NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|310190|gb|AAA41776|]
View 

ATP synthase gamma-subunit, partial [Rattus norvegicus]

Protein Classification

F0F1 ATP synthase subunit gamma( domain architecture ID 10795720)

F0F1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
1-269 5.96e-117

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


:

Pssm-ID: 273469  Cd Length: 286  Bit Score: 336.57  E-value: 5.96e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190       1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIK-----GPEDK----KKHLIIGVSSD 71
Cdd:TIGR01146   4 KEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKllnvdHPLLKsrevKKVGILVITSD 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      72 RGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRThSDQFLVSFKDVGRkPPTFGDASVIALELLNSG-- 149
Cdd:TIGR01146  84 RGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRR-GDNIVLSITGLSD-QPTFEEASGIADKLLDAFda 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     150 YEFDEGSIIFNQFKSVISYKTEEKPIFSFST-----VVAAENMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSA 224
Cdd:TIGR01146 162 GEFDELYIVYNKFVSSISQEPTVKQLLPLSAqgpdeGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQAA 241
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 310190     225 RMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:TIGR01146 242 RMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
 
Name Accession Description Interval E-value
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
1-269 5.96e-117

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 336.57  E-value: 5.96e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190       1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIK-----GPEDK----KKHLIIGVSSD 71
Cdd:TIGR01146   4 KEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKllnvdHPLLKsrevKKVGILVITSD 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      72 RGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRThSDQFLVSFKDVGRkPPTFGDASVIALELLNSG-- 149
Cdd:TIGR01146  84 RGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRR-GDNIVLSITGLSD-QPTFEEASGIADKLLDAFda 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     150 YEFDEGSIIFNQFKSVISYKTEEKPIFSFST-----VVAAENMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSA 224
Cdd:TIGR01146 162 GEFDELYIVYNKFVSSISQEPTVKQLLPLSAqgpdeGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQAA 241
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 310190     225 RMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:TIGR01146 242 RMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
1-266 1.20e-101

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 297.57  E-value: 1.20e-101
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIKGP---------EDKKKHLIIGVSSD 71
Cdd:cd12151   4 KEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDdedppllekREVKKVLLIVITSD 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    72 RGLCGAIHSSVAKQMKNDMAAltAAGKEVMIVGIGEKIKSILYRTHsDQFLVSFKDVGRKPPTFGDASVIALELLNSG-Y 150
Cdd:cd12151  84 RGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRG-YNIALPFSDIGDDPTYFEAASIIEELILDFLnG 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190   151 EFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAEN------MSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSA 224
Cdd:cd12151 161 EIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEEsegsrsDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQAA 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 310190   225 RMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGA 266
Cdd:cd12151 241 RMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
ATP-synt pfam00231
ATP synthase;
1-268 2.65e-97

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 286.73  E-value: 2.65e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190       1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTG---------SLALYEKAEIKGPEDKKKHLIIGVSSD 71
Cdd:pfam00231   3 KEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKlqevladlaAASPEDSHPLLERREVKKVGLIVITSD 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      72 RGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSIlYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGY- 150
Cdd:pfam00231  83 RGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDY-FKKRGYEVILEFTGSLGDKPTFEEAAEIADELLDAFLa 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     151 -EFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMS-----IYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSA 224
Cdd:pfam00231 162 gEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEEsladyEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAA 241
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 310190     225 RMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAA 268
Cdd:pfam00231 242 RMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
1-269 1.27e-77

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 236.55  E-value: 1.27e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGT------GSLALyeKAEIKGP----EDKKKHLIIGVSS 70
Cdd:PRK05621   5 KEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEkirkviSHLAS--ASEYDHPllveREVKRVGYIVVTS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     71 DRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRtHSDQFLVSFKDVGRKPpTFGDASVIA---LELLN 147
Cdd:PRK05621  83 DRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKR-RGINVVAEYTGLGDQP-TFEEAIGIAkklLDAYD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    148 SGyEFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMS---IY----DDIDADVLQNYqeynLANIIYYSLKESTTS 220
Cdd:PRK05621 161 NG-EFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSwdyEYepdaEEILDALLPRY----VESQIYQALLENKAS 235
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 310190    221 EQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:PRK05621 236 EQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
1-269 1.65e-76

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 233.89  E-value: 1.65e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVY------GTGSLALYEkAEIKGP----EDKKKHLIIGVSS 70
Cdd:COG0224   5 KEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYaeklreVLAALAAAS-PEYDHPlleeREVKRVGLIVITS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    71 DRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHSDqFLVSFKDVGRKPpTFGDASVIALELL---N 147
Cdd:COG0224  84 DRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGIN-VVAEFTGLSDKP-SFEDAKEIAEELLdafL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190   148 SGyEFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMS------IY----DDIDADVLQNYqeynLANIIYYSLKES 217
Cdd:COG0224 162 AG-EIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWetradyIFepspEEILDALLPRY----LESQIYQALLES 236
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 310190   218 TTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:COG0224 237 AASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
 
Name Accession Description Interval E-value
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
1-269 5.96e-117

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 336.57  E-value: 5.96e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190       1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIK-----GPEDK----KKHLIIGVSSD 71
Cdd:TIGR01146   4 KEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKllnvdHPLLKsrevKKVGILVITSD 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      72 RGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRThSDQFLVSFKDVGRkPPTFGDASVIALELLNSG-- 149
Cdd:TIGR01146  84 RGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRR-GDNIVLSITGLSD-QPTFEEASGIADKLLDAFda 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     150 YEFDEGSIIFNQFKSVISYKTEEKPIFSFST-----VVAAENMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSA 224
Cdd:TIGR01146 162 GEFDELYIVYNKFVSSISQEPTVKQLLPLSAqgpdeGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQAA 241
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 310190     225 RMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:TIGR01146 242 RMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
1-266 1.20e-101

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 297.57  E-value: 1.20e-101
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIKGP---------EDKKKHLIIGVSSD 71
Cdd:cd12151   4 KEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDdedppllekREVKKVLLIVITSD 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    72 RGLCGAIHSSVAKQMKNDMAAltAAGKEVMIVGIGEKIKSILYRTHsDQFLVSFKDVGRKPPTFGDASVIALELLNSG-Y 150
Cdd:cd12151  84 RGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRG-YNIALPFSDIGDDPTYFEAASIIEELILDFLnG 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190   151 EFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAEN------MSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSA 224
Cdd:cd12151 161 EIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEEsegsrsDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQAA 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 310190   225 RMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGA 266
Cdd:cd12151 241 RMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
ATP-synt pfam00231
ATP synthase;
1-268 2.65e-97

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 286.73  E-value: 2.65e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190       1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTG---------SLALYEKAEIKGPEDKKKHLIIGVSSD 71
Cdd:pfam00231   3 KEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKlqevladlaAASPEDSHPLLERREVKKVGLIVITSD 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      72 RGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSIlYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGY- 150
Cdd:pfam00231  83 RGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDY-FKKRGYEVILEFTGSLGDKPTFEEAAEIADELLDAFLa 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     151 -EFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMS-----IYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSA 224
Cdd:pfam00231 162 gEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEEsladyEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAA 241
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 310190     225 RMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAA 268
Cdd:pfam00231 242 RMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
1-269 1.27e-77

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 236.55  E-value: 1.27e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGT------GSLALyeKAEIKGP----EDKKKHLIIGVSS 70
Cdd:PRK05621   5 KEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEkirkviSHLAS--ASEYDHPllveREVKRVGYIVVTS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     71 DRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRtHSDQFLVSFKDVGRKPpTFGDASVIA---LELLN 147
Cdd:PRK05621  83 DRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKR-RGINVVAEYTGLGDQP-TFEEAIGIAkklLDAYD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    148 SGyEFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMS---IY----DDIDADVLQNYqeynLANIIYYSLKESTTS 220
Cdd:PRK05621 161 NG-EFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSwdyEYepdaEEILDALLPRY----VESQIYQALLENKAS 235
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 310190    221 EQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:PRK05621 236 EQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
1-269 1.65e-76

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 233.89  E-value: 1.65e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVY------GTGSLALYEkAEIKGP----EDKKKHLIIGVSS 70
Cdd:COG0224   5 KEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYaeklreVLAALAAAS-PEYDHPlleeREVKRVGLIVITS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    71 DRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHSDqFLVSFKDVGRKPpTFGDASVIALELL---N 147
Cdd:COG0224  84 DRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGIN-VVAEFTGLSDKP-SFEDAKEIAEELLdafL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190   148 SGyEFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMS------IY----DDIDADVLQNYqeynLANIIYYSLKES 217
Cdd:COG0224 162 AG-EIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWetradyIFepspEEILDALLPRY----LESQIYQALLES 236
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 310190   218 TTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:COG0224 237 AASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
1-269 9.30e-62

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 196.43  E-value: 9.30e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGT------GSLALYEKAE---IKGPEDKKKHLIIGVSSD 71
Cdd:PRK13423   5 KDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAklgevlGSLAARAGEDahpLLVPREVKKALLVVVTSD 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     72 RGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILyRTHSDQFLVSFKDVGRKPpTFGDASVIALELLNsGY- 150
Cdd:PRK13423  85 RGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFL-KNRGLIIRKNYGGVVANL-TYETAALLAQELIE-GYl 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    151 --EFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMS----IYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSA 224
Cdd:PRK13423 162 agEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEAADDEYlpeyIYEPSRDALLAELLPKHVEVQIYRALLESVASEHGA 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 310190    225 RMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:PRK13423 242 RMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEAL 286
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
1-269 4.13e-44

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 150.72  E-value: 4.13e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYG------TGSLALYEKAEIKG-------PEDKKKHLIIg 67
Cdd:PRK14111   5 REIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYAdrirdvMGDLTARTVGAARVgpllekrPTVKRVALIL- 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     68 VSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHSDqFLVSFKDVGRKPPTfgDASVIALELLN 147
Cdd:PRK14111  84 VTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQA-LVAEFTRLGDAPKL--EAILPVATSAI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    148 SGY---EFDEGSIIFNQFksvISYKTEEKPIFSFSTVVAAENMS------IYDDIDADVLQNYQEYNLANIIYYSLKEST 218
Cdd:PRK14111 161 NGFqsgKYDEVYVLYSEF---INTLVQRPTIKQLLPIEPPEISTttvvdyTYEPSPEEVLRALLPRFVEVQLYQAVLESI 237
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 310190    219 TSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:PRK14111 238 ASEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAAL 288
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
1-270 3.78e-41

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 143.37  E-value: 3.78e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYG------TGSLALYEKAEI----KGPEDKKKHLIIgVSS 70
Cdd:PRK14110   7 RDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSeklyelISDLAAHIDREShpllERREEKNVDLVI-ITA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     71 DRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSiLYRTHSDQFLVSFKDVGRKPPTFGDASVIAlELLNSGY 150
Cdd:PRK14110  86 DRGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQ-YFSKRGYNIIKSYEDVFRKEINFSVVKEVG-GILASRY 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    151 ---EFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAA---ENMSIY------DDIDADVLQNYQEYNLaniiYYSLKEST 218
Cdd:PRK14110 164 ieeETDAVYLINNEMITRATYKPKVRKFLPFEVEAQEkklDELSVYnievseEEFLDKLLQLYLNYQL----YRALVESN 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 310190    219 TSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAALD 270
Cdd:PRK14110 240 AAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAMK 291
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
1-269 1.92e-37

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 133.40  E-value: 1.92e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGT------GSLA----LYEKAEIKGPEDKKKHLIIGVSS 70
Cdd:PRK13425   5 KDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAklkemlGSLSakvdTSLNPLLSPRSEVNKVLVILITS 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     71 DRGLCGAIHSSVAKQ----MKNDMAALTAAGKEVMIVGiGEKiKSILYRTHSDQFLVSFKDVGRKPpTFGDASVIAlELL 146
Cdd:PRK13425  85 DRGLCGAFNTNIIKLaqkvIHEDYAALHAKGGVSMICA-GTR-GFDFFRKRGYNIVKGYPGVFQNL-DFSVAKEIA-ETA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    147 NSGY---EFDEGSIIFNQFKSVIS--YKTEE-KPIFSFSTVVAAENMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTS 220
Cdd:PRK13425 161 SGMYlrgEVDKVVVVYNEFKSVLApnLKSEVlLPITPEKPGAEGGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLESNAA 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 310190    221 EQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:PRK13425 241 EQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADAL 289
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
1-269 1.92e-36

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 131.02  E-value: 1.92e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGT------GSLAlyEKAE------IKGPEDKKKHLIIGV 68
Cdd:PRK13424   5 KDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEkfydmlGDLA--SRADssahplLEVREEIKTCGIVLI 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     69 SSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHSDQFLVSFKDVGRKppTFGDASVIALELLNs 148
Cdd:PRK13424  83 TSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEIVTAYADQMTSF--DFQLANSIGLEVID- 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    149 GY---EFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMS------IYDDIDADVLQNYQEYNLANIIYYSLKESTT 219
Cdd:PRK13424 160 GYltgELDEVVLVYGEFVSMARQLPITLQILPIAPEEAEEEEAgasseyIYEPSVEGLLAELLPRFIKVQIYRGLLDTSA 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 310190    220 SEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:PRK13424 240 SEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEAL 289
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
1-270 8.31e-34

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 123.90  E-value: 8.31e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYG------TGSLALYEKAE----IKGPEDKKKHLIIGVSS 70
Cdd:PRK13427   5 REIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYAnkikelVSSLASLEGVVhspyLRRPEKIRTVALLIITA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     71 DRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSiLYRTHSDQFLVSFKDVGRKPpTFGDASVIA---LELLN 147
Cdd:PRK13427  85 NRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGIS-FFKFAGEKAEKTYTHIDDKS-GYKEAEELAnlfMERFA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    148 SGyEFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMSIYDDI----DAD-VLQNYQEYNLANIIYYSLKESTTSEQ 222
Cdd:PRK13427 163 NE-SVDAVEIASTVYYSAASQKPETTRVLPLEPPTAAAEGSVQDDVvyepSPEaILESLLPLVVKTAFLKAILEANASEQ 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 310190    223 SARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAALD 270
Cdd:PRK13427 242 IARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADALN 289
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
1-269 3.64e-30

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 114.49  E-value: 3.64e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLA-----LYEKAEIKGPEDKKKHL----IIGVSSD 71
Cdd:PRK13426   5 KEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHiltnfLSADLDVESPFTVERPVkrvaIVVFSSN 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     72 RGLCGAIHSSVAKQMKNDMAALTAAG-KEVMIVGIGEKIKSILYRthsdqflVSFKDVGRKP-----PTFGDASVIALEL 145
Cdd:PRK13426  85 TSLCGGFNANIIKLLLQTIGEYRTLGqDNILIYPVGKKIEEAVKK-------LGFKVQGDYQtladkPSYEEAAALAMRL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    146 LNS--GYEFDEGSIIFNQFKSVISYKTEEKPIF--SFSTVVAAEN--MSIYDDI---DAD-VLQNYQEYNLANIIYYSLK 215
Cdd:PRK13426 158 MELflEGEIDKVELIYHHFKSMGVQVLTRETYLpiDLSQEKNAEHagGVANDYIiepSADtVLNDLIPKLLSLKIYTALL 237
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 310190    216 ESTTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:PRK13426 238 DSNASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
1-269 1.24e-22

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 94.35  E-value: 1.24e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190      1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEK---AEIKGP------EDKKKHLIIGVSSD 71
Cdd:PRK13422   5 REIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNvtaASIDYPnpylfdRDVKRVGYIVTSTD 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190     72 RGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHSDQFLVSF----KDVGRKPPTFGDASVIALELLN 147
Cdd:PRK13422  85 RGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFAKLKDVNIVATAhyndKDKEGSIRAIGGAVKVMLDKFT 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310190    148 SGyEFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVAAENMS-------------IYDDIDADVLQNYQEYNLANIIYYSL 214
Cdd:PRK13422 165 AG-EIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAEEIKankekatkghwdyIYERDIEEVLNALCIRYIEAQVRGAI 243
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 310190    215 KESTTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269
Cdd:PRK13422 244 LENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH