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Conserved domains on  [gi|47480075|gb|AAH70915|]
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Dnajb9 protein [Rattus norvegicus]

Protein Classification

J domain-containing protein( domain architecture ID 1001220)

J domain-containing protein similar to molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  9644977|8016869|15170475
SCOP:  4000605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 27-134 5.30e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 145.44  E-value: 5.30e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075    27 YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG-S 105
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGfN 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 47480075   106 PFEQSFNFNFDDLFKDF--NLFGQNQNTRSK 134
Cdd:TIGR02349  82 GFDIGFFGDFGDIFGDFfgGGGGSGRRRRSG 112
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 27-134 5.30e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 145.44  E-value: 5.30e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075    27 YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG-S 105
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGfN 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 47480075   106 PFEQSFNFNFDDLFKDF--NLFGQNQNTRSK 134
Cdd:TIGR02349  82 GFDIGFFGDFGDIFGDFfgGGGGSGRRRRSG 112
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 23-127 5.71e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 137.97  E-value: 5.71e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   23 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGqr 101
Cdd:PRK10767   2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPgDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG-- 79

                         90       100
                 ....*....|....*....|....*...
gi 47480075  102 snGSPFEQSFNFN--FDDLFKDFnlFGQ 127
Cdd:PRK10767  80 --GGGFGGGGGFGdiFGDIFGDI--FGG 103
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 26-110 5.94e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.66  E-value: 5.94e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075  26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG 104
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80


                ....*.
gi 47480075 105 SPFEQS 110
Cdd:COG0484  81 AAAEAA 86
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 26-87 5.91e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 118.34  E-value: 5.91e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47480075    26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSPDAEAKFREIAEAYETLSDANRRKEYD 87
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
25-176 3.01e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 112.99  E-value: 3.01e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHsaftngkgqrsNG 104
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGH-----------DG 73

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47480075  105 SPFEQSFNFNFDDLFKDFnlFGQNQNtrSKKHFENHFQ---TRQDGSSRQRHHFQEFSFGGGLfDDMFEDMEKMF 176
Cdd:NF037946  74 VDGEGGFGFDAFDVFSSF--FETINK--SGAFLDDSVDesvSADDDLDRLFDDSKEPSFTSGL-DEIVQFWEAFI 143
DnaJ smart00271
DnaJ molecular chaperone homology domain;
25-82 1.24e-26

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 96.92  E-value: 1.24e-26
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075     25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANR 82
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 26-79 1.98e-26

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 96.46  E-value: 1.98e-26
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47480075  26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSD 79
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 27-134 5.30e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 145.44  E-value: 5.30e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075    27 YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG-S 105
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGfN 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 47480075   106 PFEQSFNFNFDDLFKDF--NLFGQNQNTRSK 134
Cdd:TIGR02349  82 GFDIGFFGDFGDIFGDFfgGGGGSGRRRRSG 112
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 23-127 5.71e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 137.97  E-value: 5.71e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   23 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGqr 101
Cdd:PRK10767   2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPgDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG-- 79

                         90       100
                 ....*....|....*....|....*...
gi 47480075  102 snGSPFEQSFNFN--FDDLFKDFnlFGQ 127
Cdd:PRK10767  80 --GGGFGGGGGFGdiFGDIFGDI--FGG 103
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 23-135 3.37e-37

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 133.36  E-value: 3.37e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   23 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRS 102
Cdd:PRK14291   1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 47480075  103 NGSPFEQSFNFNFDDLFKDF-------NLFGQNQNTRSKK 135
Cdd:PRK14291  81 GQEGFSDFGGGNIEDILEDVfdifgfgDIFGRRRATRERR 120
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 26-110 5.94e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.66  E-value: 5.94e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075  26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG 104
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80


                ....*.
gi 47480075 105 SPFEQS 110
Cdd:COG0484  81 AAAEAA 86
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 26-87 5.91e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 118.34  E-value: 5.91e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47480075    26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSPDAEAKFREIAEAYETLSDANRRKEYD 87
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 24-126 7.45e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 119.18  E-value: 7.45e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   24 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNgkgQRSN 103
Cdd:PRK14298   4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDN---QYSA 80

                         90       100
                 ....*....|....*....|...
gi 47480075  104 GSPFEQSFNFNFDDLFKDFnlFG 126
Cdd:PRK14298  81 EDIFRGADFGGFGDIFEMF--FG 101
PRK14280 PRK14280
molecular chaperone DnaJ;
22-122 2.73e-31

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 117.52  E-value: 2.73e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   22 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNG-KGQ 100
Cdd:PRK14280   1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGfGGG 80

                         90       100
                 ....*....|....*....|..
gi 47480075  101 RSNGSPFeqSFNFNFDDLFKDF 122
Cdd:PRK14280  81 GFGGGDF--GGGFGFEDIFSSF 100
PRK14295 PRK14295
molecular chaperone DnaJ;
25-119 1.08e-30

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 116.10  E-value: 1.08e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYD----IIGHSAFTNGKG 99
Cdd:PRK14295   9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKgDAKAEERFKEISEAYDVLSDEKKRKEYDearsLFGNGGFRPGPG 88

                         90       100
                 ....*....|....*....|
gi 47480075  100 QRSNGspfeqSFNFNFDDLF 119
Cdd:PRK14295  89 GGGGG-----GFNFDLGDLF 103
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 22-126 3.02e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 113.11  E-value: 3.02e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   22 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQR 101
Cdd:PRK14299   1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGP 80

                         90       100
                 ....*....|....*....|....*...
gi 47480075  102 SNGSPFEQSFN-FNFDDlFKDF--NLFG 126
Cdd:PRK14299  81 PPGPPGGGDFSgFNVGD-FSDFfqQLFG 107
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 22-132 4.60e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 114.41  E-value: 4.60e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   22 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQR 101
Cdd:PRK14276   1 MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGG 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 47480075  102 SNG-SPFEQSFNF-NFDDLFKDFnlFGQNQNTR 132
Cdd:PRK14276  81 AGGfGGFDGSGGFgGFEDIFSSF--FGGGGARR 111
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 22-132 2.76e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 112.35  E-value: 2.76e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   22 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQR 101
Cdd:PRK14296   1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFS 80

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 47480075  102 SNGSPFEQSFN-------FNFDDLFKDFnlFGQNQNTR 132
Cdd:PRK14296  81 SNFGDFEDLFSnmgssgfSSFTNIFSDF--FGSNKSDY 116
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
25-176 3.01e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 112.99  E-value: 3.01e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHsaftngkgqrsNG 104
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGH-----------DG 73

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47480075  105 SPFEQSFNFNFDDLFKDFnlFGQNQNtrSKKHFENHFQ---TRQDGSSRQRHHFQEFSFGGGLfDDMFEDMEKMF 176
Cdd:NF037946  74 VDGEGGFGFDAFDVFSSF--FETINK--SGAFLDDSVDesvSADDDLDRLFDDSKEPSFTSGL-DEIVQFWEAFI 143
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 25-134 3.18e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 111.78  E-value: 3.18e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSN 103
Cdd:PRK14294   4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPgDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGFS 83

                         90       100       110
                 ....*....|....*....|....*....|.
gi 47480075  104 GspFEQSFNfNFDDLFKDFNLFGQNQNTRSK 134
Cdd:PRK14294  84 G--FDDIFS-SFGDIFEDFFGFGGGRRGRSR 111
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 21-135 1.05e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 111.05  E-value: 1.05e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   21 ILASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGkG 99
Cdd:PRK14277   1 MAAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPgDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPG-G 79

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 47480075  100 QRSNG---SPFEQSFnFNFD-----DLFKDF--NLFGqnqNTRSKK 135
Cdd:PRK14277  80 FGQGGfgqGGFGGGG-FDFDfggfgDIFEDIfgDFFG---TGRRRA 121
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 21-122 2.11e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 109.91  E-value: 2.11e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   21 ILASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFtngkgq 100
Cdd:PRK14283   1 MAEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGM------ 74

                         90       100
                 ....*....|....*....|...
gi 47480075  101 rsNGSPFEQSF-NFNFDDLFKDF 122
Cdd:PRK14283  75 --DGFSQEDIFnNINFEDIFQGF 95
PRK14297 PRK14297
molecular chaperone DnaJ;
22-134 3.72e-28

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 109.10  E-value: 3.72e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   22 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQ 100
Cdd:PRK14297   1 MASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKgNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGF 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47480075  101 RSNG-SPFEQSFNFNFDDLFKDFNLFGQNQNTRSK 134
Cdd:PRK14297  81 GSGGfGGFDFSDMGGFGDIFDSFFGGGFGSSSRRR 115
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 25-152 5.08e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 109.13  E-value: 5.08e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFtnGKGQRSN 103
Cdd:PRK14281   3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNpDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV--GSSAASG 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 47480075  104 GSPFEQSFNFNFDDLFKDFN-LFGQNQNTR--SKKHFENHFqtrqDGSSRQR 152
Cdd:PRK14281  81 GGPGYGGGGGDFNDIFSAFNdMFGGGARRGggSPFGFEDVF----GGGGRRR 128
PRK10266 PRK10266
curved DNA-binding protein;
25-136 8.41e-28

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 106.83  E-value: 8.41e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDII----GHSAFtNGKGQ 100
Cdd:PRK10266   4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLwqhrNDPQF-NRQFQ 82

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 47480075  101 RSNGSPFEQSfnfNFDDLFKDFnlFGQNQNTRSKKH 136
Cdd:PRK10266  83 HGDGQSFNAE---DFDDIFSSI--FGQHARQSRQRP 113
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 26-85 3.59e-27

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 98.53  E-value: 3.59e-27
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47480075  26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKE 85
Cdd:COG5407   1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGdPKAEERFKEINEAYELLSDAEKRAR 61
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 25-126 5.87e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 105.98  E-value: 5.87e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSPDAEAKFREIAEAYETLSDANRRKEYDIIGHsAFTNGKGQRSN 103
Cdd:PRK14301   4 RDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNpDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGH-AGVNGNGGFGG 82

                         90       100
                 ....*....|....*....|...
gi 47480075  104 GSPFEQSFNfNFDDLFKDFNLFG 126
Cdd:PRK14301  83 FSSAEDIFS-HFSDIFGDLFGFS 104
DnaJ smart00271
DnaJ molecular chaperone homology domain;
25-82 1.24e-26

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 96.92  E-value: 1.24e-26
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075     25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANR 82
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 26-79 1.98e-26

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 96.46  E-value: 1.98e-26
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47480075  26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSD 79
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
PRK14289 PRK14289
molecular chaperone DnaJ;
23-126 2.45e-26

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 104.53  E-value: 2.45e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   23 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSaftnGKGQR 101
Cdd:PRK14289   3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPgDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA----GVGGA 78

                         90       100
                 ....*....|....*....|....*.
gi 47480075  102 SNGSPFEQSfNFNFDDLFKDF-NLFG 126
Cdd:PRK14289  79 AGGGGFSGE-GMSMEDIFSMFgDIFG 103
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 24-135 2.94e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 103.94  E-value: 2.94e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   24 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTN--GKGQR 101
Cdd:PRK14300   2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNqqSRGGG 81

                         90       100       110
                 ....*....|....*....|....*....|....
gi 47480075  102 SNGSPFEQSFNFNFDDLFKDFNLFGQNQNTRSKK 135
Cdd:PRK14300  82 GNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSK 115
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 22-127 2.96e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 103.92  E-value: 2.96e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   22 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQ 100
Cdd:PRK14286   1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKgNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGG 80

                         90       100
                 ....*....|....*....|....*...
gi 47480075  101 rsngspFEQSFNFNFDDLFKDF-NLFGQ 127
Cdd:PRK14286  81 ------FGQGAYTDFSDIFGDFgDIFGD 102
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 25-135 1.19e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 102.38  E-value: 1.19e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSN 103
Cdd:PRK14285   3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKgNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 47480075  104 GSPFEqsfnfNFDDLFKDF-NLF--------GQNQNTRSKK 135
Cdd:PRK14285  83 SGGFS-----GFSDIFEDFgDIFdsfftgnrGQDKNRKHEK 118
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 23-135 3.91e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 101.02  E-value: 3.91e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   23 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--KSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQ 100
Cdd:PRK14282   2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHpeNRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 47480075  101 RSNGSPFeqsfnfnFDDLFKD---------FNLFGQNQNTRSKK 135
Cdd:PRK14282  82 TESGGGF-------FEDIFKDfenifnrdiFDIFFGERRTQEEQ 118
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
25-95 1.92e-24

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 92.47  E-value: 1.92e-24
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47480075  25 KNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPD--AEAKFREIAEAYETLSDANRRKEYD-IIGHSAFT 95
Cdd:COG2214   5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKalAEELFQRLNEAYEVLSDPERRAEYDrELGQSGKG 78
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 24-132 8.78e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 97.43  E-value: 8.78e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   24 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGqrsn 103
Cdd:PRK14278   2 ARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGG---- 77

                         90       100
                 ....*....|....*....|....*....
gi 47480075  104 GSPFEQSFNfNFDDLFKDFnlFGQNQNTR 132
Cdd:PRK14278  78 GGGFGGGFG-GLGDVFEAF--FGGGAASR 103
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 22-122 2.99e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 95.85  E-value: 2.99e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   22 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQR 101
Cdd:PRK14287   1 MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGG 80

                         90       100
                 ....*....|....*....|.
gi 47480075  102 SNGspfeqSFNfNFDDLFKDF 122
Cdd:PRK14287  81 GAG-----DFG-GFSDIFDMF 95
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 24-128 4.10e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 95.38  E-value: 4.10e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   24 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--KSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFtNGKGQR 101
Cdd:PRK14290   2 AKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHpgNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDF-GAGGSN 80

                         90       100
                 ....*....|....*....|....*..
gi 47480075  102 SNGSPFEQSFNFNfdDLFKDFnlFGQN 128
Cdd:PRK14290  81 FNWDNFTHFSDIN--DIFNQI--FGGN 103
PRK14293 PRK14293
molecular chaperone DnaJ;
26-99 4.11e-22

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 92.75  E-value: 4.11e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47480075   26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKG 99
Cdd:PRK14293   4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAG 77
PRK14279 PRK14279
molecular chaperone DnaJ;
23-119 4.78e-22

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 92.87  E-value: 4.78e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   23 ASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYD----IIGHSAFtnG 97
Cdd:PRK14279   7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPgDPAAEERFKAVSEAHDVLSDPAKRKEYDetrrLFAGGGF--G 84

                         90       100
                 ....*....|....*....|....*...
gi 47480075   98 KGQRSNGSPF------EQSFNFNFDDLF 119
Cdd:PRK14279  85 GRRFDGGGGFggfgtgGDGAEFNLNDLF 112
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 26-99 1.61e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 91.44  E-value: 1.61e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47480075   26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKG 99
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPgDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAG 76
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 26-126 1.96e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 90.72  E-value: 1.96e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGqrsnGS 105
Cdd:PRK14292   3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPG----GD 78

                         90       100
                 ....*....|....*....|.
gi 47480075  106 PFeQSFNFNFDDLFKdfNLFG 126
Cdd:PRK14292  79 PF-GGMGFDPMDIFE--QLFG 96
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 24-99 5.07e-17

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 78.71  E-value: 5.07e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47480075   24 SKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDaeaKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKG 99
Cdd:PTZ00037  27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPE---KFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ 99
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
22-84 2.19e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 65.59  E-value: 2.19e-14
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075  22 LASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDK--NKSPD-----AEAKFREIAEAYETLSDANRRK 84
Cdd:COG1076   1 MQLDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaAGLPEeeqrlALQKAAAINEAYETLKDPRGID 70
PRK14288 PRK14288
molecular chaperone DnaJ;
26-134 1.16e-13

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 68.95  E-value: 1.16e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   26 NYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDIIGHSAFTNGKGQRSNG 104
Cdd:PRK14288   4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAgDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQSDF 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 47480075  105 SPFEQSFNFNFDDLFKdfnlFGQNQNTRSK 134
Cdd:PRK14288  84 SDFFEDLGSFFEDAFG----FGARGSKRQK 109
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 27-91 2.65e-11

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 62.50  E-value: 2.65e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47480075    27 YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGH 91
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGY 639
hscB PRK01356
co-chaperone HscB; Provisional
 26-134 2.47e-09

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 54.50  E-value: 2.47e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47480075   26 NYYDILGVPK--SASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIA----EAYETLSDANRRKEYDIIGHSAFTNGKG 99
Cdd:PRK01356   3 NYFQLLGLPQeyNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIAselnNAYSTLKDALKRAEYMLLLQNINLNDEK 82

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47480075  100 QRSNGSPFEQSFNFNFDDLFKDFNLFGQNQNTRSK 134
Cdd:PRK01356  83 TRSLLSPLELSIFWDEMERIENTILFSDLEKIKNK 117
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 26-87 6.25e-07

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 49.26  E-value: 6.25e-07
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47480075  26 NYYDILGVPK---SASERQIKKAFHKLAMKYHPDKNK---SPDAEAKFREIAEAYETLSDANRRKEYD 87
Cdd:COG5269  44 DLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAaggNKGCDEFFKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
28-75 1.86e-04

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 41.34  E-value: 1.86e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 47480075   28 YDILGVPKSASERQIKKAFHKLAMKYHPDK--NK--SPD----AEAKFREIAEAYE 75
Cdd:PRK09430 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvAKglPPEmmemAKEKAQEIQAAYE 258
hscB TIGR00714
Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K ...
 39-110 1.52e-03

Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock. [Protein fate, Protein folding and stabilization]


Pssm-ID: 211601 [Multi-domain]  Cd Length: 155  Bit Score: 37.94  E-value: 1.52e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47480075    39 ERQIKKAFHKLAMKYHPDKNKSPDAEA----KFREIAEAYETLSDANRRKEYDIIGHSAFTNG--KGQRSNGSPFEQS 110
Cdd:TIGR00714   5 QSRLRKRYRQLQAQYHPDASGMAQEQLaasqQSTTLNQAYHTLKDPLRRAEYMLKLLNIDLTQeqTSERDTAFPMELL 82
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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