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Conserved domains on  [gi|133777076|gb|AAH23926|]
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Coiled-coil domain containing 32 [Mus musculus]

Protein Classification

CCDC32 superfamily-containing protein( domain architecture ID 140315)

CCDC32 superfamily-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CCDC32 super family cl20868
Coiled-coil domain containing 32; This family of proteins is found in eukaryotes. Proteins in ...
 1-67 7.82e-34

Coiled-coil domain containing 32; This family of proteins is found in eukaryotes. Proteins in this family are typically between 160 and 188 amino acids in length. The gene that encodes this protein is C15orf57 but its protein product is called Protein CCDC32 (Coiled-coil domain containing 32). The exact function of this protein is still unknown.


The actual alignment was detected with superfamily member pfam14989:

Pssm-ID: 464424  Cd Length: 150  Bit Score: 112.86  E-value: 7.82e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 133777076    1 MLRTLAQAKKECWDRFLQEKLASEFFVDGLDSDESTLEHFKRWLQPDKVAISTEEVQFLIPPESQAE 67
Cdd:pfam14989  84 MLRSLSQAKKECWDRFLHDGQTSELFQQGLDSDESALEHLKRWLLPEKVAISVEELEYLLPPDQLEE 150
 
Name Accession Description Interval E-value
CCDC32 pfam14989
Coiled-coil domain containing 32; This family of proteins is found in eukaryotes. Proteins in ...
 1-67 7.82e-34

Coiled-coil domain containing 32; This family of proteins is found in eukaryotes. Proteins in this family are typically between 160 and 188 amino acids in length. The gene that encodes this protein is C15orf57 but its protein product is called Protein CCDC32 (Coiled-coil domain containing 32). The exact function of this protein is still unknown.


Pssm-ID: 464424  Cd Length: 150  Bit Score: 112.86  E-value: 7.82e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 133777076    1 MLRTLAQAKKECWDRFLQEKLASEFFVDGLDSDESTLEHFKRWLQPDKVAISTEEVQFLIPPESQAE 67
Cdd:pfam14989  84 MLRSLSQAKKECWDRFLHDGQTSELFQQGLDSDESALEHLKRWLLPEKVAISVEELEYLLPPDQLEE 150
 
Name Accession Description Interval E-value
CCDC32 pfam14989
Coiled-coil domain containing 32; This family of proteins is found in eukaryotes. Proteins in ...
 1-67 7.82e-34

Coiled-coil domain containing 32; This family of proteins is found in eukaryotes. Proteins in this family are typically between 160 and 188 amino acids in length. The gene that encodes this protein is C15orf57 but its protein product is called Protein CCDC32 (Coiled-coil domain containing 32). The exact function of this protein is still unknown.


Pssm-ID: 464424  Cd Length: 150  Bit Score: 112.86  E-value: 7.82e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 133777076    1 MLRTLAQAKKECWDRFLQEKLASEFFVDGLDSDESTLEHFKRWLQPDKVAISTEEVQFLIPPESQAE 67
Cdd:pfam14989  84 MLRSLSQAKKECWDRFLHDGQTSELFQQGLDSDESALEHLKRWLLPEKVAISVEELEYLLPPDQLEE 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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