|
Name |
Accession |
Description |
Interval |
E-value |
| MAGE |
pfam01454 |
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ... |
474-642 |
1.06e-19 |
|
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.
:
Pssm-ID: 426270 Cd Length: 205 Bit Score: 88.48 E-value: 1.06e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 474 LLQFLLLKDQTKYPIKESEMREFIVQEY-RNQFPEILRRAAAHLECIFRFELKELDPEEH-------------------- 532
Cdd:pfam01454 1 LVRYALACEYQRTPIRREDISKKVLGENrKRLFKKVFEEAQKILRDVFGMELVELPAKEEkkttvtsqqrraaakssrsk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 533 TYILLNKL----------GPVPF-EGLEDIPNGPKMGLLMMILGQIFLNGNQAREADIWEMLWRFGVQRERRL---SVFG 598
Cdd:pfam01454 81 SYILVSTLppeyrvpaiiWPSKApSFVLDQDEATYTGILTVILSLILLSGGSISEQELLRYLRRLGIDTDGTKeipPLNG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 322518377 599 NPKRLLSvEFVWQRYLDYR--PITDCVPVEYEFYWGPRSHVETTKM 642
Cdd:pfam01454 161 NTDDLLK-RLVKQGYLVRTkeGASDDGEEIIEYRVGPRAKVEFGPE 205
|
|
| MAGE super family |
cl03220 |
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ... |
728-888 |
1.84e-13 |
|
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.
The actual alignment was detected with superfamily member pfam01454:
Pssm-ID: 426270 Cd Length: 205 Bit Score: 70.38 E-value: 1.84e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 728 LVQLFLLMDSTKLPIPKKGILYYIGRECSKV-FPDLLNRAARTLNHVYGTELVVLDPRNH-------------------- 786
Cdd:pfam01454 1 LVRYALACEYQRTPIRREDISKKVLGENRKRlFKKVFEEAQKILRDVFGMELVELPAKEEkkttvtsqqrraaakssrsk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 787 SYTLYN-----------RREMEDMEEIMDSPNRPGNNFLMQVLSFIFIMGNHARESAVWAFLRGLGV---QNGRKHVITC 852
Cdd:pfam01454 81 SYILVStlppeyrvpaiIWPSKAPSFVLDQDEATYTGILTVILSLILLSGGSISEQELLRYLRRLGIdtdGTKEIPPLNG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 322518377 853 -------RYLSQRYIDSLRVPDSDP--VQYDFVWGPRARLETSKM 888
Cdd:pfam01454 161 ntddllkRLVKQGYLVRTKEGASDDgeEIIEYRVGPRAKVEFGPE 205
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
26-321 |
3.39e-08 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.03 E-value: 3.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 26 RPAAVPGPAVPRDRSDPQilqglgatEGPGTSVLPTPRGGSSTSVPPTASEGSSAPGQLitsEGRNTSQLPTSRKGRGTR 105
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDR--------GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEP---DPHPPPTVPPPERPRDDP 2656
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 106 RPPAVSAGLNAAASITASEGASTPVLPTAPKGSKASEHLTisegaSISEQPQSHEGPNVQPTlGEGSGTSVPPTFSEESG 185
Cdd:PHA03247 2657 APGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLT-----SLADPPPPPPTPEPAPH-ALVSATPLPPGPAAARQ 2730
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 186 ISEPLPSGEGLSISVSPTISEGAGINEPSPASKA-PSTSVPPTASNG---LGINLPPTSSEGLSISVLFSASEESDISVP 261
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAGPATPGGPARPARPPTTAgPPAPAPPAAPAAgppRRLTRPAVASLSESRESLPSPWDPADPPAA 2810
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 262 ------------------PPSAEGLSTSMPPPSGEVQstwvPPIILEGCSVKVRSTSRKG------------RRTPVRSA 311
Cdd:PHA03247 2811 vlapaaalppaaspagplPPPTSAQPTAPPPPPGPPP----PSLPLGGSVAPGGDVRRRPpsrspaakpaapARPPVRRL 2886
|
330
....*....|
gi 322518377 312 ACESPSPSAE 321
Cdd:PHA03247 2887 ARPAVSRSTE 2896
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MAGE |
pfam01454 |
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ... |
474-642 |
1.06e-19 |
|
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.
Pssm-ID: 426270 Cd Length: 205 Bit Score: 88.48 E-value: 1.06e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 474 LLQFLLLKDQTKYPIKESEMREFIVQEY-RNQFPEILRRAAAHLECIFRFELKELDPEEH-------------------- 532
Cdd:pfam01454 1 LVRYALACEYQRTPIRREDISKKVLGENrKRLFKKVFEEAQKILRDVFGMELVELPAKEEkkttvtsqqrraaakssrsk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 533 TYILLNKL----------GPVPF-EGLEDIPNGPKMGLLMMILGQIFLNGNQAREADIWEMLWRFGVQRERRL---SVFG 598
Cdd:pfam01454 81 SYILVSTLppeyrvpaiiWPSKApSFVLDQDEATYTGILTVILSLILLSGGSISEQELLRYLRRLGIDTDGTKeipPLNG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 322518377 599 NPKRLLSvEFVWQRYLDYR--PITDCVPVEYEFYWGPRSHVETTKM 642
Cdd:pfam01454 161 NTDDLLK-RLVKQGYLVRTkeGASDDGEEIIEYRVGPRAKVEFGPE 205
|
|
| MAGE |
pfam01454 |
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ... |
728-888 |
1.84e-13 |
|
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.
Pssm-ID: 426270 Cd Length: 205 Bit Score: 70.38 E-value: 1.84e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 728 LVQLFLLMDSTKLPIPKKGILYYIGRECSKV-FPDLLNRAARTLNHVYGTELVVLDPRNH-------------------- 786
Cdd:pfam01454 1 LVRYALACEYQRTPIRREDISKKVLGENRKRlFKKVFEEAQKILRDVFGMELVELPAKEEkkttvtsqqrraaakssrsk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 787 SYTLYN-----------RREMEDMEEIMDSPNRPGNNFLMQVLSFIFIMGNHARESAVWAFLRGLGV---QNGRKHVITC 852
Cdd:pfam01454 81 SYILVStlppeyrvpaiIWPSKAPSFVLDQDEATYTGILTVILSLILLSGGSISEQELLRYLRRLGIdtdGTKEIPPLNG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 322518377 853 -------RYLSQRYIDSLRVPDSDP--VQYDFVWGPRARLETSKM 888
Cdd:pfam01454 161 ntddllkRLVKQGYLVRTKEGASDDgeEIIEYRVGPRAKVEFGPE 205
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
26-321 |
3.39e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.03 E-value: 3.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 26 RPAAVPGPAVPRDRSDPQilqglgatEGPGTSVLPTPRGGSSTSVPPTASEGSSAPGQLitsEGRNTSQLPTSRKGRGTR 105
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDR--------GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEP---DPHPPPTVPPPERPRDDP 2656
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 106 RPPAVSAGLNAAASITASEGASTPVLPTAPKGSKASEHLTisegaSISEQPQSHEGPNVQPTlGEGSGTSVPPTFSEESG 185
Cdd:PHA03247 2657 APGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLT-----SLADPPPPPPTPEPAPH-ALVSATPLPPGPAAARQ 2730
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 186 ISEPLPSGEGLSISVSPTISEGAGINEPSPASKA-PSTSVPPTASNG---LGINLPPTSSEGLSISVLFSASEESDISVP 261
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAGPATPGGPARPARPPTTAgPPAPAPPAAPAAgppRRLTRPAVASLSESRESLPSPWDPADPPAA 2810
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 262 ------------------PPSAEGLSTSMPPPSGEVQstwvPPIILEGCSVKVRSTSRKG------------RRTPVRSA 311
Cdd:PHA03247 2811 vlapaaalppaaspagplPPPTSAQPTAPPPPPGPPP----PSLPLGGSVAPGGDVRRRPpsrspaakpaapARPPVRRL 2886
|
330
....*....|
gi 322518377 312 ACESPSPSAE 321
Cdd:PHA03247 2887 ARPAVSRSTE 2896
|
|
| Nucleoporin_FG2 |
pfam15967 |
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ... |
47-262 |
3.16e-04 |
|
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain] Cd Length: 586 Bit Score: 44.66 E-value: 3.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 47 GLGATEGPGTSVlptprgGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGT-RRPPAVSAGLNAAASITASEG 125
Cdd:pfam15967 11 GSTATAGGGFSF------GAAAASNPGSTGGFSFGTLGAAPAATATTTTATLGLGGGLfGQKPATGFTFGTPASSTAATG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 126 AS-----TPVLPTA-----------PKGSKASEHLTISEGAS---------ISEQPQSHEGPNvqpTLGEGSGTSVPPTF 180
Cdd:pfam15967 85 PTgltlgTPAATTAastgfslgfnkPAASATPFSLPASSTSGgglslgsvlTSTAAQQGATGF---TLNLGGTPATTTAV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 181 SEESGISEPLPS-GEGLSISVSPT-ISEGAGINEPSPASKAPSTSvpPTASNGLGINLPPTSSEGLSISVLFSASEES-- 256
Cdd:pfam15967 162 STGLSLGSTLTSlGGSLFQNTNSTgLGQTTLGLTLLATSTAPVSA--PAASEGLGGLDFSTSSEKKSDKASGTRPEDSka 239
|
....*...
gi 322518377 257 --DISVPP 262
Cdd:pfam15967 240 lkDENLPP 247
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
25-237 |
4.08e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.89 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 25 GRPAAVPGPAVPRDRSDPQILQGLGATEGPGTSVLPTPRGGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGT 104
Cdd:COG3469 4 VSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATAT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 105 R-RPPAVSAGLNAAASITASEGASTPVLPTAPKGSKASehltiSEGASISEQPQSHEGPNVQPTLGEGS--GTSVPPTFS 181
Cdd:COG3469 84 AaAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGS-----VTSTTSSTAGSTTTSGASATSSAGSTttTTTVSGTET 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 322518377 182 EESGISEPLPSGEGLSISVSPTISEGAGINEPSPASkAPSTSVPPTASNGLGINLP 237
Cdd:COG3469 159 ATGGTTTTSTTTTTTSASTTPSATTTATATTASGAT-TPSATTTATTTGPPTPGLP 213
|
|
| ser_rich_anae_1 |
NF033849 |
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ... |
46-208 |
4.56e-03 |
|
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.
Pssm-ID: 468206 [Multi-domain] Cd Length: 1122 Bit Score: 40.76 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 46 QGLGATEGPGTSvlpTPRGGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGTRRPPAVSAGLnaaaSITASEG 125
Cdd:NF033849 409 ASQGGSEGWGSG---DSVQSVSQSYGSSSSTGTSSGHSDSSSHSTSSGQADSVSQGTSWSEGTGTSQGQ----SVGTSES 481
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 126 ASTPVLPTAPKGSKASEHLTISEGASISEqpqshegpnvqpTLGEGSGTSVpptfSEESGISeplpSGEGLSISVSPTIS 205
Cdd:NF033849 482 WSTSQSETDSVGDSTGTSESVSQGDGRST------------GRSESQGTSL----GTSGGRT----SGAGGSMGLGPSIS 541
|
...
gi 322518377 206 EGA 208
Cdd:NF033849 542 LGK 544
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MAGE |
pfam01454 |
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ... |
474-642 |
1.06e-19 |
|
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.
Pssm-ID: 426270 Cd Length: 205 Bit Score: 88.48 E-value: 1.06e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 474 LLQFLLLKDQTKYPIKESEMREFIVQEY-RNQFPEILRRAAAHLECIFRFELKELDPEEH-------------------- 532
Cdd:pfam01454 1 LVRYALACEYQRTPIRREDISKKVLGENrKRLFKKVFEEAQKILRDVFGMELVELPAKEEkkttvtsqqrraaakssrsk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 533 TYILLNKL----------GPVPF-EGLEDIPNGPKMGLLMMILGQIFLNGNQAREADIWEMLWRFGVQRERRL---SVFG 598
Cdd:pfam01454 81 SYILVSTLppeyrvpaiiWPSKApSFVLDQDEATYTGILTVILSLILLSGGSISEQELLRYLRRLGIDTDGTKeipPLNG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 322518377 599 NPKRLLSvEFVWQRYLDYR--PITDCVPVEYEFYWGPRSHVETTKM 642
Cdd:pfam01454 161 NTDDLLK-RLVKQGYLVRTkeGASDDGEEIIEYRVGPRAKVEFGPE 205
|
|
| MAGE |
pfam01454 |
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ... |
728-888 |
1.84e-13 |
|
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.
Pssm-ID: 426270 Cd Length: 205 Bit Score: 70.38 E-value: 1.84e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 728 LVQLFLLMDSTKLPIPKKGILYYIGRECSKV-FPDLLNRAARTLNHVYGTELVVLDPRNH-------------------- 786
Cdd:pfam01454 1 LVRYALACEYQRTPIRREDISKKVLGENRKRlFKKVFEEAQKILRDVFGMELVELPAKEEkkttvtsqqrraaakssrsk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 787 SYTLYN-----------RREMEDMEEIMDSPNRPGNNFLMQVLSFIFIMGNHARESAVWAFLRGLGV---QNGRKHVITC 852
Cdd:pfam01454 81 SYILVStlppeyrvpaiIWPSKAPSFVLDQDEATYTGILTVILSLILLSGGSISEQELLRYLRRLGIdtdGTKEIPPLNG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 322518377 853 -------RYLSQRYIDSLRVPDSDP--VQYDFVWGPRARLETSKM 888
Cdd:pfam01454 161 ntddllkRLVKQGYLVRTKEGASDDgeEIIEYRVGPRAKVEFGPE 205
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
26-321 |
3.39e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.03 E-value: 3.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 26 RPAAVPGPAVPRDRSDPQilqglgatEGPGTSVLPTPRGGSSTSVPPTASEGSSAPGQLitsEGRNTSQLPTSRKGRGTR 105
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDR--------GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEP---DPHPPPTVPPPERPRDDP 2656
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 106 RPPAVSAGLNAAASITASEGASTPVLPTAPKGSKASEHLTisegaSISEQPQSHEGPNVQPTlGEGSGTSVPPTFSEESG 185
Cdd:PHA03247 2657 APGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLT-----SLADPPPPPPTPEPAPH-ALVSATPLPPGPAAARQ 2730
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 186 ISEPLPSGEGLSISVSPTISEGAGINEPSPASKA-PSTSVPPTASNG---LGINLPPTSSEGLSISVLFSASEESDISVP 261
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAGPATPGGPARPARPPTTAgPPAPAPPAAPAAgppRRLTRPAVASLSESRESLPSPWDPADPPAA 2810
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 262 ------------------PPSAEGLSTSMPPPSGEVQstwvPPIILEGCSVKVRSTSRKG------------RRTPVRSA 311
Cdd:PHA03247 2811 vlapaaalppaaspagplPPPTSAQPTAPPPPPGPPP----PSLPLGGSVAPGGDVRRRPpsrspaakpaapARPPVRRL 2886
|
330
....*....|
gi 322518377 312 ACESPSPSAE 321
Cdd:PHA03247 2887 ARPAVSRSTE 2896
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
27-358 |
1.07e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.87 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 27 PAAVPGPAVPRDRSDPQILQGLGATEGPGTSVLPtprgGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGTRR 106
Cdd:PHA03307 122 PPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAA----GASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPST 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 107 PPAVSAGLNAAASITASEGASTPVlPTAPKGSKASEHLTiSEGASISEQPQSHEGP-NVQPTLGEGSGTSVPPTFSEESG 185
Cdd:PHA03307 198 PPAAASPRPPRRSSPISASASSPA-PAPGRSAADDAGAS-SSDSSSSESSGCGWGPeNECPLPRPAPITLPTRIWEASGW 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 186 ISEPlpsgeglsiSVSPTISEGAGINEPSPASKAPSTSVPPTASnglginlPPTSSEGLSISvlfSASEESDISVPPPSA 265
Cdd:PHA03307 276 NGPS---------SRPGPASSSSSPRERSPSPSPSSPGSGPAPS-------SPRASSSSSSS---RESSSSSTSSSSESS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 266 EGLSTSMPPPSGEVQSTWVPPIILEGCSVKVRSTSRKGRRTPVRSAA-CESPSPSAECLSTSLSSISAEGFCSSLAPCAE 344
Cdd:PHA03307 337 RGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGrPTRRRARAAVAGRARRRDATGRFPAGRPRPSP 416
|
330
....*....|....*
gi 322518377 345 -GSDTCELLPCGEGP 358
Cdd:PHA03307 417 lDAGAASGAFYARYP 431
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
22-286 |
9.08e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.94 E-value: 9.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 22 SGKGRPAAVPGPAV-PRDRSDPQI---LQGLGATEGPGTSVLPTPRGGSS-TSVPP-TASEGSSAPGQLITSEGRNTSQL 95
Cdd:PHA03247 2668 RRLGRAAQASSPPQrPRRRAARPTvgsLTSLADPPPPPPTPEPAPHALVSaTPLPPgPAAARQASPALPAAPAPPAVPAG 2747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 96 PTSRKGRGTRRPPAVSAGLNAAASITASEGASTPVLPTAPKGSKASEHLTISEGASISEQPQSHEGPN-VQPTLGEGSGT 174
Cdd:PHA03247 2748 PATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAaALPPAASPAGP 2827
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 175 SVPPTFSEE---SGISEPLPSGEGLSISVSPtiseGAGINEPSPASKAPSTSVPPTASNGLGINLPPTSSEGLSIsvlfs 251
Cdd:PHA03247 2828 LPPPTSAQPtapPPPPGPPPPSLPLGGSVAP----GGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESF----- 2898
|
250 260 270
....*....|....*....|....*....|....*
gi 322518377 252 aSEESDISVPPPSAEGLSTSMPPPSGEVQSTWVPP 286
Cdd:PHA03247 2899 -ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPP 2932
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
25-334 |
1.43e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.01 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 25 GRPAAVPGPAVPRDRSDPQILQGLGATEGPGTSVLPTPRGGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGT 104
Cdd:PHA03307 38 GSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 105 RRPPAVSAGLNAAASITASEGASTPVLPTAPKGSKASEHLtiSEGASISEQPQSHEGPNVQPTLGEGSGTSVPPtfSEES 184
Cdd:PHA03307 118 PPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGA--SPAAVASDAASSRQAALPLSSPEETARAPSSP--PAEP 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 185 GISEPLPSGEGLSISVSPTISEGAGINEPSP----ASKAPSTSVPPTASNGLGINLPPTSSEGLSISVLFSASEESDISV 260
Cdd:PHA03307 194 PPSTPPAAASPRPPRRSSPISASASSPAPAPgrsaADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEAS 273
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 322518377 261 PPPSAEGLSTSMPPPSGEVQSTWVPPIILEGCSVKVRSTSRKGRRTPVRSAACESPSPSAECLSTSLSSISAEG 334
Cdd:PHA03307 274 GWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSP 347
|
|
| Nucleoporin_FG2 |
pfam15967 |
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ... |
47-262 |
3.16e-04 |
|
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain] Cd Length: 586 Bit Score: 44.66 E-value: 3.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 47 GLGATEGPGTSVlptprgGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGT-RRPPAVSAGLNAAASITASEG 125
Cdd:pfam15967 11 GSTATAGGGFSF------GAAAASNPGSTGGFSFGTLGAAPAATATTTTATLGLGGGLfGQKPATGFTFGTPASSTAATG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 126 AS-----TPVLPTA-----------PKGSKASEHLTISEGAS---------ISEQPQSHEGPNvqpTLGEGSGTSVPPTF 180
Cdd:pfam15967 85 PTgltlgTPAATTAastgfslgfnkPAASATPFSLPASSTSGgglslgsvlTSTAAQQGATGF---TLNLGGTPATTTAV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 181 SEESGISEPLPS-GEGLSISVSPT-ISEGAGINEPSPASKAPSTSvpPTASNGLGINLPPTSSEGLSISVLFSASEES-- 256
Cdd:pfam15967 162 STGLSLGSTLTSlGGSLFQNTNSTgLGQTTLGLTLLATSTAPVSA--PAASEGLGGLDFSTSSEKKSDKASGTRPEDSka 239
|
....*...
gi 322518377 257 --DISVPP 262
Cdd:pfam15967 240 lkDENLPP 247
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
22-321 |
7.69e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 7.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 22 SGKGRPAAVPGPAVPRDRSDPqilqGLGATEGPGTSVLPtPRGGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKG 101
Cdd:PRK07003 363 TGGGAPGGGVPARVAGAVPAP----GARAAAAVGASAVP-AVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATAD 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 102 RGTR---RPPAVSAGLNAAASITASEGASTPVLPTAPKGSKAsehltisegasiseqPQSHEGPnvqPTLGEGSGTSVPP 178
Cdd:PRK07003 438 RGDDaadGDAPVPAKANARASADSRCDERDAQPPADSGSASA---------------PASDAPP---DAAFEPAPRAAAP 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 179 TFSEESGISEPLPSgeglsiSVSPTISEGAGINEPSP--ASKAPSTSVPPTASNGLGINLPPTSSEGLSISVlfSASEES 256
Cdd:PRK07003 500 SAATPAAVPDARAP------AAASREDAPAAAAPPAPeaRPPTPAAAAPAARAGGAAAALDVLRNAGMRVSS--DRGARA 571
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 322518377 257 DISVPPPSAEGLSTSMPPPSGEVQstwVPpiilegcsvkvrsTSRKGRRTPVRSAACESPSPSAE 321
Cdd:PRK07003 572 AAAAKPAAAPAAAPKPAAPRVAVQ---VP-------------TPRARAATGDAPPNGAARAEQAA 620
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
31-287 |
1.41e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 42.45 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 31 PGPAVPRD-RSDPQILQGLGATEGpgtsvLPTPRGGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGTRRPPA 109
Cdd:pfam03154 274 QMPPMPHSlQTGPSHMQHPVPPQP-----FPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPA 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 110 VSaglnAAASITASEGASTPVLPTaPKGSKASEHLT----ISEGASISEQP--------QSHEGPNVQPtlgegsgtsvP 177
Cdd:pfam03154 349 PL----SMPHIKPPPTTPIPQLPN-PQSHKHPPHLSgpspFQMNSNLPPPPalkplsslSTHHPPSAHP----------P 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 178 PTFSEESGISEPLPSGEGLSISVSPTISEGAGiNEPSPASKAPSTSVPPTASNGLginLPPTSSEGLSISVLFSASEESD 257
Cdd:pfam03154 414 PLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAA-SHPPTSGLHQVPSQSPFPQHPF---VPGGPPPITPPSGPPTSTSSAM 489
|
250 260 270
....*....|....*....|....*....|
gi 322518377 258 ISVPPPSAEGLSTSMPPPSgeVQSTWVPPI 287
Cdd:pfam03154 490 PGIQPPSSASVSSSGPVPA--AVSCPLPPV 517
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
27-285 |
1.65e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 27 PAAVPGPAVPRDRSDPQIlQGLGATEGPGTSVLPTPRGGSSTSVPPTAS-EGSSAPGqlitsegrntsqlptsrkGRGTR 105
Cdd:PHA03247 2804 PADPPAAVLAPAAALPPA-ASPAGPLPPPTSAQPTAPPPPPGPPPPSLPlGGSVAPG------------------GDVRR 2864
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 106 RPPAVSAglnaaasitasegASTPVLPTAPKGSKASEhltisegASISEQPQSHEGPNVQPTLGEGSGTSVPPTFSEESG 185
Cdd:PHA03247 2865 RPPSRSP-------------AAKPAAPARPPVRRLAR-------PAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPP 2924
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 186 ISE---PLPSGEGLSISVSPTISEGAGINEPSPASKAPSTSVPPTASNGLGINLPPTSSEGLSISvlfSASEESDISVPP 262
Cdd:PHA03247 2925 PPPqpqPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAP---ASSTPPLTGHSL 3001
|
250 260 270
....*....|....*....|....*....|
gi 322518377 263 PSAEGLSTSM-------PPPSGEVQSTWVP 285
Cdd:PHA03247 3002 SRVSSWASSLalheetdPPPVSLKQTLWPP 3031
|
|
| PHA03249 |
PHA03249 |
DNA packaging tegument protein UL25; Provisional |
36-176 |
2.20e-03 |
|
DNA packaging tegument protein UL25; Provisional
Pssm-ID: 223023 Cd Length: 653 Bit Score: 41.92 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 36 PRDRSDPQILQGLGATEGPGTSVLPTPRGGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGTRRPPAVSAGLN 115
Cdd:PHA03249 33 PRPRAPTEDLDRMEAGLSSYSSSSDNKSSFEVVSETDSGSEAEAERGRRAGMGGRNKATKPSRRNKTTQCRPTSLALATA 112
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 322518377 116 AAASITASEG-----ASTPVLPTAPKGSKASEHLTISEGASIS--EQPQSHEGPNVQPTLGEGSGTSV 176
Cdd:PHA03249 113 ATMPATPSSGkspkvSSPPSIPSLSEEDEGAERNSGGDDSSHTdnESTQSQPEADDEPDLAEGHEFSF 180
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
22-285 |
2.82e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 41.58 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 22 SGKGRPAAVPGPAVPRDRSDPQILQGLGATEGPGTSVLPTPRGGSSTSVPPTASEGSSAPGQlitsegrntSQLPTSrkG 101
Cdd:PHA03377 543 SGRRQKRATPPKVSPSDRGPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCK---------DGPPAS--G 611
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 102 RGTRRPPAVSAGLNAAASITASEGASTPVLPTAPKGSKASEHLTISEGASISEQPQSHEGPNVQPTlgEGSGTSVPPTFS 181
Cdd:PHA03377 612 PHEKQPPSSAPRDMAPSVVRMFLRERLLEQSTGPKPKSFWEMRAGRDGSGIQQEPSSRRQPATQST--PPRPSWLPSVFV 689
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 182 EES-GISEPLPSGEGLSISVSPTisegaginEPSPASKAPSTSVPPTAsngLGINLPPTSSEGLSISVLFSASEESDISV 260
Cdd:PHA03377 690 LPSvDAGRAQPSEESHLSSMSPT--------QPISHEEQPRYEDPDDP---LDLSLHPDQAPPPSHQAPYSGHEEPQAQQ 758
|
250 260 270
....*....|....*....|....*....|....
gi 322518377 261 ---------PPPSAEGLSTSMPPPSGeVQSTWVP 285
Cdd:PHA03377 759 apypgywepRPPQAPYLGYQEPQAQG-VQVSSYP 791
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
27-288 |
3.21e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.37 E-value: 3.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 27 PAAVPGPAVPRDRSDPQILQGLGATEGPGTSVLPTPRGGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGTRR 106
Cdd:PRK07003 426 PPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPA 505
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 107 PPAVSAGLNAAASITASEGASTPVLPTAPKGSKASEHLTISEGASISEQPQSHEGPNVQPTLGEGSGTSVPPTFSEEsgi 186
Cdd:PRK07003 506 AVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPA--- 582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 187 SEPLPSGEGLSISV-SPTISEGAGINEPSPASKAP-----STSVPPTAsnglgiNLPPTSSEGLSISVLFSASEES---- 256
Cdd:PRK07003 583 AAPKPAAPRVAVQVpTPRARAATGDAPPNGAARAEqaaesRGAPPPWE------DIPPDDYVPLSADEGFGGPDDGfvpv 656
|
250 260 270
....*....|....*....|....*....|....*...
gi 322518377 257 ------DISVPPPSAEglstsmpPPSGEVQSTWVPPII 288
Cdd:PRK07003 657 fdsgpdDVRVAPKPAD-------APAPPVDTRPLPPAI 687
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
25-237 |
4.08e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.89 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 25 GRPAAVPGPAVPRDRSDPQILQGLGATEGPGTSVLPTPRGGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGT 104
Cdd:COG3469 4 VSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATAT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 105 R-RPPAVSAGLNAAASITASEGASTPVLPTAPKGSKASehltiSEGASISEQPQSHEGPNVQPTLGEGS--GTSVPPTFS 181
Cdd:COG3469 84 AaAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGS-----VTSTTSSTAGSTTTSGASATSSAGSTttTTTVSGTET 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 322518377 182 EESGISEPLPSGEGLSISVSPTISEGAGINEPSPASkAPSTSVPPTASNGLGINLP 237
Cdd:COG3469 159 ATGGTTTTSTTTTTTSASTTPSATTTATATTASGAT-TPSATTTATTTGPPTPGLP 213
|
|
| ser_rich_anae_1 |
NF033849 |
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ... |
46-208 |
4.56e-03 |
|
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.
Pssm-ID: 468206 [Multi-domain] Cd Length: 1122 Bit Score: 40.76 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 46 QGLGATEGPGTSvlpTPRGGSSTSVPPTASEGSSAPGQLITSEGRNTSQLPTSRKGRGTRRPPAVSAGLnaaaSITASEG 125
Cdd:NF033849 409 ASQGGSEGWGSG---DSVQSVSQSYGSSSSTGTSSGHSDSSSHSTSSGQADSVSQGTSWSEGTGTSQGQ----SVGTSES 481
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 126 ASTPVLPTAPKGSKASEHLTISEGASISEqpqshegpnvqpTLGEGSGTSVpptfSEESGISeplpSGEGLSISVSPTIS 205
Cdd:NF033849 482 WSTSQSETDSVGDSTGTSESVSQGDGRST------------GRSESQGTSL----GTSGGRT----SGAGGSMGLGPSIS 541
|
...
gi 322518377 206 EGA 208
Cdd:NF033849 542 LGK 544
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
34-209 |
6.74e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 39.96 E-value: 6.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 34 AVPRDRSDPQILQGLG-ATEGPG----TSVLPTPRGGSSTSVPPtASEGSSAPGQLITSEGRNTSQLPTSRKGRGTRRPP 108
Cdd:PRK13108 274 LAPKGREAPGALRGSEyVVDEALerepAELAAAAVASAASAVGP-VGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQV 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 322518377 109 AVSAGLNAAASITASEGASTPVLPTAPKGSKASEHLTISEGAsiSEQPQSHEgpNVQPTLGEGSGTSVPPTFSEESGISE 188
Cdd:PRK13108 353 ADRDGESTPAVEETSEADIEREQPGDLAGQAPAAHQVDAEAA--SAAPEEPA--ALASEAHDETEPEVPEKAAPIPDPAK 428
|
170 180
....*....|....*....|..
gi 322518377 189 P-LPSGEGlsISVSPTISEGAG 209
Cdd:PRK13108 429 PdELAVAG--PGDDPAEPDGIR 448
|
|
| |
