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Conserved domains on  [gi|71296798|gb|AAH32845|]
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C5orf22 protein [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5330 super family cl44214
Uncharacterized conserved protein, DUF2336 family [Function unknown];
23-71 6.65e-03

Uncharacterized conserved protein, DUF2336 family [Function unknown];


The actual alignment was detected with superfamily member COG5330:

Pssm-ID: 444118 [Multi-domain]  Cd Length: 351  Bit Score: 36.05  E-value: 6.65e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 71296798  23 LTEEDLVDIVDTR--IHQL-----EDLEATFAD-LCDGDDEETVQRWASNPG-------MESLV 71
Cdd:COG5330 103 LTDEDLVEIARSGsqEHLLaiarrPDLSEAVTDaLVERGDEEVVRALLANPGarlseasLERLV 166
 
Name Accession Description Interval E-value
COG5330 COG5330
Uncharacterized conserved protein, DUF2336 family [Function unknown];
23-71 6.65e-03

Uncharacterized conserved protein, DUF2336 family [Function unknown];


Pssm-ID: 444118 [Multi-domain]  Cd Length: 351  Bit Score: 36.05  E-value: 6.65e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 71296798  23 LTEEDLVDIVDTR--IHQL-----EDLEATFAD-LCDGDDEETVQRWASNPG-------MESLV 71
Cdd:COG5330 103 LTDEDLVEIARSGsqEHLLaiarrPDLSEAVTDaLVERGDEEVVRALLANPGarlseasLERLV 166
 
Name Accession Description Interval E-value
COG5330 COG5330
Uncharacterized conserved protein, DUF2336 family [Function unknown];
23-71 6.65e-03

Uncharacterized conserved protein, DUF2336 family [Function unknown];


Pssm-ID: 444118 [Multi-domain]  Cd Length: 351  Bit Score: 36.05  E-value: 6.65e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 71296798  23 LTEEDLVDIVDTR--IHQL-----EDLEATFAD-LCDGDDEETVQRWASNPG-------MESLV 71
Cdd:COG5330 103 LTDEDLVEIARSGsqEHLLaiarrPDLSEAVTDaLVERGDEEVVRALLANPGarlseasLERLV 166
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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