|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10510 |
PRK10510 |
OmpA family lipoprotein; |
1-141 |
6.98e-106 |
|
OmpA family lipoprotein;
Pssm-ID: 182507 [Multi-domain] Cd Length: 219 Bit Score: 301.02 E-value: 6.98e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 1 YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGH 80
Cdd:PRK10510 79 YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSH 158
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
2N48_A 81 DLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL 141
Cdd:PRK10510 159 DLNMRLSQQRADSVASALITQGVDASRIRTQGMGPANPIASNSTAEGKAQNRRVEITLSPL 219
|
|
| OmpA_C-like |
cd07185 |
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ... |
35-138 |
2.11e-46 |
|
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.
Pssm-ID: 143586 [Multi-domain] Cd Length: 106 Bit Score: 146.16 E-value: 2.11e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 35 NVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLG 114
Cdd:cd07185 3 TIYFDFGSAELTPEAKPLLDKLAEVLKKNPDAKIRIEGHTDSRGSDAYNQELSERRAEAVADYLVSKGVDASRITAVGYG 82
|
90 100
....*....|....*....|....
2N48_A 115 PANPIASNSTAEGKAQNRRVEITL 138
Cdd:cd07185 83 ESRPIASNDTEEGRAKNRRVEIVI 106
|
|
| OmpA |
COG2885 |
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ... |
32-140 |
1.26e-42 |
|
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442131 [Multi-domain] Cd Length: 294 Bit Score: 142.61 E-value: 1.26e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 32 MPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQ 111
Cdd:COG2885 185 LLSNVYFDFDSAELTPEAKAALDELAALLKENPDLRIEIEGHTDSRGSDAYNLALSERRAEAVKDYLVSKGIPASRITAV 264
|
90 100
....*....|....*....|....*....
2N48_A 112 GLGPANPIASNSTAEGKAQNRRVEITLSP 140
Cdd:COG2885 265 GYGESRPVASNDTEEGRAKNRRVEIVVLK 293
|
|
| type_VI_ompA |
TIGR03350 |
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, ... |
10-138 |
4.00e-28 |
|
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, the Gram-negative bacterial outer membrane protein OmpA (with an N-terminal outer membrane beta barrel domain) share a C-terminal peptidoglycan-associating homology region. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 274533 [Multi-domain] Cd Length: 137 Bit Score: 100.84 E-value: 4.00e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 10 LRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPkTAVNVIGYTDS----TGGHDLNMR 85
Cdd:TIGR03350 6 LAPEIAAGLLTVDEDGDRSVVRLRGDELFASGSAEVRAEFEPLLLRIAKALAAVP-GRITVVGHTDNvpirTARFPSNWH 84
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
2N48_A 86 LSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITL 138
Cdd:TIGR03350 85 LSEARAKAVADVLAQAGGPAGRVRAEGRGDSEPIASNATAAGRARNRRVEIDV 137
|
|
| OmpA |
pfam00691 |
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in ... |
38-131 |
6.43e-24 |
|
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in the Prosite family.
Pssm-ID: 425825 [Multi-domain] Cd Length: 95 Bit Score: 88.96 E-value: 6.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 38 FDSSSATLKPAGANTLTGVAMVLKEYP-KTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPA 116
Cdd:pfam00691 1 FDPGSSQLTPKAKATLDEIADLLKFPElKNTITIEGHTDTVGSAAYNWELSQRRAEAVRRYLVNFGVPPSRISVVGYGAT 80
|
90
....*....|....*
2N48_A 117 NPIASNSTAEGKAQN 131
Cdd:pfam00691 81 KPITDNKTPEGRARN 95
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10510 |
PRK10510 |
OmpA family lipoprotein; |
1-141 |
6.98e-106 |
|
OmpA family lipoprotein;
Pssm-ID: 182507 [Multi-domain] Cd Length: 219 Bit Score: 301.02 E-value: 6.98e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 1 YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGH 80
Cdd:PRK10510 79 YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSH 158
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
2N48_A 81 DLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL 141
Cdd:PRK10510 159 DLNMRLSQQRADSVASALITQGVDASRIRTQGMGPANPIASNSTAEGKAQNRRVEITLSPL 219
|
|
| OmpA_C-like |
cd07185 |
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ... |
35-138 |
2.11e-46 |
|
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.
Pssm-ID: 143586 [Multi-domain] Cd Length: 106 Bit Score: 146.16 E-value: 2.11e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 35 NVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLG 114
Cdd:cd07185 3 TIYFDFGSAELTPEAKPLLDKLAEVLKKNPDAKIRIEGHTDSRGSDAYNQELSERRAEAVADYLVSKGVDASRITAVGYG 82
|
90 100
....*....|....*....|....
2N48_A 115 PANPIASNSTAEGKAQNRRVEITL 138
Cdd:cd07185 83 ESRPIASNDTEEGRAKNRRVEIVI 106
|
|
| OmpA |
COG2885 |
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ... |
32-140 |
1.26e-42 |
|
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442131 [Multi-domain] Cd Length: 294 Bit Score: 142.61 E-value: 1.26e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 32 MPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQ 111
Cdd:COG2885 185 LLSNVYFDFDSAELTPEAKAALDELAALLKENPDLRIEIEGHTDSRGSDAYNLALSERRAEAVKDYLVSKGIPASRITAV 264
|
90 100
....*....|....*....|....*....
2N48_A 112 GLGPANPIASNSTAEGKAQNRRVEITLSP 140
Cdd:COG2885 265 GYGESRPVASNDTEEGRAKNRRVEIVVLK 293
|
|
| MotB |
COG1360 |
Flagellar motor protein MotB [Cell motility]; |
8-140 |
2.65e-34 |
|
Flagellar motor protein MotB [Cell motility];
Pssm-ID: 440971 [Multi-domain] Cd Length: 174 Bit Score: 117.64 E-value: 2.65e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 8 AKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKtAVNVIGYTD----STGGHDLN 83
Cdd:COG1360 33 SALEENLLSGQVEVRITEEGLVIEIQDRVLFDSGSAELTPEGRELLDKIAAVLAEVPN-RIRVEGHTDnvpiSTARFPSN 111
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
2N48_A 84 MRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 140
Cdd:COG1360 112 WELSAARAAAVVRYLIEGGVPPERLSAVGYGDTRPLAPNDTPEGRARNRRVEIVILR 168
|
|
| type_VI_ompA |
TIGR03350 |
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, ... |
10-138 |
4.00e-28 |
|
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, the Gram-negative bacterial outer membrane protein OmpA (with an N-terminal outer membrane beta barrel domain) share a C-terminal peptidoglycan-associating homology region. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 274533 [Multi-domain] Cd Length: 137 Bit Score: 100.84 E-value: 4.00e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 10 LRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPkTAVNVIGYTDS----TGGHDLNMR 85
Cdd:TIGR03350 6 LAPEIAAGLLTVDEDGDRSVVRLRGDELFASGSAEVRAEFEPLLLRIAKALAAVP-GRITVVGHTDNvpirTARFPSNWH 84
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
2N48_A 86 LSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITL 138
Cdd:TIGR03350 85 LSEARAKAVADVLAQAGGPAGRVRAEGRGDSEPIASNATAAGRARNRRVEIDV 137
|
|
| OmpA |
pfam00691 |
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in ... |
38-131 |
6.43e-24 |
|
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in the Prosite family.
Pssm-ID: 425825 [Multi-domain] Cd Length: 95 Bit Score: 88.96 E-value: 6.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 38 FDSSSATLKPAGANTLTGVAMVLKEYP-KTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPA 116
Cdd:pfam00691 1 FDPGSSQLTPKAKATLDEIADLLKFPElKNTITIEGHTDTVGSAAYNWELSQRRAEAVRRYLVNFGVPPSRISVVGYGAT 80
|
90
....*....|....*
2N48_A 117 NPIASNSTAEGKAQN 131
Cdd:pfam00691 81 KPITDNKTPEGRARN 95
|
|
| PRK09038 |
PRK09038 |
flagellar motor protein MotD; Reviewed |
19-139 |
5.38e-23 |
|
flagellar motor protein MotD; Reviewed
Pssm-ID: 181618 [Multi-domain] Cd Length: 281 Bit Score: 91.23 E-value: 5.38e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 19 VSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPkTAVNVIGYTD----STGGHDLNMRLSQQRADSV 94
Cdd:PRK09038 118 VTVRRNELWIEIEINSSLLFGSGDAMLSDQAFAILEKVAEVLKPAP-NPIHVEGFTDnvpiATAQFPSNWELSAARAASV 196
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
2N48_A 95 ASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLS 139
Cdd:PRK09038 197 VRLLADDGVAPSRLAAVGYGEFQPVADNDTAEGRARNRRVVLVIL 241
|
|
| motB |
PRK08457 |
flagellar motor protein MotB; Reviewed |
3-139 |
8.08e-23 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 181435 [Multi-domain] Cd Length: 257 Bit Score: 90.16 E-value: 8.08e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 3 MDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAG-ANTLTGVAMVLKEYPK-TAVNVIGYTDSTGGH 80
Cdd:PRK08457 91 SQNTQQETIERRKGEGGALDQIDNGIALKLPSKLLFENGSAEIINADmMDYLKRIAKIITKLPKqVKINVRGYTDNSPLN 170
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
2N48_A 81 DL----NMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLS 139
Cdd:PRK08457 171 KSrykdHYELAAARAYNVMKVLIQYGINPNRLSFSSYGSNNPIAPNDSLENRLKNNRVEIFFK 233
|
|
| PRK07033 |
PRK07033 |
DotU family type VI secretion system protein; |
38-138 |
1.90e-22 |
|
DotU family type VI secretion system protein;
Pssm-ID: 180801 [Multi-domain] Cd Length: 427 Bit Score: 91.65 E-value: 1.90e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 38 FDSSSATLKPAGANTLTGVAMVLKEYpKTAVNVIGYTDSTGGHDL----NMRLSQQRADSVASALITQGVDASRIRTQGL 113
Cdd:PRK07033 318 FASASTSVRDRYQPVLARVADALNQV-KGNVLVTGYSDNVPIRTArfpsNWELSQARAQAVRALLAARLGQPERVTAEGR 396
|
90 100
....*....|....*....|....*
2N48_A 114 GPANPIASNSTAEGKAQNRRVEITL 138
Cdd:PRK07033 397 GDSDPVAPNDSAENRARNRRVEITL 421
|
|
| motB |
PRK08944 |
flagellar motor protein MotB; Reviewed |
3-140 |
1.79e-20 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 236356 [Multi-domain] Cd Length: 302 Bit Score: 84.68 E-value: 1.79e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 3 MDVQEAKLRDKMR-----GTgVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTaVNVIGYTDST 77
Cdd:PRK08944 144 IEDLVKKLAQQLEkeiedGA-IEIESLGQQIIIRIREKGSFPSGSAFLQPKFKPVVRKIGELLKDVPGI-ITVSGHTDNV 221
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
2N48_A 78 GGHDL----NMRLSQQRADSVASALIT-QGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 140
Cdd:PRK08944 222 PISSElyrsNWDLSSARAVAVAHELLKvKGFDPQRLKVVGMADTQPLVPNDTAENRARNRRVEIIIEQ 289
|
|
| PRK10808 |
PRK10808 |
outer membrane protein A; Reviewed |
35-136 |
1.05e-18 |
|
outer membrane protein A; Reviewed
Pssm-ID: 236764 [Multi-domain] Cd Length: 351 Bit Score: 80.50 E-value: 1.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 35 NVTFDSSSATLKPAGANTLTGVAMVLKEY-PKT-AVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQG 112
Cdd:PRK10808 225 DVLFNFNKATLKPEGQQALDQLYSQLSNLdPKDgSVVVLGYTDRIGSDAYNQGLSEKRAQSVVDYLVSKGIPADKISARG 304
|
90 100 110
....*....|....*....|....*....|...
2N48_A 113 LGPANPIASNSTAEGK---------AQNRRVEI 136
Cdd:PRK10808 305 MGKSNPVTGNTCDNVKpraalidclAPDRRVEI 337
|
|
| PRK08126 |
PRK08126 |
hypothetical protein; Provisional |
36-140 |
1.44e-18 |
|
hypothetical protein; Provisional
Pssm-ID: 236157 [Multi-domain] Cd Length: 432 Bit Score: 80.89 E-value: 1.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 36 VTFdSSSATLKPAGANTLTGV----AMVLKEYPKT--AVNVIGYTDSTGGHDL----NMRLSQQRADSVASALITQGVDA 105
Cdd:PRK08126 319 VVF-RGDAMFVPGQATVNPAMgpliAKIAREIARVggKVTVTGHTDNQPIRSAqfasNLVLSEKRAAQVAQMLQSAGVPA 397
|
90 100 110
....*....|....*....|....*....|....*
2N48_A 106 SRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 140
Cdd:PRK08126 398 SRLEAVGKGDAQPVADNRTPQGRAQNRRVEITVAE 432
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
36-138 |
2.44e-18 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 79.62 E-value: 2.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 36 VTFDSSSATLKPAGANTLTGVAMVLKEYPK---TAVN----VIGYTD-----STGGHDLNMRLSQQRADSVASALITQGV 103
Cdd:PRK09039 226 VLFPTGSAELNPEGQAEIAKLAAALIELAKeipPEINwvlrVDGHTDnvplsGTGRFRDNWELSSARAISVVKFLIALGV 305
|
90 100 110
....*....|....*....|....*....|....*
2N48_A 104 DASRIRTQGLGPANPIASNSTAEGKAQNRRVEITL 138
Cdd:PRK09039 306 PADRLAAAGFGEFQPLDPGDTPEARARNRRIELKL 340
|
|
| pdsO |
TIGR03789 |
proteobacterial sortase system peptidoglycan-associated protein; A newly defined histidine ... |
35-138 |
2.79e-18 |
|
proteobacterial sortase system peptidoglycan-associated protein; A newly defined histidine kinase (TIGR03785) and response regulator (TIGR03787) gene pair occurs exclusively in Proteobacteria, mostly of marine origin, nearly all of which contain a subfamily 6 sortase (TIGR03784) and its single dedicated target protein (TIGR03788) adjacent to to the sortase. This protein family shows up in only in those species with the histidine kinase/response regulator gene pair, and often adjacent to that pair. It belongs to the pfam00691 domain family, which is the peptidoglycan-associated region of flagellar motor protein MotB, OmpA (whose N-terminal region forms an outer membrane beta barrel), and peptidoglycan-associated lipoprotein Pal. Its function is unknown. We assign the gene symbol pdsO, for Proteobacterial Dedicated Sortase system OmpA family protein. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274783 [Multi-domain] Cd Length: 243 Bit Score: 77.92 E-value: 2.79e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 35 NVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLG 114
Cdd:TIGR03789 140 NVQFRTGSSDIEPHFQPQLDEVATLMKQSPELKLDLSGYADRRGDSQYNQALSEQRVLEVRSYLIKQGVDEARLTTQAFG 219
|
90 100
....*....|....*....|....
2N48_A 115 PANPIASNSTAEGKAQNRRVEITL 138
Cdd:TIGR03789 220 ESAPLKDEQESESDFFDRRVTLTL 243
|
|
| PRK09040 |
PRK09040 |
hypothetical protein; Provisional |
35-140 |
8.10e-18 |
|
hypothetical protein; Provisional
Pssm-ID: 181620 [Multi-domain] Cd Length: 214 Bit Score: 76.21 E-value: 8.10e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 35 NVTFDSSSATLKPAGANTLTGVAMVLKEYPKT---AVNVIGYTDSTGGHDLNMR------LSQQRADSVASALITQGVDA 105
Cdd:PRK09040 89 SVLFALNSDQLQPEGRELLKSLAGPLAAYLRArdeILMVSGFTDDQPVRAGNRRfadnweLSAQRALTVTRALIDAGVPA 168
|
90 100 110
....*....|....*....|....*....|....*
2N48_A 106 SRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 140
Cdd:PRK09040 169 SSVFAAAFGSEQPVASNADDEGRAKNRRVEIAPVP 203
|
|
| PRK09967 |
PRK09967 |
OmpA family protein; |
22-140 |
9.85e-18 |
|
OmpA family protein;
Pssm-ID: 182172 [Multi-domain] Cd Length: 160 Bit Score: 75.02 E-value: 9.85e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 22 TRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQ 101
Cdd:PRK09967 40 TESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMG 119
|
90 100 110 120
....*....|....*....|....*....|....*....|
2N48_A 102 G-VDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP 140
Cdd:PRK09967 120 GqIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITT 159
|
|
| motB |
PRK07734 |
flagellar motor protein MotB; Reviewed |
7-141 |
3.58e-15 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 236080 [Multi-domain] Cd Length: 259 Bit Score: 70.16 E-value: 3.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 7 EAKLRDKMRGTGVSVTrsgdniILNmpnNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDL---- 82
Cdd:PRK07734 124 SSSLQTKLTEEGLLIT------ILD---NILFDSGKADVRLEDLPLAKEISNLLVSNPPRNITISGHTDNVPIANAqfas 194
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 83 NMRLSQQRADSVASALI-TQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL 141
Cdd:PRK07734 195 NWELSVMRAVNFMQVLLeNKELDPEKFSAKGYGEYKPIASNDTAEGRAKNRRVEVLILPL 254
|
|
| PRK06925 |
PRK06925 |
flagellar motor protein MotB; |
5-139 |
3.34e-13 |
|
flagellar motor protein MotB;
Pssm-ID: 235887 [Multi-domain] Cd Length: 230 Bit Score: 64.40 E-value: 3.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 5 VQEAKLRDKMrgtgvSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTaVNVIGYTDS----TGGH 80
Cdd:PRK06925 94 IEENELKSVI-----TAKRDERGVVLVLQEAVLFETGEADILKQAEPFLHKIGVLLSTIPND-IKVEGHTDSrpisTYRY 167
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 81 DLNMRLSQQRADSVASALI-TQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLS 139
Cdd:PRK06925 168 PSNWELSAARASSVIRYFTsKEKLDSSRFIAVGYADTKPVVPNTTEENMQENRRVEIVIS 227
|
|
| motB |
PRK06667 |
flagellar motor protein MotB; Validated |
19-136 |
1.17e-10 |
|
flagellar motor protein MotB; Validated
Pssm-ID: 180652 [Multi-domain] Cd Length: 252 Bit Score: 57.50 E-value: 1.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 19 VSVTRSGDNIILNMPNNVTFDSSSATLK-PAGANTLTGVAMVLKEYPKTA--VNVIGYTDST-----GGHDLNMRLSQQR 90
Cdd:PRK06667 110 VAVTEDERGLVISLASDAFFYPGSAEVKlEENRETLQKIASFIGFLDLAGrnFRIEGHTDNVdvnpeGPWKSNWELSGAR 189
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
2N48_A 91 ADSVASALITQGV-DASRIRTQGLGPANPIASNSTAEGKAQNRRVEI 136
Cdd:PRK06667 190 AVNMLEYILNYGDqSESWFQVSGFAGSRPLATEDTPEGRAYNRRIDI 236
|
|
| PRK06742 |
PRK06742 |
flagellar motor protein MotS; Reviewed |
3-136 |
3.13e-09 |
|
flagellar motor protein MotS; Reviewed
Pssm-ID: 102525 [Multi-domain] Cd Length: 225 Bit Score: 53.53 E-value: 3.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 3 MDVQEAKLRDKMRGTGVS---VTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVnVIGYTDSTGG 79
Cdd:PRK06742 81 MDELYKKLKAYVDNNGISqvnVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIV-VEGHTDSRPI 159
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
2N48_A 80 HDL----NMRLSQQRADSVASALI-TQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEI 136
Cdd:PRK06742 160 HNDkfpsNWELSSARAANMIHHLIeVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRVVI 221
|
|
| PRK07034 |
PRK07034 |
hypothetical protein; Provisional |
38-136 |
3.86e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 168775 [Multi-domain] Cd Length: 536 Bit Score: 48.25 E-value: 3.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 38 FDSSSATLKPAGAN--TLTGVAMVLKEYPKTaVNVIGYTD-----STGGHDlNMRLSQQRADSVASAL--ITQ--GVDAS 106
Cdd:PRK07034 398 FRTGEATLSEEFINkkNIERLGLALAPWPGD-IEVIGHTDnkpfrSTSGNN-NLKLSAARASVVADKLreSTQinETHQR 475
|
90 100 110
....*....|....*....|....*....|
2N48_A 107 RIRTQGLGPANPIASNSTAEGKAQNRRVEI 136
Cdd:PRK07034 476 EISAIGRGESDPLADNATEEGRKRNRRVDI 505
|
|
| motB |
PRK05996 |
MotB family protein; |
38-138 |
2.88e-05 |
|
MotB family protein;
Pssm-ID: 235665 [Multi-domain] Cd Length: 423 Bit Score: 42.38 E-value: 2.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 38 FDSSSATLKPAGANTLTGVAMVLKEYPKtAVNVIGYTDS---TGGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGL 113
Cdd:PRK05996 318 FAIGSAVPRAELVLAMEKIGQLLAERPG-AVIIRGHTDArpfKSATYDNWRLSTARAQSAYYMLVRGGLDEKRIeQVEGF 396
|
90 100 110
....*....|....*....|....*....|.
2N48_A 114 G------PANPIAsnstaegkAQNRRVEITL 138
Cdd:PRK05996 397 AdrrpklPNDPNA--------AANRRIEILI 419
|
|
| PRK14693 |
PRK14693 |
hypothetical protein; Provisional |
38-136 |
6.56e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 173156 [Multi-domain] Cd Length: 552 Bit Score: 38.59 E-value: 6.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 38 FDSSSATLKPAGANTLTGVAMVLKEYPKTaVNVIGYTDS----TGGHDLNMRLSQQRADSVASAL----ITQGVDASR-- 107
Cdd:PRK14693 376 FDVGKANVRADFMHNIERLGLAFAPWPGD-LEVIGHTDSrpirTSEFPDNQALSEARARNVADELrktaLPGGARAPEna 454
|
90 100 110
....*....|....*....|....*....|...
2N48_A 108 ----IRTQGLGPANPIASNSTAEGKAQNRRVEI 136
Cdd:PRK14693 455 vqrnIEYSGRGDAQPIDTAKTAAAYERNRRVDV 487
|
|
| PRK06778 |
PRK06778 |
hypothetical protein; Validated |
38-136 |
1.48e-03 |
|
hypothetical protein; Validated
Pssm-ID: 235860 [Multi-domain] Cd Length: 289 Bit Score: 37.60 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2N48_A 38 FDSSSATLKPAGANTLTGVAMVLKEYPKTAVnVIGYTDSTGGHDL---NMRLSQQRADSVASALITQGVDASRIrTQGLG 114
Cdd:PRK06778 156 FERGSAQIMPFFKTLLVELAPVFDSLDNKII-ITGHTDAMAYKNNiynNWNLSGDRALSARRVLEEAGMPEDKV-MQVSA 233
|
90 100
....*....|....*....|..
2N48_A 115 PANPIASNSTAEGKAQNRRVEI 136
Cdd:PRK06778 234 MADQMLLDAKNPQSAGNRRIEI 255
|
|
| |
