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Conserved domains on  [gi|185178018|pdb|3CNT|B]
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Chain B, fms1

Protein Classification

NAD(P)/FAD-dependent oxidoreductase( domain architecture ID 12024463)

NAD(P)/FAD-dependent oxidoreductase catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant; similar to flavin-containing L-amino-acid oxidase that catalyzes the oxidative deamination of predominantly hydrophobic and aromatic L-amino acids

CATH:  3.50.50.60
EC:  1.-.-.-
Gene Ontology:  GO:0016491|GO:0009055
PubMed:  10944103
SCOP:  4000128|3000055

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 18-503 1.90e-68

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


:

Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 226.60  E-value: 1.90e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         18 IAGLKAASTLHQNGIqDCLVLEARDRVGGRLQTVTGyQGRKYDIGASWHHDTlTNPLFLEEAQLSLNDgrTRFVFDDDNF 97
Cdd:pfam01593   1 LAGLAAARELLRAGH-DVTVLEARDRVGGRIRTVRD-DGFLIELGAMWFHGA-QPPLLALLKELGLED--RLVLPDPAPF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         98 IYIDEERGRVDHDKellLEIVDNEMSKFAE----LEFHQHLGVSDCSFFQ-------LVMKYLLQRRQFLTNDQIRYLPQ 166
Cdd:pfam01593  76 YTVLFAGGRRYPGD---FRRVPAGWEGLLEfgrlLSIPEKLRLGLAALASdaldefdLDDFSLAESLLFLGRRGPGDVEV 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        167 LCRYLELW-----------HGLDWKLLSAKDTYFGHQGRNAFALN-------YDSVVQRIAQSFPQNWLKLSCEVKSITR 228
Cdd:pfam01593 153 WDRLIDPElfaalpfasgaFAGDPSELSAGLALPLLWALLGEGGSlllprggLGALPDALAAQLLGGDVRLNTRVRSIDR 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        229 EPSKnVTVNCEDGTVYNADYVIITVPQSVLNlsvqpeknlrgRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSN 308
Cdd:pfam01593 233 EGDG-VTVTLTDGEVIEADAVIVTVPLGVLK-----------RILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPD 300

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        309 ESSKivtlanstnefveiVRNAENLDELDSMLeredsqkhTSVTCWSQPLFfvnlskSTGVASFMMLMQAPLTNHIESIr 388
Cdd:pfam01593 301 LGLL--------------GLLSELLTGLGTAF--------SWLTFPNRAPP------GKGLLLLVYVGPGDRARELEGL- 351

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        389 eDKERLFSFFQPVLNKIMKCLDSEDVidgmrpienianankpvlrNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSN 468
Cdd:pfam01593 352 -SDEELLQAVLRDLRKLFGEEAPEPL-------------------RVLVSDWHTDPWPRGSYSLPQYGPGHDDYRPLART 411

                         490       500       510
                  ....*....|....*....|....*....|....*
3CNT_B        469 GqDSRIRFAGEHTIMDGAGCAYGAWESGRREATRI 503
Cdd:pfam01593 412 P-DPGLFFAGEHTSTGYPGTVEGAIESGRRAARAV 445
 
Name Accession Description Interval E-value
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 18-503 1.90e-68

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 226.60  E-value: 1.90e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         18 IAGLKAASTLHQNGIqDCLVLEARDRVGGRLQTVTGyQGRKYDIGASWHHDTlTNPLFLEEAQLSLNDgrTRFVFDDDNF 97
Cdd:pfam01593   1 LAGLAAARELLRAGH-DVTVLEARDRVGGRIRTVRD-DGFLIELGAMWFHGA-QPPLLALLKELGLED--RLVLPDPAPF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         98 IYIDEERGRVDHDKellLEIVDNEMSKFAE----LEFHQHLGVSDCSFFQ-------LVMKYLLQRRQFLTNDQIRYLPQ 166
Cdd:pfam01593  76 YTVLFAGGRRYPGD---FRRVPAGWEGLLEfgrlLSIPEKLRLGLAALASdaldefdLDDFSLAESLLFLGRRGPGDVEV 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        167 LCRYLELW-----------HGLDWKLLSAKDTYFGHQGRNAFALN-------YDSVVQRIAQSFPQNWLKLSCEVKSITR 228
Cdd:pfam01593 153 WDRLIDPElfaalpfasgaFAGDPSELSAGLALPLLWALLGEGGSlllprggLGALPDALAAQLLGGDVRLNTRVRSIDR 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        229 EPSKnVTVNCEDGTVYNADYVIITVPQSVLNlsvqpeknlrgRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSN 308
Cdd:pfam01593 233 EGDG-VTVTLTDGEVIEADAVIVTVPLGVLK-----------RILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPD 300

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        309 ESSKivtlanstnefveiVRNAENLDELDSMLeredsqkhTSVTCWSQPLFfvnlskSTGVASFMMLMQAPLTNHIESIr 388
Cdd:pfam01593 301 LGLL--------------GLLSELLTGLGTAF--------SWLTFPNRAPP------GKGLLLLVYVGPGDRARELEGL- 351

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        389 eDKERLFSFFQPVLNKIMKCLDSEDVidgmrpienianankpvlrNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSN 468
Cdd:pfam01593 352 -SDEELLQAVLRDLRKLFGEEAPEPL-------------------RVLVSDWHTDPWPRGSYSLPQYGPGHDDYRPLART 411

                         490       500       510
                  ....*....|....*....|....*....|....*
3CNT_B        469 GqDSRIRFAGEHTIMDGAGCAYGAWESGRREATRI 503
Cdd:pfam01593 412 P-DPGLFFAGEHTSTGYPGTVEGAIESGRRAARAV 445
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
6-508 2.19e-56

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 194.37  E-value: 2.19e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        6 PAKKKVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGGRLQTVTGYQGRKY-DIGASW---HHDTLTNplFLEEAQL 81
Cdd:COG1231   5 ARGKDVVIVGAGLAGLAAARELRKAGL-DVTVLEARDRVGGRVWTLRFGDDGLYaELGAMRippSHTNLLA--LARELGL 81

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       82 SLNDgrtRFVFDDDNFIYIDEERGRVDH------DKELLLEIVDNEMSKFAELEFHQHLGVSDCSFfqlvmkyllqrRQF 155
Cdd:COG1231  82 PLEP---FPNENGNALLYLGGKRVRAGEiaadlrGVAELLAKLLRALAAALDPWAHPAAELDRESL-----------AEW 147

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      156 LtnDQIRYLPQLCRYLELW----HGLDWKLLSAKDTYFGHQGRNAFALNY------DSVVQRIAQSFPQNWlKLSCEVKS 225
Cdd:COG1231 148 L--RRNGASPSARRLLGLLgageYGADPDELSLLDLLRYAASAGGGAQQFrivggmDQLPRALAAELGDRI-RLGAPVTR 224

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      226 ITREPSKnVTVNCEDGTVYNADYVIITVPQSVLNlsvqpeknlrgRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECC 305
Cdd:COG1231 225 IRQDGDG-VTVTTDDGGTVRADAVIVTVPPSVLR-----------RIEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPF 292

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      306 WsnesskivtlanstnefveivrnaenldeldsmleREDSQkhTSVTCWSQPLFFV------NLSKSTGV-ASFMMlmqa 378
Cdd:COG1231 293 W-----------------------------------EEDGL--YGGISLTDLPIRQtwypsnGPDGGAGVlLGYVG---- 331

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      379 pltnhiesiREDKERLFSffqpvlnkimkcLDSEDVID-GMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGD 457
Cdd:COG1231 332 ---------GDDARALAA------------LSPEERVAaALEQLARIFGVYAAEPVDYVSTDWGRDPWSRGAYAAAPPGQ 390

                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|.
3CNT_B      458 DPVDMvVAMSNGQDsRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLK 508
Cdd:COG1231 391 LTAAG-PALAEPDG-RIHFAGEHTSDEWPGWVEGALESGERAAAEILARLG 439
PLN02268 PLN02268
probable polyamine oxidase
 11-496 9.05e-38

probable polyamine oxidase


Pssm-ID: 177909 [Multi-domain]  Cd Length: 435  Bit Score: 143.67  E-value: 9.05e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        11 VIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGGRLQTVTGYqGRKYDIGASWHHD-TLTNPLFLEEAQLSLNDGRTR 89
Cdd:PLN02268   3 VIVIGGGIAGIAAARALHDASFK-VTLLESRDRIGGRVHTDYSF-GFPVDMGASWLHGvCNENPLAPLIGRLGLPLYRTS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        90 fvfDDDNFIYideergrvDHD---------------KELLLEIVDN-----EMSKFAELEFHQHLGVSDCsfFQLVMKyl 149
Cdd:PLN02268  81 ---GDNSVLY--------DHDlesyalfdmdgnqvpQELVTKVGETferilEETEKVRDEHEEDMSLLQA--ISIVLE-- 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       150 lqRRQFLTNDQIRY-LPQ--LCRyLELWHGLDWKLLSAK--DTYFGHQGRNAFALN-YDSVVQRIAQSFPqnwLKLSCEV 223
Cdd:PLN02268 146 --RHPELRLEGLAHeVLQwyLCR-MEGWFAADADTISLKswDQEELLEGGHGLMVRgYDPVINTLAKGLD---IRLNHRV 219

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       224 KSITREPsKNVTVNCEDGTVYNADYVIITVPQSVLNLSVqpeknlrgrIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEE 303
Cdd:PLN02268 220 TKIVRRY-NGVKVTVEDGTTFVADAAIIAVPLGVLKANI---------IKFEPELPEWKEEAISDLGVGIENKIALHFDS 289

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       304 CCWSNEsskivtlanstnEFVEIVRNaenldeldsmleredsqkhTSVTCWsqplFFVNLSKSTGVASFMMLMQAPLTNH 383
Cdd:PLN02268 290 VFWPNV------------EFLGVVAP-------------------TSYGCS----YFLNLHKATGHPVLVYMPAGRLARD 334

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       384 IESIREDKERLFSFFQpvLNKIMkcldsedvidgmrpieniANANKPVlrNIIVSNWTRDPYSRGAYSaCFPGDDPVDMV 463
Cdd:PLN02268 335 IEKLSDEAAANFAMSQ--LKKML------------------PDATEPV--QYLVSRWGSDPNSLGCYS-YDLVGKPHDLY 391

                        490       500       510
                 ....*....|....*....|....*....|...
3CNT_B       464 VAMSNGQDSrIRFAGEHTIMDGAGCAYGAWESG 496
Cdd:PLN02268 392 ERLRAPVDN-LFFAGEATSSDFPGSVHGAYSTG 423
proto_IX_ox TIGR00562
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ...
 8-51 1.30e-05

protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 213540 [Multi-domain]  Cd Length: 462  Bit Score: 47.52  E-value: 1.30e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
3CNT_B          8 KKKVIIIGAGIAGLKAA---STLHQNGIQDCLVLEARDRVGGRLQTV 51
Cdd:TIGR00562   2 KKHVVIIGGGISGLCAAyylEKEIPELPVELTLVEASDRVGGKIQTV 48
 
Name Accession Description Interval E-value
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 18-503 1.90e-68

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 226.60  E-value: 1.90e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         18 IAGLKAASTLHQNGIqDCLVLEARDRVGGRLQTVTGyQGRKYDIGASWHHDTlTNPLFLEEAQLSLNDgrTRFVFDDDNF 97
Cdd:pfam01593   1 LAGLAAARELLRAGH-DVTVLEARDRVGGRIRTVRD-DGFLIELGAMWFHGA-QPPLLALLKELGLED--RLVLPDPAPF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         98 IYIDEERGRVDHDKellLEIVDNEMSKFAE----LEFHQHLGVSDCSFFQ-------LVMKYLLQRRQFLTNDQIRYLPQ 166
Cdd:pfam01593  76 YTVLFAGGRRYPGD---FRRVPAGWEGLLEfgrlLSIPEKLRLGLAALASdaldefdLDDFSLAESLLFLGRRGPGDVEV 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        167 LCRYLELW-----------HGLDWKLLSAKDTYFGHQGRNAFALN-------YDSVVQRIAQSFPQNWLKLSCEVKSITR 228
Cdd:pfam01593 153 WDRLIDPElfaalpfasgaFAGDPSELSAGLALPLLWALLGEGGSlllprggLGALPDALAAQLLGGDVRLNTRVRSIDR 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        229 EPSKnVTVNCEDGTVYNADYVIITVPQSVLNlsvqpeknlrgRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSN 308
Cdd:pfam01593 233 EGDG-VTVTLTDGEVIEADAVIVTVPLGVLK-----------RILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPD 300

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        309 ESSKivtlanstnefveiVRNAENLDELDSMLeredsqkhTSVTCWSQPLFfvnlskSTGVASFMMLMQAPLTNHIESIr 388
Cdd:pfam01593 301 LGLL--------------GLLSELLTGLGTAF--------SWLTFPNRAPP------GKGLLLLVYVGPGDRARELEGL- 351

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        389 eDKERLFSFFQPVLNKIMKCLDSEDVidgmrpienianankpvlrNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSN 468
Cdd:pfam01593 352 -SDEELLQAVLRDLRKLFGEEAPEPL-------------------RVLVSDWHTDPWPRGSYSLPQYGPGHDDYRPLART 411

                         490       500       510
                  ....*....|....*....|....*....|....*
3CNT_B        469 GqDSRIRFAGEHTIMDGAGCAYGAWESGRREATRI 503
Cdd:pfam01593 412 P-DPGLFFAGEHTSTGYPGTVEGAIESGRRAARAV 445
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
6-508 2.19e-56

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 194.37  E-value: 2.19e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        6 PAKKKVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGGRLQTVTGYQGRKY-DIGASW---HHDTLTNplFLEEAQL 81
Cdd:COG1231   5 ARGKDVVIVGAGLAGLAAARELRKAGL-DVTVLEARDRVGGRVWTLRFGDDGLYaELGAMRippSHTNLLA--LARELGL 81

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       82 SLNDgrtRFVFDDDNFIYIDEERGRVDH------DKELLLEIVDNEMSKFAELEFHQHLGVSDCSFfqlvmkyllqrRQF 155
Cdd:COG1231  82 PLEP---FPNENGNALLYLGGKRVRAGEiaadlrGVAELLAKLLRALAAALDPWAHPAAELDRESL-----------AEW 147

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      156 LtnDQIRYLPQLCRYLELW----HGLDWKLLSAKDTYFGHQGRNAFALNY------DSVVQRIAQSFPQNWlKLSCEVKS 225
Cdd:COG1231 148 L--RRNGASPSARRLLGLLgageYGADPDELSLLDLLRYAASAGGGAQQFrivggmDQLPRALAAELGDRI-RLGAPVTR 224

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      226 ITREPSKnVTVNCEDGTVYNADYVIITVPQSVLNlsvqpeknlrgRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECC 305
Cdd:COG1231 225 IRQDGDG-VTVTTDDGGTVRADAVIVTVPPSVLR-----------RIEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPF 292

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      306 WsnesskivtlanstnefveivrnaenldeldsmleREDSQkhTSVTCWSQPLFFV------NLSKSTGV-ASFMMlmqa 378
Cdd:COG1231 293 W-----------------------------------EEDGL--YGGISLTDLPIRQtwypsnGPDGGAGVlLGYVG---- 331

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      379 pltnhiesiREDKERLFSffqpvlnkimkcLDSEDVID-GMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGD 457
Cdd:COG1231 332 ---------GDDARALAA------------LSPEERVAaALEQLARIFGVYAAEPVDYVSTDWGRDPWSRGAYAAAPPGQ 390

                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|.
3CNT_B      458 DPVDMvVAMSNGQDsRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLK 508
Cdd:COG1231 391 LTAAG-PALAEPDG-RIHFAGEHTSDEWPGWVEGALESGERAAAEILARLG 439
PLN02268 PLN02268
probable polyamine oxidase
 11-496 9.05e-38

probable polyamine oxidase


Pssm-ID: 177909 [Multi-domain]  Cd Length: 435  Bit Score: 143.67  E-value: 9.05e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        11 VIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGGRLQTVTGYqGRKYDIGASWHHD-TLTNPLFLEEAQLSLNDGRTR 89
Cdd:PLN02268   3 VIVIGGGIAGIAAARALHDASFK-VTLLESRDRIGGRVHTDYSF-GFPVDMGASWLHGvCNENPLAPLIGRLGLPLYRTS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        90 fvfDDDNFIYideergrvDHD---------------KELLLEIVDN-----EMSKFAELEFHQHLGVSDCsfFQLVMKyl 149
Cdd:PLN02268  81 ---GDNSVLY--------DHDlesyalfdmdgnqvpQELVTKVGETferilEETEKVRDEHEEDMSLLQA--ISIVLE-- 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       150 lqRRQFLTNDQIRY-LPQ--LCRyLELWHGLDWKLLSAK--DTYFGHQGRNAFALN-YDSVVQRIAQSFPqnwLKLSCEV 223
Cdd:PLN02268 146 --RHPELRLEGLAHeVLQwyLCR-MEGWFAADADTISLKswDQEELLEGGHGLMVRgYDPVINTLAKGLD---IRLNHRV 219

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       224 KSITREPsKNVTVNCEDGTVYNADYVIITVPQSVLNLSVqpeknlrgrIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEE 303
Cdd:PLN02268 220 TKIVRRY-NGVKVTVEDGTTFVADAAIIAVPLGVLKANI---------IKFEPELPEWKEEAISDLGVGIENKIALHFDS 289

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       304 CCWSNEsskivtlanstnEFVEIVRNaenldeldsmleredsqkhTSVTCWsqplFFVNLSKSTGVASFMMLMQAPLTNH 383
Cdd:PLN02268 290 VFWPNV------------EFLGVVAP-------------------TSYGCS----YFLNLHKATGHPVLVYMPAGRLARD 334

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       384 IESIREDKERLFSFFQpvLNKIMkcldsedvidgmrpieniANANKPVlrNIIVSNWTRDPYSRGAYSaCFPGDDPVDMV 463
Cdd:PLN02268 335 IEKLSDEAAANFAMSQ--LKKML------------------PDATEPV--QYLVSRWGSDPNSLGCYS-YDLVGKPHDLY 391

                        490       500       510
                 ....*....|....*....|....*....|...
3CNT_B       464 VAMSNGQDSrIRFAGEHTIMDGAGCAYGAWESG 496
Cdd:PLN02268 392 ERLRAPVDN-LFFAGEATSSDFPGSVHGAYSTG 423
PLN02676 PLN02676
polyamine oxidase
 11-306 1.29e-24

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 106.72  E-value: 1.29e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        11 VIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTvTGYQGRKYDIGASW---HHDTLTNPLFLEEAQLSLndgR 87
Cdd:PLN02676  29 VIIVGAGMSGISAAKTLSEAGIEDILILEATDRIGGRMRK-ANFAGVSVELGANWvegVGGPESNPIWELANKLKL---R 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        88 TrFVFDDDNF---IYiDEERGRVDHDkellleIVDNEMSKF-AELEFHQHLGVSDCSFFQLVMKYLLQRRQFltndqiRY 163
Cdd:PLN02676 105 T-FYSDFDNLssnIY-KQDGGLYPKK------VVQKSMKVAdASDEFGENLSISLSAKKAVDISILTAQRLF------GQ 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       164 LPQlcRYLELwhGLDW-----------KLLSAKDTY-------FGHqgRNAFALN---YDSVVQRIAQSFPQNW------ 216
Cdd:PLN02676 171 VPK--TPLEM--VIDYynydyefaeppRVTSLKNTEpnptfvdFGE--DEYFVADprgYESLVYYLAEQFLSTKsgkitd 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       217 --LKLSCEVKSITRepSKN-VTVNCEDGTVYNADYVIITVPQSVLNLSVqpeknlrgrIEFQPPLKPVIQDAFDKIHFGA 293
Cdd:PLN02676 245 prLKLNKVVREISY--SKNgVTVKTEDGSVYRAKYVIVSVSLGVLQSDL---------IKFKPPLPDWKIEAIYQFDMAV 313

                        330
                 ....*....|...
3CNT_B       294 LGKVIFEFEECCW 306
Cdd:PLN02676 314 YTKIFLKFPYKFW 326
PLN02568 PLN02568
polyamine oxidase
 7-503 4.66e-23

polyamine oxidase


Pssm-ID: 215308 [Multi-domain]  Cd Length: 539  Bit Score: 102.60  E-value: 4.66e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         7 AKK-KVIIIGAGIAGLKAASTLHQNGIQ----DCLVLEARDRVGGRLQTvTGYQGRKYDIGASWHHDTLTNPLFleeaql 81
Cdd:PLN02568   3 AKKpRIVIIGAGMAGLTAANKLYTSSAAndmfELTVVEGGDRIGGRINT-SEFGGERIEMGATWIHGIGGSPVY------ 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        82 slndgrtrfvfdddnfiYIDEERGRVDHDKELllEIVD---NEMSKFAE--LEFHQHLGVSDCSFFQLVMKY----LLQR 152
Cdd:PLN02568  76 -----------------KIAQEAGSLESDEPW--ECMDgfpDRPKTVAEggFEVDPSIVESISTLFRGLMDDaqgkLIEP 136

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       153 RQFLTNDQIRYLPQLCRYLE----------LWHGLD--WKLLSAKDTYFGHQGRN-------AFALN------------- 200
Cdd:PLN02568 137 SEVDEVDFVKLAAKAARVCEsggggsvgsfLRRGLDayWDSVSADEQIKGYGGWSrklleeaIFTMHentqrtytsaddl 216

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       201 ------------------------YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKnVTVNCEDGTVYNADYVIITVPQS 256
Cdd:PLN02568 217 stldlaaeseyrmfpgeeitiakgYLSVIEALASVLPPGTIQLGRKVTRIEWQDEP-VKLHFADGSTMTADHVIVTVSLG 295

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       257 VLNLSVQPEKNLrgrieFQPPLKPVIQDAFDKIHFGALGKVIFEFEEccwSNESSkivtlANSTNEFveivrnaenlDEL 336
Cdd:PLN02568 296 VLKAGIGEDSGL-----FSPPLPDFKTDAISRLGFGVVNKLFVELSP---RPDGS-----PEDVAKF----------PFL 352

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       337 DSMLEREDSQ-KHTSVTCWSQ------PLFfvnlSKSTGVASFMMLMQApltNHIESIREDKerlfsffqpVLNKIMKCL 409
Cdd:PLN02568 353 QMAFHRSDSEaRHDKIPWWMRrtasicPIH----KNSSVLLSWFAGKEA---LELEKLSDEE---------IIRGVQTTL 416

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       410 DS-------EDVIDGMRPIENIANANKPV---LRNIIVSNWTRDPYSRGAYSACF---PGDDPVDMVVAMSNGQDS---- 472
Cdd:PLN02568 417 SSflkrrvaGLGSQSHPLCNGGASSNDGSrwkFVKVLKSKWGTDPLFLGSYSYVAvgsSGDDLDRMAEPLPRISDHdqag 496

                        570       580       590
                 ....*....|....*....|....*....|....*
3CNT_B       473 ----RIRFAGEHTIMDGAGCAYGAWESGRREATRI 503
Cdd:PLN02568 497 gpplQLLFAGEATHRTHYSTTHGAYFSGLREANRL 531
PLN02976 PLN02976
amine oxidase
 8-507 6.66e-19

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 90.70  E-value: 6.66e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B          8 KKKVIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGGRLQTVTGYQGRKYDIGASW----HHDTLT----NPLFLEEA 79
Cdd:PLN02976  693 RKKIIVVGAGPAGLTAARHLQRQGFS-VTVLEARSRIGGRVYTDRSSLSVPVDLGASIitgvEADVATerrpDPSSLICA 771

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         80 QLSLNdgrtRFVFDDDNFIYIDEERGRV--DHDKEL------LLEIVD----------NEMSKFAELEFH------QHLG 135
Cdd:PLN02976  772 QLGLE----LTVLNSDCPLYDVVTGEKVpaDLDEALeaeynsLLDDMVllvaqkgehaMKMSLEDGLEYAlkrrrmPRPG 847

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        136 VS-DCSFFQLVMKYLLQ------RRQFL-TNDQIRYLPQLCRYLELWH--GLDW------KLLS-----AKDTYFGHQGR 194
Cdd:PLN02976  848 VDiDETELGNAADDLYDsastgvDGGHCeKESKEDVLSPLERRVMNWHfaHLEYgcaallKEVSlpywnQDDVYGGFGGA 927

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        195 NAFAL-NYDSVVQRIAQSFPQNWLKLSCEVKSITREPS------KNVTVNCEDGTVYNADYVIITVPQSVLNLSVqpekn 267
Cdd:PLN02976  928 HCMIKgGYSNVVESLAEGLDIHLNHVVTDVSYGSKDAGasgssrKKVKVSTSNGSEFLGDAVLITVPLGCLKAET----- 1002

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        268 lrgrIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSnesskivtlanstnefveivrnaENLDELDSMLEREDSQK 347
Cdd:PLN02976 1003 ----IKFSPPLPDWKYSSIQRLGFGVLNKVVLEFPEVFWD-----------------------DSVDYFGATAEETDLRG 1055

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        348 HtsvtCWsqplFFVNLSKSTGVasfmmlmqapltnhiesiredkerlfsffqPVLnkiMKCLDSEDVIDG--MRPIENIA 425
Cdd:PLN02976 1056 Q----CF----MFWNVKKTVGA------------------------------PVL---IALVVGKAAIDGqsMSSSDHVN 1094

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        426 NAnKPVLRNI------------IVSNWTRDPYSRGAYSacfpgddpvdMVVAMSNGQDSRIR---------FAGEHTIMD 484
Cdd:PLN02976 1095 HA-LMVLRKLfgealvpdpvasVVTDWGRDPFSYGAYS----------YVAIGASGEDYDILgrpvenclfFAGEATCKE 1163

                         570       580
                  ....*....|....*....|...
3CNT_B        485 GAGCAYGAWESGRREATRISDLL 507
Cdd:PLN02976 1164 HPDTVGGAMMSGLREAVRIIDIL 1186
PLN03000 PLN03000
amine oxidase
 6-504 7.12e-19

amine oxidase


Pssm-ID: 178578 [Multi-domain]  Cd Length: 881  Bit Score: 90.46  E-value: 7.12e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         6 PAKKKVIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGGRLQTV---TGYQGRKYDIGASWHHDTLTNPLFLEEAQLS 82
Cdd:PLN03000 182 SSKSSVVIVGAGLSGLAAARQLMRFGFK-VTVLEGRKRPGGRVYTKkmeANRVGAAADLGGSVLTGTLGNPLGIIARQLG 260

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        83 LNDGRTRfvfDDDNFIYIDeerGR-VDHDKELLLEIVDNEM----SKFAEL----EFHQHLGVSDCSFFQLVMKYLLQRR 153
Cdd:PLN03000 261 SSLYKVR---DKCPLYRVD---GKpVDPDVDLKVEVAFNQLldkaSKLRQLmgdvSMDVSLGAALETFRQVSGNDVATEE 334

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       154 QFLTNdqirylpqlcrylelWH---------GLDWKLLSA---KDTYFGHQGRNAFALNYDS-VVQRIAQSFPQNWLKls 220
Cdd:PLN03000 335 MGLFN---------------WHlanleyanaGLVSKLSLAfwdQDDPYDMGGDHCFLPGGNGrLVQALAENVPILYEK-- 397

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       221 cEVKSItREPSKNVTVNCEDgTVYNADYVIITVPQSVLnlsvqpeKNlrGRIEFQPPLKPVIQDAFDKIHFGALGKVIFE 300
Cdd:PLN03000 398 -TVQTI-RYGSNGVKVIAGN-QVYEGDMVLCTVPLGVL-------KN--GSIKFVPELPQRKLDCIKRLGFGLLNKVAML 465

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       301 FEECCWSNEsskivtlanstnefveivrnaenLDELDSMLEREDSQkhtsvtcwSQPLFFVNLSKSTGVASFMMLMQAPL 380
Cdd:PLN03000 466 FPYVFWSTD-----------------------LDTFGHLTEDPNYR--------GEFFLFYSYAPVAGGPLLIALVAGEA 514

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       381 TNHIESIredkerlfsffqPVLNKIMKcldsedVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPV 460
Cdd:PLN03000 515 AHKFETM------------PPTDAVTR------VLHILRGIYEPQGINVPDPLQTVCTRWGGDPFSLGSYSNVAVGASGD 576

                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....
3CNT_B       461 DMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRIS 504
Cdd:PLN03000 577 DYDILAESVGDGRLFFAGEATTRRYPATMHGAFVTGLREAANMA 620
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 8-254 9.82e-18

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 85.65  E-value: 9.82e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        8 KKKVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGGRLQTVTgYQGRKYDIGA-SWH-HDTLTNPLFLEeaqLSLnd 85
Cdd:COG1232   1 MKRVAVIGGGIAGLTAAYRLAKAGH-EVTVLEASDRVGGLIRTVE-VDGFRIDRGPhSFLtRDPEVLELLRE---LGL-- 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       86 grtrfvfdDDNFIYIDEERGRVDHDKELLleivdnEM-SKFAELEFHQHLGVSDCsfFQLVMKYLLQRR---------QF 155
Cdd:COG1232  74 --------GDELVWPNTRKSYIYYGGKLH------PLpQGPLALLRSPLLSLAGK--LRALLELLAPRRppgedeslaEF 137

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      156 LTNdqiRYLPQLCR-----YLELWHGLDWKLLSA-------KDTYFGHQG--RNAFALN---------------YDSVVQ 206
Cdd:COG1232 138 VRR---RFGREVYErlvepLLEGVYAGDPDELSAdwafprlKRLELEHGSliKGALALRkgakagevfgylrggLGTLVE 214

                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
3CNT_B      207 RIAQSFPQNWLKLSCEVKSITREPSKnVTVNCEDGTVYNADYVIITVP 254
Cdd:COG1232 215 ALAEALEAGEIRLGTRVTAIEREGGG-WRVTTSDGETIEADAVVSATP 261
PLN02529 PLN02529
lysine-specific histone demethylase 1
 8-503 2.72e-17

lysine-specific histone demethylase 1


Pssm-ID: 178144 [Multi-domain]  Cd Length: 738  Bit Score: 85.33  E-value: 2.72e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         8 KKKVIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGGRLQTV-TGYQGR--KYDIGASWHHDTLTNPLFLEEAQLSLN 84
Cdd:PLN02529 160 EGSVIIVGAGLAGLAAARQLLSFGFK-VVVLEGRNRPGGRVYTQkMGRKGQfaAVDLGGSVITGIHANPLGVLARQLSIP 238

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        85 DGRTRfvfddDNFIYIDEERGRVDHDKELLLEIVDNEM-SKFAELEFHQHLGVSDCSFFQLvmkyLLQRRQFLTndqiry 163
Cdd:PLN02529 239 LHKVR-----DNCPLYKPDGALVDKEIDSNIEFIFNKLlDKVTELRQIMGGFANDISLGSV----LERLRQLYG------ 303

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       164 lpqLCRYLELWHGLDWKLLSAKDTYFGHQgRNAFALNYDsvvqriaQSFPQ------------NW--LKLSCEVKSITRE 229
Cdd:PLN02529 304 ---VARSTEERQLLDWHLANLEYANAGCL-SDLSAAYWD-------QDDPYemggdhcflaggNWrlINALCEGVPIFYG 372

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       230 PSKNVTVNCEDGT-------VYNADYVIITVPQSVLNlsvqpeknlRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFE 302
Cdd:PLN02529 373 KTVDTIKYGNDGVeviagsqVFQADMVLCTVPLGVLK---------KRTIRFEPELPRRKLAAIDRLGFGLLNKVAMVFP 443

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       303 ECCWSNESSKIVTLANSTNEFVEIVrnaenldeldsmleredsqkhtsvtcwsqpLFFVNLSKSTGVASfmmlmqapltn 382
Cdd:PLN02529 444 SVFWGEELDTFGCLNESSNKRGEFF------------------------------LFYGYHTVSGGPAL----------- 482

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       383 hIESIREDKERLFSFFQP--VLNKIMKCLdsedvidgmRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPV 460
Cdd:PLN02529 483 -VALVAGEAAQRFENTDPstLLHRVLSVL---------RGIYNPKGINVPDPIQTICTRWGSDPLSYGSYSHVRVQSSGS 552

                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....
3CNT_B       461 DM-VVAMSNGqdSRIRFAGEHTIMDGAGCAYGAWESGRREATRI 503
Cdd:PLN02529 553 DYdILAESVS--GRLFFAGEATTRQYPATMHGAFLSGLREASRI 594
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 7-260 3.23e-17

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 84.13  E-value: 3.23e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        7 AKKKVIIIGAGIAGLKAASTLHQNGiQDCLVLEARDRVGGRLQTVTgYQGRKYDIGASWHhdTLTNPL--FLEEAQLsln 84
Cdd:COG1233   2 MMYDVVVIGAGIGGLAAAALLARAG-YRVTVLEKNDTPGGRARTFE-RPGFRFDVGPSVL--TMPGVLerLFRELGL--- 74

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       85 DGRTRFVFDDDNFIYIDEERGRVD--HDKELLLEivdnEMSKFAE------LEFHQHLG-VSDCSFFQLVMKYLLQRRQF 155
Cdd:COG1233  75 EDYLELVPLDPAYRVPFPDGRALDlpRDLERTAA----ELERLFPgdaeayRRFLAELRrLYDALLEDLLYRPLLSLRDL 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      156 LTNDQIRYLPQ---------LCRYLElwhglDWKLLSAKDTYFGHQGRNAF-------ALNYD--------------SVV 205
Cdd:COG1233 151 LRPLALARLLRlllrslrdlLRRYFK-----DPRLRALLAGQALYLGLSPDrtpalyaLIAYLeyaggvwypkggmgALA 225

                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      206 QRIAQSFpQNW---LKLSCEVKSITREPSKNVTVNCEDGTVYNADYVI--ITVPQSVLNL 260
Cdd:COG1233 226 DALARLA-EELggeIRTGAEVERILVEGGRATGVRLADGEEIRADAVVsnADPAHTYLRL 284
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
13-75 1.90e-12

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 62.16  E-value: 1.90e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
3CNT_B         13 IIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGGRLQTVTgYQGRKYDIGASWHHDTLTNPLF 75
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGF-RVLVLEKRDRLGGNAYSYR-VPGYVFDYGAHIFHGSDEPNVR 61
PLN02328 PLN02328
lysine-specific histone demethylase 1 homolog
 8-503 6.82e-12

lysine-specific histone demethylase 1 homolog


Pssm-ID: 215187 [Multi-domain]  Cd Length: 808  Bit Score: 68.09  E-value: 6.82e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         8 KKKVIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGGRLQTVTgYQGRKYDIGASWHHDTLT----NPLFLEEAQLSL 83
Cdd:PLN02328 238 PANVVVVGAGLAGLVAARQLLSMGFK-VVVLEGRARPGGRVKTMK-MKGDGVVAAADLGGSVLTgingNPLGVLARQLGL 315

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        84 NDGRTRfvfdDDNFIYIDEErgrvdhdkelllEIVDNEMSKFAELEFHQHLGvSDCSFFQLVMKYL-------------L 150
Cdd:PLN02328 316 PLHKVR----DICPLYLPDG------------KAVDAEIDSKIEASFNKLLD-RVCKLRQAMIEEVksvdvnlgtaleaF 378

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       151 QRRQFLTNDQIRylpqlcRYLELWHGLDWKLLSA------------KDTYFGHQGRNAFAL-NYDSVVQRIAQSFPQNWL 217
Cdd:PLN02328 379 RHVYKVAEDPQE------RMLLNWHLANLEYANAslmsnlsmaywdQDDPYEMGGDHCFIPgGNDTFVRELAKDLPIFYE 452

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       218 KlscEVKSItREPSKNVTVNCeDGTVYNADYVIITVPQSVLNlsvqpeknlRGRIEFQPPLKPVIQDAFDKIHFGALGKV 297
Cdd:PLN02328 453 R---TVESI-RYGVDGVIVYA-GGQEFHGDMVLCTVPLGVLK---------KGSIEFYPELPQRKKDAIQRLGYGLLNKV 518

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       298 IFEFEECCWSNEsskIVTLANSTNefveivrnaenldelDSMLEREdsqkhtsvtcwsqplFFVNLSKSTgvasfmmLMQ 377
Cdd:PLN02328 519 ALLFPYNFWGGE---IDTFGHLTE---------------DPSMRGE---------------FFLFYSYSS-------VSG 558

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       378 APLTnhIESIREDKERLFSFFQPVlNKIMKCLdseDVIDGMRPIENIANANkPVlrNIIVSNWTRDPYSRGAYSACFPGD 457
Cdd:PLN02328 559 GPLL--IALVAGDAAVKFETLSPV-ESVKRVL---QILRGIFHPKGIVVPD-PV--QAVCTRWGKDCFTYGSYSYVAVGS 629

                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*..
3CNT_B       458 DPVDM-VVAMSNGqDSRIRFAGEHTIMDGAGCAYGAWESGRREATRI 503
Cdd:PLN02328 630 SGDDYdILAESVG-DGRVFFAGEATNKQYPATMHGAFLSGMREAANI 675
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 9-265 7.20e-11

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 64.10  E-value: 7.20e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B         9 KKVIIIGAGIAGLKAASTLHQNGIQ-DCLVLEARDRVGGRLQTVTgYQGRKYDIGA----SWHHDT--LTNPLFLEEAQL 81
Cdd:PRK11883   1 KKVAIIGGGITGLSAAYRLHKKGPDaDITLLEASDRLGGKIQTVR-KDGFPIELGPesflARKPSApaLVKELGLEDELV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        82 SLNDGRtrfvfdddNFIYIDEE-----RGRV-----DHDKELLLEIVDNEMSKFAELEF---HQHLGvSDCSFFQLVmky 148
Cdd:PRK11883  80 ANTTGQ--------SYIYVNGKlhpipPGTVmgiptSIAPFLFAGLVSPIGKLRAAADLrppRWKPG-QDQSVGAFF--- 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       149 llqRRQFlTNDQIRYL----------------------PQLCRYLE----LWHGLDwKLLS----AKDTYFGhqgrnAFA 198
Cdd:PRK11883 148 ---RRRF-GDEVVENLiepllsgiyagdidtlslratfPQLAQAEDkygsLLRGMR-KALPkekkKTKGVFG-----TLK 217

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
3CNT_B       199 LNYDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNcEDGTVYNADYVIITVPQSVL-NLSVQPE 265
Cdd:PRK11883 218 GGLQSLIEALEEKLPAGTIHKGTPVTKIDKSGDGYEIVL-SNGGEIEADAVIVAVPHPVLpSLFVAPP 284
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
7-63 4.07e-10

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 61.05  E-value: 4.07e-10
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
3CNT_B        7 AKKKVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGGRLQTVTGYQGRkYDIGA 63
Cdd:COG3380   2 SMPDIAIIGAGIAGLAAARALQDAGH-EVTVFEKSRGVGGRMATRRLDGGR-FDHGA 56
PRK07208 PRK07208
hypothetical protein; Provisional
 6-62 1.34e-08

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 57.21  E-value: 1.34e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
3CNT_B         6 PAKKKVIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGGRLQTVTgYQGRKYDIG 62
Cdd:PRK07208   2 TNKKSVVIIGAGPAGLTAAYELLKRGYP-VTVLEADPVVGGISRTVT-YKGNRFDIG 56
PLN02576 PLN02576
protoporphyrinogen oxidase
 9-53 1.84e-08

protoporphyrinogen oxidase


Pssm-ID: 215314 [Multi-domain]  Cd Length: 496  Bit Score: 56.94  E-value: 1.84e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
3CNT_B         9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTG 53
Cdd:PLN02576  13 KDVAVVGAGVSGLAAAYALASKHGVNVLVTEARDRVGGNITSVSE 57
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 3-46 7.33e-08

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 54.48  E-value: 7.33e-08
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
3CNT_B        3 TVSPAKKKVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGG 46
Cdd:COG2072   1 TAATEHVDVVVIGAGQAGLAAAYHLRRAGI-DFVVLEKADDVGG 43
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 7-47 5.46e-07

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 51.78  E-value: 5.46e-07
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
3CNT_B        7 AKKKVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGGR 47
Cdd:COG3349   2 MPPRVVVVGGGLAGLAAAVELAEAGF-RVTLLEARPRLGGR 41
PRK07538 PRK07538
hypothetical protein; Provisional
 10-40 3.25e-06

hypothetical protein; Provisional


Pssm-ID: 236046 [Multi-domain]  Cd Length: 413  Bit Score: 49.51  E-value: 3.25e-06
                         10        20        30
                 ....*....|....*....|....*....|.
3CNT_B        10 KVIIIGAGIAGLKAASTLHQNGIqDCLVLEA 40
Cdd:PRK07538   2 KVLIAGGGIGGLTLALTLHQRGI-EVVVFEA 31
Ppro0129 COG2907
Predicted flavin-containing amine oxidase [General function prediction only];
7-62 9.24e-06

Predicted flavin-containing amine oxidase [General function prediction only];


Pssm-ID: 442151 [Multi-domain]  Cd Length: 423  Bit Score: 48.19  E-value: 9.24e-06
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
3CNT_B        7 AKKKVIIIGAGIAGLKAASTLHQNgiQDCLVLEARDRVGGRLQTVT-GYQGRKY--DIG 62
Cdd:COG2907   2 ARMRIAVIGSGISGLTAAWLLSRR--HDVTLFEANDRLGGHTHTVDvDLDGRTVpvDTG 58
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 6-52 9.56e-06

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 47.63  E-value: 9.56e-06
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
3CNT_B        6 PAKKKVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGGRLQTVT 52
Cdd:COG0654   1 MMRTDVLIVGGGPAGLALALALARAGI-RVTVVERAPPPRPDGRGIA 46
proto_IX_ox TIGR00562
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ...
 8-51 1.30e-05

protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 213540 [Multi-domain]  Cd Length: 462  Bit Score: 47.52  E-value: 1.30e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
3CNT_B          8 KKKVIIIGAGIAGLKAA---STLHQNGIQDCLVLEARDRVGGRLQTV 51
Cdd:TIGR00562   2 KKHVVIIGGGISGLCAAyylEKEIPELPVELTLVEASDRVGGKIQTV 48
PRK08243 PRK08243
4-hydroxybenzoate 3-monooxygenase; Validated
 10-47 1.72e-05

4-hydroxybenzoate 3-monooxygenase; Validated


Pssm-ID: 236198 [Multi-domain]  Cd Length: 392  Bit Score: 47.10  E-value: 1.72e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
3CNT_B        10 KVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDR--VGGR 47
Cdd:PRK08243   4 QVAIIGAGPAGLLLGQLLHLAGI-DSVVLERRSReyVEGR 42
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 4-48 1.56e-04

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 44.38  E-value: 1.56e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
3CNT_B         4 VSPAKKKVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGGRL 48
Cdd:PRK12810 139 VKRTGKKVAVVGSGPAGLAAADQLARAGH-KVTVFERADRIGGLL 182
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
7-285 2.63e-04

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 43.36  E-value: 2.63e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B        7 AKKKVIIIGAGIAGLKAASTLHQNGIqDCLVLEaRDRVGGrlqtvtgyqgrkydiGASWH--------HDTLTNPLFLEE 78
Cdd:COG0665   1 ATADVVVIGGGIAGLSTAYHLARRGL-DVTVLE-RGRPGS---------------GASGRnagqlrpgLAALADRALVRL 63

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B       79 AQLSLndgrtRFVFDddnfiYIDEERGRVDHDKELLLEIVDNE--MSKF-AELEFHQHLGVsdcsffqlvmkyllqRRQF 155
Cdd:COG0665  64 AREAL-----DLWRE-----LAAELGIDCDFRRTGVLYLARTEaeLAALrAEAEALRALGL---------------PVEL 118

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CNT_B      156 LTNDQIRylpqlcrylELWHGLDW-KLLSAkdTYFGHQGR-NAFALnydsvVQRIAQSFPQNWLKL--SCEVKSITREPS 231
Cdd:COG0665 119 LDAAELR---------EREPGLGSpDYAGG--LYDPDDGHvDPAKL-----VRALARAARAAGVRIreGTPVTGLEREGG 182

                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
3CNT_B      232 KNVTVNCEDGTVyNADYVIIT--------VPQSVLNLSVQPEKN--LRGRIEFQPPLKPVIQDA 285
Cdd:COG0665 183 RVTGVRTERGTV-RADAVVLAagawsarlLPMLGLRLPLRPVRGyvLVTEPLPDLPLRPVLDDT 245
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 11-46 4.15e-04

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 42.90  E-value: 4.15e-04
                        10        20        30
                ....*....|....*....|....*....|....*.
3CNT_B       11 VIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGG 46
Cdd:COG1053   6 VVVVGSGGAGLRAALEAAEAGL-KVLVLEKVPPRGG 40
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
10-52 6.06e-04

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 42.03  E-value: 6.06e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
3CNT_B       10 KVIIIGAGIAGLKAASTLHQNGIqDCLVLEaRDRVGGRLQTVT 52
Cdd:COG0492   2 DVVIIGAGPAGLTAAIYAARAGL-KTLVIE-GGEPGGQLATTK 42
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
6-48 8.41e-04

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 42.15  E-value: 8.41e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
3CNT_B        6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVlEARDRVGGRL 48
Cdd:COG1148 138 PVNKRALVIGGGIAGMTAALELAEQGYEVYLV-EKEPELGGRA 179
PLN02612 PLN02612
phytoene desaturase
 2-62 8.62e-04

phytoene desaturase


Pssm-ID: 215330 [Multi-domain]  Cd Length: 567  Bit Score: 42.14  E-value: 8.62e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
3CNT_B         2 NTVSPAKK-KVIIIGAGIAGLKAASTLHQNGIQDcLVLEARDRVGGRLQTVTGYQGRKYDIG 62
Cdd:PLN02612  86 SAPRPAKPlKVVIAGAGLAGLSTAKYLADAGHKP-ILLEARDVLGGKVAAWKDEDGDWYETG 146
PRK07233 PRK07233
hypothetical protein; Provisional
 10-46 1.13e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 41.41  E-value: 1.13e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
3CNT_B        10 KVIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGG 46
Cdd:PRK07233   1 KIAIVGGGIAGLAAAYRLAKRGHE-VTVFEADDQLGG 36
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 11-46 1.80e-03

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 40.73  E-value: 1.80e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
3CNT_B         11 VIIIGAGIAGLKAASTLHQNGiQDCLVLEARDRVGG 46
Cdd:pfam00890   2 VLVIGGGLAGLAAALAAAEAG-LKVAVVEKGQPFGG 36
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 8-46 2.07e-03

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 40.55  E-value: 2.07e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
3CNT_B         8 KKKVIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGG 46
Cdd:PRK11749 140 GKKVAVIGAGPAGLTAAHRLARKGYD-VTIFEARDKAGG 177
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 9-46 2.70e-03

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 40.12  E-value: 2.70e-03
                        10        20        30
                ....*....|....*....|....*....|....*...
3CNT_B        9 KKVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGG 46
Cdd:COG0493 122 KKVAVVGSGPAGLAAAYQLARAGH-EVTVFEALDKPGG 158
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 9-47 3.79e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 39.22  E-value: 3.79e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
3CNT_B          9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTCPYGG 39
PRK06753 PRK06753
hypothetical protein; Provisional
 10-41 5.01e-03

hypothetical protein; Provisional


Pssm-ID: 168661 [Multi-domain]  Cd Length: 373  Bit Score: 39.29  E-value: 5.01e-03
                         10        20        30
                 ....*....|....*....|....*....|..
3CNT_B        10 KVIIIGAGIAGLKAASTLHQNGIqDCLVLEAR 41
Cdd:PRK06753   2 KIAIIGAGIGGLTAAALLQEQGH-EVKVFEKN 32
PRK12769 PRK12769
putative oxidoreductase Fe-S binding subunit; Reviewed
 1-48 5.04e-03

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183733 [Multi-domain]  Cd Length: 654  Bit Score: 39.73  E-value: 5.04e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
3CNT_B         1 MNTVSPAKKKVIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVGGRL 48
Cdd:PRK12769 320 LSQVTKSDKRVAIIGAGPAGLACADVLARNGVA-VTVYDRHPEIGGLL 366
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 5-45 5.40e-03

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 39.47  E-value: 5.40e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
3CNT_B         5 SPAKKKVIIIGAGIAGLKAASTLHQNGIQdCLVLEARDRVG 45
Cdd:PRK08132  20 DPARHPVVVVGAGPVGLALAIDLAQQGVP-VVLLDDDDTLS 59
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 10-83 7.15e-03

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 38.53  E-value: 7.15e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
3CNT_B         10 KVIIIGAGIAGLKAASTLHQNGIqDCLVLEARDRVGGrlqtvtgyqgrkydiGASWH-----HDTLTNPLFLEEAQLSL 83
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGL-SVTLLERGDDPGS---------------GASGRnagliHPGLRYLEPSELARLAL 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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