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Conserved domains on  [gi|134105444|pdb|2OWN|A]
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Chain A, Putative Oleoyl-[acyl-carrier protein] thioesterase

Protein Classification

acyl-[acyl-carrier-protein] thioesterase( domain architecture ID 11467542)

acyl-[acyl-carrier-protein] thioesterase plays an essential role in chain termination during de novo fatty acid synthesis by hydrolyzing an acyl group on a fatty acid

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FatA COG3884
Acyl-ACP thioesterase [Lipid transport and metabolism];
12-257 3.51e-86

Acyl-ACP thioesterase [Lipid transport and metabolism];


:

Pssm-ID: 443092 [Multi-domain]  Cd Length: 242  Bit Score: 256.80  E-value: 3.51e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       12 YSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTE*VQSHGVGWVVTQYAIDITR*PRQDEVVTIAVRGSAY 91
Cdd:COG3884   1 YEKEYRVRYYEVDFNGRLRLPALLNYLQDAATEHAEALGFGIDDLEEKGLAWVLSRYQIEIDRYPRWGEKITVETWPSGY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       92 NPYFAYREFWIRDADGQQLAYITSIWV**SQTTRRIVKILPELVAPYQSEVVKRIPRLPRPISfEATDTTITKPYHVRFF 171
Cdd:COG3884  81 NRFFAYRDFRILDEDGELLARATSIWVLIDLETRRPVRIPDEILEPYGLEEERALPRPPRKLK-KPEDDEEEKEFTVRYS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A      172 DIDPNRHVNNAHYFDWLVDTLPATFLLQHDLVHVDVRYENEVKYGQTVTAHANILPSEVadqvtTSHLIEVDDEK--CCE 249
Cdd:COG3884 160 DIDTNGHVNNARYLEWALDALPLEFLKNHRLKRLEINYLKEVRLGDTVEVRSARDEDGR-----TLHRIVGDDDGkeLAR 234

                ....*...
2OWN_A      250 VTIQWRTL 257
Cdd:COG3884 235 ARIEWRKL 242
 
Name Accession Description Interval E-value
FatA COG3884
Acyl-ACP thioesterase [Lipid transport and metabolism];
12-257 3.51e-86

Acyl-ACP thioesterase [Lipid transport and metabolism];


Pssm-ID: 443092 [Multi-domain]  Cd Length: 242  Bit Score: 256.80  E-value: 3.51e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       12 YSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTE*VQSHGVGWVVTQYAIDITR*PRQDEVVTIAVRGSAY 91
Cdd:COG3884   1 YEKEYRVRYYEVDFNGRLRLPALLNYLQDAATEHAEALGFGIDDLEEKGLAWVLSRYQIEIDRYPRWGEKITVETWPSGY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       92 NPYFAYREFWIRDADGQQLAYITSIWV**SQTTRRIVKILPELVAPYQSEVVKRIPRLPRPISfEATDTTITKPYHVRFF 171
Cdd:COG3884  81 NRFFAYRDFRILDEDGELLARATSIWVLIDLETRRPVRIPDEILEPYGLEEERALPRPPRKLK-KPEDDEEEKEFTVRYS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A      172 DIDPNRHVNNAHYFDWLVDTLPATFLLQHDLVHVDVRYENEVKYGQTVTAHANILPSEVadqvtTSHLIEVDDEK--CCE 249
Cdd:COG3884 160 DIDTNGHVNNARYLEWALDALPLEFLKNHRLKRLEINYLKEVRLGDTVEVRSARDEDGR-----TLHRIVGDDDGkeLAR 234

                ....*...
2OWN_A      250 VTIQWRTL 257
Cdd:COG3884 235 ARIEWRKL 242
Acyl-ACP_TE pfam01643
Acyl-ACP thioesterase; This family consists of various acyl-acyl carrier protein (ACP) ...
11-255 1.09e-68

Acyl-ACP thioesterase; This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.


Pssm-ID: 366738 [Multi-domain]  Cd Length: 248  Bit Score: 212.21  E-value: 1.09e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A         11 LYSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTE-*VQSHGVGWVVTQYAIDITR*PRQDEVVTIAVRGS 89
Cdd:pfam01643   3 VFKRKYDVRFYESDFNGTAKLPALMNLLQDIAADQSEELGLSDDgFFKDYNLVWVVYRYEIDIERLPEFGDMIEIETWAS 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A         90 AYNPYFAYREFWIRDADGQQLAYITSIWV**SQTTRRIVKILPELVAPYQSEVVKRIPRLPRPISFEATDTTITKPYHVR 169
Cdd:pfam01643  83 SYNKFFCYRRFRVYDEKGEKIIEAKSTWVLMDRETRRPHRVPDEIRAPYQSESIEKLIRGPKTKPGKPIEESTEKEYHVR 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A        170 FFDIDPNRHVNNAHYFDWLVDTLPATFLLQHDLVHVDVRYENEVKYGQTVTAHANILPSEvaDQVTTSHLIEVD-DEKCC 248
Cdd:pfam01643 163 YSDIDMNQHVNNVKYLEWILEVLPLDFLDTHEPKKITLKYEKEVQYGDDIEIITESAGSE--EGLKTLHEIRNStGEEIA 240

                  ....*..
2OWN_A        249 EVTIQWR 255
Cdd:pfam01643 241 QARTDWR 247
4HBT cd00586
4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate ...
12-118 2.41e-18

4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).


Pssm-ID: 238329 [Multi-domain]  Cd Length: 110  Bit Score: 78.03  E-value: 2.41e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       12 YSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTE*VQSHGVGWVVTQYAIDITR*PRQDEVVTIAVRGSAY 91
Cdd:cd00586   1 FTLEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLGYDELEEQGLGLVVVELEIDYLRPLRLGDRLTVETRVLRL 80
                        90       100
                ....*....|....*....|....*..
2OWN_A       92 NPYFAYREFWIRDADGQQLAYITSIWV 118
Cdd:cd00586  81 GRKSFTFEQEIFREDGELLATAETVLV 107
PLN02370 PLN02370
acyl-ACP thioesterase
47-212 5.35e-17

acyl-ACP thioesterase


Pssm-ID: 215210 [Multi-domain]  Cd Length: 419  Bit Score: 79.66  E-value: 5.35e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A        47 DALGLTTE*VQSHGVgWVVTQYAIDITR*PRQDEVVTIAVRGSAYNPYFAYREFWIRDAD-GQQLAYITSIWV**SQTTR 125
Cdd:PLN02370 182 DGFGSTPEMSKRNLI-WVVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKtGETLTRASSVWVMMNKLTR 260
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       126 RIVKIlPELV-----------APYQSEVVKRIPRLPrpisfEATDTTITKPYHVRFFDIDPNRHVNNAHYFDWLVDTLPA 194
Cdd:PLN02370 261 RLSKI-PEEVrgeiepyflnsDPVVNEDSRKLPKLD-----DKTADYIRKGLTPRWSDLDVNQHVNNVKYIGWILESAPP 334
                        170
                 ....*....|....*...
2OWN_A       195 TFLLQHDLVHVDVRYENE 212
Cdd:PLN02370 335 PIMESHELAAITLEYRRE 352
 
Name Accession Description Interval E-value
FatA COG3884
Acyl-ACP thioesterase [Lipid transport and metabolism];
12-257 3.51e-86

Acyl-ACP thioesterase [Lipid transport and metabolism];


Pssm-ID: 443092 [Multi-domain]  Cd Length: 242  Bit Score: 256.80  E-value: 3.51e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       12 YSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTE*VQSHGVGWVVTQYAIDITR*PRQDEVVTIAVRGSAY 91
Cdd:COG3884   1 YEKEYRVRYYEVDFNGRLRLPALLNYLQDAATEHAEALGFGIDDLEEKGLAWVLSRYQIEIDRYPRWGEKITVETWPSGY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       92 NPYFAYREFWIRDADGQQLAYITSIWV**SQTTRRIVKILPELVAPYQSEVVKRIPRLPRPISfEATDTTITKPYHVRFF 171
Cdd:COG3884  81 NRFFAYRDFRILDEDGELLARATSIWVLIDLETRRPVRIPDEILEPYGLEEERALPRPPRKLK-KPEDDEEEKEFTVRYS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A      172 DIDPNRHVNNAHYFDWLVDTLPATFLLQHDLVHVDVRYENEVKYGQTVTAHANILPSEVadqvtTSHLIEVDDEK--CCE 249
Cdd:COG3884 160 DIDTNGHVNNARYLEWALDALPLEFLKNHRLKRLEINYLKEVRLGDTVEVRSARDEDGR-----TLHRIVGDDDGkeLAR 234

                ....*...
2OWN_A      250 VTIQWRTL 257
Cdd:COG3884 235 ARIEWRKL 242
Acyl-ACP_TE pfam01643
Acyl-ACP thioesterase; This family consists of various acyl-acyl carrier protein (ACP) ...
11-255 1.09e-68

Acyl-ACP thioesterase; This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.


Pssm-ID: 366738 [Multi-domain]  Cd Length: 248  Bit Score: 212.21  E-value: 1.09e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A         11 LYSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTE-*VQSHGVGWVVTQYAIDITR*PRQDEVVTIAVRGS 89
Cdd:pfam01643   3 VFKRKYDVRFYESDFNGTAKLPALMNLLQDIAADQSEELGLSDDgFFKDYNLVWVVYRYEIDIERLPEFGDMIEIETWAS 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A         90 AYNPYFAYREFWIRDADGQQLAYITSIWV**SQTTRRIVKILPELVAPYQSEVVKRIPRLPRPISFEATDTTITKPYHVR 169
Cdd:pfam01643  83 SYNKFFCYRRFRVYDEKGEKIIEAKSTWVLMDRETRRPHRVPDEIRAPYQSESIEKLIRGPKTKPGKPIEESTEKEYHVR 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A        170 FFDIDPNRHVNNAHYFDWLVDTLPATFLLQHDLVHVDVRYENEVKYGQTVTAHANILPSEvaDQVTTSHLIEVD-DEKCC 248
Cdd:pfam01643 163 YSDIDMNQHVNNVKYLEWILEVLPLDFLDTHEPKKITLKYEKEVQYGDDIEIITESAGSE--EGLKTLHEIRNStGEEIA 240

                  ....*..
2OWN_A        249 EVTIQWR 255
Cdd:pfam01643 241 QARTDWR 247
4HBT cd00586
4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate ...
12-118 2.41e-18

4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).


Pssm-ID: 238329 [Multi-domain]  Cd Length: 110  Bit Score: 78.03  E-value: 2.41e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       12 YSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTE*VQSHGVGWVVTQYAIDITR*PRQDEVVTIAVRGSAY 91
Cdd:cd00586   1 FTLEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLGYDELEEQGLGLVVVELEIDYLRPLRLGDRLTVETRVLRL 80
                        90       100
                ....*....|....*....|....*..
2OWN_A       92 NPYFAYREFWIRDADGQQLAYITSIWV 118
Cdd:cd00586  81 GRKSFTFEQEIFREDGELLATAETVLV 107
PLN02370 PLN02370
acyl-ACP thioesterase
47-212 5.35e-17

acyl-ACP thioesterase


Pssm-ID: 215210 [Multi-domain]  Cd Length: 419  Bit Score: 79.66  E-value: 5.35e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A        47 DALGLTTE*VQSHGVgWVVTQYAIDITR*PRQDEVVTIAVRGSAYNPYFAYREFWIRDAD-GQQLAYITSIWV**SQTTR 125
Cdd:PLN02370 182 DGFGSTPEMSKRNLI-WVVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKtGETLTRASSVWVMMNKLTR 260
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       126 RIVKIlPELV-----------APYQSEVVKRIPRLPrpisfEATDTTITKPYHVRFFDIDPNRHVNNAHYFDWLVDTLPA 194
Cdd:PLN02370 261 RLSKI-PEEVrgeiepyflnsDPVVNEDSRKLPKLD-----DKTADYIRKGLTPRWSDLDVNQHVNNVKYIGWILESAPP 334
                        170
                 ....*....|....*...
2OWN_A       195 TFLLQHDLVHVDVRYENE 212
Cdd:PLN02370 335 PIMESHELAAITLEYRRE 352
FadM COG0824
Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Acyl-CoA thioesterase FadM is ...
158-226 2.54e-09

Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Acyl-CoA thioesterase FadM is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440586 [Multi-domain]  Cd Length: 139  Bit Score: 54.13  E-value: 2.54e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A      158 TDTTITKPYHVRFFDIDPNRHVNNAHYFDWL----VDTLPATFLLQHDL---------VHVDVRYENEVKYGQTVTAHAN 224
Cdd:COG0824   2 TLFTFETPIRVRFGDTDAMGHVNNANYLRYFeearTEFLRALGLSYAELeeegiglvvVEAEIDYLRPARYGDELTVETR 81

                ..
2OWN_A      225 IL 226
Cdd:COG0824  82 VV 83
4HBT cd00586
4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate ...
163-226 3.20e-09

4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).


Pssm-ID: 238329 [Multi-domain]  Cd Length: 110  Bit Score: 53.38  E-value: 3.20e-09
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
2OWN_A      163 TKPYHVRFFDIDPNRHVNNAHYFDWLVDT---------LPATFLLQHDL----VHVDVRYENEVKYGQTVTAHANIL 226
Cdd:cd00586   2 TLEIRVRFGDTDAAGHVNNARYLRYFEEAreeflrelgLGYDELEEQGLglvvVELEIDYLRPLRLGDRLTVETRVL 78
FadM COG0824
Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Acyl-CoA thioesterase FadM is ...
8-136 8.64e-06

Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Acyl-CoA thioesterase FadM is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440586 [Multi-domain]  Cd Length: 139  Bit Score: 44.50  E-value: 8.64e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A        8 NASLYSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTE*VQSHGVGWVVTQYAIDITR*PRQDEVVTIAVR 87
Cdd:COG0824   2 TLFTFETPIRVRFGDTDAMGHVNNANYLRYFEEARTEFLRALGLSYAELEEEGIGLVVVEAEIDYLRPARYGDELTVETR 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
2OWN_A       88 GSAYNPYFAYREFWIRDA-DGQQLAYITSIWV**SQTTRRIVKILPELVA 136
Cdd:COG0824  82 VVRLGGSSLTFEYEIFRAdDGELLATGETVLVFVDLETGRPVPLPDELRA 131
hot_dog cd03440
The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl ...
162-254 1.28e-04

The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.


Pssm-ID: 239524 [Multi-domain]  Cd Length: 100  Bit Score: 40.15  E-value: 1.28e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A      162 ITKPYHVRFFDIDPNRHVNNAHYFDWLVDTLPATFLLQHD------LVHVDVRYENEVKYGQTVTAHANILPSEVADQVT 235
Cdd:cd03440   1 FVLRLTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGGrglgavTLSLDVRFLRPVRPGDTLTVEAEVVRVGRSSVTV 80
                        90
                ....*....|....*....
2OWN_A      236 TSHLIEVDDEKCCEVTIQW 254
Cdd:cd03440  81 EVEVRNEDGKLVATATATF 99
hot_dog cd03440
The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl ...
16-118 4.81e-03

The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.


Pssm-ID: 239524 [Multi-domain]  Cd Length: 100  Bit Score: 35.53  E-value: 4.81e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2OWN_A       16 HRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLtte*vqsHGVGWVVTQYAIDITR*PRQDEVVTIAVRGSAYNPYF 95
Cdd:cd03440   5 LTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGG-------RGLGAVTLSLDVRFLRPVRPGDTLTVEAEVVRVGRSS 77
                        90       100
                ....*....|....*....|...
2OWN_A       96 AYREFWIRDADGQQLAYITSIWV 118
Cdd:cd03440  78 VTVEVEVRNEDGKLVATATATFV 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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