NCBI Conserved Domain Search

Conserved domains on [gi|1572721|gb|AAB09089|]

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megakaryocyte stimulating factor [Homo sapiens]

Protein Classification

SO and HX domain-containing protein( domain architecture ID 10640906)

SO and HX domain-containing protein

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1143-1403

1.17e-44

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.17e-44

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721  1143 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1221
Cdd:cd00094    1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721  1222 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygemtqvr 1300
Cdd:cd00094   79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721  1301 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1380
Cdd:cd00094  137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                        250       260
                 ....*....|....*....|...
gi 1572721  1381 PSRTARAITTRSGqtlSKVWYNC 1403
Cdd:cd00094  175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247 super family

cl33720

large tegument protein UL36; Provisional

397-907

4.94e-26

large tegument protein UL36; Provisional

The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 117.35 E-value: 4.94e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKpapTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 476
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPD---EPVGEPVHPRMLTWIRGLEELASDDAGDPPP 2553

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    477 TTPKEPAPTAPKKPAPttPKEPAPtTPKEPAPTTTKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 551
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVP--PPRPAP-RPSEPAVTSRARrpdapPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    552 PSPTTTKEPAPTTPKEPAPTTPKK-PAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPE 630
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    631 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPaPTTPKEPAPTTPKEPAPTTPKETAPTTPK 710
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    711 GTAPTTLKEPAPTTPKK-PAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT-----------------PKE 772
Cdd:PHA03247 2790 SLSESRESLPSPWDPADpPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrpPSR 2869

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    773 PAPTTPKGTA-PTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 851
Cdd:PHA03247 2870 SPAAKPAAPArPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    852 PTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 907
Cdd:PHA03247 2950 AGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.15e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.15e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1572721       66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.88e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.88e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1572721       26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

kgd super family

cl39092

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

359-432

5.91e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

The actual alignment was detected with superfamily member PRK12270:

Pssm-ID: 476867 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 5.91e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721    359 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP 432
Cdd:PRK12270   46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1143-1403

1.17e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.17e-44

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721  1143 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1221
Cdd:cd00094    1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721  1222 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygemtqvr 1300
Cdd:cd00094   79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721  1301 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1380
Cdd:cd00094  137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                        250       260
                 ....*....|....*....|...
gi 1572721  1381 PSRTARAITTRSGqtlSKVWYNC 1403
Cdd:cd00094  175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

397-907

4.94e-26

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 117.35 E-value: 4.94e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKpapTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 476
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPD---EPVGEPVHPRMLTWIRGLEELASDDAGDPPP 2553

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    477 TTPKEPAPTAPKKPAPttPKEPAPtTPKEPAPTTTKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 551
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVP--PPRPAP-RPSEPAVTSRARrpdapPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    552 PSPTTTKEPAPTTPKEPAPTTPKK-PAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPE 630
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    631 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPaPTTPKEPAPTTPKEPAPTTPKETAPTTPK 710
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    711 GTAPTTLKEPAPTTPKK-PAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT-----------------PKE 772
Cdd:PHA03247 2790 SLSESRESLPSPWDPADpPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrpPSR 2869

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    773 PAPTTPKGTA-PTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 851
Cdd:PHA03247 2870 SPAAKPAAPArPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    852 PTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 907
Cdd:PHA03247 2950 AGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.15e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.15e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1572721       66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.88e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.88e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1572721       26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.88e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.88e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 1572721      69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.93e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.93e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1572721      29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1195-1239

9.63e-11

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.63e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 1572721     1195 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1239
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1195-1237

1.07e-08

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 1.07e-08

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1572721    1195 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1237
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

374-752

1.31e-08

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 59.78 E-value: 1.31e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     374 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT--TPKEPAPTTPKKPA--PTTPK 449
Cdd:pfam03154  180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPLQPMtqPPPPS 259

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     450 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKS 529
Cdd:pfam03154  260 QVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP 339

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     530 APTTTKEPAPTTTKSAPTTPKEPSPTTtkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPaPTAPKEPA 609
Cdd:pfam03154  340 PREQPLPPAPLSMPHIKPPPTTPIPQL---PNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHP-PSAHPPPL 415

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     610 PTTPKetapttpkkltpttPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPA 689
Cdd:pfam03154  416 QLMPQ--------------SQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGP 481

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721     690 PTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 752
Cdd:pfam03154  482 PTSTSSAMPGIqPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPT 545

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

379-613

1.60e-07

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 56.21 E-value: 1.60e-07

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   379 KEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepapttPKE 458
Cdd:COG5665  276 TNQLTTSNTPTSTAKAQPQPPTKKQPAKEPPSDTASG---NPSAPSVLINSDSPTSEDPATASVPTT----------EET 342

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   459 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 538
Cdd:COG5665  343 TAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVDKKVSPDSATSSTKSEKEGGTASSPMPPNIAIGAKDDVDATDPS 422

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721   539 PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTP 613
Cdd:COG5665  423 QEAKEYTKNAPMTPEADSAPESSVRTEASPSAGSDLEPENTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANETGP 497

Streccoc_I_II

NF033804

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ...

749-906

5.91e-07

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.

Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 54.56 E-value: 5.91e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    749 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAP--TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 826
Cdd:NF033804  825 PKITKEKPTPPVAPTAPQAPTYEVEKPLEPAPVAPTYENEPTPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPTYENEP 904

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    827 AP--TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPttiHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTP 904
Cdd:NF033804  905 TPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPP---VKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTP 981


                  ..
gi 1572721    905 AA 906
Cdd:NF033804  982 PA 983

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

384-450

9.90e-06

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 49.51 E-value: 9.90e-06

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721     384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT-PKKPAPTTPKE 450
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVPSS 142

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

671-800

2.49e-05

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 48.22 E-value: 2.49e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:NF040712  200 ATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGE 279

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1572721    751 PTTPKGTAPTTPKEPAPTTPKEPA-PTTPKGTAPTTLKEPAPTTPKKPAPK 800
Cdd:NF040712  280 PPAPGAAETPEAAEPPAPAPAAPAaPAAPEAEEPARPEPPPAPKPKRRRRR 330

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

473-605

2.83e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.76 E-value: 2.83e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    473 EPAPTTPKEPAPTAPKKPAPTTPKEPAPT-TPKEPAPTTTKEPSPTTPKEPAptttksaPTTTKEPAPTTTKSAPTTPKE 551
Cdd:NF040712  208 EPADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEP-------VGPGAAPAAEPDEATRDAGEP 280

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1572721    552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAP 605
Cdd:NF040712  281 PAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

481-637

3.06e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.76 E-value: 3.06e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    481 EPAPTAPKKPAPTTPKE---PAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPtttksAPTTPKEPSPTTT 557
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRA-----GVEQPEDEPVGPG 263

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    558 KEPAPttpkEPAPTTPKKPAPTTPKEPAPTTPKEPAPtttkkPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 637
Cdd:NF040712  264 AAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPA-----PAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

359-432

5.91e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 5.91e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721    359 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP 432
Cdd:PRK12270   46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

540-878

6.53e-04

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.99 E-value: 6.53e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    540 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAptTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPT 619
Cdd:NF033839  155 SSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKE--KAKLAVATYMSKILDDIQKHHLQKEKHRQIVA 232

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    620 TPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 699
Cdd:NF033839  233 LIKELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKP 312

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    700 TPKETAP-TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPApTTPKGTAPTTPKEPAPTTPKEPAPTTP 778
Cdd:NF033839  313 EPETPKPeVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPE-VKPQPEKPKPEVKPQPETPKPEVKPQP 391

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    779 KGTAPTTLKEPAPTTPK-KPAPKELAPTTTKGPTSTTSD-KPAPTTPK---ETAPTTPKEPAPTTPKKPAPTTPETPPPT 853
Cdd:NF033839  392 EKPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKpevKPQPEKPKPEVKPQPETPKPEVKPQPEKP 471

                         330       340
                  ....*....|....*....|....*
gi 1572721    854 TSEVSTPTTTKEPTTIHKSPDESTP 878
Cdd:NF033839  472 KPEVKPQPEKPKPDNSKPQADDKKP 496

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

377-519

7.52e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 7.52e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    377 TPKEPAPTTTKSAPTTPkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT--PKEPAPTTPKKPAPTTPKEPAPT 454
Cdd:NF040712  191 DFGRPLRPLATVPRLAR-EPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    455 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 519
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

567-731

9.44e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.22 E-value: 9.44e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    567 EPAPTTPKKPAPTTPKE---PAPTTPKEPAPTTTKKPAPTAPKEPAPT-TPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 642
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    643 TTPEElapttpeeptpttpeepaptTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPttpketaPTTPKGTAPTTLKEPAP 722
Cdd:NF040712  269 EPDEA--------------------TRDAGEPPAPGAAETPEAAEPPAPAPAAPAA-------PAAPEAEEPARPEPPPA 321


                  ....*....
gi 1572721    723 TTPKKPAPK 731
Cdd:NF040712  322 PKPKRRRRR 330

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

383-519

1.17e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.83 E-value: 1.17e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    383 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPT 462
Cdd:NF040712  190 PDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721    463 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTtpkEPAPTTPKEPAPTTTKEPSPTTP 519
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPA---APAAPAAPEAEEPARPEPPPAPK 323

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

311-450

1.65e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.53 E-value: 1.65e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   311 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPAlTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP 390
Cdd:COG3266  236 AAEVLTARLVLLLLIIGSALKAPSQASSASAPA-TTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAP 314

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   391 TTPKEPAPTTTKepapttPKEPAPTTTKEPAPTTTKSApttpkePAPTTPKKPAPTTPKE 450
Cdd:COG3266  315 AEAAAPQPTAAK------PVVTETAAPAAPAPEAAAAA------AAPAAPAVAKKLAADE 362

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

423-785

2.18e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 2.18e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    423 TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT 502
Cdd:NF033839  155 SSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALI 234

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    503 PKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPapTTPK---EPAPTTPKKPAPT 579
Cdd:NF033839  235 KELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKP--SAPKpgmQPSPQPEKKEVKP 312

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    580 TPKEPAP-TTPKEPAPTTTKKPAPTAPK---EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE-KPAPTTPE-ELAPTTP 653
Cdd:NF033839  313 EPETPKPeVKPQLEKPKPEVKPQPEKPKpevKPQLETPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPETPKpEVKPQPE 392

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    654 EEPTPTTPEEPAPTTPKAAAPNTPK---EPAPTTPKE---PAPTTPK---EPAPTTPKETAPTTPKGTAPTTlkEPAPTT 724
Cdd:NF033839  393 KPKPEVKPQPEKPKPEVKPQPEKPKpevKPQPEKPKPevkPQPEKPKpevKPQPEKPKPEVKPQPETPKPEV--KPQPEK 470

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572721    725 PKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTpkEPAPTTPKGTAPTT 785
Cdd:NF033839  471 PKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTN--EKATNKPKKSLPST 529

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

326-572

2.22e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 2.22e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    326 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP-APTTTKEP 404
Cdd:NF033839  277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLeTPKPEVKP 356

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    405 APTTPKEPAPTTTKEPAPTTtKSAPTTPK---EPAPTTPK---KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Cdd:NF033839  357 QPEKPKPEVKPQPEKPKPEV-KPQPETPKpevKPQPEKPKpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 435

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    479 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Cdd:NF033839  436 EKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTN 515

                         250
                  ....*....|....
gi 1572721    559 EPAPTTPKEPAPTT 572
Cdd:NF033839  516 EKATNKPKKSLPST 529

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

384-734

5.48e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.91 E-value: 5.48e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTtKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 463
Cdd:NF033839  155 SSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDI-NQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVAL 233

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    464 PKEPAPTTKEPAP-----TTPKEPAPTAPKKPA--------------PTTPKEP------APTTPKEPAPTTTKEPSPTT 518
Cdd:NF033839  234 IKELDELKKQALSeidnvNTKVEIENTVHKIFAdmdavvtkfkkgltQDTPKEPgnkkpsAPKPGMQPSPQPEKKEVKPE 313

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    519 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP-SPTTTKEPAPTTPK---EPAPTTPKKPAPTTPKEPAPTTPKEP-A 593
Cdd:NF033839  314 PETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLeTPKPEVKPQPEKPKpevKPQPEKPKPEVKPQPETPKPEVKPQPeK 393

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    594 PTTTKKPAPTAPK---EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE-KPAPTTPEelAPTTPEEPTPTTPEEPAPTTP 669
Cdd:NF033839  394 PKPEVKPQPEKPKpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPK--PEVKPQPETPKPEVKPQPEKP 471

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    670 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELA 734
Cdd:NF033839  472 KPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKPKKSLPSTGSISNLA 536

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

373-440

8.88e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 8.88e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    373 SAPTTPKEPAPTTTkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP 440
Cdd:NF041121   19 AAPPSPEGPAPTAA-SQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAP 85

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1143-1403

1.17e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.17e-44

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721  1143 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1221
Cdd:cd00094    1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721  1222 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygemtqvr 1300
Cdd:cd00094   79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721  1301 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1380
Cdd:cd00094  137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                        250       260
                 ....*....|....*....|...
gi 1572721  1381 PSRTARAITTRSGqtlSKVWYNC 1403
Cdd:cd00094  175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

397-907

4.94e-26

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 117.35 E-value: 4.94e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKpapTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 476
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPD---EPVGEPVHPRMLTWIRGLEELASDDAGDPPP 2553

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    477 TTPKEPAPTAPKKPAPttPKEPAPtTPKEPAPTTTKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 551
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVP--PPRPAP-RPSEPAVTSRARrpdapPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    552 PSPTTTKEPAPTTPKEPAPTTPKK-PAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPE 630
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    631 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPaPTTPKEPAPTTPKEPAPTTPKETAPTTPK 710
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    711 GTAPTTLKEPAPTTPKK-PAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT-----------------PKE 772
Cdd:PHA03247 2790 SLSESRESLPSPWDPADpPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrpPSR 2869

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    773 PAPTTPKGTA-PTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 851
Cdd:PHA03247 2870 SPAAKPAAPArPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    852 PTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 907
Cdd:PHA03247 2950 AGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005

PHA03247

large tegument protein UL36; Provisional

359-858

7.04e-25

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 113.49 E-value: 7.04e-25

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    359 ASTTPKEPTPTTIKSAPttPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPkePAPtttkePAPTTTKSAPttPKEPAPt 438
Cdd:PHA03247 2508 APPAPSRLAPAILPDEP--VGEPVHPRMLTWIRGLEELASDDAGDPPPPLP--PAA-----PPAAPDRSVP--PPRPAP- 2575

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    439 TPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTtpKEPAPTTPKEPAPTTTKEPsPTT 518
Cdd:PHA03247 2576 RPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS--PSPAANEPDPHPPPTVPPP-ERP 2652

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    519 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTK 598
Cdd:PHA03247 2653 RDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAS 2732

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    599 KPAPTAPKEPA-PTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPkAAAPNTP 677
Cdd:PHA03247 2733 PALPAAPAPPAvPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDP-ADPPAAV 2811

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    678 KEPAPTTPKEPAPTTPkEPAPTTPKETAPTTPKGTAPTTLKEPAPTTP-----KKPAPKELAPTTTKEPTSTTSDKPAPT 752
Cdd:PHA03247 2812 LAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPggdvrRRPPSRSPAAKPAAPARPPVRRLARPA 2890

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    753 TPKGTA----PTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAP----TTPK 824
Cdd:PHA03247 2891 VSRSTEsfalPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPwlgaLVPG 2970

                         490       500       510
                  ....*....|....*....|....*....|....*
gi 1572721    825 ETAPTTPKEPAPTTPKK-PAPTTPETPPPTTSEVS 858
Cdd:PHA03247 2971 RVAVPRFRVPQPAPSREaPASSTPPLTGHSLSRVS 3005

PHA03247

large tegument protein UL36; Provisional

404-915

1.10e-19

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 96.55 E-value: 1.10e-19

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    404 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKepAPTTPKKPAPT-----TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Cdd:PHA03247 2478 PVYRRPAEARFPFAAGAAPDPGGGGPPDPD--APPAPSRLAPAilpdePVGEPVHPRMLTWIRGLEELASDDAGDPPPPL 2555

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    479 PKEPAPTAPKKPAPttPKEPAPTtPKEPApTTTKEPSPTTPKEPAPtttksaptttkepaptttksaPTTPKEPsptttk 558
Cdd:PHA03247 2556 PPAAPPAAPDRSVP--PPRPAPR-PSEPA-VTSRARRPDAPPQSAR---------------------PRAPVDD------ 2604

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    559 epaPTTPKEPAPTTPKKPAPTTPKEPAPTtpkePAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 638
Cdd:PHA03247 2605 ---RGDPRGPAPPSPLPPDTHAPDPPPPS----PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQAS 2677

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    639 KPaPTTPEElapttpeeptpttpeepapttpkaaaPNTPKEPAPTTPKEPAPTTPKEPAPTtPKETAPTTPKGTAPTTLK 718
Cdd:PHA03247 2678 SP-PQRPRR--------------------------RAARPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPGPAAAR 2729

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    719 EPAPTTPKKPAPKELAPTTTKeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPA 798
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPAT---------PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS 2800

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    799 PKELAPTT----TKGPTSTTSDKPAPTTPKET-----APTTPKEPAPTT------------------PKKPAPTTPETPP 851
Cdd:PHA03247 2801 PWDPADPPaavlAPAAALPPAASPAGPLPPPTsaqptAPPPPPGPPPPSlplggsvapggdvrrrppSRSPAAKPAAPAR 2880

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    852 PTTSEVSTPTTTKEPTTIHKSPDE----STPELSAEPTPKALENSPKEPgVPTTKTPAATKPEMTTTA 915
Cdd:PHA03247 2881 PPVRRLARPAVSRSTESFALPPDQperpPQPQAPPPPQPQPQPPPPPQP-QPPPPPPPRPQPPLAPTT 2947

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.15e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.15e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1572721       66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.88e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.88e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1572721       26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.88e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.88e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 1572721      69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.93e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.93e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1572721      29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

PRK12323

DNA polymerase III subunit gamma/tau;

388-596

3.75e-11

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 67.59 E-value: 3.75e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    388 SAPTTPKE-PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepaptTPKEPTPTTPKE 466
Cdd:PRK12323  372 AGPATAAAaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAP---------EALAAARQASAR 442

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    467 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPK---EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 543
Cdd:PRK12323  443 GPGGAPAPAPAPAAAPAAAARPAAAGPRPVaaaAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWV 522

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    544 SAPTtpkePSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP--APTTPKEPAPTT 596
Cdd:PRK12323  523 AESI----PDPATADPDDAFETLAPAPAAAPAPRAAAATEPvvAPRPPRASASGL 573

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1195-1239

9.63e-11

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.63e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 1572721     1195 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1239
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

PRK07764

DNA polymerase III subunits gamma and tau; Validated

380-607

2.81e-10

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 65.01 E-value: 2.81e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    380 EPAPTTTKSAPTTPKEPAPtttKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 459
Cdd:PRK07764  587 VVGPAPGAAGGEGPPAPAS---SGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    460 TPTTPKEPAPTTKEPAPTTPKePAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 539
Cdd:PRK07764  664 DGGDGWPAKAGGAAPAAPPPA-PAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLP 742

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    540 TTTKSAPTTPKEPSPTTtkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKE 607
Cdd:PRK07764  743 PEPDDPPDPAGAPAQPP---PPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAME 807

PRK12323

DNA polymerase III subunit gamma/tau;

484-709

5.76e-10

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 63.74 E-value: 5.76e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    484 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEpSPTTTKEPAPT 563
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASAR-GPGGAPAPAPA 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    564 TPKEPAPTTPkkPAPTTPKEPAPTTPKEPAPtttkkPAPTAPKEPAPTTPketapttpkkltpTTPEKLAPTTPEkPAPT 643
Cdd:PRK12323  454 PAAAPAAAAR--PAAAGPRPVAAAAAAAPAR-----AAPAAAPAPADDDP-------------PPWEELPPEFAS-PAPA 512

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    644 TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTtpkePAPTTPKETAPTTP 709
Cdd:PRK12323  513 QPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV----VAPRPPRASASGLP 574

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

537-616

6.98e-10

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 64.14 E-value: 6.98e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    537 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKET 616
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

543-617

1.54e-09

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 62.99 E-value: 1.54e-09

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    543 KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETA 617
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA 111

PRK07764

DNA polymerase III subunits gamma and tau; Validated

491-883

3.72e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 61.54 E-value: 3.72e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    491 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 570
Cdd:PRK07764  389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAP 468

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    571 TTPKKPAPTTPKEPAPTTPKEPAPTTtkkPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAP 650
Cdd:PRK07764  469 APAAAPEPTAAPAPAPPAAPAPAAAP---AAPAAPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLPEATVLGVRG 545

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    651 TT----------------------------PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTP----KEPAPTTPKEPAP 698
Cdd:PRK07764  546 DTlvlgfstgglarrfaspgnaevlvtalaEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPpeeaARPAAPAAPAAPA 625

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    699 TTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGT-APTTPKEPAPTTPKEPAPTT 777
Cdd:PRK07764  626 APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPApAPAAPAAPAGAAPAQPAPAP 705

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    778 PKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEV 857
Cdd:PRK07764  706 AATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEM 785

                         410       420
                  ....*....|....*....|....*.
gi 1572721    858 STPTTTKEPTTIHKSPDESTPELSAE 883
Cdd:PRK07764  786 AEDDAPSMDDEDRRDAEEVAMELLEE 811

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

478-764

4.40e-09

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 61.24 E-value: 4.40e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    478 TPKEPAPTAPKKPAPTTpKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT 557
Cdd:PTZ00449  542 EPKEGGKPGETKEGEVG-KKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDI 620

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    558 kepaPTTPKEP-APTTPKKPAPTTpKEPAPTTPKEPAPTTTKKPaPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTT 636
Cdd:PTZ00449  621 ----PKSPKRPeSPKSPKRPPPPQ-RPSSPERPEGPKIIKSPKP-PKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVV 694

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    637 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTP-KEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPT 715
Cdd:PTZ00449  695 LDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEPiGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILA 774

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1572721    716 TLKEPAPTTPKKPAPKELAPTTTKEPTSTTsdkpaptTPKGTAPTTPKE 764
Cdd:PTZ00449  775 EEFKEEDIHAETGEPDEAMKRPDSPSEHED-------KPPGDHPSLPKK 816

PRK07764

DNA polymerase III subunits gamma and tau; Validated

373-705

5.23e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.77 E-value: 5.23e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTtkEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:PRK07764  400 SAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS--PAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPT 477

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    453 PTTPKEPTPTTPKEPAPTtkEPAPTTPKEPAPTAP-----------------------KKPAPT---------------- 493
Cdd:PRK07764  478 AAPAPAPPAAPAPAAAPA--APAAPAAPAGADDAAtlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstg 555

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    494 -----------------------------------TPKEPAPTTPKEPAPTT--TKEPSPTTPKEPAPTTTKSAPTTTKE 536
Cdd:PRK07764  556 glarrfaspgnaevlvtalaeelggdwqveavvgpAPGAAGGEGPPAPASSGppEEAARPAAPAAPAAPAAPAPAGAAAA 635

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    537 PAPTTTKSAPT-TPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPkePAPTTPKEPAPTTTKKPAPTAPKePAPTTPKE 615
Cdd:PRK07764  636 PAEASAAPAPGvAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAP--PPAPAPAAPAAPAGAAPAQPAPA-PAATPPAG 712

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    616 TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 695
Cdd:PRK07764  713 QADDPAAQPPQAAQGASAPSPAADDPVPLPPE-PDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAP 791

                         410
                  ....*....|
gi 1572721    696 PAPTTPKETA 705
Cdd:PRK07764  792 SMDDEDRRDA 801

PRK07764

DNA polymerase III subunits gamma and tau; Validated

397-775

6.25e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.77 E-value: 6.25e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 476
Cdd:PRK07764  389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAP 468

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    477 TTPKEPAPTAPKKPAPTTPKEPAPTtPKEPAPTTTKEPSPTTP------------------KEPAPTTTKSAPTTTKEPA 538
Cdd:PRK07764  469 APAAAPEPTAAPAPAPPAAPAPAAA-PAAPAAPAAPAGADDAAtlrerwpeilaavpkrsrKTWAILLPEATVLGVRGDT 547

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    539 PTTTKSAP----------------------------------TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP 584
Cdd:PRK07764  548 LVLGFSTGglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAP 627

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    585 AP-TTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeelapttpeeptpttpee 663
Cdd:PRK07764  628 APaGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAA------------------ 689

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    664 papttPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTkepts 743
Cdd:PRK07764  690 -----PAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPP----- 759

                         410       420       430
                  ....*....|....*....|....*....|..
gi 1572721    744 ttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAP 775
Cdd:PRK07764  760 -----PPPAPAPAAAPAAAPPPSPPSEEEEMA 786

rne

PRK10811

ribonuclease E; Reviewed

544-774

6.46e-09

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 60.82 E-value: 6.46e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    544 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTpkEPAPTTTKKPAPTAPKEPAPTTPKETApttpkk 623
Cdd:PRK10811  844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETT------ 915

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    624 ltptTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeepapttpKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKE 703
Cdd:PRK10811  916 ----HPEVIAAPVTEQPQVITESD----------------------VAVAQEVAEHAEPVVEPQDETADIEEAAETAEVV 969

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572721    704 TAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPApttpkgTAPTTpKEPAPTTPKEPA 774
Cdd:PRK10811  970 VAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHA------TAPMT-RAPAPEYVPEAP 1033

PRK07003

DNA polymerase III subunit gamma/tau;

395-642

7.42e-09

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 60.25 E-value: 7.42e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    395 EPAPTTTKEPAPTTPKE-----PAPTTTKEPAPTTTKSAPTTPKEPAPT---TPKKPAPTTPKEPAPTTPKEPTPTTPKE 466
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARvagavPAPGARAAAAVGASAVPAVTAVTGAAGaalAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    467 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEpsPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 546
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP--PDAAFEPAPRAAAPSAATPAAVPDARAPAAA 516

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    547 TTPKEPSPttTKEPAP-TTPKEPAPTTPKKPA-----------------PTTPKEPAPTTPKEPA-PTTTKKPAPTAPKE 607
Cdd:PRK07003  517 SREDAPAA--AAPPAPeARPPTPAAAAPAARAggaaaaldvlrnagmrvSSDRGARAAAAAKPAAaPAAAPKPAAPRVAV 594

                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1572721    608 PAPtTPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 642
Cdd:PRK07003  595 QVP-TPRARAATGDAPPNGAARAEQAAESRGAPPP 628

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1195-1237

1.07e-08

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 1.07e-08

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1572721    1195 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1237
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

PRK12323

DNA polymerase III subunit gamma/tau;

474-648

1.26e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 59.50 E-value: 1.26e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPS 553
Cdd:PRK12323  385 PAPAAAAPAAAAPAPAAPPAAP--AAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAA 462

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    554 PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLA 633
Cdd:PRK12323  463 RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLA 542

                         170
                  ....*....|....*
gi 1572721    634 PTTPEKPAPTTPEEL 648
Cdd:PRK12323  543 PAPAAAPAPRAAAAT 557

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

374-752

1.31e-08

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 59.78 E-value: 1.31e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     374 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT--TPKEPAPTTPKKPA--PTTPK 449
Cdd:pfam03154  180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPLQPMtqPPPPS 259

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     450 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKS 529
Cdd:pfam03154  260 QVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP 339

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     530 APTTTKEPAPTTTKSAPTTPKEPSPTTtkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPaPTAPKEPA 609
Cdd:pfam03154  340 PREQPLPPAPLSMPHIKPPPTTPIPQL---PNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHP-PSAHPPPL 415

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     610 PTTPKetapttpkkltpttPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPA 689
Cdd:pfam03154  416 QLMPQ--------------SQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGP 481

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721     690 PTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 752
Cdd:pfam03154  482 PTSTSSAMPGIqPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPT 545

PRK12323

DNA polymerase III subunit gamma/tau;

419-617

1.51e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 59.12 E-value: 1.51e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    419 EPAPTTTKSAPTTPKEPA--PTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTpkEPAPTAPKKPAPTTPK 496
Cdd:PRK12323  371 GAGPATAAAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEA--LAAARQASARGPGGAP 448

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    497 EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPtTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 576
Cdd:PRK12323  449 APAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAP-ADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIP 527

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1572721    577 APTTPKEPAPTTPKEPAPTTTKKPAPTAPKEP--APTTPKETA 617
Cdd:PRK12323  528 DPATADPDDAFETLAPAPAAAPAPRAAAATEPvvAPRPPRASA 570

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

552-630

2.25e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 59.13 E-value: 2.25e-08

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721    552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPE 630
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116

PHA03307

transcriptional regulator ICP4; Provisional

321-730

3.31e-08

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 58.64 E-value: 3.31e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    321 LAPTSKVLAKPTPKAettTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPtt 400
Cdd:PHA03307   43 LVSDSAELAAVTVVA---GAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP-- 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    401 tkePAPTTPKEPAPTttkePAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPK 480
Cdd:PHA03307  118 ---PPTPPPASPPPS----PAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPP 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    481 EPAPTAPKKPAPTtpkePAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTkeP 560
Cdd:PHA03307  191 AEPPPSTPPAAAS----PRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPI--T 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    561 APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPtapkePAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKP 640
Cdd:PHA03307  265 LPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSG-----PAPSSPRASSSSSSSRESSSSSTSSSSESSRGA 339

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    641 APTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 720
Cdd:PHA03307  340 AVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDA 419

                         410
                  ....*....|
gi 1572721    721 APTTPKKPAP 730
Cdd:PHA03307  420 GAASGAFYAR 429

PRK07764

DNA polymerase III subunits gamma and tau; Validated

474-790

4.12e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 58.07 E-value: 4.12e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPS 553
Cdd:PRK07764  403 AAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAP 482

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    554 PTTTKEPAPTTPKEPAPTTPKKPAP------------------------------------------------------- 578
Cdd:PRK07764  483 APPAAPAPAAAPAAPAAPAAPAGADdaatlrerwpeilaavpkrsrktwaillpeatvlgvrgdtlvlgfstgglarrfa 562

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    579 ---------------------------TTPKEPAPTTPKEPAPTT--TKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTP 629
Cdd:PRK07764  563 spgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGppEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAA 642

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    630 EKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTP 709
Cdd:PRK07764  643 PAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPP 722

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    710 KGTApTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEP 789
Cdd:PRK07764  723 QAAQ-GASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDA 801


                  .
gi 1572721    790 A 790
Cdd:PRK07764  802 E 802

rne

PRK10811

ribonuclease E; Reviewed

384-569

4.64e-08

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 58.13 E-value: 4.64e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 463
Cdd:PRK10811  848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAP-VVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTE 926

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    464 PKEPAPTTKEP-APTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT 542
Cdd:PRK10811  927 QPQVITESDVAvAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006

                         170       180
                  ....*....|....*....|....*..
gi 1572721    543 KSAPTTPKEPSPTTTKEPAPTTPKEPA 569
Cdd:PRK10811 1007 PEATVEHNHATAPMTRAPAPEYVPEAP 1033

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

301-583

5.89e-08

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 57.39 E-value: 5.89e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    301 KEKTTSAKETQSIEKTSAKDlAPTSKVLAKPTPKAE-TTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 379
Cdd:PTZ00449  532 GEHEDSKESDEPKEGGKPGE-TKEGEVGKKPGPAKEhKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK 610

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    380 EPAPTTTKSAPTTPKEP-APTTTKEP-APTTPKEPA-PTTTKEPaptTTKSAPTTPKEP-APTTPKKPAPTTPKEPAPTT 455
Cdd:PTZ00449  611 SPKLPELLDIPKSPKRPeSPKSPKRPpPPQRPSSPErPEGPKII---KSPKPPKSPKPPfDPKFKEKFYDDYLDAAAKSK 687

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    456 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPA--PTTPKEPApTTPKEPAPTTTKEPSPTTPkePAPTTTKSAPTT 533
Cdd:PTZ00449  688 ETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPklPRDEEFPF-EPIGDPDAEQPDDIEFFTP--PEEERTFFHETP 764

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1572721    534 TKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA--PTTPKE 583
Cdd:PTZ00449  765 ADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPGdhPSLPKK 816

PRK10263

DNA translocase FtsK; Provisional

381-604

6.59e-08

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 57.40 E-value: 6.59e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    381 PAPTTTKSAPTTPKEPA---PTTTKEPAPTtPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepAPTTPK 457
Cdd:PRK10263  336 PVEPVTQTPPVASVDVPpaqPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQ---PYYAPA 411

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    458 EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKE-PSPTTPKEPAPTTTKSAPTTTKE 536
Cdd:PRK10263  412 AEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTyQQPAAQEPLYQQPQPVEQQPVVE 491

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721    537 PAPTTTKSAPTTP-----KEPSPTTTKEPAPTTP-KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTA 604
Cdd:PRK10263  492 PEPVVEETKPARPplyyfEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLA 565

PRK07003

DNA polymerase III subunit gamma/tau;

374-613

6.63e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 57.17 E-value: 6.63e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    374 APTTPKEPAPTTTKSAPTTPKEPAPTTTkEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAP 453
Cdd:PRK07003  393 ASAVPAVTAVTGAAGAALAPKAAAAAAA-TRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPP 471

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    454 TTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKepAPTTPKEPAPtttkepspttPKEPAPTTTKSAPTT 533
Cdd:PRK07003  472 ADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPA--AASREDAPAA----------AAPPAPEARPPTPAA 539

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    534 TKEPAPTTTKSAP-----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPtTPKEPAPTTTKKPAPTAPKEP 608
Cdd:PRK07003  540 AAPAARAGGAAAAldvlrNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVP-TPRARAATGDAPPNGAARAEQ 618


                  ....*
gi 1572721    609 APTTP 613
Cdd:PRK07003  619 AAESR 623

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

373-450

8.50e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.21 E-value: 8.50e-08

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

PRK07994

DNA polymerase III subunits gamma and tau; Validated

474-638

8.90e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.80 E-value: 8.90e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTttkEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPS 553
Cdd:PRK07994  366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPP---PPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    554 PTTTKEPAPtTPKEPAPTTPKKPAPTTPkePAPTTPKEPAPTTTKKPAPTAPKEPAptTPKETAPTTPKKLTPTTPEKLA 633
Cdd:PRK07994  443 PAAASRARP-VNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEVKKEPVA--TPKALKKALEHEKTPELAAKLA 517


                  ....*
gi 1572721    634 PTTPE 638
Cdd:PRK07994  518 AEAIE 522

PRK07994

DNA polymerase III subunits gamma and tau; Validated

432-589

9.61e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.80 E-value: 9.61e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    432 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 511
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    512 KEPSPTTPKEPAPTTTKSAPTTtkEPAPTTTKSAPTtPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:PRK07994  441 SEPAAASRARPVNSALERLASV--RPAPSALEKAPA-KKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAK 515

PRK12323

DNA polymerase III subunit gamma/tau;

671-882

1.45e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.04 E-value: 1.45e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    671 AAAPNTPKEPA--PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDK 748
Cdd:PRK12323  378 AAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAA 457

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    749 PAPTTPKGTAPttPKEPAPTTPKEPAPTTPkgtAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAP 828
Cdd:PRK12323  458 PAAAARPAAAG--PRPVAAAAAAAPARAAP---AAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATA 532

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1572721    829 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA 882
Cdd:PRK12323  533 DPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPALAA 586

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

379-613

1.60e-07

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 56.21 E-value: 1.60e-07

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   379 KEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepapttPKE 458
Cdd:COG5665  276 TNQLTTSNTPTSTAKAQPQPPTKKQPAKEPPSDTASG---NPSAPSVLINSDSPTSEDPATASVPTT----------EET 342

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   459 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 538
Cdd:COG5665  343 TAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVDKKVSPDSATSSTKSEKEGGTASSPMPPNIAIGAKDDVDATDPS 422

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721   539 PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTP 613
Cdd:COG5665  423 QEAKEYTKNAPMTPEADSAPESSVRTEASPSAGSDLEPENTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANETGP 497

PRK07764

DNA polymerase III subunits gamma and tau; Validated

474-839

2.56e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.38 E-value: 2.56e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTksaPTTPKEPS 553
Cdd:PRK07764  397 AAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ---PAPAPAAA 473

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    554 PTTTKEPAPTTPKEPAP-TTPKKPAPTTPKEPAPT--TPKEPAPT-----TTKKPAPTAPKEPAPT-------------- 611
Cdd:PRK07764  474 PEPTAAPAPAPPAAPAPaAAPAAPAAPAAPAGADDaaTLRERWPEilaavPKRSRKTWAILLPEATvlgvrgdtlvlgfs 553

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    612 TPKE--------------TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTP 677
Cdd:PRK07764  554 TGGLarrfaspgnaevlvTALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAA 633

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    678 KEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGT 757
Cdd:PRK07764  634 AAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ 713

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    758 APttpkEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPT 837
Cdd:PRK07764  714 AD----DPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDD 789


                  ..
gi 1572721    838 TP 839
Cdd:PRK07764  790 AP 791

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

475-583

2.76e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 55.20 E-value: 2.76e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    475 APTTPKEPAPTAPKKPAPTTPKePAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkEPAPTTTKSAPttPKEPSP 554
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVR----------------ETATPPPVPPR--PVAPPV 421

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1572721    555 TTTKEPAPTTPKE--PAPTTPKKPAPTTPKE 583
Cdd:PRK14950  422 PHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

381-508

2.79e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 55.11 E-value: 2.79e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    381 PAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 460
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1572721    461 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkEPAP 508
Cdd:PRK14951  446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARL-TPTE 492

PRK07764

DNA polymerase III subunits gamma and tau; Validated

373-721

3.59e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.99 E-value: 3.59e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    373 SAPTTPKEPAPTTTKSAPTTPKEPAPTttkePAPTTPKEPAPTTTKEPAPTTtksAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:PRK07764  388 AGGAGAPAAAAPSAAAAAPAAAPAPAA----AAPAAAAAPAPAAAPQPAPAP---APAPAPPSPAGNAPAGGAPSPPPAA 460

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAP-------------------------------- 500
Cdd:PRK07764  461 APSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDaatlrerwpeilaavpkrsrktwaillpeatv 540

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    501 -------------------------------------------------TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAp 531
Cdd:PRK07764  541 lgvrgdtlvlgfstgglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEEAARPAAPA- 619

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    532 tttkEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTttkkpAPTAPKEPAPT 611
Cdd:PRK07764  620 ----APAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPA-----APPPAPAPAAP 690

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    612 TPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPT 691
Cdd:PRK07764  691 AAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAP 770

                         410       420       430
                  ....*....|....*....|....*....|..
gi 1572721    692 TPKEPAPTTPK--ETAPTTPKGTAPTTLKEPA 721
Cdd:PRK07764  771 AAAPPPSPPSEeeEMAEDDAPSMDDEDRRDAE 802

PRK12323

DNA polymerase III subunit gamma/tau;

570-785

4.29e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 54.50 E-value: 4.29e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    570 PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETapttpkkltpttpeklAPTTPEKPAPTTPEELA 649
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAA----------------APARRSPAPEALAAARQ 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    650 PTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPtTPKKPA 729
Cdd:PRK12323  439 ASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP-AQPDAA 517

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    730 PKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 785
Cdd:PRK12323  518 PAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGL 573

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

474-577

4.45e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.90 E-value: 4.45e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKEPS 553
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAP-----------------PKPAAAAAAAAAPAAPP 100

                          90       100
                  ....*....|....*....|....
gi 1572721    554 PTTTKEPAPTTPKEPAPTTPKKPA 577
Cdd:PRK12270  101 AAAAAAAPAAAAVEDEVTPLRGAA 124

PHA03369

capsid maturational protease; Provisional

498-792

5.00e-07

capsid maturational protease; Provisional

Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 54.23 E-value: 5.00e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    498 PAPTTPKEPAPTTTKEPSPTTPKEPAPtttksaptttkEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP- 576
Cdd:PHA03369  354 TAPSRVLAAAAKVAVIAAPQTHTGPAD-----------RQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPq 422

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    577 APTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPE------KLAPTTPEKPAPTTPEELAP 650
Cdd:PHA03369  423 SPGTSYGPEPVGPVPPQPTNPYVMPISMANMVYPGHPQEHGHERKRKRGGELKEelietlKLVKKLKEEQESLAKELEAT 502

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    651 TTPEEPTPTTPEEPAPTTPKAAAPNTpkEPAPTTPkEPAPTTpKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKP-- 728
Cdd:PHA03369  503 AHKSEIKKIAESEFKNAGAKTAAANI--EPNCSAD-AAAPAT-KRARPETKTELEAVVRFPYQIRNMESPAFVHSFTStt 578

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    729 ----------APKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPT-TPKEPAPTTPKGTAPTTLKEPAPT 792
Cdd:PHA03369  579 laaaagqgsdTAEALAGAIETLLTQASAQPAGLSLPAPAVPVNASTPASTpPPLAPQEPPQPGTSAPSLETSLPQ 653

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

556-646

5.23e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 5.23e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    556 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTpkkltpttpeKLAPT 635
Cdd:PRK12270   34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAA----------PPAAA 103

                          90
                  ....*....|.
gi 1572721    636 TPEKPAPTTPE 646
Cdd:PRK12270  104 AAAAPAAAAVE 114

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

373-450

5.45e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 5.45e-07

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtttksAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:PRK12270   45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAA-----APAAPPAAAAAAAPAAAAVEDEV 117

Streccoc_I_II

NF033804

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ...

749-906

5.91e-07

Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 54.56 E-value: 5.91e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    749 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAP--TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 826
Cdd:NF033804  825 PKITKEKPTPPVAPTAPQAPTYEVEKPLEPAPVAPTYENEPTPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPTYENEP 904

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    827 AP--TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPttiHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTP 904
Cdd:NF033804  905 TPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPP---VKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTP 981


                  ..
gi 1572721    905 AA 906
Cdd:NF033804  982 PA 983

PRK12323

DNA polymerase III subunit gamma/tau;

359-573

6.45e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 54.11 E-value: 6.45e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    359 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkEPAPTTTKSAPTTPKEPAPT 438
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAL-AAARQASARGPGGAPAPAPA 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    439 TPKKPAPTTPkepaPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPtTPKEPAPTTTKEPSPTT 518
Cdd:PRK12323  454 PAAAPAAAAR----PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP-AQPDAAPAGWVAESIPD 528

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    519 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKepsptttkePAPTTPKEPAPTTP 573
Cdd:PRK12323  529 PATADPDDAFETLAPAPAAAPAPRAAAATEPV---------VAPRPPRASASGLP 574

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

748-840

7.33e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 7.33e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    748 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkgptstTSDKPAPTTPKETA 827
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-------------AAAAAAPAAPPAAA 103

                          90
                  ....*....|...
gi 1572721    828 PTTPKEPAPTTPK 840
Cdd:PRK12270  104 AAAAPAAAAVEDE 116

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

414-523

7.78e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 7.78e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    414 PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkEPAPTTPKEPAPTAPKKPAPT 493
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPA-----------------------PPAAAAPAAPPKPAAAAAAAA 94

                          90       100       110
                  ....*....|....*....|....*....|
gi 1572721    494 TPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 523
Cdd:PRK12270   95 APAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

375-508

8.19e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 53.56 E-value: 8.19e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    375 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPT 454
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAA---PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1572721    455 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPkKPAPTTPKEPAPTTPKEPAP 508
Cdd:PRK14951  443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVASA-APAPAAAPAAARLTPTEEGD 495

PHA03307

transcriptional regulator ICP4; Provisional

388-794

8.56e-07

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 54.02 E-value: 8.56e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    388 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP 467
Cdd:PHA03307   23 RPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAR 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    468 APTTKEPAPTTPKEPAPTAPkkpapttPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT 547
Cdd:PHA03307  103 EGSPTPPGPSSPDPPPPTPP-------PASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALP 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    548 TPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPT 627
Cdd:PHA03307  176 LSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENEC 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    628 TPeKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK--------------EPAPTTP 693
Cdd:PHA03307  256 PL-PRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRasssssssressssSTSSSSE 334

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    694 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEP 773
Cdd:PHA03307  335 SSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRP 414

                         410       420
                  ....*....|....*....|.
gi 1572721    774 APTTPKGTAPTTLKEPAPTTP 794
Cdd:PHA03307  415 SPLDAGAASGAFYARYPLLTP 435

PRK12323

DNA polymerase III subunit gamma/tau;

473-645

8.99e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 53.34 E-value: 8.99e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    473 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSpttPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Cdd:PRK12323  393 AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAA---ARQASARGPGGAPAPAPAPAAAPAAAARPAAAGP 469

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTttkKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKL 632
Cdd:PRK12323  470 RPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPA---QPDAAPAGWVAESIPDPATADPDDAFETLAPAPA 546

                         170
                  ....*....|...
gi 1572721    633 APTTPEKPAPTTP 645
Cdd:PRK12323  547 AAPAPRAAAATEP 559

PRK07003

DNA polymerase III subunit gamma/tau;

536-798

9.79e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 53.31 E-value: 9.79e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    536 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAP-TTTKKPAPTAPKEPAPTTPK 614
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAaAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    615 ETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 694
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASR 518

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    695 EPAPTTPKETAPTTPKgTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKePAPTTPKEPA 774
Cdd:PRK07003  519 EDAPAAAAPPAPEARP-PTPAAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPK-PAAPRVAVQV 596

                         250       260
                  ....*....|....*....|....
gi 1572721    775 PtTPKGTAPTTLKEPAPTTPKKPA 798
Cdd:PRK07003  597 P-TPRARAATGDAPPNGAARAEQA 619

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

499-615

1.17e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.89 E-value: 1.17e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    499 APTTPKEPAPTTTKEPSPTTPKepaptttksaptttkePAPTTtksaPTTPKEPSPTTTKEPAPTT-PKEPAPTTPKKPA 577
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT----------------PAPST----RPKAAAAANIPPKEPVRETaTPPPVPPRPVAPP 420

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1572721    578 PTTPKEPAPTTPKEPAPtttkkpAPTAPKEPAPTTPKE 615
Cdd:PRK14950  421 VPHTPESAPKLTRAAIP------VDEKPKYTPPAPPKE 452

rne

PRK10811

ribonuclease E; Reviewed

473-646

1.22e-06

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 53.12 E-value: 1.22e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    473 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTpkEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Cdd:PRK10811  859 REAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDV 936

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    553 S--PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA-PTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTP 629
Cdd:PRK10811  937 AvaQEVAEHAEPVVEPQDETADIEEAAETAEVVVAePEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHA 1016

                         170
                  ....*....|....*...
gi 1572721    630 EklAPTTpEKPAPT-TPE 646
Cdd:PRK10811 1017 T--APMT-RAPAPEyVPE 1031

PRK07994

DNA polymerase III subunits gamma and tau; Validated

378-556

1.50e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 52.56 E-value: 1.50e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    378 PKEPAPtttksAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepaptTPK 457
Cdd:PRK07994  361 PAAPLP-----EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLL---------AAR 426

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    458 EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPtttKEPSPTTPKEPAptttksAPTTTKEP 537
Cdd:PRK07994  427 QQLQRAQGATKAKKSEPAAASRARPVNSALERLASVRP--APSALEKAPAK---KEAYRWKATNPV------EVKKEPVA 495

                         170
                  ....*....|....*....
gi 1572721    538 APTTTKSAPTTPKEPSPTT 556
Cdd:PRK07994  496 TPKALKKALEHEKTPELAA 514

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

670-732

1.56e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.56e-06

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1572721    670 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 732
Cdd:PRK12270   52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

373-720

1.65e-06

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 52.27 E-value: 1.65e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPaptttkepaPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:pfam17823   98 SEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAAL---------PSEAFSAPRAAACRANASAAPRAAIAAASAP 168

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 532
Cdd:pfam17823  169 HAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTV 248

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     533 TTKEPApTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTtpkkPAPTTPKEPAPTTPKEPAPTTTKKpapTAPKEPAPTT 612
Cdd:pfam17823  249 TPAALA-TLAAAAGTVASAAGTINMGDPHARRLSPAKHM----PSDTMARNPAAPMGAQAQGPIIQV---STDQPVHNTA 320

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     613 PKETAPTTPKKLTPTTPEKLAPTTpekPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 692
Cdd:pfam17823  321 GEPTPSPSNTTLEPNTPKSVASTN---LAVVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGI 397

                          330       340
                   ....*....|....*....|....*...
gi 1572721     693 PKEPAPTTPKETAPTTPKGTAPTTLKEP 720
Cdd:pfam17823  398 LLAPEQVATEATAGTASAGPTPRSSGDP 425

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

515-601

1.66e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.66e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    515 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAP 594
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                  ....*..
gi 1572721    595 TTTKKPA 601
Cdd:PRK12270  118 TPLRGAA 124

PRK07994

DNA polymerase III subunits gamma and tau; Validated

560-734

1.87e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 52.56 E-value: 1.87e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    560 PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTtkkPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 639
Cdd:PRK07994  366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPP---PASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    640 PAPTTPEElapttpeeptPTTPEEPAPTTPKAAAPNTPKEPApttPKEPAPTTPKEPAPTtpKETAPTTPKGTAPTTLKE 719
Cdd:PRK07994  443 PAAASRAR----------PVNSALERLASVRPAPSALEKAPA---KKEAYRWKATNPVEV--KKEPVATPKALKKALEHE 507

                         170
                  ....*....|....*
gi 1572721    720 PAPTTPKKPAPKELA 734
Cdd:PRK07994  508 KTPELAAKLAAEAIE 522

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

696-787

2.20e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.59 E-value: 2.20e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    696 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 775
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117

                          90
                  ....*....|..
gi 1572721    776 TTPKGTAPTTLK 787
Cdd:PRK12270  118 TPLRGAAAAVAK 129

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

513-591

2.45e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 2.45e-06

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721    513 EPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 591
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

374-450

2.53e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 2.53e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    374 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP-----TTPKEPAPTTTKEPAPTTTKSAPTTPKE--PAPTTPKKPAPT 446
Cdd:PRK14950  369 AKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEpvretATPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPA 448


                  ....
gi 1572721    447 TPKE 450
Cdd:PRK14950  449 PPKE 452

rne

PRK10811

ribonuclease E; Reviewed

427-611

2.56e-06

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 52.35 E-value: 2.56e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    427 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTkEPAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEP 506
Cdd:PRK10811  844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV-EAVAEVVEEPVVVAE--PQPEEVVVVETTHPEVI 920

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    507 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 586
Cdd:PRK10811  921 AAPVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPE 1000

                         170       180
                  ....*....|....*....|....*..
gi 1572721    587 TTPKEPAPTTTKKPAPTAP--KEPAPT 611
Cdd:PRK10811 1001 VAPAQVPEATVEHNHATAPmtRAPAPE 1027

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

474-589

2.78e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.02 E-value: 2.78e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAP-KKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1572721    553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:PRK14951  456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PHA03378

EBNA-3B; Provisional

401-802

2.79e-06

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 51.99 E-value: 2.79e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    401 TKEPAPTtPKEPAPTTTKEPAPTTTKSAPTTP-KEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 479
Cdd:PHA03378  438 TEQPRAT-PHSQAPTVVLHRPPTQPLEGPTGPlSVQAPLEPWQPLPHPQVTPVILHQPPAQGVQAHGSMLDLLEKDDEDM 516

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    480 KEPAPTAPKKPAPTTPK--EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTpKEPSPTTT 557
Cdd:PHA03378  517 EQRVMATLLPPSPPQPRagRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLGPLQIQPLTSPTTSQLAS-SAPSYAQT 595

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    558 KEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEklAPTTP 637
Cdd:PHA03378  596 PWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQ--IGHIP 673

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    638 EKPAPTTPeelapttpeeptpttpeepAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTL 717
Cdd:PHA03378  674 YQPSPTGA-------------------NTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRA 734

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    718 KEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKE----PAPTTPKGTAPTT--LKEPAP 791
Cdd:PHA03378  735 RPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRprgaPTPQPPPQAGPTSmqLMPRAA 814

                         410
                  ....*....|.
gi 1572721    792 TTPKKPAPKEL 802
Cdd:PHA03378  815 PGQQGPTKQIL 825

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

688-790

3.08e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 3.08e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    688 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkeptstTSDKPAPTTPKGTAPTTPKEPAP 767
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPA-------------APPKPAAAAAAAAAPAAPPAAAA 104

                          90       100
                  ....*....|....*....|...
gi 1572721    768 TTPKEPAPTTPKgtaPTTLKEPA 790
Cdd:PRK12270  105 AAAPAAAAVEDE---VTPLRGAA 124

PHA03307

transcriptional regulator ICP4; Provisional

320-697

3.19e-06

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.10 E-value: 3.19e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    320 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPT 399
Cdd:PHA03307   69 TGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPP 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    400 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepAPTTPKEPTPTTPKEPAPTTKEPAPTTP 479
Cdd:PHA03307  149 AASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPST---PPAAASPRPPRRSSPISASASSPAPAPG 225

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    480 KEPAPTAPKKPAPTTPKEPAPTTPKEpaptTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPtttkE 559
Cdd:PHA03307  226 RSAADDAGASSSDSSSSESSGCGWGP----ENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSP----S 297

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    560 PAPTTPKEPAPTTPKK-------------PAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTP 626
Cdd:PHA03307  298 PSPSSPGSGPAPSSPRasssssssresssSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSS 377

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572721    627 TTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 697
Cdd:PHA03307  378 PAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSGEPWPGSPPPPP 448

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

671-788

3.21e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 3.21e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTtpkgTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:PRK14951  378 KKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAP----AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1572721    751 PTTPKGTAP--TTPKEPAPTTPKEPAPTTPKGTAPTTLKE 788
Cdd:PRK14951  454 QAAPETVAIpvRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

413-509

3.62e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.81 E-value: 3.62e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    413 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPApttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAP 492
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAA---------------------AAPAAPPKPAAAAAAAAAP 96

                          90
                  ....*....|....*..
gi 1572721    493 TTPKEPAPTTPKEPAPT 509
Cdd:PRK12270   97 AAPPAAAAAAAPAAAAV 113

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

483-613

3.91e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 3.91e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    483 APTAPKKPAPTTPKEPAPTTP-KEPAPTTTKEPSPTTPkepaptttksaptttkEPAPTTTKSAPTTPKEPSPTTTKEPA 561
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPAAA----------------PAAAASAPAAPPAAAPPAPVAAPAAA 432

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1572721    562 PTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTP 613
Cdd:PRK14951  433 APAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPA 484

PRK10263

DNA translocase FtsK; Provisional

397-610

4.38e-06

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 51.62 E-value: 4.38e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTtPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 476
Cdd:PRK10263  324 AAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQ 402

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    477 TTPKEPAPTAPKK-------PAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP-APTTTKSAPTTTKEPAPTTTKSAPTT 548
Cdd:PRK10263  403 PQQPYYAPAAEQPaqqpyyaPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTfAPQSTYQTEQTYQQPAAQEPLYQQPQ 482

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    549 PKEPSPTttKEPAPTTpKEPAPTTPK----------------------KPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPK 606
Cdd:PRK10263  483 PVEQQPV--VEPEPVV-EETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAA 559


                  ....
gi 1572721    607 EPAP 610
Cdd:PRK10263  560 AVSP 563

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

373-497

4.67e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.96 E-value: 4.67e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKePAPTTtkepAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepa 452
Cdd:PRK14950  345 SYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPT-PAPST----RPKAAAAANIPPKEPVRETATPPPVPPR---- 415

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1572721    453 pttpkeptptTPKEPAPTTKEPAPTTPKE--PAPTAPKKPAPTTPKE 497
Cdd:PRK14950  416 ----------PVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PHA03307

transcriptional regulator ICP4; Provisional

475-843

4.91e-06

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.33 E-value: 4.91e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    475 APTTPKEPAPTAPKKPAPTTPKEPAPTTpkEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT-KSAPTTPKEPS 553
Cdd:PHA03307   24 PPATPGDAADDLLSGSQGQLVSDSAELA--AVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTwSLSTLAPASPA 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    554 PTTTKEPAPTTPKEPAPTT--PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEK 631
Cdd:PHA03307  102 REGSPTPPGPSSPDPPPPTppPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEE 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    632 LAPTTPEKPAPTTPEelapttpeeptpttpeepapttpkaaAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKG 711
Cdd:PHA03307  182 TARAPSSPPAEPPPS--------------------------TPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGAS 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    712 TAPTTLKEPApttPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAP 791
Cdd:PHA03307  236 SSDSSSSESS---GCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSP 312

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1572721    792 TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETA--PTTPKEPAPTTPKKPA 843
Cdd:PHA03307  313 RASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSrsPSPSRPPPPADPSSPR 366

PRK07994

DNA polymerase III subunits gamma and tau; Validated

373-516

4.98e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 51.02 E-value: 4.98e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP--KEPAPTTPKKPAPTTPKE 450
Cdd:PRK07994  369 EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKKSEPAAASR 448

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    451 PAPTTPKEPTPTTPKEPAPTTkePAPTTPKEPAPTAPKKPAPTtpKEPAPTTPKEPAPTTTKEPSP 516
Cdd:PRK07994  449 ARPVNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

486-615

5.00e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.87 E-value: 5.00e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    486 APKKPAPTTPKEPAPTTPKEPAPtttkEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 565
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPAA----APVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1572721    566 KEPAPTTPKKPAPTTPKEPAPTTPkEPAPTTTKKPAPTAPKEPAPTTPKE 615
Cdd:PRK14951  445 VALAPAPPAQAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

568-647

5.53e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 5.53e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    568 PAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEE 647
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

545-647

5.84e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.58 E-value: 5.84e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    545 APTTPKEPSPTTTKEPAPTTPKePAPTTPKKPAPTTPKEPAP----TTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPtt 620
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEpvreTATPPPVPPRPVAPPVPHTPESAPKLTRAAIP-- 437

                          90       100
                  ....*....|....*....|....*..
gi 1572721    621 pkkltpttpeklAPTTPEKPAPTTPEE 647
Cdd:PRK14950  438 ------------VDEKPKYTPPAPPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

398-512

6.71e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 6.71e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    398 PTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkEPAPT 477
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-----------------------AAAAA 94

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1572721    478 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTK 512
Cdd:PRK12270   95 APAAPPAAAAAAAPAAAAVEDEVTPLRGAAAAVAK 129

PRK07994

DNA polymerase III subunits gamma and tau; Validated

470-613

7.01e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 50.63 E-value: 7.01e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    470 TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP 549
Cdd:PRK07994  367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAA 446

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721    550 KEPSPTTT-----KEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTP 613
Cdd:PRK07994  447 SRARPVNSalerlASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAK 515

PRK12323

DNA polymerase III subunit gamma/tau;

554-762

7.23e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 50.64 E-value: 7.23e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    554 PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTttkKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLA 633
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAA---RAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    634 PTTPEKPAPTTPEelAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP--TTPKEPAPTTPKEPAPT-TPKETAPTTPK 710
Cdd:PRK12323  452 PAPAAAPAAAARP--AAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPweELPPEFASPAPAQPDAApAGWVAESIPDP 529

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1572721    711 GTAPTTLKEPAPTTPKKPAPKELAPTTTKEPtsttsdkPAPTTPKGTAPTTP 762
Cdd:PRK12323  530 ATADPDDAFETLAPAPAAAPAPRAAAATEPV-------VAPRPPRASASGLP 574

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

394-710

8.74e-06

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 50.46 E-value: 8.74e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    394 KEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSApTTPKEPapttpKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKE 473
Cdd:PTZ00449  506 KHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKES-DEPKEG-----GKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKP 579

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKepAPTAPKKP----APTTPKEP-APTTPKEPA----PTTTKEP-SPTTPKEPAPTTTKSAPTTTKEPAPTTTK 543
Cdd:PTZ00449  580 EFPKDPK--HPKDPEEPkkpkRPRSAQRPtRPKSPKLPElldiPKSPKRPeSPKSPKRPPPPQRPSSPERPEGPKIIKSP 657

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    544 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPA--PTTPKETapttp 621
Cdd:PTZ00449  658 KPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPklPRDEEFP----- 732

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    622 kklTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKaaapnTPKEPAPTTPKEPAPTTPKEPAPTTP 701
Cdd:PTZ00449  733 ---FEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFK-----EEDIHAETGEPDEAMKRPDSPSEHED 804

                         330
                  ....*....|.
gi 1572721    702 KETA--PTTPK 710
Cdd:PTZ00449  805 KPPGdhPSLPK 815

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

384-450

9.90e-06

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 49.51 E-value: 9.90e-06

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721     384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT-PKKPAPTTPKE 450
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVPSS 142

PRK07003

DNA polymerase III subunit gamma/tau;

567-828

1.19e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.85 E-value: 1.19e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    567 EPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPE 646
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    647 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTP----KEPAPT---TPKETAPTTPKGTAPTTLKE 719
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPpdaaFEPAPRaaaPSAATPAAVPDARAPAAASR 518

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    720 P-APTTPKKPAPKELAPTTTKEPTSTTSDKPAP------------TTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTtl 786
Cdd:PRK07003  519 EdAPAAAAPPAPEARPPTPAAAAPAARAGGAAAaldvlrnagmrvSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQV-- 596

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1572721    787 kepapTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAP 828
Cdd:PRK07003  597 -----PTPRARAATGDAPPNGAARAEQAAESRGAPPPWEDIP 633

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

553-630

1.22e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.89 E-value: 1.22e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPE 630
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

673-779

1.24e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.81 E-value: 1.24e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    673 APNTPKEPAPTTPKEPAPTTPKePAPTTPKETAPTTPkgtAPTTLKEPAPTTPKKPAPKELAptttkeptsttsdkPAPT 752
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAAN---IPPKEPVRETATPPPVPPRPVA--------------PPVP 422

                          90       100
                  ....*....|....*....|....*....
gi 1572721    753 TPKGTAPTTPKE--PAPTTPKEPAPTTPK 779
Cdd:PRK14950  423 HTPESAPKLTRAaiPVDEKPKYTPPAPPK 451

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

405-521

1.31e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.81 E-value: 1.31e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    405 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkEPAPTTPKEPAP 484
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVR------------------------ETATPPPVPPRP 416

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1572721    485 TAPKKPaptTPKEPAPTTPKE--PAPTTTKEPSPTTPKE 521
Cdd:PRK14950  417 VAPPVP---HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

495-725

1.34e-05

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 49.54 E-value: 1.34e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    495 PKEPAPTTPKEPAPTTTKEPSPTTP---KEPAPTTTKSAPTTTKEPAPTTTKSaPTTPKEPSPTTTKEPAPTTPKEPAPT 571
Cdd:PLN03209  330 PKESDAADGPKPVPTKPVTPEAPSPpieEEPPQPKAVVPRPLSPYTAYEDLKP-PTSPIPTPPSSSPASSKSVDAVAKPA 408

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    572 TPKkpAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPApTTPEELAPT 651
Cdd:PLN03209  409 EPD--VVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVPD-TAPATAATD 485

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721    652 TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKepAPTTPKETAPTTPKGTAPTTLKEPAPTTP 725
Cdd:PLN03209  486 AAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNE--VVKVGNSAPPTALADEQHHAQPKPRPLSP 557

rne

PRK10811

ribonuclease E; Reviewed

398-609

1.40e-05

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 49.65 E-value: 1.40e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    398 PTTTKEPAPTTPKEPAPTTTKEPA-PTTTKSAPTTPKEPAPTTPkkPAPTTPKEPAPTtpkeptpttpkepapttKEPAP 476
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVvAEVPVAAAVEPVVSAPVVE--AVAEVVEEPVVV-----------------AEPQP 906

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    477 TTPKEPAPTAPKKPAPTTPKEPAPTTPKEP--APTTTKEPSPTTPKEPaptttksapttTKEPAPTTTKSAPTTPKEPsP 554
Cdd:PRK10811  907 EEVVVVETTHPEVIAAPVTEQPQVITESDVavAQEVAEHAEPVVEPQD-----------ETADIEEAAETAEVVVAEP-E 974

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    555 TTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE-----PAPtTTKKPAPTAPKEPA 609
Cdd:PRK10811  975 VVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVehnhaTAP-MTRAPAPEYVPEAP 1033

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

671-732

1.70e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.50 E-value: 1.70e-05

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1572721    671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 732
Cdd:PRK12270   45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA 106

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

681-788

1.91e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 1.91e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    681 APTTPKEPAPTTPKEPAPTTPKeTAPTTPKGTAPTTLKEPAPTTPKkPAPKElaptttkeptsttsdkPAPTTPKGTAPT 760
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRE-TATPP----------------PVPPRPVAPPVP 422

                          90       100       110
                  ....*....|....*....|....*....|
gi 1572721    761 TPKEPAPTTPKE--PAPTTPKGTAPTTLKE 788
Cdd:PRK14950  423 HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK12323

DNA polymerase III subunit gamma/tau;

317-510

2.10e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.10 E-value: 2.10e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    317 SAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKeP 396
Cdd:PRK12323  378 AAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPA-A 456

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT-TPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPA 475
Cdd:PRK12323  457 APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPApADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDD 536

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1572721    476 PTTPKEPAPTAPKKPAPTTPKEP--APTTPKEPAPTT 510
Cdd:PRK12323  537 AFETLAPAPAAAPAPRAAAATEPvvAPRPPRASASGL 573

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

537-617

2.14e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 2.14e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    537 PAPTTTKSAPTTPKEPSPTTTKEPaPTTPKEPAPTTPKKPAPTTPkEPAPTTPKEPAPTTTKKPAPTAPKE--PAPTTPK 614
Cdd:PRK14950  366 PQPAKPTAAAPSPVRPTPAPSTRP-KAAAAANIPPKEPVRETATP-PPVPPRPVAPPVPHTPESAPKLTRAaiPVDEKPK 443


                  ...
gi 1572721    615 ETA 617
Cdd:PRK14950  444 YTP 446

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

705-801

2.47e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.12 E-value: 2.47e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    705 APTTPKGTAPTTLKEPAPTTPKKPapkelaptttkeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPT 784
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAA--------------------PAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPA 97

                          90
                  ....*....|....*..
gi 1572721    785 TLKEPAPTTPKKPAPKE 801
Cdd:PRK12270   98 APPAAAAAAAPAAAAVE 114

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

489-598

2.49e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.12 E-value: 2.49e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    489 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 568
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAP-----------------AAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAP 99

                          90       100       110
                  ....*....|....*....|....*....|
gi 1572721    569 APTTPKKPAPTTPKEPAPTTPKEPAPTTTK 598
Cdd:PRK12270  100 PAAAAAAAPAAAAVEDEVTPLRGAAAAVAK 129

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

671-800

2.49e-05

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 48.22 E-value: 2.49e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:NF040712  200 ATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGE 279

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1572721    751 PTTPKGTAPTTPKEPAPTTPKEPA-PTTPKGTAPTTLKEPAPTTPKKPAPK 800
Cdd:NF040712  280 PPAPGAAETPEAAEPPAPAPAAPAaPAAPEAEEPARPEPPPAPKPKRRRRR 330

PRK07994

DNA polymerase III subunits gamma and tau; Validated

536-698

2.54e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 48.71 E-value: 2.54e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    536 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKE 615
Cdd:PRK07994  363 APLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    616 TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 695
Cdd:PRK07994  443 PAAASRARPVNSALERLASVRPAPSALEKAPA---------------KKEAYRWKATNPVEVKKEPVATPKALKKALEHE 507


                  ...
gi 1572721    696 PAP 698
Cdd:PRK07994  508 KTP 510

PRK07764

DNA polymerase III subunits gamma and tau; Validated

311-522

2.55e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.83 E-value: 2.55e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    311 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTtikSAPTTPKEPAPTTTKSAP 390
Cdd:PRK07764  572 TALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA---GAAAAPAEASAAPAPGVA 648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    391 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 470
Cdd:PRK07764  649 APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA 728

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1572721    471 TKEPAPTTPKEPAPTAPKKP--APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 522
Cdd:PRK07764  729 SAPSPAADDPVPLPPEPDDPpdPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

372-444

3.15e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.73 E-value: 3.15e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1572721    372 KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPA 444
Cdd:PRK12270   52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

748-843

3.55e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.35 E-value: 3.55e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    748 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkgptsttsdKPAPTTPKETA 827
Cdd:PRK12270   45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPA----------------APPAAAAAAAP 108

                          90
                  ....*....|....*.
gi 1572721    828 PTTPKEPAPTTPKKPA 843
Cdd:PRK12270  109 AAAAVEDEVTPLRGAA 124

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

536-648

3.84e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 3.84e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    536 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTP---KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTT 612
Cdd:PRK14951  377 EKKTPARPEAAAPAAAPVAQAAAAPAPAAApaaAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAA 456

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1572721    613 PKETAPTTPKKLTPTTPE-KLAPTTPEKPAPTTPEEL 648
Cdd:PRK14951  457 PETVAIPVRVAPEPAVASaAPAPAAAPAAARLTPTEE 493

PRK07764

DNA polymerase III subunits gamma and tau; Validated

561-923

3.96e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.06 E-value: 3.96e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    561 APTTPKEPAPTTPKKPAPT---TPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPeklAPTTP 637
Cdd:PRK07764  389 GGAGAPAAAAPSAAAAAPAaapAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAA---APSAQ 465

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    638 EKPAPTTPEElapttpeeptpttpeepaptTPKAAAPNTPKEPAP-TTPKEPAPTTPKEPAPTTP---------KETAPT 707
Cdd:PRK07764  466 PAPAPAAAPE--------------------PTAAPAPAPPAAPAPaAAPAAPAAPAAPAGADDAAtlrerwpeiLAAVPK 525

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    708 TPKGTAPTTLKEPAPT------------------------------------------------TPKKPAPKELAPTTTK 739
Cdd:PRK07764  526 RSRKTWAILLPEATVLgvrgdtlvlgfstgglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPAS 605

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    740 EPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPA-PKELAPTTTKGPTSTTSDKP 818
Cdd:PRK07764  606 SGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDgGDGWPAKAGGAAPAAPPPAP 685

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    819 APTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELsaEPTPKALENSPKEPGV 898
Cdd:PRK07764  686 APAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDD--PPDPAGAPAQPPPPPA 763

                         410       420
                  ....*....|....*....|....*
gi 1572721    899 PTTKTPAATKPEMTTTAKDKTTERD 923
Cdd:PRK07764  764 PAPAAAPAAAPPPSPPSEEEEMAED 788

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

538-610

4.28e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 48.02 E-value: 4.28e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    538 APTTTKSAPTTPKEPSPtttkePAPTTPKEPAPTTPKKPAPTTPKEPAP---TTPKEPAPTTTKKPAPTAPKEPAP 610
Cdd:PRK14954  381 APSPAGSPDVKKKAPEP-----DLPQPDRHPGPAKPEAPGARPAELPSPasaPTPEQQPPVARSAPLPPSPQASAP 451

PHA03247

large tegument protein UL36; Provisional

255-610

4.38e-05

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.40 E-value: 4.38e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    255 AKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPK 334
Cdd:PHA03247 2734 ALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA 2813

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    335 AETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKS----APTTP--KEPAPTTTKSAPTTPKEPAPTTTKEPAPTT 408
Cdd:PHA03247 2814 PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLggsvAPGGDvrRRPPSRSPAAKPAAPARPPVRRLARPAVSR 2893

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    409 PKEPAPTTTKEPAPtttksaPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPtTPKEPAP---- 484
Cdd:PHA03247 2894 STESFALPPDQPER------PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEP-SGAVPQPwlga 2966

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    485 TAPKKPAPTTPKEPAPTTPKE-PAPTTtkePSPTTPKEPAPTTTKSAPTTTKEPAP-----TTTKSAPTTPKEPSPTTTK 558
Cdd:PHA03247 2967 LVPGRVAVPRFRVPQPAPSREaPASST---PPLTGHSLSRVSSWASSLALHEETDPppvslKQTLWPPDDTEDSDADSLF 3043

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1572721    559 EPAPTTPKEPAPttpkKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAP 610
Cdd:PHA03247 3044 DSDSERSDLEAL----DPLPPEPHDPFAHEPDPATPEAGARESPSSQFGPPP 3091

PRK10263

DNA translocase FtsK; Provisional

484-729

4.55e-05

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 48.16 E-value: 4.55e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    484 PTAPKKPAPTTPKEPAPTT--------PKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 555
Cdd:PRK10263  339 PVTQTPPVASVDVPPAQPTvawqpvpgPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQ 418

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    556 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP-APTTTKKPAPTAPkEPAPTTPKETAPTTPKKLTPTTPEKLA- 633
Cdd:PRK10263  419 PYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTfAPQSTYQTEQTYQ-QPAAQEPLYQQPQPVEQQPVVEPEPVVe 497

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    634 PTTPEKPAPTTPEELAPTTPEEPTPTTPEEPApttpkaaAPNTPKEPAPTTPKEPAPTTPKEPaPTTPKETAPTTPKGTA 713
Cdd:PRK10263  498 ETKPARPPLYYFEEVEEKRAREREQLAAWYQP-------IPEPVKEPEPIKSSLKAPSVAAVP-PVEAAAAVSPLASGVK 569

                         250
                  ....*....|....*.
gi 1572721    714 PTTLKEPAPTTPKKPA 729
Cdd:PRK10263  570 KATLATGAAATVAAPV 585

rne

PRK10811

ribonuclease E; Reviewed

476-689

4.99e-05

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 48.11 E-value: 4.99e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    476 PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTtksaptttkEPAPTTtksapttpkEPSPT 555
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVE---------EPVVVA---------EPQPE 907

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    556 TTKEPAPTTPKEPAPTTPKKPAPTTPKEP--APTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKltpttpeklA 633
Cdd:PRK10811  908 EVVVVETTHPEVIAAPVTEQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVA---------Q 978

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    634 PTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTpKEPAPTTPKEPA 689
Cdd:PRK10811  979 PAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHATAPMT-RAPAPEYVPEAP 1033

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

540-607

5.12e-05

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 47.20 E-value: 5.12e-05

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721     540 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKE 607
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142

PRK14948

DNA polymerase III subunit gamma/tau;

409-608

5.24e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 47.65 E-value: 5.24e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    409 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepaPTTKEPAPTTPKEPAPTAPK 488
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--------------------TPSPPPAKASPPIPVPAEPT 422

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    489 KPAPTTPKEPAPTTPKE-------------PAPTT--------------------------------------------- 510
Cdd:PRK14948  423 EPSPTPPANAANAPPSLnleelwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvl 502

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    511 ---------TKEPSPTTPKEPaptttksaptttkePAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 581
Cdd:PRK14948  503 grsiklnleSQSGSASNTAKT--------------PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPA 568

                         250       260
                  ....*....|....*....|....*..
gi 1572721    582 KEPAPTTPkEPAPTTTKKPAPTAPKEP 608
Cdd:PRK14948  569 QIPADSSP-PPPIPEEPTPSPTKDSSP 594

PRK14948

DNA polymerase III subunit gamma/tau;

474-648

5.42e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 47.65 E-value: 5.42e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTkePSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP---- 549
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnlee 443

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    550 ---------------------------------------------------------------------KEPSPTTTKEP 560
Cdd:PRK14948  444 lwqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesQSGSASNTAKT 523

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    561 APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETapttpkkltpttpeklaPTTPEKP 640
Cdd:PRK14948  524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPP-----------------IPEEPTP 586


                  ....*...
gi 1572721    641 APTTPEEL 648
Cdd:PRK14948  587 SPTKDSSP 594

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1151-1193

5.97e-05

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 41.84 E-value: 5.97e-05

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 1572721     1151 VDGLTTLRNGTLVAFRGHYFWMLSPFSP-PSPARRITEVW-GIPS 1193
Cdd:smart00120    1 IDAAFELRDGKTYFFKGDKYWRFDPKRVdPGYPKLISSFFpGLPC 45

COG5373

Uncharacterized membrane protein [Function unknown];

388-450

6.16e-05

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 47.69 E-value: 6.16e-05

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1572721   388 SAPTTPKEPAPtttkePAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:COG5373   42 EAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAA 99

PRK14948

DNA polymerase III subunit gamma/tau;

373-450

6.21e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 47.65 E-value: 6.21e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:PRK14948  516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593

PRK12323

DNA polymerase III subunit gamma/tau;

341-551

7.19e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.18 E-value: 7.19e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    341 GPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP 420
Cdd:PRK12323  373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    421 APTttkSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAP 500
Cdd:PRK12323  453 APA---AAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDP 529

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1572721    501 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 551
Cdd:PRK12323  530 ATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGD 580

PRK07994

DNA polymerase III subunits gamma and tau; Validated

639-803

7.68e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 47.17 E-value: 7.68e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    639 KPAPTTPEelAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTP----KGTAP 714
Cdd:PRK07994  360 HPAAPLPE--PEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqraQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    715 TTLKEPAPTTPKKPAPKELAptttKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTP 794
Cdd:PRK07994  438 AKKSEPAAASRARPVNSALE----RLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELA 513


                  ....*....
gi 1572721    795 KKPAPKELA 803
Cdd:PRK07994  514 AKLAAEAIE 522

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

548-615

7.78e-05

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 46.81 E-value: 7.78e-05

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721     548 TPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKE 615
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

520-617

8.14e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.77 E-value: 8.14e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   520 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT--PKEPAPTTT 597
Cdd:COG3266  256 KAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAP 335

                         90       100
                 ....*....|....*....|.
gi 1572721   598 KKPAP-TAPKEPAPTTPKETA 617
Cdd:COG3266  336 AAPAPeAAAAAAAPAAPAVAK 356

PRK10905

cell division protein DamX; Validated

499-612

8.39e-05

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 46.47 E-value: 8.39e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    499 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP-----APTTPKEPAPTTP 573
Cdd:PRK10905  104 ALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIEPkkpqaTAKTEPKPVAQTP 183

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1572721    574 KKPAPTTPKEPAPTtpkePAPTTTKKPAPTAPKEPAPTT 612
Cdd:PRK10905  184 KRTEPAAPVASTKA----PAATSTPAPKETATTAPVQTA 218

PRK07003

DNA polymerase III subunit gamma/tau;

322-594

8.64e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 8.64e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    322 APTSKVLAKPTPKAETttkgPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPA-PTT 400
Cdd:PRK07003  401 AVTGAAGAALAPKAAA----AAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPAdSGS 476

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    401 TKEPAPTTPkepaPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTtpkepapttpkeptpttpkepaptTKEPAPttPK 480
Cdd:PRK07003  477 ASAPASDAP----PDAAFEPAPRAAAPSAATPAAVPDARAPAAASR------------------------EDAPAA--AA 526

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    481 EPAPTAPkKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAptTTKSAPTTPKEPSPtttkep 560
Cdd:PRK07003  527 PPAPEAR-PPTPAAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAA--APKPAAPRVAVQVP------ 597

                         250       260       270
                  ....*....|....*....|....*....|....
gi 1572721    561 aptTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAP 594
Cdd:PRK07003  598 ---TPRARAATGDAPPNGAARAEQAAESRGAPPP 628

PRK07994

DNA polymerase III subunits gamma and tau; Validated

503-646

9.42e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.78 E-value: 9.42e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    503 PKEPAPTTtkePSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTP--KKPAPTT 580
Cdd:PRK07994  361 PAAPLPEP---EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATK 437

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721    581 PKEPAPTTPKEPAPTTT-----KKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT---TPE 646
Cdd:PRK07994  438 AKKSEPAAASRARPVNSalerlASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEhekTPE 511

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

376-440

9.49e-05

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 46.43 E-value: 9.49e-05

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721     376 TTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT-PKEPAPTTP 440
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVP 140

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

536-682

1.07e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.63 E-value: 1.07e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    536 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK-KPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPK 614
Cdd:PRK14951  371 EAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPA 450

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    615 ETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeelapttpeeptpttpeepapttPKAAAPNTPKEPAP 682
Cdd:PRK14951  451 PPAQAAPETVAIPVRVAPEPAVASAAPAPAA-----------------------APAAARLTPTEEGD 495

PRK07994

DNA polymerase III subunits gamma and tau; Validated

404-578

1.17e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.78 E-value: 1.17e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    404 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepaPTTKEPAPTTPKEPA 483
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPAS--------------------APQQAPAVPLPETTS 420

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    484 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT-----TPKEPAPTTtkSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Cdd:PRK07994  421 QLLAARQQLQRAQGATKAKKSEPAAASRARPVNSalerlASVRPAPSA--LEKAPAKKEAYRWKATNPVEVKKEPVATPK 498

                         170       180
                  ....*....|....*....|
gi 1572721    559 EPAPTTPKEPAPTTPKKPAP 578
Cdd:PRK07994  499 ALKKALEHEKTPELAAKLAA 518

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

575-647

1.22e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.81 E-value: 1.22e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1572721    575 KPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEE 647
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

392-488

1.22e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.81 E-value: 1.22e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    392 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepaPTT 471
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAP-------------------AAP 99

                          90
                  ....*....|....*..
gi 1572721    472 KEPAPTTPKEPAPTAPK 488
Cdd:PRK12270  100 PAAAAAAAPAAAAVEDE 116

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

305-608

1.26e-04

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 46.49 E-value: 1.26e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     305 TSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPA-----LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 379
Cdd:pfam17823   97 LSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAalpseAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPR 176

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     380 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTT----TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTT 455
Cdd:pfam17823  177 TAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHpaagTALAAVGNSSPAAGTVTAAVGTVTPAALATL 256

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     456 PKEPTPTTPKEPAPTTKEPAPTTPKE----PAPTAPKKPAPTTPKEPAPTTPK----EPAPTTTKEPSPTTPKEPAPTTT 527
Cdd:pfam17823  257 AAAAGTVASAAGTINMGDPHARRLSPakhmPSDTMARNPAAPMGAQAQGPIIQvstdQPVHNTAGEPTPSPSNTTLEPNT 336

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     528 KSAPTTTKEPAPTTTKSA---PTTPKEPSPTTTKEP-----APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 599
Cdd:pfam17823  337 PKSVASTNLAVVTTTKAQakePSASPVPVLHTSMIPeveatSPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAG 416


                   ....*....
gi 1572721     600 PAPTAPKEP 608
Cdd:pfam17823  417 PTPRSSGDP 425

rne

PRK10811

ribonuclease E; Reviewed

374-561

1.31e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 46.57 E-value: 1.31e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    374 APTTPKEPAPTTTKSAPTTpkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTpKEPAPTTPkkpapttpkepap 453
Cdd:PRK10811  870 VAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVT-EQPQVITE------------- 933

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    454 ttpkeptpTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA-PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 532
Cdd:PRK10811  934 --------SDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAePEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005

                         170       180
                  ....*....|....*....|....*....
gi 1572721    533 TTKEPAPTTTKSAPTTpKEPSPTTTKEPA 561
Cdd:PRK10811 1006 VPEATVEHNHATAPMT-RAPAPEYVPEAP 1033

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

490-617

1.32e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.25 E-value: 1.32e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    490 PAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAptttksaptttkEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPkEPA 569
Cdd:PRK14951  371 EAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPA------------AAPAAAASAPAAPPAAAPPAPVAAPAAAAP-AAA 437

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1572721    570 PTTPKKPAPTTPKEPAPTTPK--EPAPTTTKKPAPTAPKEPAPTTPKETA 617
Cdd:PRK14951  438 PAAAPAAVALAPAPPAQAAPEtvAIPVRVAPEPAVASAAPAPAAAPAAAR 487

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

427-554

1.45e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.25 E-value: 1.45e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    427 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 506
Cdd:PRK14951  368 AAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVAL 447

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1572721    507 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSP 554
Cdd:PRK14951  448 APAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495

PRK14948

DNA polymerase III subunit gamma/tau;

472-616

1.61e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 46.11 E-value: 1.61e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    472 KEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKE------PAPTT---- 541
Cdd:PRK14948  382 NPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEELWQqilaklELPSTrmll 461

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    542 ---------------------------------------------------TKSAPTTPKEPSPTTTKEPAPTTPKEPAP 570
Cdd:PRK14948  462 sqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesQSGSASNTAKTPPPPQKSPPPPAPTPPLP 541

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1572721    571 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKET 616
Cdd:PRK14948  542 QPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPS 587

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

382-799

1.63e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 46.45 E-value: 1.63e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     382 APTTTKSAPTTPKepAPTTTKEPAPTTPK-EPAPTTTKEPAPTTTKSAPTTPkEPAP----TTPKKPAPTTPKEPAPTTP 456
Cdd:pfam05109  441 APNTTTGLPSSTH--VPTNLTAPASTGPTvSTADVTSPTPAGTTSGASPVTP-SPSPrdngTESKAPDMTSPTSAVTTPT 517

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     457 KEPTPTTpkepapttkePAPTTPkepaptAPKKPAPTTPKEPAPTTPKEPAP-TTTKEPSPTTPKEPAPtttksaptttk 535
Cdd:pfam05109  518 PNATSPT----------PAVTTP------TPNATSPTLGKTSPTSAVTTPTPnATSPTPAVTTPTPNAT----------- 570

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     536 epAPTTTKSAPTtpkepSPTTTKEPAPTTPKePAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTtpke 615
Cdd:pfam05109  571 --IPTLGKTSPT-----SAVTTPTPNATSPT-VGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITS---- 638

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     616 TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 695
Cdd:pfam05109  639 SSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTS 718

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     696 PAPTTPKETAPTTPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPK 771
Cdd:pfam05109  719 TKPGEVNVTKGTPPKNAtspqAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTTDYGGDSTTPRTRYNATTY 798

                          410       420
                   ....*....|....*....|....*...
gi 1572721     772 EPAPTTPKGTAPTTLKEPAPTTPKKPAP 799
Cdd:pfam05109  799 LPPSTSSKLRPRWTFTSPPVTTAQATVP 826

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

472-589

1.65e-04

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 43.12 E-value: 1.65e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     472 KEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPaptttksaptttkepaptttksAPTTPKE 551
Cdd:pfam02389   28 KVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVP----------------------EPCSPKV 85

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 1572721     552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:pfam02389   86 PEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

564-645

1.92e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.04 E-value: 1.92e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    564 TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKeTAPTTPKKLTPTTPEKLAPTTPEKPAPT 643
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-AAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                  ..
gi 1572721    644 TP 645
Cdd:PRK12270  118 TP 119

PHA03247

large tegument protein UL36; Provisional

545-772

1.92e-04

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.08 E-value: 1.92e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    545 APTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP---------TTPKEPAPTttkKPAPTAPKEPAPTTPKE 615
Cdd:PHA03247  254 APAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPP---DPPPPAPAGDAEEEDDE 330

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    616 TAPTTPKKLTPTTPEKLAPTTPEKPAPT-TP----EELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 690
Cdd:PHA03247  331 DGAMEVVSPLPRPRQHYPLGFPKRRRPTwTPpsslEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAAP 410

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    691 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTP 770
Cdd:PHA03247  411 VPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADL 490


                  ..
gi 1572721    771 KE 772
Cdd:PHA03247  491 AE 492

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

750-843

2.07e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.57 E-value: 2.07e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    750 APTTPKGTAPTTPKEPAPTTPKePAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkGPTSTTSDKPAPTTPKETAPT 829
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATP---------PPVPPRPVAPPVPHTPESAPK 430

                          90
                  ....*....|....*.
gi 1572721    830 TPKE--PAPTTPKKPA 843
Cdd:PRK14950  431 LTRAaiPVDEKPKYTP 446

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

576-711

2.10e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.86 E-value: 2.10e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    576 PAPTTPKEPAPTTPKEPAPtttkKPAPTAPKEPAPTTPKETAPTTPKkltpttpeklAPTTPEKPAPTTPEELAPTTPEE 655
Cdd:PRK14951  373 AAPAEKKTPARPEAAAPAA----APVAQAAAAPAPAAAPAAAASAPA----------APPAAAPPAPVAAPAAAAPAAAP 438

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    656 PTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKG 711
Cdd:PRK14951  439 AAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEG 494

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

677-842

2.10e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 45.69 E-value: 2.10e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    677 PKEPAPTTPKEPAPTTPKEP-APTTPKETAPTTPKGTA--------------PTTLKEPAPTTPKKPAPKEL-------- 733
Cdd:PLN03209  330 PKESDAADGPKPVPTKPVTPeAPSPPIEEEPPQPKAVVprplspytayedlkPPTSPIPTPPSSSPASSKSVdavakpae 409

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    734 --APTTTKEPTSTTSDKPAPTTPKGTAPTTP--KEPAPTTPKEPAPTTPKGTAPTTLKEPA-PTTPKKPAPKELAPTTTK 808
Cdd:PLN03209  410 pdVVPSPGSASNVPEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSSTSSvPAVPDTAPATAATDAAAP 489

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1572721    809 GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKP 842
Cdd:PLN03209  490 PPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAP 523

PRK08691

DNA polymerase III subunits gamma and tau; Validated

522-730

2.17e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 45.85 E-value: 2.17e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    522 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA----PTTPKKPAPTTPKEPAPTTPKEPAPTTT 597
Cdd:PRK08691  364 ASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASaaamPSEGKTAGPVSNQENNDVPPWEDAPDEA 443

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    598 KKPAPTAPKEPA-------PTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeEPAPTTPK 670
Cdd:PRK08691  444 QTAAGTAQTSAKsiqtaseAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPND---------------EAVETETF 508

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKE-TAPTTPKGTAPTTLKEPA----PTTPKKPAP 730
Cdd:PRK08691  509 AHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEhAAPADTAGGGADEEAEAGgiggNNTPSAPPP 573

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

476-874

2.26e-04

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 45.91 E-value: 2.26e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     476 PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPT-----TTKSAPTTPK 550
Cdd:pfam03154  180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSphpplQPMTQPPPPS 259

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     551 EPSPTTTKEPAPTTPKEPAPTtPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETapttpkkltpttpE 630
Cdd:pfam03154  260 QVSPQPLPQPSLHGQMPPMPH-SLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQR-------------I 325

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     631 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTT-- 708
Cdd:pfam03154  326 HTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSth 405

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     709 -PKGTAPTTLKEPAPTTPKKPAPKEL-APTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTL 786
Cdd:pfam03154  406 hPPSAHPPPLQLMPQSQQLPPPPAQPpVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTST 485

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     787 kepAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPkkpaptTPETPPPTTSEVSTPTTTKEP 866
Cdd:pfam03154  486 ---SSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPP------PPRSPSPEPTVVNTPSHASQS 556


                   ....*...
gi 1572721     867 TTIHKSPD 874
Cdd:pfam03154  557 ARFYKHLD 564

PRK10263

DNA translocase FtsK; Provisional

538-803

2.26e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.85 E-value: 2.26e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    538 APTTTKSAPTTPKEPSPTT-TKEPAPTTPK-----EPAPTTPK---KPAPTT-PKEPAPTTPKEPAPTTTKKPAPTAPKE 607
Cdd:PRK10263  328 TATQSWAAPVEPVTQTPPVaSVDVPPAQPTvawqpVPGPQTGEpviAPAPEGyPQQSQYAQPAVQYNEPLQQPVQPQQPY 407

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    608 PAPTTPKETAPTTPKKLTPTTPEKLAPTtpekPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 687
Cdd:PRK10263  408 YAPAAEQPAQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQP 483

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    688 PAPTTPKEPAPTTpKETAPTTPK----------------------GTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 745
Cdd:PRK10263  484 VEQQPVVEPEPVV-EETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVS 562

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1572721    746 SDKPA--PTTPKGTAPTTPKEPA--PTTPKEPAPTTPKGTAPttlKEPAPTTPKKPAPKELA 803
Cdd:PRK10263  563 PLASGvkKATLATGAAATVAAPVfsLANSGGPRPQVKEGIGP---QLPRPKRIRVPTRRELA 621

PRK14948

DNA polymerase III subunit gamma/tau;

373-552

2.29e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.72 E-value: 2.29e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPkEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT----- 447
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT-TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnleel 444

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    448 --------------------------------------------PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPA 483
Cdd:PRK14948  445 wqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAFAKVLGRSIKLNLESQSGSASNTAKTP 524

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721    484 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Cdd:PRK14948  525 PPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

491-596

2.34e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 45.23 E-value: 2.34e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   491 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPkEPSPTTTKEPAPTTPKEPAP 570
Cdd:COG3266  254 ALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAA-APAEAAAPQPTAAKPVVTET 332

                         90       100
                 ....*....|....*....|....*..
gi 1572721   571 TTPKKPAP-TTPKEPAPTTPKEPAPTT 596
Cdd:COG3266  333 AAPAAPAPeAAAAAAAPAAPAVAKKLA 359

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

765-858

2.56e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.65 E-value: 2.56e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    765 PAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAptttkgptsttsdKPAPTTPKETAPTTPKEPAPTTPKKPAP 844
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPA-------------AAAPAAPPKPAAAAAAAAAPAAPPAAAA 104

                          90
                  ....*....|....
gi 1572721    845 TTPETPPPTTSEVS 858
Cdd:PRK12270  105 AAAPAAAAVEDEVT 118

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

420-606

2.62e-04

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 45.51 E-value: 2.62e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   420 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPkepAPTAPKKPAPTTPKEPA 499
Cdd:COG3469   29 AASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAA---ATSTSATLVATSTASGA 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   500 PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 579
Cdd:COG3469  106 NTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTA 185

                        170       180
                 ....*....|....*....|....*....
gi 1572721   580 TPKEPAPTTPKEPA--PTTTKKPAPTAPK 606
Cdd:COG3469  186 TATTASGATTPSATttATTTGPPTPGLPK 214

PRK12323

DNA polymerase III subunit gamma/tau;

613-839

2.67e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.64 E-value: 2.67e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    613 PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 692
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    693 PKEPAPTTPKETAPTTPkgtapttlkePAPTTPKKPAPKELAPTTtkeptsttsdKPAPTTPKgtapttPKEPAPTTPKE 772
Cdd:PRK12323  455 AAAPAAAARPAAAGPRP----------VAAAAAAAPARAAPAAAP----------APADDDPP------PWEELPPEFAS 508

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721    773 PAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKEtAPTTPKEPAPTTP 839
Cdd:PRK12323  509 PAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVV-APRPPRASASGLP 574

PLN03237

DNA topoisomerase 2; Provisional

549-732

2.74e-04

DNA topoisomerase 2; Provisional

Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 45.62 E-value: 2.74e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    549 PKEPSPTTTKEPAPTTpkEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPA--PTAPKEPAPTTPKETAPTTPKKLTP 626
Cdd:PLN03237 1202 PKKPAPKKTTKKASES--ETTEETYGSSAMETENVAEVVKPKGRAGAKKKAPAaaKEKEEEDEILDLKDRLAAYNLDSAP 1279

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    627 TTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTT--------------PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 692
Cdd:PLN03237 1280 AQSAKMEETVKAVPARRAAARKKPLASVSVISDSddddddfavevslaERLKKKGGRKPAAANKKAAKPPAAAKKRGPAT 1359

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1572721    693 PKEPAPTTPKETAPTTPKGTAPTtlKEPAPTTpKKPAPKE 732
Cdd:PLN03237 1360 VQSGQKLLTEMLKPAEAIGISPE--KKVRKMR-ASPFNKK 1396

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

713-833

2.75e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.19 E-value: 2.75e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    713 APTTLKEPAPTTPKKPAPKelaptttkeptsttSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKgtapttlkePAPT 792
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPV--------------RPTPAPSTRPKAAAAANIPPKEPVRETATPPPVP---------PRPV 417

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1572721    793 TPKKPAPKELAPTTTKGPTsttsdkPAPTTPKETAPTTPKE 833
Cdd:PRK14950  418 APPVPHTPESAPKLTRAAI------PVDEKPKYTPPAPPKE 452

PHA03247

large tegument protein UL36; Provisional

396-613

2.78e-04

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.70 E-value: 2.78e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    396 PAPTTTKEPAPTTPKEPAPTTTKePAPTTTKSAPTTPKEPAP---------TTPKKPAPTTPKEPAPTTPKEPTPTTPKE 466
Cdd:PHA03247  255 PAPPPVVGEGADRAPETARGATG-PPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGA 333

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    467 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT------PKEPAPTTTKEpspTTPKEPAPTTTKSAPTTTKEPAPT 540
Cdd:PHA03247  334 MEVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSagrhhpKRASLPTRKRR---SARHAATPFARGPGGDDQTRPAAP 410

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    541 TTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA--PTTPKEPAPTTTKKPAPTAPKEPAPTTP 613
Cdd:PHA03247  411 VPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPapATEPAPDDPDDATRKALDALRERRPPEP 485

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

473-605

2.83e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.76 E-value: 2.83e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    473 EPAPTTPKEPAPTAPKKPAPTTPKEPAPT-TPKEPAPTTTKEPSPTTPKEPAptttksaPTTTKEPAPTTTKSAPTTPKE 551
Cdd:NF040712  208 EPADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEP-------VGPGAAPAAEPDEATRDAGEP 280

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1572721    552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAP 605
Cdd:NF040712  281 PAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

PRK12757

cell division protein FtsN; Provisional

548-617

2.96e-04

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 44.26 E-value: 2.96e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    548 TPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETA 617
Cdd:PRK12757  111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

482-583

2.98e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 45.23 E-value: 2.98e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   482 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKsapttPKEPSPTTTKEPA 561
Cdd:COG3266  265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAK-----PVVTETAAPAAPA 339

                         90       100
                 ....*....|....*....|...
gi 1572721   562 P-TTPKEPAPTTPKKPAPTTPKE 583
Cdd:COG3266  340 PeAAAAAAAPAAPAVAKKLAADE 362

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

481-637

3.06e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.76 E-value: 3.06e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    481 EPAPTAPKKPAPTTPKE---PAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPtttksAPTTPKEPSPTTT 557
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRA-----GVEQPEDEPVGPG 263

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    558 KEPAPttpkEPAPTTPKKPAPTTPKEPAPTTPKEPAPtttkkPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 637
Cdd:NF040712  264 AAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPA-----PAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

PRK14948

DNA polymerase III subunit gamma/tau;

388-560

3.11e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.34 E-value: 3.11e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    388 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP 467
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPP-----PAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    468 APT------TKEPAPTT-------------------------------------------------------PKEPAPTA 486
Cdd:PRK14948  441 LEElwqqilAKLELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721    487 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 560
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

PRK07994

DNA polymerase III subunits gamma and tau; Validated

688-893

3.27e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.24 E-value: 3.27e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    688 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAP 767
Cdd:PRK07994  366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAA 445

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    768 TTPKEPAPTTPKGTAPttlKEPAPTTPKKPAPKELAPTTtkgptsttsDKPAPTTPKETAPTTPKEPapttpkKPAPTTp 847
Cdd:PRK07994  446 ASRARPVNSALERLAS---VRPAPSALEKAPAKKEAYRW---------KATNPVEVKKEPVATPKAL------KKALEH- 506

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1572721    848 etpppttsevstptttkepttihkspdESTPELSAEPTPKALENSP 893
Cdd:PRK07994  507 ---------------------------EKTPELAAKLAAEAIERDP 525

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

415-523

3.34e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.19 E-value: 3.34e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    415 TTTKEPAPTTtksAPTTPKEPAPTTPkKPAPTTPkepapttpkeptpttpkepaPTTKEPAPTTPKEPAP-TAPKKPAPT 493
Cdd:PRK14950  359 LLVPVPAPQP---AKPTAAAPSPVRP-TPAPSTR--------------------PKAAAAANIPPKEPVReTATPPPVPP 414

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1572721    494 TPKEPAPTTPKEPAPTTTKE--PSPTTPKEPA 523
Cdd:PRK14950  415 RPVAPPVPHTPESAPKLTRAaiPVDEKPKYTP 446

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

544-690

3.38e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.09 E-value: 3.38e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    544 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPkePAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKK 623
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVA 446

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721    624 LTPTTPEKLAPTTPEKPAPTTPEelapttpeeptpttpeepAPTTPKAAAPNTPKEPAPTTPKEPAP 690
Cdd:PRK14951  447 LAPAPPAQAAPETVAIPVRVAPE------------------PAVASAAPAPAAAPAAARLTPTEEGD 495

PRK14948

DNA polymerase III subunit gamma/tau;

479-647

3.42e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 44.95 E-value: 3.42e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    479 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT- 557
Cdd:PRK14948  361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLn 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    558 ----------KEPAPTT-------------------------------------------------------PKEPAPTT 572
Cdd:PRK14948  441 leelwqqilaKLELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    573 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEE 647
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPE 595

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

510-617

3.70e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.84 E-value: 3.70e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   510 TTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTkEPAPTTPKEPAPtTPKKPAPTTPKEPAPTTP 589
Cdd:COG3266  263 SASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAA-AAAPAEAAAPQP-TAAKPVVTETAAPAAPAP 340

                         90       100
                 ....*....|....*....|....*...
gi 1572721   590 KEPAPTttkkPAPTAPKEPAPTTPKETA 617
Cdd:COG3266  341 EAAAAA----AAPAAPAVAKKLAADEQW 364

COG5373

Uncharacterized membrane protein [Function unknown];

544-612

3.78e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 44.99 E-value: 3.78e-04

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721   544 SAPTTPKEPSPtttkePAPTTPKEPAPTTPKKPAPTTPKEPaPTTPKEPAPTTTKKPAPTAPKEPAPTT 612
Cdd:COG5373   42 EAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

581-840

3.85e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.92 E-value: 3.85e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    581 PKEPAPTTPKEPAPTTTKKPAPTAPKEpAPTTPKETAPTTPKKLTPTTPEKLAPttpekpaPTTPeelapttpeepTPTT 660
Cdd:PLN03209  330 PKESDAADGPKPVPTKPVTPEAPSPPI-EEEPPQPKAVVPRPLSPYTAYEDLKP-------PTSP-----------IPTP 390

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    661 PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTP-KEPAPTTPKETAPTTPKgTAPTTLKEPAPTTPKKPAPKELAPTTTK 739
Cdd:PLN03209  391 PSSSPASSKSVDAVAKPAEPDVVPSPGSASNVPeVEPAQVEAKKTRPLSPY-ARYEDLKPPTSPSPTAPTGVSPSVSSTS 469

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    740 EPTSTTSDKPAPTTPKGTAPTTPK----EPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTS 815
Cdd:PLN03209  470 SVPAVPDTAPATAATDAAAPPPANmrplSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQ 549

                         250       260
                  ....*....|....*....|....*....
gi 1572721    816 DKPAPTTP----KETAPttPKEPAPTTPK 840
Cdd:PLN03209  550 PKPRPLSPytmyEDLKP--PTSPTPSPVL 576

TALPID3

pfam15324

Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ...

488-719

3.92e-04

Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.

Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 45.26 E-value: 3.92e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     488 KKPAPTTPKEPAPTTPKE---PAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 564
Cdd:pfam15324  964 QREPPVAASVPGDLPTKEtllPTPVPTPQPTPPCSPPSPLKEPSPVKTPDSSPCVSEHDFFPVKEIPPEKGADTGPAVSL 1043

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     565 PKEPAPTtpkkPAPTTPKEPAPtTPKEPAPTTTKKPAPtapkEPAPTTPKETAPttpkkltpttpeklAPTTPEKPAPTT 644
Cdd:pfam15324 1044 VITPTVT----PIATPPPAATP-TPPLSENSIDKLKSP----SPELPKPWEDSD--------------LPLEEENPNSEQ 1100

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721     645 PEelapttPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKepaPTTPKEPAPTTPKETAPTTPKGTAPTTLKE 719
Cdd:pfam15324 1101 EE------LHPRAVVMSVARDEEPESVVLPASPPEPKPLAPP---PLGAAPPSPPQSPSSSSSTLESSSSLTVTE 1166

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

639-734

4.04e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 4.04e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    639 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlk 718
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV--- 113

                          90
                  ....*....|....*.
gi 1572721    719 ePAPTTPKKPAPKELA 734
Cdd:PRK12270  114 -EDEVTPLRGAAAAVA 128

PRK08691

DNA polymerase III subunits gamma and tau; Validated

408-647

4.17e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 44.70 E-value: 4.17e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    408 TPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTtpkeptpttpkepapttkePAPTTPKEPAPTAP 487
Cdd:PRK08691  359 APLAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQT-------------------PVQTASAAAMPSEG 419

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    488 KKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP-SPTTTKEPAPTTP- 565
Cdd:PRK08691  420 KTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQTSAKSIQTASEAETPPENQVSKNKAADNETDAPlSEVPSENPIQATPn 499

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    566 KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEklaPTTPEKPAPTTP 645
Cdd:PRK08691  500 DEAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGG---NNTPSAPPPEFS 576


                  ..
gi 1572721    646 EE 647
Cdd:PRK08691  577 TE 578

DUF4045

pfam13254

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...

427-590

4.26e-04

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.

Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 44.39 E-value: 4.26e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     427 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 506
Cdd:pfam13254  195 GRPNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPPPKTKELPKDSEEP 274

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     507 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPttpkEPAPTTPKKP--APTTPKEP 584
Cdd:pfam13254  275 AAPSKSAEASTEKKEPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSP----KPKPQSPPKDfrANLRSREV 350


                   ....*.
gi 1572721     585 APTTPK 590
Cdd:pfam13254  351 PKDKSK 356

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

402-522

4.29e-04

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 41.96 E-value: 4.29e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     402 KEPAPTTPKEPAPTTTKEPAPTTTKSaPTTPKEPAPTTPKKPAPTTPKepapttpKEPTPTTPKEPAPTTKEPAPTTPKE 481
Cdd:pfam02389    6 KQPCQPPPQEPCVPTTKEPCHSKVPE-PCNPKVPEPCCPKVPEPCCPK-------VPEPCCPKVPEPCCPKVPEPCYPKV 77

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1572721     482 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 522
Cdd:pfam02389   78 PEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVP 118

PRK10263

DNA translocase FtsK; Provisional

375-837

4.40e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.08 E-value: 4.40e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    375 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE-----PAPTTPKKPAPTTPK 449
Cdd:PRK10263  371 PVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQqpyyaPAPEQPVAGNAWQAE 450

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    450 EPAPTTPKEPTPTTPKEPApttkEPAPTTPKEPAPTAPKKPAPTTP----KEPAPTTPK--------------------- 504
Cdd:PRK10263  451 EQQSTFAPQSTYQTEQTYQ----QPAAQEPLYQQPQPVEQQPVVEPepvvEETKPARPPlyyfeeveekrarereqlaaw 526

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    505 -EPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP---------TTTKSAPTTPKEP--SPTTTKEPAPTT-----PKE 567
Cdd:PRK10263  527 yQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSplasgvkkaTLATGAAATVAAPvfSLANSGGPRPQVkegigPQL 606

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    568 PAPTTPKKPaptTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEE 647
Cdd:PRK10263  607 PRPKRIRVP---TRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHD 683

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    648 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTP-----------KEPAPTTPKEP--APTTPKETAPTTPKGTAP 714
Cdd:PRK10263  684 VPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPfslddfefspmKALLDDGPHEPlfTPIVEPVQQPQQPVAPQQ 763

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    715 TTLKEPAPTTPKKP--APKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPkEPAPTTPKEPAPTTPKGTAPttlKEPAPT 792
Cdd:PRK10263  764 QYQQPQQPVAPQPQyqQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAP-QPQYQQPQQPVAPQPQYQQP---QQPVAP 839

                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*
gi 1572721    793 TPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPT 837
Cdd:PRK10263  840 QPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDT 884

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

474-567

4.62e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.42 E-value: 4.62e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKePAPTAPKKPAPTTPKEPAPTTPkEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKE-- 551
Cdd:PRK14950  376 PSPVRPT-PAPSTRPKAAAAANIPPKEPVR-ETATPPPVPPRPVAP-----------------PVPHTPESAPKLTRAai 436

                          90
                  ....*....|....*.
gi 1572721    552 PSPTTTKEPAPTTPKE 567
Cdd:PRK14950  437 PVDEKPKYTPPAPPKE 452

PHA03369

capsid maturational protease; Provisional

380-700

4.62e-04

capsid maturational protease; Provisional

Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 44.60 E-value: 4.62e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    380 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPtttkEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEp 459
Cdd:PHA03369  346 EILKTASLTAPSRVLAAAAKVAVIAAPQTHTGPAD----RQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYN- 420

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    460 tpttpkepapttkepaPTTPKEPAPtapkkPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 539
Cdd:PHA03369  421 ----------------PQSPGTSYG-----PEPVGPVPPQPTNPYVMPISMANMVYPGHPQEHGHERKRKRGGELKEELI 479

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    540 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTtpkePAPTTTKKPAPTAPKEPAPTTPKETAPT 619
Cdd:PHA03369  480 ETLKLVKKLKEEQESLAKELEATAHKSEIKKIAESEFKNAGAKTAAAN----IEPNCSADAAAPATKRARPETKTELEAV 555

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    620 TPKKLTPTTPEKLAPTTPEKPA---------PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTtpkePAP 690
Cdd:PHA03369  556 VRFPYQIRNMESPAFVHSFTSTtlaaaagqgSDTAEALAGAIETLLTQASAQPAGLSLPAPAVPVNASTPAST----PPP 631

                         330
                  ....*....|
gi 1572721    691 TTPKEPAPTT 700
Cdd:PHA03369  632 LAPQEPPQPG 641

PRK12323

DNA polymerase III subunit gamma/tau;

306-503

4.92e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 4.92e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    306 SAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTT 385
Cdd:PRK12323  379 AAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAP 458

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    386 TKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkePAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 465
Cdd:PRK12323  459 AAAARPAAAGPRPVAAAAAAAPARAAPAAAPA--PADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDD 536

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1572721    466 EPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 503
Cdd:PRK12323  537 AFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574

PRK12323

DNA polymerase III subunit gamma/tau;

749-910

4.92e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 4.92e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    749 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTtPKKPAPKELAPTTTKGPTSTTSDK-PAPTTPKETA 827
Cdd:PRK12323  381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPA-RRSPAPEALAAARQASARGPGGAPaPAPAPAAAPA 459

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    828 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEpttihksPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 907
Cdd:PRK12323  460 AAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPP-------PWEELPPEFASPAPAQPDAAPAGWVAESIPDPATA 532


                  ...
gi 1572721    908 KPE 910
Cdd:PRK12323  533 DPD 535

PHA03247

large tegument protein UL36; Provisional

420-648

5.37e-04

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 5.37e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    420 PAPTTTKSAPTTPKEPAPTTPKKPAPttpkEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA 499
Cdd:PHA03247  257 PPPVVGEGADRAPETARGATGPPPPP----EAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDG 332

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    500 PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTtpkepsPTTTKEPAPTTpKEPAPTTPKKPAPT 579
Cdd:PHA03247  333 AMEVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASL------PTRKRRSARHA-ATPFARGPGGDDQT 405

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721    580 TPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEEL 648
Cdd:PHA03247  406 RPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKAL 474

PRK14971

DNA polymerase III subunit gamma/tau;

542-644

5.43e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.38 E-value: 5.43e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    542 TKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTP 621
Cdd:PRK14971  368 DASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAV 447

                          90       100
                  ....*....|....*....|...
gi 1572721    622 KKLTPTTPEKLAPTTPEKPAPTT 644
Cdd:PRK14971  448 RPAQFKEEKKIPVSKVSSLGPST 470

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

630-911

5.59e-04

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 44.68 E-value: 5.59e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    630 EKLAPTTPEKP-----APTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTP----KEPAPTTPKEPAPTT 700
Cdd:PTZ00449  494 KKLAPIEEEDSdkhdePPEGPEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEgevgKKPGPAKEHKPSKIP 573

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    701 PKETAPTTPKgtAPTTLKEP-APTTPKKPAPKELAPTTTKEPTSTTSDKPApTTPKGTAPTTPKEP-APTTPKEPA-PTT 777
Cdd:PTZ00449  574 TLSKKPEFPK--DPKHPKDPeEPKKPKRPRSAQRPTRPKSPKLPELLDIPK-SPKRPESPKSPKRPpPPQRPSSPErPEG 650

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    778 PKgtAPTTLKEP-APTTPKKPAPKE--------LAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPA----------PTT 838
Cdd:PTZ00449  651 PK--IIKSPKPPkSPKPPFDPKFKEkfyddyldAAAKSKETKTTVVLDESFESILKETLPETPGTPFttprplppklPRD 728

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    839 PKKPAPTTPETPPPTTSEVSTPTTTKEPTT-IHKSPDES-----TPELSAEPTPKALENSPKE----PGVPT--TKTPAA 906
Cdd:PTZ00449  729 EEFPFEPIGDPDAEQPDDIEFFTPPEEERTfFHETPADTplpdiLAEEFKEEDIHAETGEPDEamkrPDSPSehEDKPPG 808


                  ....*
gi 1572721    907 TKPEM 911
Cdd:PTZ00449  809 DHPSL 813

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

359-432

5.91e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 5.91e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721    359 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP 432
Cdd:PRK12270   46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119

rne

PRK10811

ribonuclease E; Reviewed

671-839

6.05e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 44.65 E-value: 6.05e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPkgTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:PRK10811  851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVE--AVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQP 928

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    751 PTTPKGTAPTtpkepAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTtsdkPAPTTPKETAPTT 830
Cdd:PRK10811  929 QVITESDVAV-----AQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAE----VAAEVETVTAVEP 999


                  ....*....
gi 1572721    831 PKEPAPTTP 839
Cdd:PRK10811 1000 EVAPAQVPE 1008

FimV

COG3170

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

559-792

6.11e-04

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 44.01 E-value: 6.11e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   559 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPK---EPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPT 635
Cdd:COG3170  105 DPPAYAAAAAAPAAAPAPAPAAPAAAAAAADQpaaEAAPAASGEYYPVRPGDTLWSIAARPVRPSSGVSLDQMMVALYRA 184

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   636 TPE----------KPAPT----TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 701
Cdd:COG3170  185 NPDafidgninrlKAGAVlrvpAAEEVAALSPAEARQEVQAQSADWAAYRARLAAAVEPAPAAAAPAAPPAAAAAAGPVP 264

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   702 KETAPTTPKGTAPTTLKEPAPTTPKKPAP-----KELAPTTTKEPTSTTSDKPAPTTPkGTAPTTPKEPAPTTPKEPAPT 776
Cdd:COG3170  265 AAAEDTLSPEVTAAAAAEEADALPEAAAElaerlAALEAQLAELQRLLALKNPAPAAA-VSAPAAAAAAATVEAAAPAAA 343

                        250
                 ....*....|....*.
gi 1572721   777 TPKGTAPTTLKEPAPT 792
Cdd:COG3170  344 AQPAAAAPAPALDNPL 359

PRK10819

transport protein TonB; Provisional

474-600

6.39e-04

transport protein TonB; Provisional

Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 43.13 E-value: 6.39e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK-EP 552
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKrEV 121

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1572721    553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKePAPTTPKEPAPTTTKKP 600
Cdd:PRK10819  122 KPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRALSRNQP 168

rne

PRK10811

ribonuclease E; Reviewed

671-843

6.48e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 44.26 E-value: 6.48e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    671 AAAPNTPKEPAPTTpkEPAPTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPtttkeptsttsdkp 749
Cdd:PRK10811  875 VAAAVEPVVSAPVV--EAVAEVVEEPVVVAePQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAV-------------- 938

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    750 APTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKE--TA 827
Cdd:PRK10811  939 AQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNhaTA 1018

                         170
                  ....*....|....*.
gi 1572721    828 PTTpKEPAPTTPKKPA 843
Cdd:PRK10811 1019 PMT-RAPAPEYVPEAP 1033

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

540-878

6.53e-04

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.99 E-value: 6.53e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    540 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAptTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPT 619
Cdd:NF033839  155 SSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKE--KAKLAVATYMSKILDDIQKHHLQKEKHRQIVA 232

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    620 TPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 699
Cdd:NF033839  233 LIKELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKP 312

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    700 TPKETAP-TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPApTTPKGTAPTTPKEPAPTTPKEPAPTTP 778
Cdd:NF033839  313 EPETPKPeVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPE-VKPQPEKPKPEVKPQPETPKPEVKPQP 391

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    779 KGTAPTTLKEPAPTTPK-KPAPKELAPTTTKGPTSTTSD-KPAPTTPK---ETAPTTPKEPAPTTPKKPAPTTPETPPPT 853
Cdd:NF033839  392 EKPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKpevKPQPEKPKPEVKPQPETPKPEVKPQPEKP 471

                         330       340
                  ....*....|....*....|....*
gi 1572721    854 TSEVSTPTTTKEPTTIHKSPDESTP 878
Cdd:NF033839  472 KPEVKPQPEKPKPDNSKPQADDKKP 496

motB

PRK12799

flagellar motor protein MotB; Reviewed

477-596

6.77e-04

flagellar motor protein MotB; Reviewed

Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 43.94 E-value: 6.77e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    477 TTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTT 556
Cdd:PRK12799  295 THGTVPVAAVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVNM 374

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1572721    557 TKEPAPTTPKEPAPT---TPKKPAPTTPKEPAPTTPKEPAPTT 596
Cdd:PRK12799  375 QPQPMSTTETQQSSTgniTSTANGPTTSLPAAPASNIPVSPTS 417

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

476-641

6.87e-04

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 41.19 E-value: 6.87e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     476 PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAptttksaptttkepaptttksaPTTPKEPSPT 555
Cdd:pfam02389    8 PCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPE----------------------PCCPKVPEPC 65

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     556 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPttpketapttpkkltpttpekLAPT 635
Cdd:pfam02389   66 CPKVPEPCYPKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP---------------------CPST 124


                   ....*.
gi 1572721     636 TPEKPA 641
Cdd:pfam02389  125 VTPGPA 130

PRK10905

cell division protein DamX; Validated

477-601

7.37e-04

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 43.39 E-value: 7.37e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    477 TTPKEPAPTAPKKPAPTTPKepAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKsaptttkepAPTTTKSAPTTPKEPSPTT 556
Cdd:PRK10905  122 TLPTEPATVAPVRNGNASRQ--TAKTQTAERPATTRPARKQAVIEPKKPQAT---------AKTEPKPVAQTPKRTEPAA 190

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1572721    557 TKEPAPTtpkePAPTTPKKPAPTTPKEPAPTTpkEPAPTTTKKPA 601
Cdd:PRK10905  191 PVASTKA----PAATSTPAPKETATTAPVQTA--SPAQTTATPAA 229

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

377-519

7.52e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 7.52e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    377 TPKEPAPTTTKSAPTTPkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT--PKEPAPTTPKKPAPTTPKEPAPT 454
Cdd:NF040712  191 DFGRPLRPLATVPRLAR-EPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    455 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 519
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

PRK12323

DNA polymerase III subunit gamma/tau;

696-922

7.65e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.10 E-value: 7.65e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    696 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkeptsttsdKPAPTTPKGTAPTTPKEPAPTTPKEPAP 775
Cdd:PRK12323  374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAA-----------------APAAAAAARAVAAAPARRSPAPEALAAA 436

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    776 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTttkgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTS 855
Cdd:PRK12323  437 RQASARGPGGAPAPAPAPAAAPAAAARPAA------------AGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPP 504

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    856 EVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEP-GVPTTKTPAATKPEMTTTAKDKTTER 922
Cdd:PRK12323  505 EFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPaAAPAPRAAAATEPVVAPRPPRASASG 572

COG5373

Uncharacterized membrane protein [Function unknown];

373-441

7.70e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 44.22 E-value: 7.70e-04

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721   373 SAPTTPKEPAPtttkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkEPAPTTTKSAPTTPKEPAPTTPK 441
Cdd:COG5373   42 EAASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAPPAAAE-APAPAAAAPPAEAEPAAAPAAAS 105

FimV

COG3170

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

474-717

7.76e-04

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 43.63 E-value: 7.76e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPS 553
Cdd:COG3170  114 AAPAAAPAPAPAAPAAAAAAADQPAAEAAPAASGEYYPVRPGDTLWSIAARPVRPSSGVSLDQMMVALYRANPDAFIDGN 193

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   554 PTTTKEPAPT---TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPE 630
Cdd:COG3170  194 INRLKAGAVLrvpAAEEVAALSPAEARQEVQAQSADWAAYRARLAAAVEPAPAAAAPAAPPAAAAAAGPVPAAAEDTLSP 273

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   631 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPN-TPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTP 709
Cdd:COG3170  274 EVTAAAAAEEADALPEAAAELAERLAALEAQLAELQRLLALKNPApAAAVSAPAAAAAAATVEAAAPAAAAQPAAAAPAP 353


                 ....*...
gi 1572721   710 KGTAPTTL 717
Cdd:COG3170  354 ALDNPLLL 361

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

426-523

8.21e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 8.21e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    426 KSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 505
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPA-------------------------AAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAA 91

                          90
                  ....*....|....*...
gi 1572721    506 PAPTTTKEPSPTTPKEPA 523
Cdd:PRK12270   92 AAAAPAAPPAAAAAAAPA 109

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

547-616

9.00e-04

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 43.52 E-value: 9.00e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572721    547 TTPKEPS-PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKET 616
Cdd:PTZ00144  120 TGGAPPAaAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

428-559

9.22e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.64 E-value: 9.22e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    428 APTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkePAPTTPKEPAPTAPkkpAPTTPKEPAPTTPKEPA 507
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT------------------------PAPSTRPKAAAAAN---IPPKEPVRETATPPPVP 413

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1572721    508 PTTTKEPSPTTPKEPaptttksaptttkEPAPTTTKSAPTTPKEPSPTTTKE 559
Cdd:PRK14950  414 PRPVAPPVPHTPESA-------------PKLTRAAIPVDEKPKYTPPAPPKE 452

rne

PRK10811

ribonuclease E; Reviewed

517-729

9.32e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 43.87 E-value: 9.32e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    517 TTPKEPAPTTTKSAPTTTKEPA-PTTTKSAPTTPKEPSPTTtkEPAPTTPKEPAPTTPkkPAPTTPKEPAPTTPKEPAPT 595
Cdd:PRK10811  848 VRPQDVQVEEQREAEEVQVQPVvAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAE--PQPEEVVVVETTHPEVIAAP 923

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    596 TTKKPAPTAPKEpAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElapttpeepTPTtpeepapttpKAAAPN 675
Cdd:PRK10811  924 VTEQPQVITESD-VAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPE---------VVA----------QPAAPV 983

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    676 TPKEPAPTtpkepAPTTPKEPAPTTPKETAPTTPKG--TAPTTlKEPAPTTPKKPA 729
Cdd:PRK10811  984 VAEVAAEV-----ETVTAVEPEVAPAQVPEATVEHNhaTAPMT-RAPAPEYVPEAP 1033

PRK14948

DNA polymerase III subunit gamma/tau;

371-443

9.34e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 43.80 E-value: 9.34e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1572721    371 IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP 443
Cdd:PRK14948  522 KTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

567-731

9.44e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.22 E-value: 9.44e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    567 EPAPTTPKKPAPTTPKE---PAPTTPKEPAPTTTKKPAPTAPKEPAPT-TPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 642
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    643 TTPEElapttpeeptpttpeepaptTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPttpketaPTTPKGTAPTTLKEPAP 722
Cdd:NF040712  269 EPDEA--------------------TRDAGEPPAPGAAETPEAAEPPAPAPAAPAA-------PAAPEAEEPARPEPPPA 321


                  ....*....
gi 1572721    723 TTPKKPAPK 731
Cdd:NF040712  322 PKPKRRRRR 330

PRK07764

DNA polymerase III subunits gamma and tau; Validated

671-785

9.69e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.82 E-value: 9.69e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    671 AAAPNTPKEPAPTTPKEPAPT---TPKEPAPTTPKETAPTTPKGTAPTTlkEPAPTTPKKPAPKELAPTTTKEPTSTTSD 747
Cdd:PRK07764  387 VAGGAGAPAAAAPSAAAAAPAaapAPAAAAPAAAAAPAPAAAPQPAPAP--APAPAPPSPAGNAPAGGAPSPPPAAAPSA 464

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1572721    748 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 785
Cdd:PRK07764  465 QPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

378-508

1.08e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 40.81 E-value: 1.08e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     378 PKEPAPTTTKSaPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSA-PTTPKEPAPTTPKKPAPTTPkepapttp 456
Cdd:pfam02389   13 PQEPCVPTTKE-PCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPePCCPKVPEPCYPKVPEPCSP-------- 83

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1572721     457 keptpttpkepapttKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 508
Cdd:pfam02389   84 ---------------KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

383-519

1.17e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.83 E-value: 1.17e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    383 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPT 462
Cdd:NF040712  190 PDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721    463 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTtpkEPAPTTPKEPAPTTTKEPSPTTP 519
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPA---APAAPAAPEAEEPARPEPPPAPK 323

PHA03378

EBNA-3B; Provisional

383-611

1.18e-03

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 43.52 E-value: 1.18e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    383 PTTTKSAPTTPKEPAPTTTKEPA----PTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPKEPAPTTPKE 458
Cdd:PHA03378  676 PSPTGANTMLPIQWAPGTMQPPPraptPMRPPAAPPGRAQRPAAATGRARP-----PAAAPGRARPPAAAPGRARPPAAA 750

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    459 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 538
Cdd:PHA03378  751 PGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLT 830

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1572721    539 PTTTKSAPTTpKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPT 611
Cdd:PHA03378  831 GGVKRGRPSL-KKPAALERQAAAGPTPSPGSGTSDKIVQAPVFYPPVLQPIQVMRQLGSVRAAAASTVTQAPT 902

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

493-842

1.18e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.02 E-value: 1.18e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     493 TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 572
Cdd:pfam17823   46 AVPRADNKSSEQ*NFCAATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSS 125

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     573 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeelAPTT 652
Cdd:pfam17823  126 AAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTA---ASSA 202

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     653 PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 732
Cdd:pfam17823  203 PATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSP 282

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     733 LAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPT---------TPKGTAPTTLKEPAPTTPKKPAPKELA 803
Cdd:pfam17823  283 AKHMPSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSpsnttlepnTPKSVASTNLAVVTTTKAQAKEPSASP 362

                          330       340       350
                   ....*....|....*....|....*....|....*....
gi 1572721     804 PTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKP 842
Cdd:pfam17823  363 VPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILLAP 401

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

561-679

1.20e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.26 E-value: 1.20e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    561 APTTPKEPAPTTPKKPAPTTPKePAPTTPKEPAPTTTKKPAP--TAPKEPAPTTPKETAPTTpkkltpttpeklaPTTPE 638
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEpvRETATPPPVPPRPVAPPV-------------PHTPE 426

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1572721    639 KPAPTTPEELAPTTPEeptpttpeepapttpKAAAPNTPKE 679
Cdd:PRK14950  427 SAPKLTRAAIPVDEKP---------------KYTPPAPPKE 452

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

372-500

1.23e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 1.23e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    372 KSAPTTPKE----PAPTTTKSAPTTPKEPAPTTTkePAPTTPKEPAPtttkepaptttkSAPTTPKEPAPTTPKKPAPTT 447
Cdd:PRK14951  378 KKTPARPEAaapaAAPVAQAAAAPAPAAAPAAAA--SAPAAPPAAAP------------PAPVAAPAAAAPAAAPAAAPA 443

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1572721    448 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPkKPAPTTPKEPAP 500
Cdd:PRK14951  444 AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP-AAARLTPTEEGD 495

PHA03378

EBNA-3B; Provisional

374-598

1.26e-03

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 43.52 E-value: 1.26e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    374 APTTPKEPAPTTTKSAPTTPKE-PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTksaPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:PHA03378  650 TPHQPPQVEITPYKPTWTQIGHiPYQPSPTGANTMLPIQWAPGTMQPPPRAPT---PMRPPAAPPGRAQRPAAATGRARP 726

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    453 PTTPKEPTPTTPKEpapttkePAPTTPKEPAPTAPKKPAPT-TPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAP 531
Cdd:PHA03378  727 PAAAPGRARPPAAA-------PGRARPPAAAPGRARPPAAApGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPP 799

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721    532 TTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTpKKPAPTTPKEPAPTTPKEPAPTTTK 598
Cdd:PHA03378  800 PQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSL-KKPAALERQAAAGPTPSPGSGTSDK 865

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

475-542

1.34e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.96 E-value: 1.34e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721     475 APTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT 542
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPP--ASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAA 147

PRK07994

DNA polymerase III subunits gamma and tau; Validated

748-923

1.34e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 1.34e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    748 KPAPTTPKGTAPTTPKEPAPTtpkEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETA 827
Cdd:PRK07994  360 HPAAPLPEPEVPPQSAAPAAS---AQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGAT 436

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    828 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHkSPDESTPELSAEP---TPKALENSPKEPgvpttKTp 904
Cdd:PRK07994  437 KAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAY-RWKATNPVEVKKEpvaTPKALKKALEHE-----KT- 509

                         170
                  ....*....|....*....
gi 1572721    905 aatkPEMTTTAKDKTTERD 923
Cdd:PRK07994  510 ----PELAAKLAAEAIERD 524

PRK14971

DNA polymerase III subunit gamma/tau;

671-779

1.35e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 43.23 E-value: 1.35e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTlkEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:PRK14971  387 AAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPP--AAVPVNPPSTAPQAVRPAQFKEEKKIPVSKVS 464

                          90       100
                  ....*....|....*....|....*....
gi 1572721    751 PTTPKGTAPTTPKEPAPTTPKEPAPTTPK 779
Cdd:PRK14971  465 SLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

674-799

1.41e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 40.42 E-value: 1.41e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     674 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkeptsTTSDKPAPTT 753
Cdd:pfam02389    8 PCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEP-------------CCPKVPEPCY 74

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 1572721     754 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAP 799
Cdd:pfam02389   75 PKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120

PRK07994

DNA polymerase III subunits gamma and tau; Validated

575-767

1.41e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.41e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    575 KPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPkkltpttpeklAPTTPEKPAPTTPEELApttpe 654
Cdd:PRK07994  360 HPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASA-----------PQQAPAVPLPETTSQLL----- 423

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    655 eptpttpeepapttpkAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP-----KETAPTTPKGTAPTTLKEPAPTTPKKPA 729
Cdd:PRK07994  424 ----------------AARQQLQRAQGATKAKKSEPAAASRARPVNSalerlASVRPAPSALEKAPAKKEAYRWKATNPV 487

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1572721    730 PKElaptttkeptsttsdKPAPTTPKGTAPTTPKEPAP 767
Cdd:PRK07994  488 EVK---------------KEPVATPKALKKALEHEKTP 510

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

639-780

1.49e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 1.49e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    639 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPT-TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTL 717
Cdd:PRK14951  365 KPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1572721    718 KEPAPTTPKKPAPKELAPtttkeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKG 780
Cdd:PRK14951  445 VALAPAPPAQAAPETVAI-------------PVRVAPEPAVASAAPAPAAAPAAARLTPTEEG 494

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

311-450

1.65e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.53 E-value: 1.65e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   311 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPAlTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP 390
Cdd:COG3266  236 AAEVLTARLVLLLLIIGSALKAPSQASSASAPA-TTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAP 314

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   391 TTPKEPAPTTTKepapttPKEPAPTTTKEPAPTTTKSApttpkePAPTTPKKPAPTTPKE 450
Cdd:COG3266  315 AEAAAPQPTAAK------PVVTETAAPAAPAPEAAAAA------AAPAAPAVAKKLAADE 362

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

552-617

1.67e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 43.01 E-value: 1.67e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721    552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKP---APTAPKEPAPTTPKETA 617
Cdd:PRK14954  382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSPASAPTPeqqPPVARSAPLPPSPQASA 450

PRK11633

cell division protein DedD; Provisional

536-611

1.75e-03

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 41.53 E-value: 1.75e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    536 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPA--PTAPKEPAPT 611
Cdd:PRK11633   69 EGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEpkPVVEEKAAPT 146

COG5373

Uncharacterized membrane protein [Function unknown];

558-616

1.78e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.68 E-value: 1.78e-03

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1572721   558 KEPAPTTPKEPAPTTPKKP---APTTPKEPAPTTPKEPAPTTTkKPAPTAPKEPAPTTPKET 616
Cdd:COG5373   40 AAEAASAPAEPEPEAAAAAtaaAPEAAPAPVPEAPAAPPAAAE-APAPAAAAPPAEAEPAAA 100

PHA03247

large tegument protein UL36; Provisional

475-724

1.98e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 1.98e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    475 APTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSP 554
Cdd:PHA03247  254 APAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGA 333

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    555 TTTKEPAPTTPKEPAPTTPKKPAPT-TPkepaPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLA 633
Cdd:PHA03247  334 MEVVSPLPRPRQHYPLGFPKRRRPTwTP----PSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAA 409

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    634 PTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTA 713
Cdd:PHA03247  410 PVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGAD 489

                         250
                  ....*....|.
gi 1572721    714 PTTLKEPAPTT 724
Cdd:PHA03247  490 LAELLGRHPDT 500

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

403-549

2.00e-03

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.27 E-value: 2.00e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    403 EPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAP----TTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Cdd:PRK13108  294 EALEREPAELAAAAVASAASAVGPVGPGEPNQPDDVAEAVKAEvaevTDEVAAESVVQVADRDGESTPAVEETSEADIER 373

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572721    479 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP 549
Cdd:PRK13108  374 EQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEP 444

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

473-617

2.00e-03

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.27 E-value: 2.00e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    473 EPAPTTPKEPAPTA----PKKPAPTTPKEPA-PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPtttkEPAPTTTKSAPT 547
Cdd:PRK13108  294 EALEREPAELAAAAvasaASAVGPVGPGEPNqPDDVAEAVKAEVAEVTDEVAAESVVQVADRDG----ESTPAVEETSEA 369

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    548 TPKEPSPTTTKEPAPTTPKE------PAPTTPKKPAPTTPKEPAPTTPKEPAPtttkKPAPTAPKEPAPTTPKETA 617
Cdd:PRK13108  370 DIEREQPGDLAGQAPAAHQVdaeaasAAPEEPAALASEAHDETEPEVPEKAAP----IPDPAKPDELAVAGPGDDP 441

rne

PRK10811

ribonuclease E; Reviewed

359-514

2.01e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.72 E-value: 2.01e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    359 ASTTPKEPTPTTIKSAPTTPKEPAPTTtksapttpkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT---TPKEP 435
Cdd:PRK10811  876 AAAVEPVVSAPVVEAVAEVVEEPVVVA---------EPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAVaqeVAEHA 946

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    436 APTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEP--------APTTpKEPA 507
Cdd:PRK10811  947 EPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEAtvehnhatAPMT-RAPA 1025


                  ....*..
gi 1572721    508 PTTTKEP 514
Cdd:PRK10811 1026 PEYVPEA 1032

PRK12373

NADH-quinone oxidoreductase subunit E;

516-648

2.13e-03

NADH-quinone oxidoreductase subunit E;

Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 42.10 E-value: 2.13e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    516 PTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPkKPAPTTPKEPAPTTPKEPAPT 595
Cdd:PRK12373  194 LTSLTEEAGKARYNASKALAEDIGDTVKRIDGTEVPLLAPWQGDAAPVPPSEAARPKS-ADAETNAALKTPATAPKAAAK 272

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1572721    596 TTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEEL 648
Cdd:PRK12373  273 NAKAPEAQPVSGTAAAEPAPKEAAKAAAAAAKPALEDKPRPLGIARPGGADDL 325

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

423-785

2.18e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 2.18e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    423 TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT 502
Cdd:NF033839  155 SSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALI 234

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    503 PKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPapTTPK---EPAPTTPKKPAPT 579
Cdd:NF033839  235 KELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKP--SAPKpgmQPSPQPEKKEVKP 312

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    580 TPKEPAP-TTPKEPAPTTTKKPAPTAPK---EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE-KPAPTTPE-ELAPTTP 653
Cdd:NF033839  313 EPETPKPeVKPQLEKPKPEVKPQPEKPKpevKPQLETPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPETPKpEVKPQPE 392

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    654 EEPTPTTPEEPAPTTPKAAAPNTPK---EPAPTTPKE---PAPTTPK---EPAPTTPKETAPTTPKGTAPTTlkEPAPTT 724
Cdd:NF033839  393 KPKPEVKPQPEKPKPEVKPQPEKPKpevKPQPEKPKPevkPQPEKPKpevKPQPEKPKPEVKPQPETPKPEV--KPQPEK 470

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572721    725 PKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTpkEPAPTTPKGTAPTT 785
Cdd:NF033839  471 PKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTN--EKATNKPKKSLPST 529

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

326-572

2.22e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 2.22e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    326 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP-APTTTKEP 404
Cdd:NF033839  277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLeTPKPEVKP 356

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    405 APTTPKEPAPTTTKEPAPTTtKSAPTTPK---EPAPTTPK---KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Cdd:NF033839  357 QPEKPKPEVKPQPEKPKPEV-KPQPETPKpevKPQPEKPKpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 435

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    479 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Cdd:NF033839  436 EKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTN 515

                         250
                  ....*....|....
gi 1572721    559 EPAPTTPKEPAPTT 572
Cdd:NF033839  516 EKATNKPKKSLPST 529

PHA03247

large tegument protein UL36; Provisional

377-588

2.30e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 2.30e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    377 TPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTTKEPAPTTTKSAPTT-------------PKEPA 436
Cdd:PHA03247  268 APETARGATGPPPPPEAAAPNGAAAPPDgvwgaalAGAPLALPAPPDPPPPAPAGDAEEEDDedgamevvsplprPRQHY 347

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    437 PTT-PKKPAPT-TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTpKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEP 514
Cdd:PHA03247  348 PLGfPKRRRPTwTPPSSLEDLSAGRHHPKRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPAS 426

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721    515 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 588
Cdd:PHA03247  427 APPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLGRHPDT 500

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

552-617

2.32e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.98 E-value: 2.32e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    552 PSPTTTKEPAPTTPKEPaPTTPKKPAPTTPKEPAPTTPKePAPTTTKKPAPTAPKEPAPTTPKETA 617
Cdd:PTZ00144  122 GAPPAAAPAAAAAAKAE-KTTPEKPKAAAPTPEPPAASK-PTPPAAAKPPEPAPAAKPPPTPVARA 185

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

382-448

2.81e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 42.24 E-value: 2.81e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    382 APTTTKSAPT---TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtttkSAPTTPKEPAPTTPKKPAPTTP 448
Cdd:PRK14954  381 APSPAGSPDVkkkAPEPDLPQPDRHPGPAKPEAPGARPAELPSP----ASAPTPEQQPPVARSAPLPPSP 446

PHA03379

EBNA-3A; Provisional

495-725

2.87e-03

EBNA-3A; Provisional

Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 42.35 E-value: 2.87e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    495 PKEPAPTTPKEPAPtttkEPSPTTPKEpaptttksaptttkepAPTTTKSAPTTPKEPSPTTTKEPAPTTPK---EPAPT 571
Cdd:PHA03379  408 ASEPTYGTPRPPVE----KPRPEVPQS----------------LETATSHGSAQVPEPPPVHDLEPGPLHDQhsmAPCPV 467

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    572 TPKKPAPTTPKEPA---PTTPKEPAPTTTKKPAPTA----PKEPAPTTPKETAPTTPKKLTpttpeklAPTTPEkPAPTT 644
Cdd:PHA03379  468 AQLPPGPLQDLEPGdqlPGVVQDGRPACAPVPAPAGpivrPWEASLSQVPGVAFAPVMPQP-------MPVEPV-PVPTV 539

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    645 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE-PAPTTPKETAPTTPKGTAPTTLKEPAPT 723
Cdd:PHA03379  540 ALERPVCPAPPLIAMQGPGETSGIVRVRERWRPAPWTPNPPRSPSQMSVRDrLARLRAEAQPYQASVEVQPPQLTQVSPQ 619


                  ..
gi 1572721    724 TP 725
Cdd:PHA03379  620 QP 621

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

546-645

2.89e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 39.65 E-value: 2.89e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     546 PTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLT 625
Cdd:pfam02389    8 PCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPE 87

                           90       100
                   ....*....|....*....|
gi 1572721     626 PTTPEKLAPTTPEKPAPTTP 645
Cdd:pfam02389   88 PCHPKAPEPCHPKVPEPCYP 107

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

584-718

2.89e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.18 E-value: 2.89e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    584 PAPTTPKEPAPTTTKKPAPTAPKEPAPTTPketapttpkkltpttpeklAPTTPEKPAPTTPeelapttpeeptpttpee 663
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAP-------------------AAPAPAPPAAAAP------------------ 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    664 papttpKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLK 718
Cdd:PRK12270   81 ------AAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAAAAVAK 129

PRK13914

invasion associated endopeptidase;

371-565

2.99e-03

invasion associated endopeptidase;

Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 41.71 E-value: 2.99e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    371 IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEpAPTTTKSAPT-TPKEPAPTTPKKPAPTTPK 449
Cdd:PRK13914  143 VTSTPVAPTQEVKKETTTQQAAPAAETKTEVKQTTQATTPAPKVAETKE-TPVVDQNATThAVKSGDTIWALSVKYGVSV 221

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    450 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTP-----KEPAPTAPKKPAP----TTPKEPAPTTPKEPAP---TTTKEPSPT 517
Cdd:PRK13914  222 QDIMSWNNLSSSSIYVGQKLAIKQTANTATpkaevKTEAPAAEKQAAPvvkeNTNTNTATTEKKETTTqqqTAPKAPTEA 301

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1572721    518 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 565
Cdd:PRK13914  302 AKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNS 349

PRK07003

DNA polymerase III subunit gamma/tau;

695-906

3.12e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.14 E-value: 3.12e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    695 EPAPTTPKETAPTTPkGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPttpkEPAPTTPKEPA 774
Cdd:PRK07003  359 EPAVTGGGAPGGGVP-ARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATR----AEAPPAAPAPP 433

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    775 PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKgptsttsDKPAPTTPKETAPTTPKEPAPttPKKPAPTTPETPPPTT 854
Cdd:PRK07003  434 ATADRGDDAADGDAPVPAKANARASADSRCDERD-------AQPPADSGSASAPASDAPPDA--AFEPAPRAAAPSAATP 504

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1572721    855 SEVSTPTTTKEpttihkSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAA 906
Cdd:PRK07003  505 AAVPDARAPAA------ASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAA 550

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

483-797

3.76e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.48 E-value: 3.76e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     483 APTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEP--APTTTKSAPTTPKEPSPTTTKEP 560
Cdd:pfam17823  114 ALAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPhaASPAPRTAASSTTAASSTTAASS 193

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     561 APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPK--EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 638
Cdd:pfam17823  194 APTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGtvTAAVGTVTPAALATLAAAAGTVASAAGTINMG 273

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     639 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTtpkePAPTTPKetaPTTPKGTAPTTLK 718
Cdd:pfam17823  274 DPHARRLSPAKHMPSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPS----PSNTTLE---PNTPKSVASTNLA 346

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721     719 EPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKP 797
Cdd:pfam17823  347 VVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDP 425

PHA03378

EBNA-3B; Provisional

367-733

3.91e-03

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 3.91e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    367 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT--KSAPTTPKEPAPTTPKKPA 444
Cdd:PHA03378  449 APTVVLHRPPTQPLEGPTGPLSVQAPLEPWQPLPHPQVTPVILHQPPAQGVQAHGSMLDllEKDDEDMEQRVMATLLPPS 528

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    445 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAP 524
Cdd:PHA03378  529 PPQPRAGRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLGPLQIQPLTSPTTSQLASSAPSYAQTPWPVPHPSQTPEP 608

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    525 TTTKSAPTTTKEP--APTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 602
Cdd:PHA03378  609 PTTQSHIPETSAPrqWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQ 688

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    603 TAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP 682
Cdd:PHA03378  689 WAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPA 768

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721    683 TTPKEPAPTTPKE--PAPTTPKETAPTTPK----GTAPTTLKEPAPTTPKKPAPKEL 733
Cdd:PHA03378  769 AAPGAPTPQPPPQapPAPQQRPRGAPTPQPppqaGPTSMQLMPRAAPGQQGPTKQIL 825

rne

PRK10811

ribonuclease E; Reviewed

602-798

3.99e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.95 E-value: 3.99e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    602 PTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEelaPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA 681
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEA---VAEVVEEPVVVAEPQPEEVVVVETTHPEVIAA 922

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    682 PTTPKEPAPTTPKEP-APTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPtsttsdKPAPTTPKGTAPT 760
Cdd:PRK10811  923 PVTEQPQVITESDVAvAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPV------VAEVAAEVETVTA 996

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1572721    761 TPKEPAPTTPKEPAPTTPKGTAPTTlKEPAPTTPKKPA 798
Cdd:PRK10811  997 VEPEVAPAQVPEATVEHNHATAPMT-RAPAPEYVPEAP 1033

PHA03247

large tegument protein UL36; Provisional

634-843

4.11e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 4.11e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    634 PTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP---------TTPKEPAPTTPKEPAPTTPKET 704
Cdd:PHA03247  247 PLRGDIAAPAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEE 326

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    705 ApTTPKGTAPTTLKEPAPTT------PKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTP 778
Cdd:PHA03247  327 E-DDEDGAMEVVSPLPRPRQhyplgfPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQT 405

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    779 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPA 843
Cdd:PHA03247  406 RPAAPVPASVPTPAPTPVPASAPPPPATPL---------PSAEPGSDDGPAPPPERQPPAPATEP 461

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

474-604

4.26e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.47 E-value: 4.26e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPttpkepaptttksaptttkepaptttkSAPTTPKEPS 553
Cdd:PRK14954  382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSP---------------------------ASAPTPEQQP 434

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    554 PTTTKEPAPTTPKEPAPTTPKKPAP---------------TTPKEPAPTTPKEPAPTTTKKPAPTA 604
Cdd:PRK14954  435 PVARSAPLPPSPQASAPRNVASGKPgvdlgswqgkfmnftRNGSRKQPVQASSSDAAQTGVFEGVA 500

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

633-721

4.34e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.80 E-value: 4.34e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    633 APTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKgt 712
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE-- 116


                  ....*....
gi 1572721    713 aPTTLKEPA 721
Cdd:PRK12270  117 -VTPLRGAA 124

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

545-843

4.35e-03

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 41.57 E-value: 4.35e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   545 APTTPKEP--SPTTTKEPAPTTPKEPAPTTPKKPAP-TTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPketapttp 621
Cdd:COG5665  243 LATPPATPatEEKSSQQPKSQPTSPSGGTTPPSTNQlTTSNTPTSTAKAQPQPPTKKQPAKEPPSDTASGNP-------- 314

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   622 kkltPTTPEKLAPTTPEKPAPTTPEelAPTTPEEPTPTTPeepapttpkAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 701
Cdd:COG5665  315 ----SAPSVLINSDSPTSEDPATAS--VPTTEETTAFTTP---------SSVPSTPAEKDTPATDLATPVSPTPPETSVD 379

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   702 KETAPTTPKGTAPTTLKepaPTTPKKPAPKELAptttkeptSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGT 781
Cdd:COG5665  380 KKVSPDSATSSTKSEKE---GGTASSPMPPNIA--------IGAKDDVDATDPSQEAKEYTKNAPMTPEADSAPESSVRT 448

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721   782 APT--TLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPA 843
Cdd:COG5665  449 EASpsAGSDLEPENTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANETGPPVIRRDSTPSSTADQ 512

PRK14971

DNA polymerase III subunit gamma/tau;

707-832

4.77e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 41.30 E-value: 4.77e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    707 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTL 786
Cdd:PRK14971  368 DASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAV 447

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1572721    787 KEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 832
Cdd:PRK14971  448 RPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

323-448

5.39e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.24 E-value: 5.39e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    323 PTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTpttiKSAPTTPKEPAPtttkSAPTTPKEPAPTTTK 402
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAA----ASAPAAPPAAAP----PAPVAAPAAAAPAAA 437

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1572721    403 EPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTP 448
Cdd:PRK14951  438 PAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP 483

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

384-734

5.48e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.91 E-value: 5.48e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTtKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 463
Cdd:NF033839  155 SSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDI-NQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVAL 233

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    464 PKEPAPTTKEPAP-----TTPKEPAPTAPKKPA--------------PTTPKEP------APTTPKEPAPTTTKEPSPTT 518
Cdd:NF033839  234 IKELDELKKQALSeidnvNTKVEIENTVHKIFAdmdavvtkfkkgltQDTPKEPgnkkpsAPKPGMQPSPQPEKKEVKPE 313

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    519 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP-SPTTTKEPAPTTPK---EPAPTTPKKPAPTTPKEPAPTTPKEP-A 593
Cdd:NF033839  314 PETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLeTPKPEVKPQPEKPKpevKPQPEKPKPEVKPQPETPKPEVKPQPeK 393

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    594 PTTTKKPAPTAPK---EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE-KPAPTTPEelAPTTPEEPTPTTPEEPAPTTP 669
Cdd:NF033839  394 PKPEVKPQPEKPKpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPK--PEVKPQPETPKPEVKPQPEKP 471

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    670 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELA 734
Cdd:NF033839  472 KPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKPKKSLPSTGSISNLA 536

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

585-719

5.58e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 5.58e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    585 APTTPKEPAPTTTKKPAPTAPKePAPTTPKETAPTTPkkltpttpeklAPTTPEKPAPTTPeelapttpeeptpttpeep 664
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAAN-----------IPPKEPVRETATP------------------- 409

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721    665 apttpkaaaPNTPKEPApttpkEPAPTTPKEPAPTTPKETAP--TTPKGTAPTTLKE 719
Cdd:PRK14950  410 ---------PPVPPRPV-----APPVPHTPESAPKLTRAAIPvdEKPKYTPPAPPKE 452

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

632-732

5.77e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 5.77e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    632 LAPTTPEKPAPTTPEelapttPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTT-PKEPAPTTPKEPAPTTPKETAPTTPK 710
Cdd:PRK14950  360 LVPVPAPQPAKPTAA------APSPVRPTPAPSTRPKAAAAANIPPKEPVRETaTPPPVPPRPVAPPVPHTPESAPKLTR 433

                          90       100
                  ....*....|....*....|..
gi 1572721    711 GTAPTtlkEPAPTTPKKPAPKE 732
Cdd:PRK14950  434 AAIPV---DEKPKYTPPAPPKE 452

PRK14971

DNA polymerase III subunit gamma/tau;

372-500

6.06e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 40.91 E-value: 6.06e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    372 KSAPTTPKEPA-PTTTKSAPTTPkePAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:PRK14971  369 ASGGRGPKQHIkPVFTQPAAAPQ--PSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQA 446

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1572721    451 paPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAP 500
Cdd:PRK14971  447 --VRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQK 494

PRK13914

invasion associated endopeptidase;

373-580

6.13e-03

invasion associated endopeptidase;

Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 40.94 E-value: 6.13e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPapttpKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:PRK13914  142 KVTSTPVAPTQEVKKETTTQQAAPAAETKTEV-----KQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVK 216

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKpapTTPKEPAPTTPKEPAP----------TTTKEPSPTTPKEP 522
Cdd:PRK13914  217 YGVSVQDIMSWNNLSSSSIYVGQKLAIKQTANTATPK---AEVKTEAPAAEKQAAPvvkentntntATTEKKETTTQQQT 293

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    523 APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 580
Cdd:PRK13914  294 APKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNSNT 351

PRK11633

cell division protein DedD; Provisional

383-493

6.18e-03

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.99 E-value: 6.18e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    383 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPapttpkeptpt 462
Cdd:PRK11633   57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKV----------- 125

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1572721    463 tpkepapttkEPAPTTPKEPAPTAPKKPAPT 493
Cdd:PRK11633  126 ----------EAPPAPKPEPKPVVEEKAAPT 146

PRK08691

DNA polymerase III subunits gamma and tau; Validated

328-559

6.22e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 40.85 E-value: 6.22e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    328 LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSA-PTTPKEPAPTTTKEPAP 406
Cdd:PRK08691  361 LAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAgPVSNQENNDVPPWEDAP 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    407 TTPKEPAPTTTKEPAPTTTKSAPTTPkepapttpkkpapttPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP-KEPAPT 485
Cdd:PRK08691  441 DEAQTAAGTAQTSAKSIQTASEAETP---------------PENQVSKNKAADNETDAPLSEVPSENPIQATPnDEAVET 505

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572721    486 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSaPTTPKEPSPTTTKE 559
Cdd:PRK08691  506 ETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGG-NNTPSAPPPEFSTE 578

COG5373

Uncharacterized membrane protein [Function unknown];

670-732

6.25e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 6.25e-03

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721   670 KAAAPNTPKEPAPT---TPKEPAPTTPKEPAPTTPkETAPTTPKGTAPTTLKEPAPTTP-KKPAPKE 732
Cdd:COG5373   40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPaAAPAAAS 105

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

488-548

6.29e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 6.29e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572721     488 KKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT 548
Cdd:TIGR00601   77 PKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPST 137

COG5373

Uncharacterized membrane protein [Function unknown];

496-572

6.30e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 6.30e-03

                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721   496 KEPAPTTPKEPAPTTTKEPSPTTPkepaptttksapTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 572
Cdd:COG5373   40 AAEAASAPAEPEPEAAAAATAAAP------------EAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PRK10856

cytoskeleton protein RodZ;

537-613

6.39e-03

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 40.39 E-value: 6.39e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721    537 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTpkePAPTTTKKPAPTAPKepAPTTP 613
Cdd:PRK10856  176 PAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAA---PATPDGAAPLPTDQA--GVSTP 247

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

536-603

6.42e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.82 E-value: 6.42e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    536 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 603
Cdd:PTZ00144  123 APPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

373-520

6.42e-03

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.89 E-value: 6.42e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:COG3469   67 SSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGS 146

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721   453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK 520
Cdd:COG3469  147 TTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPK 214

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

299-419

6.78e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 6.78e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    299 DGKEKTTS----AKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAsttpkeptpttiKSA 374
Cdd:PRK14950  338 DFQLRTTSygqlPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEP------------VRE 405

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1572721    375 PTTPKEPAPTTTKSAPTTPKEPAPTTTKE--PAPTTPKEPAPTTTKE 419
Cdd:PRK14950  406 TATPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK13335

superantigen-like protein SSL3; Reviewed;

304-441

6.96e-03

superantigen-like protein SSL3; Reviewed;

Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.49 E-value: 6.96e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    304 TTSAKETQSIEKTSAkDLAPTSKV--LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEP 381
Cdd:PRK13335   24 TTQSVKAEKIQSTKV-DKVPTLKAerLAMINITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEE 102

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    382 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-----TTTKSAPTTPKEPAPTTPK 441
Cdd:PRK13335  103 QKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPmqstkSDTPQSPTIKQAQTDMTPK 167

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

677-734

7.23e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 40.70 E-value: 7.23e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572721    677 PKEPAPTTPKEPAPTTPKEPAPTTPKETAP---TTPKGTAPTTLKEPAPTTPKKPAPKELA 734
Cdd:PRK14954  395 PEPDLPQPDRHPGPAKPEAPGARPAELPSPasaPTPEQQPPVARSAPLPPSPQASAPRNVA 455

PRK14948

DNA polymerase III subunit gamma/tau;

359-516

7.27e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 40.72 E-value: 7.27e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    359 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP--- 435
Cdd:PRK14948  361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPsln 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    436 ----------------------------------------------------------------------------APTT 439
Cdd:PRK14948  441 leelwqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesqsgsASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572721    440 PKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKepaPTTPKEPAPTTTKEPSP 516
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPP---PPIPEEPTPSPTKDSSP 594

PRK12757

cell division protein FtsN; Provisional

474-523

7.68e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 39.64 E-value: 7.68e-03

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1572721    474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 523
Cdd:PRK12757  131 PATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

322-613

7.82e-03

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 40.91 E-value: 7.82e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     322 APTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKS-APTTPKEPAPTTTKSAPTTPKEPAPTT 400
Cdd:pfam03154  256 PPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSqVPPGPSPAAPGQSQQRIHTPPSQSQLQ 335

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     401 TKEPAPTTPKEPAPTTTKEPAPtttksAPTTPkepaptTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPK 480
Cdd:pfam03154  336 SQQPPREQPLPPAPLSMPHIKP-----PPTTP------IPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLST 404

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     481 EPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPT----TTKSAPTTPKEPSPTT 556
Cdd:pfam03154  405 HHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQhpfvPGGPPPITPPSGPPTS 484

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1572721     557 TKEPAPTT-PKEPAPTTPKKPAPTTPKEPAPTTP-KEPAPTTTKKPAPTAPKEPAPTTP 613
Cdd:pfam03154  485 TSSAMPGIqPPSSASVSSSGPVPAAVSCPLPPVQiKEEALDEAEEPESPPPPPRSPSPE 543

PHA03307

transcriptional regulator ICP4; Provisional

687-922

7.93e-03

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.92 E-value: 7.93e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    687 EPAPTTPKEPAPTTPKETAPTtPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPA 766
Cdd:PHA03307   52 AVTVVAGAAACDRFEPPTGPP-PGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSP 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    767 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTT 846
Cdd:PHA03307  131 APDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRS 210

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572721    847 PETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 922
Cdd:PHA03307  211 SPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS 286

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

748-843

8.83e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 8.83e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    748 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTP 823
Cdd:PRK14951  378 KKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAAsapaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAP 457

                          90       100
                  ....*....|....*....|
gi 1572721    824 KETAPTTPKEPAPTTPKKPA 843
Cdd:PRK14951  458 ETVAIPVRVAPEPAVASAAP 477

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

373-440

8.88e-03

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 8.88e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    373 SAPTTPKEPAPTTTkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP 440
Cdd:NF041121   19 AAPPSPEGPAPTAA-SQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAP 85

PRK14971

DNA polymerase III subunit gamma/tau;

482-606

9.04e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 40.53 E-value: 9.04e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    482 PAPTAPKKPAPTTPKEPAPTTPkePAPTTTKEPSPTTPKEPApTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT--KE 559
Cdd:PRK14971  370 SGGRGPKQHIKPVFTQPAAAPQ--PSAAAAASPSPSQSSAAA-QPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTapQA 446

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1572721    560 PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPK 606
Cdd:PRK14971  447 VRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

2A1904

TIGR00927

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...

473-802

9.10e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]

Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 40.75 E-value: 9.10e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     473 EPAPTTPKEPAPTAPKKPAPTTPKepAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Cdd:TIGR00927  101 EATPSIAMENTPSPPRRTAKITPT--TPKNNYSPTAAGTERVKEDTPATPSRALNHYISTSGRQRVKSYTPKPRGEVKSS 178

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEpAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKEtapTTPKKLTPTTPEKL 632
Cdd:TIGR00927  179 SPTQTREKVRKYTPSPLGRMVNSYAPSTFMT-MPRSHGITPRTTVKDSEITATYKMLETNPSK---RTAGKTTPTPLKGM 254

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     633 APTTP-------EKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA 705
Cdd:TIGR00927  255 TDNTPtfltrevETDLLTSPRSVVEKNTLTTPRRVESNSSTNHWGLVGKNNLTTPQGTVLEHTPATSEGQVTISIMTGSS 334

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     706 PTTPKGTApttlkepAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTaPTTPKEPAPTTPK-------EPAPTTP 778
Cdd:TIGR00927  335 PAETKAST-------AAWKIRNPLSRTSAPAVRIASATFRGLEKNPSTAPST-PATPRVRAVLTTQvhhcvvvKPAPAVP 406

                          330       340
                   ....*....|....*....|....
gi 1572721     779 KGTAPTTLKEPAPTTPkKPAPKEL 802
Cdd:TIGR00927  407 TTPSPSLTTALFPEAP-SPSPSAL 429

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

394-521

9.18e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 40.22 E-value: 9.18e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721   394 KEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkE 473
Cdd:COG3266  256 KAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAA------------------------A 311

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 1572721   474 PAPTTPKEPAPTA--PKKPAPTTPKEPAP-TTPKEPAPTTTKEPSPTTPKE 521
Cdd:COG3266  312 AAPAEAAAPQPTAakPVVTETAAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

705-838

9.69e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 9.69e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721    705 APTTPKGTAPTTLKEPAPTTP-KKPAPKELAPTTTKEPtsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAP 783
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPAAA-------PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAA 441

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1572721    784 TTLKEPAPTTPKKPAPKELAptttkgPTSTTSDKPAPTTPKETAPTTPKEPAPTT 838
Cdd:PRK14951  442 PAAVALAPAPPAQAAPETVA------IPVRVAPEPAVASAAPAPAAAPAAARLTP 490

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

378-435

9.70e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 9.70e-03

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1572721    378 PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP 435
Cdd:PTZ00144  124 PPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTP 181

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

423-518

9.95e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.88 E-value: 9.95e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572721     423 TTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTTPKEPAPTT 502
Cdd:TIGR00601   77 PKTGTGKVAPPAATPTSAPTPTPSPP-------------------------ASPASGMSAAPASAVEEKSPSEESATATA 131

                           90
                   ....*....|....*.
gi 1572721     503 PKEPAPTTTKEPSPTT 518
Cdd:TIGR00601  132 PESPSTSVPSSGSDAA 147

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01