Lysosomal-associated membrane protein 1 [Mus musculus]
lysosome-associated membrane glycoprotein( domain architecture ID 15859493)
lysosome-associated membrane glycoprotein (LAMP) may play roles in phagocytosis, autophagy, lipid transport, and aging; such as human LAMP1 that plays an important role in lysosome biogenesis, lysosomal pH regulation, autophagy and cholesterol homeostasis; contains a EGFR-like transmembrane domain
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Lamp | pfam01299 | Lysosome-associated membrane glycoprotein (Lamp); |
208-354 | 4.71e-68 | |||
Lysosome-associated membrane glycoprotein (Lamp); : Pssm-ID: 460152 Cd Length: 148 Bit Score: 212.05 E-value: 4.71e-68
|
|||||||
TM_EGFR-like | cd12087 | Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine ... |
371-400 | 5.13e-04 | |||
Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane (TM) helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. They are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. The TM domain not only serves as a membrane anchor, but also plays an important role in receptor dimerization and optimal activation. Mutations in the TM domain of EGFR family RTKs have been associated with increased breast cancer risk. : Pssm-ID: 213052 Cd Length: 38 Bit Score: 37.12 E-value: 5.13e-04
|
|||||||
Name | Accession | Description | Interval | E-value | |||
Lamp | pfam01299 | Lysosome-associated membrane glycoprotein (Lamp); |
208-354 | 4.71e-68 | |||
Lysosome-associated membrane glycoprotein (Lamp); Pssm-ID: 460152 Cd Length: 148 Bit Score: 212.05 E-value: 4.71e-68
|
|||||||
TM_EGFR-like | cd12087 | Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine ... |
371-400 | 5.13e-04 | |||
Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane (TM) helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. They are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. The TM domain not only serves as a membrane anchor, but also plays an important role in receptor dimerization and optimal activation. Mutations in the TM domain of EGFR family RTKs have been associated with increased breast cancer risk. Pssm-ID: 213052 Cd Length: 38 Bit Score: 37.12 E-value: 5.13e-04
|
|||||||
Name | Accession | Description | Interval | E-value | |||
Lamp | pfam01299 | Lysosome-associated membrane glycoprotein (Lamp); |
208-354 | 4.71e-68 | |||
Lysosome-associated membrane glycoprotein (Lamp); Pssm-ID: 460152 Cd Length: 148 Bit Score: 212.05 E-value: 4.71e-68
|
|||||||
TM_EGFR-like | cd12087 | Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine ... |
371-400 | 5.13e-04 | |||
Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane (TM) helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. They are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. The TM domain not only serves as a membrane anchor, but also plays an important role in receptor dimerization and optimal activation. Mutations in the TM domain of EGFR family RTKs have been associated with increased breast cancer risk. Pssm-ID: 213052 Cd Length: 38 Bit Score: 37.12 E-value: 5.13e-04
|
|||||||
Blast search parameters | ||||
|