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penicillin-binding protein 2 [Pseudomonas aeruginosa PAO1]
Protein Classification
penicillin-binding protein 2 ( domain architecture ID 11496821 )
penicillin-binding protein (PBP) 2 is a membrane-associated enzyme that is involved in the synthesis of cross-linked peptidoglycan
List of domain hits
Name
Accession
Description
Interval
E-value
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
38-609
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 925.77
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 38 R MYH LQV TQY E YHS TLSE N NR VHVQ PIPP T RG I I F DRNGV II ADNRPSFSL T I TR E RTE DL QK TLD T L VEI L G L TED D R A 117
Cdd:TIGR03423 20 R LFY LQV IRG E EYA TLSE D NR IRLV PIPP P RG L I L DRNGV LL ADNRPSFSL E I VP E KVD DL DA TLD R L AKL L D L DPE D I A 99
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 118 I F E K RM K Q g R R P FEP V P IMFE L N EE QI AR I AVNQ F RLPGV DVATQFV R H YP LK E HF AH SV GYVG R INE QE L KN L D P I NY S 197
Cdd:TIGR03423 100 R F L K EL K R - S R R FEP I P LKSD L T EE EV AR F AVNQ Y RLPGV EIEARLK R Y YP YG E LA AH VL GYVG E INE ED L ER L E P A NY A 178
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 198 G THH IGK T GIE RF YE S EL H G TV GY E EVE T NARGRV L R V L K R TD P I PGKD I VL S ID S RLQ E AAE N AL A GRRGA I V AIQ P S T 277
Cdd:TIGR03423 179 G GDY IGK S GIE KY YE D EL R G KP GY R EVE V NARGRV I R T L S R VP P V PGKD L VL T ID A RLQ Q AAE K AL G GRRGA V V VMD P R T 258
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 278 G DV LAMVS Q PS Y DPNLFV T GIS F K A Y AE L RDSI DRPL Y NR VLR G L YPPGST V KP A VALA G L DA GV V TP TS R VFD PGY Y QL 357
Cdd:TIGR03423 259 G EI LAMVS T PS F DPNLFV D GIS S K D Y KA L LNDP DRPL L NR AIQ G V YPPGST F KP V VALA A L EE GV I TP ET R IYC PGY F QL 338
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 358 PN yd HKY R N W N R Y G D G W V S L ES AI YR S N D T YFY D LA HK LGID RLHAFMS RFGFGQK VAL D MF GE AD GL M PSREWKRK TRR 437
Cdd:TIGR03423 339 GG -- RRF R C W K R G G H G R V D L RK AI EE S C D V YFY Q LA LR LGID KIAEYAK RFGFGQK TGI D LP GE KS GL V PSREWKRK RFG 416
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 438 Q V WYPG E TL ILG IGQGY MQA TP I QLA QM TA L LAN K G HWIR PHL A K T I DGQPPVDPDPMPDI VLR ---- D P A N W D R V DY GM 513
Cdd:TIGR03423 417 Q P WYPG D TL NVS IGQGY VLV TP L QLA VA TA A LAN G G KLYK PHL V K S I EDPDGGVVRRTEPE VLR plpi S P E N L D V V RE GM 496
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 514 QQ VV H G AR GTAR KVGATSA Y LI AGK S GTAQVV AI KQ N E R YD RSKLL ER H RDHALFV G FAP AN NP Q IAVAV M VE N G ES GS G 593
Cdd:TIGR03423 497 RD VV N G PG GTAR RARLGLP Y KM AGK T GTAQVV SL KQ G E K YD AEQIP ER L RDHALFV A FAP YD NP K IAVAV I VE H G GG GS S 576
570
....*....|....*.
gi 9950195 594 V AAP VVKQV MDA W LL D 609
Cdd:TIGR03423 577 A AAP IARKI MDA Y LL G 592
Name
Accession
Description
Interval
E-value
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
38-609
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 925.77
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 38 R MYH LQV TQY E YHS TLSE N NR VHVQ PIPP T RG I I F DRNGV II ADNRPSFSL T I TR E RTE DL QK TLD T L VEI L G L TED D R A 117
Cdd:TIGR03423 20 R LFY LQV IRG E EYA TLSE D NR IRLV PIPP P RG L I L DRNGV LL ADNRPSFSL E I VP E KVD DL DA TLD R L AKL L D L DPE D I A 99
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 118 I F E K RM K Q g R R P FEP V P IMFE L N EE QI AR I AVNQ F RLPGV DVATQFV R H YP LK E HF AH SV GYVG R INE QE L KN L D P I NY S 197
Cdd:TIGR03423 100 R F L K EL K R - S R R FEP I P LKSD L T EE EV AR F AVNQ Y RLPGV EIEARLK R Y YP YG E LA AH VL GYVG E INE ED L ER L E P A NY A 178
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 198 G THH IGK T GIE RF YE S EL H G TV GY E EVE T NARGRV L R V L K R TD P I PGKD I VL S ID S RLQ E AAE N AL A GRRGA I V AIQ P S T 277
Cdd:TIGR03423 179 G GDY IGK S GIE KY YE D EL R G KP GY R EVE V NARGRV I R T L S R VP P V PGKD L VL T ID A RLQ Q AAE K AL G GRRGA V V VMD P R T 258
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 278 G DV LAMVS Q PS Y DPNLFV T GIS F K A Y AE L RDSI DRPL Y NR VLR G L YPPGST V KP A VALA G L DA GV V TP TS R VFD PGY Y QL 357
Cdd:TIGR03423 259 G EI LAMVS T PS F DPNLFV D GIS S K D Y KA L LNDP DRPL L NR AIQ G V YPPGST F KP V VALA A L EE GV I TP ET R IYC PGY F QL 338
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 358 PN yd HKY R N W N R Y G D G W V S L ES AI YR S N D T YFY D LA HK LGID RLHAFMS RFGFGQK VAL D MF GE AD GL M PSREWKRK TRR 437
Cdd:TIGR03423 339 GG -- RRF R C W K R G G H G R V D L RK AI EE S C D V YFY Q LA LR LGID KIAEYAK RFGFGQK TGI D LP GE KS GL V PSREWKRK RFG 416
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 438 Q V WYPG E TL ILG IGQGY MQA TP I QLA QM TA L LAN K G HWIR PHL A K T I DGQPPVDPDPMPDI VLR ---- D P A N W D R V DY GM 513
Cdd:TIGR03423 417 Q P WYPG D TL NVS IGQGY VLV TP L QLA VA TA A LAN G G KLYK PHL V K S I EDPDGGVVRRTEPE VLR plpi S P E N L D V V RE GM 496
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 514 QQ VV H G AR GTAR KVGATSA Y LI AGK S GTAQVV AI KQ N E R YD RSKLL ER H RDHALFV G FAP AN NP Q IAVAV M VE N G ES GS G 593
Cdd:TIGR03423 497 RD VV N G PG GTAR RARLGLP Y KM AGK T GTAQVV SL KQ G E K YD AEQIP ER L RDHALFV A FAP YD NP K IAVAV I VE H G GG GS S 576
570
....*....|....*.
gi 9950195 594 V AAP VVKQV MDA W LL D 609
Cdd:TIGR03423 577 A AAP IARKI MDA Y LL G 592
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
38-611
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 646.88
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 38 R MYH LQV TQYEYHST L S E N NR VHVQ PIP PT RG I I F DRNG VII A D N R P SF SL TITR E RTE D LQK T LDT L VEI LGL TEDD ra 117
Cdd:COG0768 31 R LFY LQV VEGDEYAE L A E E NR IRTV PIP AP RG L I Y DRNG NVL A T N V P VY SL YADP E EVK D PEE T AEK L AKL LGL DPEE -- 108
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 118 i FE K RM K QGR R pf E PV PIMFE L NE E QI ARI av NQFR LPGV D V ATQFV R H YP LK E HF AH SV GYVG R IN eqelknldpinys 197
Cdd:COG0768 109 - LR K KL K KKS R -- F PV YLKRN L SP E EA ARI -- RALK LPGV Y V EAEYK R Y YP YG E LA AH VL GYVG E IN ------------- 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 198 G THH IGK T G I E RF YE SE L H GT V G YEE VE TN ARGRV L R V L - KRTD P I PGKD I VL S IDS R LQ EA AE N AL AG ------- RR GA 269
Cdd:COG0768 171 G GDG IGK S G L E KA YE DL L R GT P G KRR VE VD ARGRV I R D L g EEKP P V PGKD L VL T IDS D LQ KI AE E AL KK aveeyka KS GA 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 270 I V AIQ P S TG DV LAM V S Q PS Y DPNLFV T G isfkayaelrds I D R PL Y NR VLR G L Y P PGST V KP AV A L A G L DA GV V TP TSRV 349
Cdd:COG0768 251 V V VMD P K TG EI LAM A S Y PS F DPNLFV G G ------------ P D E PL R NR AVQ G T Y E PGST F KP FT A A A A L EE GV I TP DTTF 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 350 FD PGYY QLP ny DHKY R N W N R Y G D G WVS L ES A IYR S NDTY FY D LA HK LGID R L HAFMSR FG F GQK VAL D MF GEA D GL M PS R 429
Cdd:COG0768 319 DC PGYY RVG -- GRTI R D W D R G G H G TLT L TE A LAK S SNVG FY K LA LR LGID K L YDYLKK FG L GQK TGI D LP GEA S GL L PS P 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 430 E wkrktrrq V WYPGET LILG IGQG y MQA TP I QLAQ MT A LL AN K G HWIR PHL A K T I DGQPPVDPDPM P DIVL R -- D P ANWD 507
Cdd:COG0768 397 K -------- R WYPGET ATMS IGQG - LSV TP L QLAQ AY A AI AN G G VLVK PHL V K E I VDPDGEVVKEE P EVLR R vi S P ETAE 467
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 508 R V DY GM QQ VV HGAR GTAR KV g A TSA Y LI AGK S GTAQVV A I KQNER Y DR sklle RH R dh A L FVGFAPA N NP QI AVAV M VEN 587
Cdd:COG0768 468 T V RE GM EG VV NEPG GTAR RA - A IPG Y RV AGK T GTAQVV D I GNGGY Y KG ----- RH I -- A S FVGFAPA D NP RY AVAV V VEN 539
570 580
....*....|....*....|....*..
gi 9950195 588 GES --- G SG VAAPV VKQV M D A W L LDEH 611
Cdd:COG0768 540 PGG gay G GT VAAPV FREI M E A Y L RLLG 566
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
1-608
0e+00
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 595.98
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 1 MPQPIHLK D HEKDAR L VR RR VI V GAVAVV LLT L VL V A RM Y H LQ VTQYEYHS T L S EN NR VHVQ PI P P T RGII F DRNG VII A 80
Cdd:PRK10795 2 KKLQNSFR D YTAESA L FV RR AL V AFLGIL LLT G VL I A NL Y N LQ IVRFTDYQ T R S NE NR IKLV PI A P S RGII Y DRNG TPL A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 81 D NR PSFS L TITR E RTED LQ K TLD T L VEILG LT E DD R A I F E K RMKQG RR p F EPV P IMFE L N E E Q I AR I AVNQ F R L PGV D V A 160
Cdd:PRK10795 82 L NR TIYQ L EMMP E KVDN LQ Q TLD A L RSVVD LT D DD I A A F R K ERARS RR - F TSI P VKTN L T E V Q V AR F AVNQ Y R F PGV E V K 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 161 TQFV R H YP LKEHFA H SV GYV GR IN EQELKN LD P ---- I NY SG TH H IGK T GIER F YE SE LHG TV GYEEVE T N A RGRV L R V L 236
Cdd:PRK10795 161 GYQR R Y YP YGSALT H VI GYV SK IN DKDVER LD K egkl A NY AA TH D IGK L GIER Y YE DV LHG KT GYEEVE V N N RGRV I R Q L 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 237 KRTD P IP G K DI V L SI D SR LQ EAA E NA LAG R R G A I V AIQ P S TG DV LA M VS Q PSYDPNLFV T GIS F K A Y AE L RDSID RPL Y N 316
Cdd:PRK10795 241 HEQP P QA G H DI Y L TL D LK LQ QYI E TL LAG S R A A V V VTD P R TG GI LA L VS T PSYDPNLFV D GIS S K D Y SG L LNDPN RPL I N 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 317 R VLR G L YPP G STVKP A VA LAG L D AGV V T PTSRV FDPG YY QLP NYDHK YR N W NRY G D G WVSLESAIYR S N DT Y FY DL A HKL 396
Cdd:PRK10795 321 R ATQ G V YPP A STVKP Y VA VSA L S AGV I T RNTSL FDPG WW QLP GSEKR YR D W KKW G H G RLNVTKSLEE S A DT F FY QV A YDM 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 397 GIDRL HAF M SR FG F G QKVAL D MFG E AD G L MP S REWK R K TRRQV WY P G E T LIL GIGQGY MQ ATPIQ LAQMTAL L A N K G HWI 476
Cdd:PRK10795 401 GIDRL SEW M GK FG Y G HYTGI D LAE E RS G N MP T REWK Q K RFKKP WY Q G D T IPV GIGQGY WT ATPIQ MSKALMT L I N D G IVK 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 477 R PHL -- AKTI DG Q ppvdpdpmp DIVLRD P AN ---------- W DRVDY GM QQ V VHGAR GTA R K VG A TSA Y L IA G KSGTAQV 544
Cdd:PRK10795 481 V PHL lm STAE DG K --------- QVPWVQ P HE ppvgdihsgy W EIAKD GM YG V ANRPN GTA H K YF A SAP Y K IA A KSGTAQV 551
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 9950195 545 VAI K Q NE R Y DRS K LL ER H RDH A L FVG FAP A NNPQ I AVA VMV ENG ES G SG V AA p VVK Q VM D AWL L 608
Cdd:PRK10795 552 FGL K A NE T Y NAH K IA ER L RDH K L MTA FAP Y NNPQ V AVA IIL ENG GA G PA V GT - IMR Q IL D HIM L 614
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
268-604
1.09e-75
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 244.25
E-value: 1.09e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 268 G AI V AIQ P S TG D VLAMV SQ PSYDPN L F VT gisfkayaelrdsidr PL Y NR VLRGL Y P PGST V KP AV ALA G LD A GV VT P TS 347
Cdd:pfam00905 1 G SA V VLD P K TG E VLAMV GK PSYDPN G F IG ---------------- PL R NR AVTSR Y E PGST F KP FT ALA A LD N GV LK P DE 64
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 348 RV FD PGYY Q LPNYD hk YRN WN RYGD G WVS L ES A IYR S NDT Y FYD LA H KLG I D R L HAFMSR FG F G Q K VALDMF GE AD G LMP 427
Cdd:pfam00905 65 TI FD WPGK Q QGGKS -- IGD WN QDQV G IGT L RQ A LEY S SNW Y MQK LA Q KLG A D K L RSYLKK FG Y G N K TGIGLP GE NA G YLT 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 428 SR ewkrktrrqv W YP G E T LIL GIG qgy MQA TP I Q L AQ MT A LL AN K G HWIR PHL A K T I DGQPPVDPDPMPD I vlr DPANWD 507
Cdd:pfam00905 143 PY ---------- W LE G A T ASF GIG --- LTI TP L Q Q AQ AY A AI AN G G KLVP PHL V K S I EDKVDPKVLNKLP I --- SKSTAE 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 508 R V DYGMQQ VV HGAR GT AR kv G A TSA Y LI AGK S GTAQV VAI K QNER YD rskller HRDHAL FVG F APA N NP QI A V AV MVEN 587
Cdd:pfam00905 207 K V KDMLRL VV NDGT GT GT -- A A VPG Y KV AGK T GTAQV AGP K GGGY YD ------- GAQIGW FVG Y APA D NP KY A F AV LIDD 277
330
....*....|....*....
gi 9950195 588 GE -- S G SG VAAP VV K QVMD 604
Cdd:pfam00905 278 PK ry Y G GK VAAP IF K DILE 296
Name
Accession
Description
Interval
E-value
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
38-609
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 925.77
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 38 R MYH LQV TQY E YHS TLSE N NR VHVQ PIPP T RG I I F DRNGV II ADNRPSFSL T I TR E RTE DL QK TLD T L VEI L G L TED D R A 117
Cdd:TIGR03423 20 R LFY LQV IRG E EYA TLSE D NR IRLV PIPP P RG L I L DRNGV LL ADNRPSFSL E I VP E KVD DL DA TLD R L AKL L D L DPE D I A 99
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 118 I F E K RM K Q g R R P FEP V P IMFE L N EE QI AR I AVNQ F RLPGV DVATQFV R H YP LK E HF AH SV GYVG R INE QE L KN L D P I NY S 197
Cdd:TIGR03423 100 R F L K EL K R - S R R FEP I P LKSD L T EE EV AR F AVNQ Y RLPGV EIEARLK R Y YP YG E LA AH VL GYVG E INE ED L ER L E P A NY A 178
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 198 G THH IGK T GIE RF YE S EL H G TV GY E EVE T NARGRV L R V L K R TD P I PGKD I VL S ID S RLQ E AAE N AL A GRRGA I V AIQ P S T 277
Cdd:TIGR03423 179 G GDY IGK S GIE KY YE D EL R G KP GY R EVE V NARGRV I R T L S R VP P V PGKD L VL T ID A RLQ Q AAE K AL G GRRGA V V VMD P R T 258
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 278 G DV LAMVS Q PS Y DPNLFV T GIS F K A Y AE L RDSI DRPL Y NR VLR G L YPPGST V KP A VALA G L DA GV V TP TS R VFD PGY Y QL 357
Cdd:TIGR03423 259 G EI LAMVS T PS F DPNLFV D GIS S K D Y KA L LNDP DRPL L NR AIQ G V YPPGST F KP V VALA A L EE GV I TP ET R IYC PGY F QL 338
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 358 PN yd HKY R N W N R Y G D G W V S L ES AI YR S N D T YFY D LA HK LGID RLHAFMS RFGFGQK VAL D MF GE AD GL M PSREWKRK TRR 437
Cdd:TIGR03423 339 GG -- RRF R C W K R G G H G R V D L RK AI EE S C D V YFY Q LA LR LGID KIAEYAK RFGFGQK TGI D LP GE KS GL V PSREWKRK RFG 416
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 438 Q V WYPG E TL ILG IGQGY MQA TP I QLA QM TA L LAN K G HWIR PHL A K T I DGQPPVDPDPMPDI VLR ---- D P A N W D R V DY GM 513
Cdd:TIGR03423 417 Q P WYPG D TL NVS IGQGY VLV TP L QLA VA TA A LAN G G KLYK PHL V K S I EDPDGGVVRRTEPE VLR plpi S P E N L D V V RE GM 496
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 514 QQ VV H G AR GTAR KVGATSA Y LI AGK S GTAQVV AI KQ N E R YD RSKLL ER H RDHALFV G FAP AN NP Q IAVAV M VE N G ES GS G 593
Cdd:TIGR03423 497 RD VV N G PG GTAR RARLGLP Y KM AGK T GTAQVV SL KQ G E K YD AEQIP ER L RDHALFV A FAP YD NP K IAVAV I VE H G GG GS S 576
570
....*....|....*.
gi 9950195 594 V AAP VVKQV MDA W LL D 609
Cdd:TIGR03423 577 A AAP IARKI MDA Y LL G 592
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
38-611
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 646.88
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 38 R MYH LQV TQYEYHST L S E N NR VHVQ PIP PT RG I I F DRNG VII A D N R P SF SL TITR E RTE D LQK T LDT L VEI LGL TEDD ra 117
Cdd:COG0768 31 R LFY LQV VEGDEYAE L A E E NR IRTV PIP AP RG L I Y DRNG NVL A T N V P VY SL YADP E EVK D PEE T AEK L AKL LGL DPEE -- 108
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 118 i FE K RM K QGR R pf E PV PIMFE L NE E QI ARI av NQFR LPGV D V ATQFV R H YP LK E HF AH SV GYVG R IN eqelknldpinys 197
Cdd:COG0768 109 - LR K KL K KKS R -- F PV YLKRN L SP E EA ARI -- RALK LPGV Y V EAEYK R Y YP YG E LA AH VL GYVG E IN ------------- 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 198 G THH IGK T G I E RF YE SE L H GT V G YEE VE TN ARGRV L R V L - KRTD P I PGKD I VL S IDS R LQ EA AE N AL AG ------- RR GA 269
Cdd:COG0768 171 G GDG IGK S G L E KA YE DL L R GT P G KRR VE VD ARGRV I R D L g EEKP P V PGKD L VL T IDS D LQ KI AE E AL KK aveeyka KS GA 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 270 I V AIQ P S TG DV LAM V S Q PS Y DPNLFV T G isfkayaelrds I D R PL Y NR VLR G L Y P PGST V KP AV A L A G L DA GV V TP TSRV 349
Cdd:COG0768 251 V V VMD P K TG EI LAM A S Y PS F DPNLFV G G ------------ P D E PL R NR AVQ G T Y E PGST F KP FT A A A A L EE GV I TP DTTF 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 350 FD PGYY QLP ny DHKY R N W N R Y G D G WVS L ES A IYR S NDTY FY D LA HK LGID R L HAFMSR FG F GQK VAL D MF GEA D GL M PS R 429
Cdd:COG0768 319 DC PGYY RVG -- GRTI R D W D R G G H G TLT L TE A LAK S SNVG FY K LA LR LGID K L YDYLKK FG L GQK TGI D LP GEA S GL L PS P 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 430 E wkrktrrq V WYPGET LILG IGQG y MQA TP I QLAQ MT A LL AN K G HWIR PHL A K T I DGQPPVDPDPM P DIVL R -- D P ANWD 507
Cdd:COG0768 397 K -------- R WYPGET ATMS IGQG - LSV TP L QLAQ AY A AI AN G G VLVK PHL V K E I VDPDGEVVKEE P EVLR R vi S P ETAE 467
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 508 R V DY GM QQ VV HGAR GTAR KV g A TSA Y LI AGK S GTAQVV A I KQNER Y DR sklle RH R dh A L FVGFAPA N NP QI AVAV M VEN 587
Cdd:COG0768 468 T V RE GM EG VV NEPG GTAR RA - A IPG Y RV AGK T GTAQVV D I GNGGY Y KG ----- RH I -- A S FVGFAPA D NP RY AVAV V VEN 539
570 580
....*....|....*....|....*..
gi 9950195 588 GES --- G SG VAAPV VKQV M D A W L LDEH 611
Cdd:COG0768 540 PGG gay G GT VAAPV FREI M E A Y L RLLG 566
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
1-608
0e+00
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 595.98
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 1 MPQPIHLK D HEKDAR L VR RR VI V GAVAVV LLT L VL V A RM Y H LQ VTQYEYHS T L S EN NR VHVQ PI P P T RGII F DRNG VII A 80
Cdd:PRK10795 2 KKLQNSFR D YTAESA L FV RR AL V AFLGIL LLT G VL I A NL Y N LQ IVRFTDYQ T R S NE NR IKLV PI A P S RGII Y DRNG TPL A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 81 D NR PSFS L TITR E RTED LQ K TLD T L VEILG LT E DD R A I F E K RMKQG RR p F EPV P IMFE L N E E Q I AR I AVNQ F R L PGV D V A 160
Cdd:PRK10795 82 L NR TIYQ L EMMP E KVDN LQ Q TLD A L RSVVD LT D DD I A A F R K ERARS RR - F TSI P VKTN L T E V Q V AR F AVNQ Y R F PGV E V K 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 161 TQFV R H YP LKEHFA H SV GYV GR IN EQELKN LD P ---- I NY SG TH H IGK T GIER F YE SE LHG TV GYEEVE T N A RGRV L R V L 236
Cdd:PRK10795 161 GYQR R Y YP YGSALT H VI GYV SK IN DKDVER LD K egkl A NY AA TH D IGK L GIER Y YE DV LHG KT GYEEVE V N N RGRV I R Q L 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 237 KRTD P IP G K DI V L SI D SR LQ EAA E NA LAG R R G A I V AIQ P S TG DV LA M VS Q PSYDPNLFV T GIS F K A Y AE L RDSID RPL Y N 316
Cdd:PRK10795 241 HEQP P QA G H DI Y L TL D LK LQ QYI E TL LAG S R A A V V VTD P R TG GI LA L VS T PSYDPNLFV D GIS S K D Y SG L LNDPN RPL I N 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 317 R VLR G L YPP G STVKP A VA LAG L D AGV V T PTSRV FDPG YY QLP NYDHK YR N W NRY G D G WVSLESAIYR S N DT Y FY DL A HKL 396
Cdd:PRK10795 321 R ATQ G V YPP A STVKP Y VA VSA L S AGV I T RNTSL FDPG WW QLP GSEKR YR D W KKW G H G RLNVTKSLEE S A DT F FY QV A YDM 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 397 GIDRL HAF M SR FG F G QKVAL D MFG E AD G L MP S REWK R K TRRQV WY P G E T LIL GIGQGY MQ ATPIQ LAQMTAL L A N K G HWI 476
Cdd:PRK10795 401 GIDRL SEW M GK FG Y G HYTGI D LAE E RS G N MP T REWK Q K RFKKP WY Q G D T IPV GIGQGY WT ATPIQ MSKALMT L I N D G IVK 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 477 R PHL -- AKTI DG Q ppvdpdpmp DIVLRD P AN ---------- W DRVDY GM QQ V VHGAR GTA R K VG A TSA Y L IA G KSGTAQV 544
Cdd:PRK10795 481 V PHL lm STAE DG K --------- QVPWVQ P HE ppvgdihsgy W EIAKD GM YG V ANRPN GTA H K YF A SAP Y K IA A KSGTAQV 551
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 9950195 545 VAI K Q NE R Y DRS K LL ER H RDH A L FVG FAP A NNPQ I AVA VMV ENG ES G SG V AA p VVK Q VM D AWL L 608
Cdd:PRK10795 552 FGL K A NE T Y NAH K IA ER L RDH K L MTA FAP Y NNPQ V AVA IIL ENG GA G PA V GT - IMR Q IL D HIM L 614
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
268-604
1.09e-75
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 244.25
E-value: 1.09e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 268 G AI V AIQ P S TG D VLAMV SQ PSYDPN L F VT gisfkayaelrdsidr PL Y NR VLRGL Y P PGST V KP AV ALA G LD A GV VT P TS 347
Cdd:pfam00905 1 G SA V VLD P K TG E VLAMV GK PSYDPN G F IG ---------------- PL R NR AVTSR Y E PGST F KP FT ALA A LD N GV LK P DE 64
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 348 RV FD PGYY Q LPNYD hk YRN WN RYGD G WVS L ES A IYR S NDT Y FYD LA H KLG I D R L HAFMSR FG F G Q K VALDMF GE AD G LMP 427
Cdd:pfam00905 65 TI FD WPGK Q QGGKS -- IGD WN QDQV G IGT L RQ A LEY S SNW Y MQK LA Q KLG A D K L RSYLKK FG Y G N K TGIGLP GE NA G YLT 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 428 SR ewkrktrrqv W YP G E T LIL GIG qgy MQA TP I Q L AQ MT A LL AN K G HWIR PHL A K T I DGQPPVDPDPMPD I vlr DPANWD 507
Cdd:pfam00905 143 PY ---------- W LE G A T ASF GIG --- LTI TP L Q Q AQ AY A AI AN G G KLVP PHL V K S I EDKVDPKVLNKLP I --- SKSTAE 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 508 R V DYGMQQ VV HGAR GT AR kv G A TSA Y LI AGK S GTAQV VAI K QNER YD rskller HRDHAL FVG F APA N NP QI A V AV MVEN 587
Cdd:pfam00905 207 K V KDMLRL VV NDGT GT GT -- A A VPG Y KV AGK T GTAQV AGP K GGGY YD ------- GAQIGW FVG Y APA D NP KY A F AV LIDD 277
330
....*....|....*....
gi 9950195 588 GE -- S G SG VAAP VV K QVMD 604
Cdd:pfam00905 278 PK ry Y G GK VAAP IF K DILE 296
PBP_dimer
pfam03717 Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of ...
63-235
9.29e-56
Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerization. The domain forms a largely disordered 'sugar tongs' structure.
Pssm-ID: 427460 [Multi-domain]
Cd Length: 178
Bit Score: 187.14
E-value: 9.29e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 63 PIP PT RG I I F DRNGV II A D N R P SF SLTIT RERTED -- LQ KT LDT L VEI L GLT ED - D RAIFEK R MKQGR -- RPFE PV P I MF 137
Cdd:pfam03717 1 PIP AP RG E I Y DRNGV VL A T N K P VY SLTIT PSKLKK ad AL KT ALK L AKL L SNY ED l D DEDLTE R FLKMN sy KSYY PV V I KK 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 138 E L N EE QI ARI AV N QFR LPGV DVA T QF VR H YP LK E HF AH SV GYVG R I N E Q EL KNLDPIN YS GTHHI GK T G I E RF YES E L H G 217
Cdd:pfam03717 81 N L S EE EV ARI EE N LLE LPGV SIE T DP VR Y YP YG E LA AH LL GYVG E I T E E EL EKYLDKG YS RGDLV GK S G L E KQ YES V L R G 160
170
....*....|....*...
gi 9950195 218 TV G YEE VE TN A R GRV L R V 235
Cdd:pfam03717 161 KD G VRQ VE VD A L GRV I R E 178
MrcB
COG0744 Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ...
247-643
2.08e-42
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain]
Cd Length: 630
Bit Score: 162.40
E-value: 2.08e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 247 I VLSI D SR LQ E AAE N A LAGR --------- RG A I V AIQ P S TG D VLAMV SQPS Y DPNL F vtgisfkayaelrdsidrply NR 317
Cdd:COG0744 297 I YTTL D PK LQ K AAE K A VKNV lpegkpggl QA A L V VVD P K TG E VLAMV GGRD Y GKSQ F --------------------- NR 355
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 318 VLRGLYP PGST V KP A V AL A G L DA G V v TP TSR V ------ F DP G YYQLP NYD HK YR nwnrygd G W V S L ES A IYR S ND T YFYD 391
Cdd:COG0744 356 ATQAKRQ PGST F KP F V YA A A L EQ G Y - TP ATT V ddepvt F PG G GWSPK NYD GR YR ------- G P V T L RE A LAN S LN T PAVR 427
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 392 LA HKL G I D RLHAFMS R F G FGQKVA ldmfgeadglmpsrewkrktrrqvwy P GET L I LG IGQ gymq AT P IQL A QMT A LL AN 471
Cdd:COG0744 428 LA QEV G L D KVVDTAR R L G ITSPLD -------------------------- P NPS L A LG TSE ---- VS P LEM A SAY A TF AN 477
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 472 K G HWIR PH LAKTI --- DG QPPVDPD P MPDI V LRDPANWD r VDYGM Q Q VV hg AR GT A R KV g ATSAYLI AGK S GT AQ vvaik 548
Cdd:COG0744 478 G G VYVE PH AITKV tda DG KVLYEAK P KCEQ V ISPEVAYL - MTDML Q D VV -- TS GT G R AA - RLPGRPV AGK T GT TN ----- 548
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 549 qnerydrsklle RH RD h A L FVG F apan N PQ IAV AV M V E N ------- GES G SGVA AP VVKQV M D A W L lde H G KLKAEYAE P 621
Cdd:COG0744 549 ------------ DN RD - A W FVG Y ---- T PQ LVT AV W V G N ddnspmg YVT G GSLP AP IWRDF M E A A L --- E G LPVEDFPK P 608
410 420
....*....|....*....|..
gi 9950195 622 VAPLAAAVAK P E P TAA EP EAPA 643
Cdd:COG0744 609 SGVVRIDEPS P T P SGT EP TETS 630
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
61-607
8.04e-38
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 148.43
E-value: 8.04e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 61 VQ PIPPT RG I I F DR N G VII A DNR P SFSL - TITR E RTEDLQKTL D T ---- L VEI L GLTE D DRAIFEKRMKQ GR rp F ep VPI 135
Cdd:PRK15105 63 VQ EVSTS RG M I T DR S G RPL A VSV P VKAI w ADPK E VHDAGGISV D D rwka L ADA L NIPL D QLSARINANPK GR -- F -- IYL 138
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 136 MFEL N EE q I A RI a VNQFR LPG VDVATQFV R H YP LK E HF AH SV G y VGRINE Q elknldpinysgthhi G KT G I E RFYESE L 215
Cdd:PRK15105 139 ARQV N PD - M A DY - IKKLK LPG IHLREESR R Y YP SG E VT AH LI G - FTNVDS Q ---------------- G IE G V E KSFDKW L 199
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 216 H G TV G YEE V ETNAR GRV LRVLKR TD PIPGKDIV LSID S RLQ EAA ---- E NA L A --- GRR G AI V AIQPS TG D VLAM VSQ PS 288
Cdd:PRK15105 200 T G QP G ERI V RKDRY GRV IEDISS TD SQAAHNLA LSID E RLQ ALV yrel N NA V A fnk AES G SA V LVDVN TG E VLAM ANS PS 279
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 289 Y D PN lfvtgisfkaya E L RDSIDRPLY NR VLRGLYP PGSTVKP A V ALAG L DA GVV TPT S r V FDPGY Y QLPN yd H KYRNWN 368
Cdd:PRK15105 280 Y N PN ------------ N L SGTPKDAMR NR AITDVFE PGSTVKP M V VMTA L QR GVV KEN S - V LNTVP Y RING -- H EIKDVA 344
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 369 RY GD gw VS L ESAIYR S NDTYFYD LA HKLGIDR L HAFM SRFG F G QKVA L DMF GE AD GL M P srewkrkt RR Q V W YPG E TLIL 448
Cdd:PRK15105 345 RY SE -- LT L TGVLQK S SNVGVSK LA LAMPSSA L VDTY SRFG L G KATN L GLV GE RS GL Y P -------- QK Q R W SDI E RATF 414
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 449 GI G Q G Y M q A TP I QLA QMT A LLANK G HW i RP HLAKTI D gqppvdpdpmpdivlr D P ANWD RV -- DYGMQQ VVH GARGT A RK 526
Cdd:PRK15105 415 SF G Y G L M - V TP L QLA RVY A TIGSY G IY - RP LSITKV D ---------------- P P VPGE RV fp ESIVRT VVH MMESV A LP 476
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 527 V G ----- A TSA Y L IA G K S GTA QV V A ikqnery DRSKLLERHRDHA lf V G F APA NN P QI A VA V MVENGES G S ---- G V A AP 597
Cdd:PRK15105 477 G G ggvka A IKG Y R IA I K T GTA KK V G ------- PDGRYINKYIAYT -- A G V APA SQ P RF A LV V VINDPQA G K yygg A V S AP 547
570
....*....|
gi 9950195 598 V VKQV M DAW L 607
Cdd:PRK15105 548 V FGAI M GGV L 557
PbpC
COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ...
233-480
1.95e-12
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain]
Cd Length: 773
Bit Score: 70.25
E-value: 1.95e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 233 L R V L K R TD P i P G KD I VLSI D SR LQ EAA E NALAGRR ---------- G A IVAIQPS TG D VLA M V - S QPSY D PNLF -- V TGI s 299
Cdd:COG4953 261 A R R L L R QL P - G G TR I RTTL D AG LQ RRL E RLVRRYV rrlkqngihn A A VLVVDNR TG E VLA Y V g S ADFF D ASRQ gq V DMV - 338
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 300 fkayaelrdsidrplyn R V LR G lyp PGST V KP AV - A LA g LD A G VVT P TSRVF D - P --- G Y Y QLP N Y D HKYR nwnrygd G W 374
Cdd:COG4953 339 ----------------- R A LR S --- PGST L KP FL y G LA - LD Q G LIH P ETLLA D v P tsf G G Y RPE N F D GTFQ ------- G P 390
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 375 VS LES A IY RS NDTYFYD L AHK LG ID R LH A FMS R F G FGQ kvaldmfgeadg L M P SR E wkrktrrqvw YP G ET LILG i G QG y 454
Cdd:COG4953 391 VS ARE A LA RS LNIPAVR L LEA LG PA R FY A RLR R A G LRL ------------ L L P PA E ---------- HY G LS LILG - G AE - 446
250 260
....*....|....*....|....*.
gi 9950195 455 mq A T PIQ L AQMT A L LA NK G HWIRPH L 480
Cdd:COG4953 447 -- V T LEE L VGLY A A LA RG G EARPLR L 470
mrcB
PRK09506 bifunctional glycosyl transferase/transpeptidase; Reviewed
244-541
1.35e-06
bifunctional glycosyl transferase/transpeptidase; Reviewed
Pssm-ID: 236544 [Multi-domain]
Cd Length: 830
Bit Score: 51.69
E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 244 G KD I VLSI D SRL Q E AAE N A ------------- L AGRRG A I V AIQPST G D V L AMV -- S Q P SY dpnlfv T G isfkayaelrd 308
Cdd:PRK09506 433 G VK I FTTL D PVS Q D AAE K A veegipalkkqrk L SDLET A M V VVDRFS G E V R AMV gg S E P QF ------ A G ----------- 495
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 309 sidrpl YNR VLRGLYPP GS TV KPA VA L AG L ------------- DA -- GVVT P TSR V FD P gyyql P N Y D HKYR nwnrygd G 373
Cdd:PRK09506 496 ------ YNR AMQARRSI GS LA KPA TY L TA L sqpdkyrlntwia DA pi SLRQ P NGQ V WS P ----- Q N D D RRFS ------- G 557
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 374 W V S L ES A IY RS NDTYFYD L AHK LG IDRLHAFMSRF G FGQKVA ldmfgead GLM P S rewkrktrrqvwypget LI LG I gqg 453
Cdd:PRK09506 558 R V M L VD A LT RS MNVPTVN L GMA LG LPAVTDTWIKL G VPKDQL -------- NPV P A ----------------- ML LG A --- 609
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 454 y MQA TPI QL AQ MTALL A NK G HW ----- I R PHL A K ti DG QPPVDPD P MPDIVLRDP A NWDRV d Y G MQQVV hg A RGT A R KV G 528
Cdd:PRK09506 610 - LNL TPI EV AQ AFQTI A SG G NR aplsa L R SVI A E -- DG KVLYQSF P QAERAVPAQ A AYLTL - Y T MQQVV -- Q RGT G R QL G 683
330
....*....|....
gi 9950195 529 A T - SAYLI AGK S GT 541
Cdd:PRK09506 684 A K y PNLHL AGK T GT 697
PRK14850
PRK14850 penicillin-binding protein 1b; Provisional
242-541
3.51e-05
penicillin-binding protein 1b; Provisional
Pssm-ID: 237835 [Multi-domain]
Cd Length: 764
Bit Score: 47.15
E-value: 3.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 242 IP G KD I VLSI D SRL Q E AAE N A ------------- L AGRRG A I V A I QPST G D V L A MVS qp S YD P NL fv T G isfkayaelrd 308
Cdd:PRK14850 377 FS G TK I FTTL D YIS Q N AAE Q A vkigipilkrkkr L KDLEV A M V I I DRFS G E V R A LIG -- S SK P EF -- N G ----------- 441
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 309 sidrpl YNR V L RGLYPP GS TV KP AVA L AG L DAG --------- VV TP T S RVF D P G Y Y QL P nydhky R N W N RYGD G W V S L ES 379
Cdd:PRK14850 442 ------ YNR A L KARRSI GS LS KP ITY L TA L SQP ekyhlntwi SD TP I S IKL D N G Q Y WT P ------ K N N N FSFS G K V M L ID 509
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 380 A IYR S NDTYFYD L AHK LG IDR L HAFMSRF G FGQKVALD mfgeadgl M PS rewkrktrrqvwypgetlilg I GQ G YMQA TP 459
Cdd:PRK14850 510 A LIH S INIPTVH L SIN LG LKK L VDSWILL G ISSNYITP -------- L PS --------------------- I SL G AINL TP 560
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9950195 460 IQL AQ MTALLANK G HWIRPHLAKT I --- D GQPPVDPD P MPDI V LRDP A NW d RVD Y G MQQVV hg AR GTA RKV G AT - SAYLI 535
Cdd:PRK14850 561 MEV AQ VFQIIGSG G YKSSLSSIRS I isd D NKVLYQNF P QSKH V ESSQ A SY - LTL Y A MQQVV -- KS GTA KSL G TI f KEFSL 637
....*.
gi 9950195 536 AGK S GT 541
Cdd:PRK14850 638 AGK T GT 643
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
