone secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of luteinizing hormone secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of luteinizing hormone secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    NOT involved_in positive regulation of stress-activated MAPK cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of synaptic transmission IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    metastasis-suppressor KiSS-1
    Names
    Kiss1 variant E1a-E2b-E3
    Kiss1 variant E1b-E2a-E3
    Kiss1 variant E1b-E2b-E3
    MLL septin-like fusion
    kisspeptin-1
    metastin

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001412625.1NP_001399554.1  metastasis-suppressor KiSS-1 precursor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000013
      UniProtKB/Swiss-Prot
      Q7TSB7
      UniProtKB/TrEMBL
      J7H5M8, J7HBH5
    2. NM_181692.2NP_859043.1  metastasis-suppressor KiSS-1 precursor

      See identical proteins and their annotated locations for NP_859043.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000013
      UniProtKB/Swiss-Prot
      Q7TSB7
      UniProtKB/TrEMBL
      J7H5M8, J7HBH5
      Related
      ENSRNOP00000099835.1, ENSRNOT00000128335.1
      Conserved Domains (1) summary
      pfam15152
      Location:46120
      Kisspeptin; Kisspeptin

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086031.1 Reference GRCr8

      Range
      47327159..47332759
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)