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Conserved domains on  [gi|152149248|pdb|2P7O|A]
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Chain A, Glyoxalase family protein

Protein Classification

fosfomycin resistance hydrolase FosX( domain architecture ID 10170114)

fosfomycin resistance hydrolase FosX catalyzes the hydration of fosfomycin

Gene Symbol:  fosX
Gene Ontology:  GO:0046872

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FosX cd08364
fosfomycin resistant protein subfamily FosX; This subfamily family contains FosX, a fosfomycin ...
2-131 2.12e-87

fosfomycin resistant protein subfamily FosX; This subfamily family contains FosX, a fosfomycin resistant protein. FosX is a Mn(II)-dependent fosfomycin-specific epoxide hydrolase. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.


:

Pssm-ID: 319952  Cd Length: 130  Bit Score: 250.27  E-value: 2.12e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLQERTYNHIAFQIQSEEVDE 81
Cdd:cd08364   1 IEGISHITFIVKDLDRTAAFLTEIFGAEEVYDSGAETFSLSPEKFFLIGGLWIAIMEGEPLLERSYNHIAFKVSEGDLDE 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
2P7O_A       82 YTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEERLKRY 131
Cdd:cd08364  81 YRARIKKLGLEIRPPRSRVQGEGRSLYFYDFDNHLFELHTGTLEERLARY 130
 
Name Accession Description Interval E-value
FosX cd08364
fosfomycin resistant protein subfamily FosX; This subfamily family contains FosX, a fosfomycin ...
2-131 2.12e-87

fosfomycin resistant protein subfamily FosX; This subfamily family contains FosX, a fosfomycin resistant protein. FosX is a Mn(II)-dependent fosfomycin-specific epoxide hydrolase. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.


Pssm-ID: 319952  Cd Length: 130  Bit Score: 250.27  E-value: 2.12e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLQERTYNHIAFQIQSEEVDE 81
Cdd:cd08364   1 IEGISHITFIVKDLDRTAAFLTEIFGAEEVYDSGAETFSLSPEKFFLIGGLWIAIMEGEPLLERSYNHIAFKVSEGDLDE 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
2P7O_A       82 YTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEERLKRY 131
Cdd:cd08364  81 YRARIKKLGLEIRPPRSRVQGEGRSLYFYDFDNHLFELHTGTLEERLARY 130
fosX-Cc NF041542
fosfomycin resistance hydrolase FosXCC; FosXCC (FosX from Campylobacter coli) is rare, mobile ...
4-133 9.00e-52

fosfomycin resistance hydrolase FosXCC; FosXCC (FosX from Campylobacter coli) is rare, mobile antimicrobial resistance protein. Most members of the family are seen not only outside of the genus Campylobacter, but in Gram-positive species such as C. difficile.


Pssm-ID: 469427  Cd Length: 130  Bit Score: 160.18  E-value: 9.00e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A         4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLqERTYNHIAFQIQSEEVDEYT 83
Cdd:NF041542   2 GISHITFIVKDLDKATKFFKEIFEAKEIYSSEDKTFSISKEKFFLINDLWIAVMEGEKI-EKSYNHIAFKIDESDYEMYL 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
2P7O_A        84 ERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEERLKRYHE 133
Cdd:NF041542  81 KRIENLGLEIKSGRKRVIGEGNSIYFYDYDNHLFELHTGTLETRLLRYQK 130
PRK04101 PRK04101
metallothiol transferase FosB;
1-133 1.01e-29

metallothiol transferase FosB;


Pssm-ID: 179740  Cd Length: 139  Bit Score: 104.26  E-value: 1.01e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A         1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSsGDKTfslskeKFFLIAGLWICIMEGDSLQ----ERTYNHIAFQIQS 76
Cdd:PRK04101   1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVK-GRKT------AYFDLNGLWIALNEEKDIPrneiHQSYTHIAFSIEE 73
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
2P7O_A        77 EEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEERLKRYHE 133
Cdd:PRK04101  74 EDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTGTLQDRLNYYKE 130
GloA COG0346
Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family [Secondary ...
4-120 4.32e-18

Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440115 [Multi-domain]  Cd Length: 125  Bit Score: 74.26  E-value: 4.32e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        4 GLSHITLIVKDLNKTTAFLQNIFNAEEI--YSSGDKTFSLskekFFLIAG--LWICIMEGDSLQERT----YNHIAFQIq 75
Cdd:COG0346   2 GLHHVTLRVSDLEASLAFYTDVLGLELVkrTDFGDGGFGH----AFLRLGdgTELELFEAPGAAPAPggggLHHLAFRV- 76
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
2P7O_A       76 sEEVDEYTERIKALGVEMKPErPRVQGEG-RSIYFYDFDNHLFELH 120
Cdd:COG0346  77 -DDLDAAYARLRAAGVEIEGE-PRDRAYGyRSAYFRDPDGNLIELV 120
Glyoxalase pfam00903
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
4-119 2.11e-14

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;


Pssm-ID: 395724 [Multi-domain]  Cd Length: 121  Bit Score: 64.78  E-value: 2.11e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A          4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIM----EGDSLQERTYNHIAFQ-IQSEE 78
Cdd:pfam00903   1 RIDHVALRVGDLEKSLDFYTDVLGFKLVEETDAGEEGGLRSAFFLAGGRVLELLlnetPPPAAAGFGGHHIAFIaFSVDD 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
2P7O_A         79 VDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFEL 119
Cdd:pfam00903  81 VDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 121
 
Name Accession Description Interval E-value
FosX cd08364
fosfomycin resistant protein subfamily FosX; This subfamily family contains FosX, a fosfomycin ...
2-131 2.12e-87

fosfomycin resistant protein subfamily FosX; This subfamily family contains FosX, a fosfomycin resistant protein. FosX is a Mn(II)-dependent fosfomycin-specific epoxide hydrolase. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.


Pssm-ID: 319952  Cd Length: 130  Bit Score: 250.27  E-value: 2.12e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLQERTYNHIAFQIQSEEVDE 81
Cdd:cd08364   1 IEGISHITFIVKDLDRTAAFLTEIFGAEEVYDSGAETFSLSPEKFFLIGGLWIAIMEGEPLLERSYNHIAFKVSEGDLDE 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
2P7O_A       82 YTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEERLKRY 131
Cdd:cd08364  81 YRARIKKLGLEIRPPRSRVQGEGRSLYFYDFDNHLFELHTGTLEERLARY 130
Fosfomycin_RP cd08345
Fosfomycin resistant protein; This family contains three types of fosfomycin resistant protein. ...
7-124 9.58e-71

Fosfomycin resistant protein; This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.


Pssm-ID: 319933  Cd Length: 118  Bit Score: 207.80  E-value: 9.58e-71
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        7 HITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLQERTYNHIAFQIQSEEVDEYTERI 86
Cdd:cd08345   1 HITLIVRDLEKSTAFLQDIFGAREVYSSGDKTFSLSKEKFFLLGGLWIALMEGESLQERSYTHIAFQIQSEDFDRYAERL 80
                        90       100       110
                ....*....|....*....|....*....|....*...
2P7O_A       87 KALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTL 124
Cdd:cd08345  81 GALGVEMRPPRPRVEGEGRSIYFYDPDNHLFELHTGTL 118
fosX-Cc NF041542
fosfomycin resistance hydrolase FosXCC; FosXCC (FosX from Campylobacter coli) is rare, mobile ...
4-133 9.00e-52

fosfomycin resistance hydrolase FosXCC; FosXCC (FosX from Campylobacter coli) is rare, mobile antimicrobial resistance protein. Most members of the family are seen not only outside of the genus Campylobacter, but in Gram-positive species such as C. difficile.


Pssm-ID: 469427  Cd Length: 130  Bit Score: 160.18  E-value: 9.00e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A         4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLqERTYNHIAFQIQSEEVDEYT 83
Cdd:NF041542   2 GISHITFIVKDLDKATKFFKEIFEAKEIYSSEDKTFSISKEKFFLINDLWIAVMEGEKI-EKSYNHIAFKIDESDYEMYL 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
2P7O_A        84 ERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEERLKRYHE 133
Cdd:NF041542  81 KRIENLGLEIKSGRKRVIGEGNSIYFYDYDNHLFELHTGTLETRLLRYQK 130
FosB cd08363
fosfomycin resistant protein subfamily FosB; This subfamily family contains FosB, a fosfomycin ...
5-133 6.73e-32

fosfomycin resistant protein subfamily FosB; This subfamily family contains FosB, a fosfomycin resistant protein. FosB is a Mg(2+)-dependent L-cysteine thiol transferase. Fosfomycin inhibits the enzyme UDP-nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.


Pssm-ID: 319951 [Multi-domain]  Cd Length: 131  Bit Score: 109.75  E-value: 6.73e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        5 LSHITLIVKDLNKTTAFLQNIFNAEeIYSSGDKTfslskeKFFLIAGLWICIMEGDSLQER----TYNHIAFQIQSEEVD 80
Cdd:cd08363   1 INHITFSVSNLNKSIAFYKDVLDAK-LLVLGEKT------AYFDLNGLWLALNVQEDIPRNeishSYTHIAFSIDEEDLD 73
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
2P7O_A       81 EYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEERLKRYHE 133
Cdd:cd08363  74 AFKERLKDNGVNILEGRKRDILEGQSIYFTDPDGHLFELHTGTLEDRLEYYKE 126
PRK04101 PRK04101
metallothiol transferase FosB;
1-133 1.01e-29

metallothiol transferase FosB;


Pssm-ID: 179740  Cd Length: 139  Bit Score: 104.26  E-value: 1.01e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A         1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSsGDKTfslskeKFFLIAGLWICIMEGDSLQ----ERTYNHIAFQIQS 76
Cdd:PRK04101   1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVK-GRKT------AYFDLNGLWIALNEEKDIPrneiHQSYTHIAFSIEE 73
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
2P7O_A        77 EEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEERLKRYHE 133
Cdd:PRK04101  74 EDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTGTLQDRLNYYKE 130
FosA cd07244
fosfomycin resistant protein subfamily FosA; This subfamily family contains FosA, a fosfomycin ...
4-133 2.21e-26

fosfomycin resistant protein subfamily FosA; This subfamily family contains FosA, a fosfomycin resistant protein. FosA is a Mn(II) and K(+)-dependent glutathione transferase. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.


Pssm-ID: 319908 [Multi-domain]  Cd Length: 121  Bit Score: 95.43  E-value: 2.21e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        4 GLSHITLIVKDLNKTTAFLQNI--FNAEEIYSSGdktfslskeKFFLIAGLWICI-MEGDSLQERTYNHIAFQIQSEEVD 80
Cdd:cd07244   1 GINHITLAVSDLERSLAFYVDLlgFKPHVRWDKG---------AYLTAGDLWLCLsLDPAAEPSPDYTHIAFTVSEEDFE 71
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
2P7O_A       81 EYTERIKALGVEMKPERprvQGEGRSIYFYDFDNHLFELHAGTLEERLKRYHE 133
Cdd:cd07244  72 ELSERLRAAGVKIWQEN---SSEGDSLYFLDPDGHKLELHVGSLESRLASLRE 121
GloA COG0346
Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family [Secondary ...
4-120 4.32e-18

Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440115 [Multi-domain]  Cd Length: 125  Bit Score: 74.26  E-value: 4.32e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        4 GLSHITLIVKDLNKTTAFLQNIFNAEEI--YSSGDKTFSLskekFFLIAG--LWICIMEGDSLQERT----YNHIAFQIq 75
Cdd:COG0346   2 GLHHVTLRVSDLEASLAFYTDVLGLELVkrTDFGDGGFGH----AFLRLGdgTELELFEAPGAAPAPggggLHHLAFRV- 76
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
2P7O_A       76 sEEVDEYTERIKALGVEMKPErPRVQGEG-RSIYFYDFDNHLFELH 120
Cdd:COG0346  77 -DDLDAAYARLRAAGVEIEGE-PRDRAYGyRSAYFRDPDGNLIELV 120
VOC cd06587
vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate (VOC) superfamily is composed ...
7-119 1.53e-16

vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.


Pssm-ID: 319898 [Multi-domain]  Cd Length: 112  Bit Score: 69.86  E-value: 1.53e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        7 HITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLskekFFLIAGLWICIMEGDSLQERT---YNHIAFQIQSEEVDEYT 83
Cdd:cd06587   1 HVALRVPDLDASVAFYEEVLGFEVVSRNEGGGFAF----LRLGPGLRLALLEGPEPERPGgggLFHLAFEVDDVDEVDER 76
                        90       100       110
                ....*....|....*....|....*....|....*.
2P7O_A       84 ERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFEL 119
Cdd:cd06587  77 LREAGAEGELVAPPVDDPWGGRSFYFRDPDGNLIEF 112
CatE COG2514
Catechol-2,3-dioxygenase [Secondary metabolites biosynthesis, transport and catabolism];
2-119 1.96e-16

Catechol-2,3-dioxygenase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442004 [Multi-domain]  Cd Length: 141  Bit Score: 70.37  E-value: 1.96e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTfslskekFFLIAG--LWICIMEGDSLQER----TYNHIAFQIQ 75
Cdd:COG2514   1 ITRLGHVTLRVRDLERSAAFYTDVLGLEVVEREGGRV-------YLRADGgeHLLVLEEAPGAPPRpgaaGLDHVAFRVP 73
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
2P7O_A       76 S-EEVDEYTERIKALGVEMKPERPRvqGEGRSIYFYDFDNHLFEL 119
Cdd:COG2514  74 SrADLDAALARLAAAGVPVEGAVDH--GVGESLYFRDPDGNLIEL 116
Glyoxalase pfam00903
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
4-119 2.11e-14

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;


Pssm-ID: 395724 [Multi-domain]  Cd Length: 121  Bit Score: 64.78  E-value: 2.11e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A          4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIM----EGDSLQERTYNHIAFQ-IQSEE 78
Cdd:pfam00903   1 RIDHVALRVGDLEKSLDFYTDVLGFKLVEETDAGEEGGLRSAFFLAGGRVLELLlnetPPPAAAGFGGHHIAFIaFSVDD 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
2P7O_A         79 VDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFEL 119
Cdd:pfam00903  81 VDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 121
GLOD5 cd07253
Human glyoxalase domain-containing protein 5 and similar proteins; Uncharacterized subfamily ...
2-119 4.82e-09

Human glyoxalase domain-containing protein 5 and similar proteins; Uncharacterized subfamily of VOC family contains human glyoxalase domain-containing protein 5 and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.


Pssm-ID: 319916 [Multi-domain]  Cd Length: 123  Bit Score: 50.69  E-value: 4.82e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTfslskekfFLIAG-----LWICIMEG---DSLQERTYNHIAFq 73
Cdd:cd07253   1 IKRLDHLVLTVKDIERTIDFYTKVLGMTVVTFKEGRK--------ALRFGnqkinLHQKGKEFepkASAPTPGSADLCF- 71
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
2P7O_A       74 IQSEEVDEYTERIKALGV--EMKP-ERPRVQGEGRSIYFYDFDNHLFEL 119
Cdd:cd07253  72 ITETPIDEVLEHLEACGVtiEEGPvKRTGALGPILSIYFRDPDGNLIEL 120
VOC COG3324
Lactoylglutathione lyase-related enzyme, vicinal oxygen chelate (VOC) family [General function ...
1-120 4.92e-09

Lactoylglutathione lyase-related enzyme, vicinal oxygen chelate (VOC) family [General function prediction only];


Pssm-ID: 442553 [Multi-domain]  Cd Length: 119  Bit Score: 50.79  E-value: 4.92e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        1 MISGLSHITLIVKDLNKTTAFLQNIFNAE-EIYSSGDKTFSLskekFFLIAGLWICIMEGDSLQERTYNHIAFQiqSEEV 79
Cdd:COG3324   1 MPGTIVWVELPVDDLERAKAFYEEVFGWTfEDDAGPGGDYAE----FDTDGGQVGGLMPGAEEPGGPGWLLYFA--VDDL 74
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
2P7O_A       80 DEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELH 120
Cdd:COG3324  75 DAAVARVEAAGGTVLRPPTDIPPWGRFAVFRDPEGNRFGLW 115
COG3607 COG3607
Lactoylglutathione lyase-related enzyme, vicinal oxygen chelate (VOC) family [General function ...
8-119 1.75e-08

Lactoylglutathione lyase-related enzyme, vicinal oxygen chelate (VOC) family [General function prediction only];


Pssm-ID: 442825  Cd Length: 126  Bit Score: 49.44  E-value: 1.75e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        8 ITLIVKDLNKTTAFLQNI-FNAEEIYSSGDKTFslskekFFLIAGLWICIMEGDSLQE---------RTYN--HIAFQIQ 75
Cdd:COG3607   7 VNLPVADLERSRAFYEALgFTFNPQFSDEGAAC------FVLGEGIVLMLLPREKFATftgkpiadaTGFTevLLALNVE 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
2P7O_A       76 S-EEVDEYTERIKALGVEMkPERPRVQGEGRSIYFYDFDNHLFEL 119
Cdd:COG3607  81 SrEEVDALVAKALAAGGTV-LKPPQDVGGMYSGYFADPDGHLWEV 124
VOC_BsYyaH cd07241
vicinal oxygen chelate (VOC) family protein similar to Bacillus subtilis YyaH; The vicinal ...
5-104 4.23e-08

vicinal oxygen chelate (VOC) family protein similar to Bacillus subtilis YyaH; The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.


Pssm-ID: 319905  Cd Length: 125  Bit Score: 48.17  E-value: 4.23e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        5 LSHITLIVKDLNKTTAFLQNIFNAE--EIYSSGDKTFslskEKFFLI--AGLWICIMEGDSLQ------ERT-YNHIAFQ 73
Cdd:cd07241   2 IEHVALWTNDLERMKDFYVKYFGAEsnDIYHNKKKGF----RSYFLTfdSGARLELMSRPDVTdpdkevERTgLAHIAFS 77
                        90       100       110
                ....*....|....*....|....*....|..
2P7O_A       74 IQS-EEVDEYTERIKALGVEMKPErPRVQGEG 104
Cdd:cd07241  78 VGSkEAVDELTERLRADGYAVVGG-PRTTGDG 108
VOC_like cd08354
uncharacterized subfamily of vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate ...
69-119 8.59e-07

uncharacterized subfamily of vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.


Pssm-ID: 319942  Cd Length: 122  Bit Score: 44.66  E-value: 8.59e-07
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
2P7O_A       69 HIAFQIQSEEVDEYTERIKALGVEMkpERPRVQGEG-RSIYFYDFDNHLFEL 119
Cdd:cd08354  70 HFAFAVPTEELAAWEARLEAKGVPI--ESYTQWPEGgKSLYFRDPAGNLVEL 119
VOC_like cd07251
uncharacterized subfamily of vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate ...
8-119 3.59e-06

uncharacterized subfamily of vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.


Pssm-ID: 319914 [Multi-domain]  Cd Length: 120  Bit Score: 43.05  E-value: 3.59e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        8 ITLIVKDLNKTTAFlqnifnaeeiYSSGDKTFSLSKEK---FFLIAGLWICIMEGDSLQE------RTYNH----IAFQI 74
Cdd:cd07251   2 ITLGVRDLERSARF----------YEALGWKPNLDPNDgvvFFQLGGTVLALYPRDALAEdagvsvTGAGFsgvtLAHNV 71
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
2P7O_A       75 QS-EEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFEL 119
Cdd:cd07251  72 RSrEEVDQLLAKAVAAGGKILKPPQEVFWGGYSGYFADPDGHIWEV 117
Glyoxalase_4 pfam13669
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
7-109 2.73e-05

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;


Pssm-ID: 463951 [Multi-domain]  Cd Length: 109  Bit Score: 40.34  E-value: 2.73e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A          7 HITLIVKDLNKTTAFLQNIFNAEEI--YSSGDKTFSLSkekfFLIAG-------LWICIMEGDSLQERTY--NHIAFQIq 75
Cdd:pfam13669   2 HVGIAVPDLDRALALWGALLGLGPEgdYRSEPQNVDLA----FALLGdgpveveLIQPLDGDSPLARHGPglHHLAYWV- 76
                          90       100       110
                  ....*....|....*....|....*....|....
2P7O_A         76 sEEVDEYTERIKALGVEMKPERPRVQGEGRSIYF 109
Cdd:pfam13669  77 -DDLDAAVARLLDQGYRVAPKGPRAGAAGRRVAF 109
VOC_like cd07254
uncharacterized subfamily of vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate ...
7-97 1.55e-04

uncharacterized subfamily of vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.


Pssm-ID: 319917 [Multi-domain]  Cd Length: 120  Bit Score: 38.60  E-value: 1.55e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        7 HITLIVKDLNKTTAFLQNIFNAEEIYSSGDktfsLSKekfFLIA--GLWICIMEGDSLQERTYNHIAFQIQS-EEVDEYT 83
Cdd:cd07254   4 HLSLNVTDLERSIRFYSDLFGAEPAKRKAD----YAK---FMLEdpPLNLALLVNDRKEPYGLNHLGIQVDSkEEVAALK 76
                        90
                ....*....|....
2P7O_A       84 ERIKALGVEMKPER 97
Cdd:cd07254  77 ARAEAAGLPVRKEP 90
ChaP_like cd08351
ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha), and ...
68-119 3.22e-04

ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha), and similar proteins; ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.


Pssm-ID: 319939  Cd Length: 118  Bit Score: 37.87  E-value: 3.22e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
2P7O_A       68 NHIAFQIQSEEVDEYTERIKALGVE-----MKPERPRV--QGEGRSIYFYDFDNHLFEL 119
Cdd:cd08351  58 QHYAFLVSDDEFDAILARIRARGLEywadpQHREPGEInhNDGGRGVYFRDPDGHLLEI 116
VOC_like cd07264
uncharacterized subfamily of vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate ...
5-120 5.42e-04

uncharacterized subfamily of vicinal oxygen chelate (VOC) family; The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.


Pssm-ID: 319925 [Multi-domain]  Cd Length: 118  Bit Score: 37.31  E-value: 5.42e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        5 LSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLskekfFLIAGLWICI-----MEGDSLQERTYNHIAFQIQSEEV 79
Cdd:cd07264   1 IAYIVLYVDDFAASLRFYRDVLGLPPRFLHEEGEYAE-----FDTGETKLALfsrkeMARSGGPDRRGSAFELGFEVDDV 75
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
2P7O_A       80 DEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELH 120
Cdd:cd07264  76 EATVEELVERGAEFVREPANKPWGQTVAYVRDPDGNLIEIC 116
MMCE cd07249
Methylmalonyl-CoA epimerase (MMCE); MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) ...
5-111 6.54e-04

Methylmalonyl-CoA epimerase (MMCE); MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.


Pssm-ID: 319912 [Multi-domain]  Cd Length: 127  Bit Score: 37.17  E-value: 6.54e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P7O_A        5 LSHITLIVKDLNKTTAFLQNIFNAE--EIYSSGDKTFSLSkekFFLIAGLWICIME---GDS-----LQER--TYNHIAF 72
Cdd:cd07249   1 LDHIGIAVPDLDEALKFYEDVLGVKvsEPEELEEQGVRVA---FLELGNTQIELLEplgEDSpiakfLDKKggGLHHIAF 77
                        90       100       110
                ....*....|....*....|....*....|....*....
2P7O_A       73 qiQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYD 111
Cdd:cd07249  78 --EVDDIDAAVEELKAQGVRLLSEGPRIGAHGKRVAFLH 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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