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    Tmem132b transmembrane protein 132B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 304458, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Tmem132bprovided by RGD
    Official Full Name
    transmembrane protein 132Bprovided by RGD
    Primary source
    RGD:1566191
    See related
    EnsemblRapid:ENSRNOG00000038406 AllianceGenome:RGD:1566191
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1566191
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM132B (transmembrane protein 132B). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 79.8) and Kidney (RPKM 4.1) See more
    Orthologs
    human mouse all
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    Genomic context

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    See Tmem132b in Genome Data Viewer
    Location:
    12q14
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (36491241..36755221, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (30829831..31093841, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (35969718..36398233, complement)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120095960 Neighboring gene Y-linked testis-specific protein 1-like Neighboring gene uncharacterized LOC134481289 Neighboring gene uncharacterized LOC120095961 Neighboring gene acetoacetyl-CoA synthetase Neighboring gene Bri3 binding protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 132B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134536.3 → NP_001128008.2  transmembrane protein 132B precursor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012
      UniProtKB/TrEMBL
      A0A0G2K3D9
      Related
      ENSRNOP00000072599.2, ENSRNOT00000090944.3

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      36491241..36755221 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039089430.2 → XP_038945358.1  transmembrane protein 132B isoform X1

      UniProtKB/TrEMBL
      A6J0V8
      Related
      ENSRNOP00000110286.1, ENSRNOT00000172098.1
      Conserved Domains (3) summary
      pfam15705
      Location:1 → 110
      TMEM132D_N; Mature oligodendrocyte transmembrane protein, TMEM132D, N-term
      pfam15706
      Location:807 → 888
      TMEM132D_C; Mature oligodendrocyte transmembrane protein, TMEM132D, C-term
      pfam16070
      Location:369 → 711
      TMEM132; Transmembrane protein family 132

    2. XM_039089432.2 → XP_038945360.1  transmembrane protein 132B isoform X1

      UniProtKB/TrEMBL
      A6J0V8
      Conserved Domains (3) summary
      pfam15705
      Location:1 → 110
      TMEM132D_N; Mature oligodendrocyte transmembrane protein, TMEM132D, N-term
      pfam15706
      Location:807 → 888
      TMEM132D_C; Mature oligodendrocyte transmembrane protein, TMEM132D, C-term
      pfam16070
      Location:369 → 711
      TMEM132; Transmembrane protein family 132

    3. XM_039089434.2 → XP_038945362.1  transmembrane protein 132B isoform X2

      Conserved Domains (2) summary
      pfam15706
      Location:513 → 594
      TMEM132D_C; Mature oligodendrocyte transmembrane protein, TMEM132D, C-term
      pfam16070
      Location:75 → 417
      TMEM132; Transmembrane protein family 132
    Nucleotide Protein Strain
    Heading Accession and Version

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