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Conserved domains on  [gi|466730|gb|AAB18569|]
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hypothetical protein [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

glutathione S-transferase family protein( domain architecture ID 11484673)

glutathione S-transferase family protein similar to Escherichia coli YibF, which may be involved in selenium metabolism

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK10357 PRK10357
putative glutathione S-transferase; Provisional
1-202 9.63e-161

putative glutathione S-transferase; Provisional


:

Pssm-ID: 182405 [Multi-domain]  Cd Length: 202  Bit Score: 441.08  E-value: 9.63e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730      1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAML 80
Cdd:PRK10357   1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAPAML 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730     81 PRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC 160
Cdd:PRK10357  81 PRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGTLKTDTVNLATIAIAC 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 466730    161 AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA 202
Cdd:PRK10357 161 AVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEPPKA 202
 
Name Accession Description Interval E-value
PRK10357 PRK10357
putative glutathione S-transferase; Provisional
1-202 9.63e-161

putative glutathione S-transferase; Provisional


Pssm-ID: 182405 [Multi-domain]  Cd Length: 202  Bit Score: 441.08  E-value: 9.63e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730      1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAML 80
Cdd:PRK10357   1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAPAML 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730     81 PRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC 160
Cdd:PRK10357  81 PRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGTLKTDTVNLATIAIAC 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 466730    161 AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA 202
Cdd:PRK10357 161 AVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEPPKA 202
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
1-200 6.04e-41

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 137.72  E-value: 6.04e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730     1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQF---NPLGKVPVLVtEEGECWFDSPIIAEYIELMNVAP 77
Cdd:COG0625   2 MKLYGSPPSPNSRRVRIALEEKGLPYELVPVDLAKGEQKSPEFlalNPLGKVPVLV-DDGLVLTESLAILEYLAERYPEP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730    78 AMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAaqQSEDELLRQREKINRSLDVLEGYLVDGT-LKTDTVNLATI 156
Cdd:COG0625  81 PLLPADPAARARVRQWLAWADGDLHPALRNLLERLAPE--KDPAAIARARAELARLLAVLEARLAGGPyLAGDRFSIADI 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 466730   157 AIACAVGYLNFRRVAPGwcvDRPHLVKLVENLFSRESFARTEPP 200
Cdd:COG0625 159 ALAPVLRRLDRLGLDLA---DYPNLAAWLARLAARPAFQRALAA 199
GST_C_6 cd03205
C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; ...
90-199 1.14e-36

C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs, including Pseudomonas fluorescens GST with a known three-dimensional structure. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Though the three-dimensional structure of Pseudomonas fluorescens GST has been determined, there is no information on its functional characterization.


Pssm-ID: 198314 [Multi-domain]  Cd Length: 109  Bit Score: 123.85  E-value: 1.14e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730    90 VRKIEALADGIMDAGLVSVREQ-ARPAAQQSEDELLRQREKINRSLDVLEGYLVDgtLKTDTVNLATIAIACAVGYLNFR 168
Cdd:cd03205   1 ALRLEALADGICDAAVLIVYERrLRPEEKQHQPWIERQWGKIERALDALEAELGD--LPGGRLTLGDIAVACALGYLDFR 78
                        90       100       110
                ....*....|....*....|....*....|.
gi 466730   169 RVAPGWCVDRPHLVKLVENLFSRESFARTEP 199
Cdd:cd03205  79 FPELDWRAGHPALAAWFARFEARPSFQATPP 109
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
8-71 4.97e-14

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 64.19  E-value: 4.97e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 466730       8 TSPFVRKLSILLLEKGITFE--FINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIE 71
Cdd:pfam13409   1 FSPFSHRVRLALEEKGLPYEieLVDLDPKDKPPELLALNPLGTVPVLVLPDGTVLTDSLVILEYLE 66
 
Name Accession Description Interval E-value
PRK10357 PRK10357
putative glutathione S-transferase; Provisional
1-202 9.63e-161

putative glutathione S-transferase; Provisional


Pssm-ID: 182405 [Multi-domain]  Cd Length: 202  Bit Score: 441.08  E-value: 9.63e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730      1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAML 80
Cdd:PRK10357   1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAPAML 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730     81 PRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC 160
Cdd:PRK10357  81 PRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGTLKTDTVNLATIAIAC 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 466730    161 AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA 202
Cdd:PRK10357 161 AVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEPPKA 202
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
1-200 6.04e-41

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 137.72  E-value: 6.04e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730     1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQF---NPLGKVPVLVtEEGECWFDSPIIAEYIELMNVAP 77
Cdd:COG0625   2 MKLYGSPPSPNSRRVRIALEEKGLPYELVPVDLAKGEQKSPEFlalNPLGKVPVLV-DDGLVLTESLAILEYLAERYPEP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730    78 AMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAaqQSEDELLRQREKINRSLDVLEGYLVDGT-LKTDTVNLATI 156
Cdd:COG0625  81 PLLPADPAARARVRQWLAWADGDLHPALRNLLERLAPE--KDPAAIARARAELARLLAVLEARLAGGPyLAGDRFSIADI 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 466730   157 AIACAVGYLNFRRVAPGwcvDRPHLVKLVENLFSRESFARTEPP 200
Cdd:COG0625 159 ALAPVLRRLDRLGLDLA---DYPNLAAWLARLAARPAFQRALAA 199
GST_C_6 cd03205
C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; ...
90-199 1.14e-36

C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs, including Pseudomonas fluorescens GST with a known three-dimensional structure. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Though the three-dimensional structure of Pseudomonas fluorescens GST has been determined, there is no information on its functional characterization.


Pssm-ID: 198314 [Multi-domain]  Cd Length: 109  Bit Score: 123.85  E-value: 1.14e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730    90 VRKIEALADGIMDAGLVSVREQ-ARPAAQQSEDELLRQREKINRSLDVLEGYLVDgtLKTDTVNLATIAIACAVGYLNFR 168
Cdd:cd03205   1 ALRLEALADGICDAAVLIVYERrLRPEEKQHQPWIERQWGKIERALDALEAELGD--LPGGRLTLGDIAVACALGYLDFR 78
                        90       100       110
                ....*....|....*....|....*....|.
gi 466730   169 RVAPGWCVDRPHLVKLVENLFSRESFARTEP 199
Cdd:cd03205  79 FPELDWRAGHPALAAWFARFEARPSFQATPP 109
GST_N_3 cd03049
GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with ...
1-71 1.41e-29

GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239347 [Multi-domain]  Cd Length: 73  Bit Score: 104.26  E-value: 1.41e-29
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 466730     1 MKLVGSYTSPFVRKLSILLLEKG--ITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIE 71
Cdd:cd03049   1 MKLLYSPTSPYVRKVRVAAHETGlgDDVELVLVNPWSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
8-71 4.97e-14

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 64.19  E-value: 4.97e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 466730       8 TSPFVRKLSILLLEKGITFE--FINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIE 71
Cdd:pfam13409   1 FSPFSHRVRLALEEKGLPYEieLVDLDPKDKPPELLALNPLGTVPVLVLPDGTVLTDSLVILEYLE 66
GST_N_family cd00570
Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic ...
1-71 1.16e-13

Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxin 2 and stringent starvation protein A.


Pssm-ID: 238319 [Multi-domain]  Cd Length: 71  Bit Score: 63.36  E-value: 1.16e-13
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 466730     1 MKLVGSYTSPFVRKLSILLLEKGITFEFIN-ELPYNADNGVAQFNPLGKVPVLVTeEGECWFDSPIIAEYIE 71
Cdd:cd00570   1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPvDLGEGEQEEFLALNPLGKVPVLED-GGLVLTESLAILEYLA 71
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
96-192 1.66e-13

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 63.46  E-value: 1.66e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730      96 LADGIMDAGLVSVReqarPAAQQSEDELLRQREKINRSLDVLEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGW 174
Cdd:pfam00043   1 LMDLRMQIALLPYV----PPEEKKEPEVDEALEKVARVLSALEEVLKGQTyLVGDKLTLADIALAPALLWLYELDPACLR 76
                          90
                  ....*....|....*...
gi 466730     175 cVDRPHLVKLVENLFSRE 192
Cdd:pfam00043  77 -EKFPNLKAWFERVAARP 93
GST_N_GTT2_like cd03051
GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly ...
1-71 7.94e-11

GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.


Pssm-ID: 239349 [Multi-domain]  Cd Length: 74  Bit Score: 55.77  E-value: 7.94e-11
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 466730     1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQF---NPLGKVPVLVTEEGECWFDSPIIAEYIE 71
Cdd:cd03051   1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFlakNPAGTVPVLELDDGTVITESVAICRYLE 74
GST_N_3 pfam13417
Glutathione S-transferase, N-terminal domain;
3-71 5.39e-10

Glutathione S-transferase, N-terminal domain;


Pssm-ID: 433190 [Multi-domain]  Cd Length: 75  Bit Score: 53.77  E-value: 5.39e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 466730       3 LVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECwFDSPIIAEYIE 71
Cdd:pfam13417   1 LYGFPGSPYARRVRIALNEKGLPYEFVPIPPGDHPPELLAKNPLGKVPVLEDDGGIL-CESLAIIDYLE 68
GST_N_Tau cd03058
GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
1-71 2.64e-08

GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin, responses to soil stresses and responses to auxin and cytokinin hormones.


Pssm-ID: 239356 [Multi-domain]  Cd Length: 74  Bit Score: 49.20  E-value: 2.64e-08
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 466730     1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPL-GKVPVLVtEEGECWFDSPIIAEYIE 71
Cdd:cd03058   1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLGNKSELLLASNPVhKKIPVLL-HNGKPICESLIIVEYID 71
GST_N_SspA cd03059
GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP) ...
1-71 5.77e-08

GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.


Pssm-ID: 239357 [Multi-domain]  Cd Length: 73  Bit Score: 48.09  E-value: 5.77e-08
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 466730     1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVtEEGECWFDSPIIAEYIE 71
Cdd:cd03059   1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPDNPPEDLAELNPYGTVPTLV-DRDLVLYESRIIMEYLD 70
GST_N pfam02798
Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to ...
1-70 7.49e-08

Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to a variety of targets. Also included in the alignment, but not GSTs: S-crystallins from squid (similarity to GST previously noted); eukaryotic elongation factors 1-gamma (not known to have GST activity and similarity not previously recognized); HSP26 family of stress-related proteins including auxin-regulated proteins in plants and stringent starvation proteins in E. coli (not known to have GST activity and similarity not previously recognized). The glutathione molecule binds in a cleft between the N- and C-terminal domains - the catalytically important residues are proposed to reside in the N-terminal domain.


Pssm-ID: 460698 [Multi-domain]  Cd Length: 76  Bit Score: 48.07  E-value: 7.49e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 466730       1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQF---NPLGKVPVLVTeEGECWFDSPIIAEYI 70
Cdd:pfam02798   3 LTLYGIRGSPRAHRIRWLLAEKGVEYEIVPLDFGAGPEKSPELlklNPLGKVPALED-GGKKLTESRAILEYI 74
GST_N_Omega cd03055
GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
10-71 6.12e-07

GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega GST genes may be associated with the development of some types of cancer and the age-at-onset of both Alzheimer's and Parkinson's diseases.


Pssm-ID: 239353 [Multi-domain]  Cd Length: 89  Bit Score: 45.81  E-value: 6.12e-07
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 466730    10 PFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIE 71
Cdd:cd03055  28 PYAQRARLVLAAKNIPHEVININLKDKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89
GST_N_EF1Bgamma cd03044
GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part ...
29-70 5.05e-06

GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression.


Pssm-ID: 239342 [Multi-domain]  Cd Length: 75  Bit Score: 43.01  E-value: 5.05e-06
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*
gi 466730    29 INELPYNADNGVAQF---NPLGKVPVLVTEEGECWFDSPIIAEYI 70
Cdd:cd03044  28 IVDFQPGKENKTPEFlkkFPLGKVPAFEGADGFCLFESNAIAYYV 72
GST_N_Beta cd03057
GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
17-70 8.17e-06

GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.


Pssm-ID: 239355 [Multi-domain]  Cd Length: 77  Bit Score: 42.52  E-value: 8.17e-06
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 466730    17 ILLLEKGITFEFIN-ELPYNADNGVA--QFNPLGKVPVLVTEEGECWFDSPIIAEYI 70
Cdd:cd03057  16 IALEELGLPFELVRvDLRTKTQKGADylAINPKGQVPALVLDDGEVLTESAAILQYL 72
GST_N_Phi cd03053
GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related ...
1-70 8.42e-06

GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 239351 [Multi-domain]  Cd Length: 76  Bit Score: 42.25  E-value: 8.42e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 466730     1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQF---NPLGKVPVLVtEEGECWFDSPIIAEYI 70
Cdd:cd03053   2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHlarNPFGQIPALE-DGDLKLFESRAITRYL 73
sspA PRK09481
stringent starvation protein A; Provisional
1-124 2.45e-05

stringent starvation protein A; Provisional


Pssm-ID: 236537 [Multi-domain]  Cd Length: 211  Bit Score: 43.54  E-value: 2.45e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730      1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWfDSPIIAEYIE-------LM 73
Cdd:PRK09481  11 MTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLIDLNPYQSVPTLVDRELTLY-ESRIIMEYLDerfphppLM 89
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 466730     74 NVAPAMLPRDPLESLRVRK-IEALADGIMdAGLVSVREQARpaaQQSEDELL 124
Cdd:PRK09481  90 PVYPVARGESRLMMHRIEKdWYSLMNKIV-NGSASEADAAR---KQLREELL 137
GST_N_1 cd03043
GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from ...
18-70 1.27e-04

GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239341 [Multi-domain]  Cd Length: 73  Bit Score: 39.12  E-value: 1.27e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 466730    18 LLLEK-GITFEFINELPYNADNG--VAQFNPLGKVPVLVTEEGECWfDSPIIAEYI 70
Cdd:cd03043  18 LLLKAaGIPFEEILVPLYTPDTRarILEFSPTGKVPVLVDGGIVVW-DSLAICEYL 72
GST_C_DHAR cd03201
C-terminal, alpha helical domain of Dehydroascorbate Reductase; Glutathione S-transferase (GST) ...
173-201 1.34e-03

C-terminal, alpha helical domain of Dehydroascorbate Reductase; Glutathione S-transferase (GST) C-terminal domain family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, which are monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.


Pssm-ID: 198310  Cd Length: 121  Bit Score: 37.40  E-value: 1.34e-03
                        10        20        30
                ....*....|....*....|....*....|.
gi 466730   173 GWCV--DRPHLVKLVENLFSRESFARTEPPK 201
Cdd:cd03201  81 GWSVpeSLTAVHKYMELLFSRESFKKTKAPD 111
GST_N_GTT1_like cd03046
GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly ...
7-70 3.04e-03

GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 239344 [Multi-domain]  Cd Length: 76  Bit Score: 35.17  E-value: 3.04e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 466730     7 YTSPFVRKLSI--LLLEKGITFEFInelPYNADNGVA------QFNPLGKVPVLVtEEGECWFDSPIIAEYI 70
Cdd:cd03046   4 YHLPRSRSFRIlwLLEELGLPYELV---LYDRGPGEQappeylAINPLGKVPVLV-DGDLVLTESAAIILYL 71
GST_N_etherase_LigE cd03038
GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas ...
9-71 3.20e-03

GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.


Pssm-ID: 239336 [Multi-domain]  Cd Length: 84  Bit Score: 35.40  E-value: 3.20e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 466730     9 SPFVRKLSILLLEKGITFEfINELPYNADNGVAQFNPLG---KVPVLVTEEGECWFDSPIIAEYIE 71
Cdd:cd03038  16 SPNVWKTRLALNHKGLEYK-TVPVEFPDIPPILGELTSGgfyTVPVIVDGSGEVIGDSFAIAEYLE 80
PRK15113 PRK15113
glutathione transferase;
7-95 7.89e-03

glutathione transferase;


Pssm-ID: 185068 [Multi-domain]  Cd Length: 214  Bit Score: 36.09  E-value: 7.89e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 466730      7 YTSPFVRKLSILLLEKGITFEfINELPYNAD----NGVAQFNPLGKVPVLvtEEGECWF-DSPIIAEYIELMNVAP---A 78
Cdd:PRK15113  14 FFSPYVMSAFVALQEKGLPFE-LKTVDLDAGehlqPTYQGYSLTRRVPTL--QHDDFELsESSAIAEYLEERFAPPaweR 90
                         90
                 ....*....|....*..
gi 466730     79 MLPRDPLESLRVRKIEA 95
Cdd:PRK15113  91 IYPADLQARARARQIQA 107
GST_C_2 pfam13410
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
125-186 8.51e-03

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 433185 [Multi-domain]  Cd Length: 67  Bit Score: 33.83  E-value: 8.51e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 466730     125 RQREKINRSLDVLEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVE 186
Cdd:pfam13410   4 RAREQLRAALDALEARLADGPgLLGDRPTLADIALAPVLARLDAAYPGLDLREGYPRLRAWLE 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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