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Conserved domains on  [gi|21430446|gb|AAM50901|]
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LP06455p [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1676 super family cl06781
Protein of unknown function (DUF1676); This family contains sequences derived from proteins of ...
 203-261 7.25e-09

Protein of unknown function (DUF1676); This family contains sequences derived from proteins of unknown function expressed by Drosophila melanogaster and Anopheles gambiae.


The actual alignment was detected with superfamily member pfam07898:

Pssm-ID: 462310  Cd Length: 172  Bit Score: 54.59  E-value: 7.25e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 21430446   203 RRHQHQDKKQFQMFIPMYLAATTFGWTMV--AAKAVGLLTLKALILSKIAFVVAAIVLIKK 261
Cdd:pfam07898 112 RKKKFKKKKLKKMLLPLLLALKLKLGALLplALGGLALLAGKALLLGKIALLLSAIIGLKK 172
 
Name Accession Description Interval E-value
DUF1676 pfam07898
Protein of unknown function (DUF1676); This family contains sequences derived from proteins of ...
 203-261 7.25e-09

Protein of unknown function (DUF1676); This family contains sequences derived from proteins of unknown function expressed by Drosophila melanogaster and Anopheles gambiae.


Pssm-ID: 462310  Cd Length: 172  Bit Score: 54.59  E-value: 7.25e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 21430446   203 RRHQHQDKKQFQMFIPMYLAATTFGWTMV--AAKAVGLLTLKALILSKIAFVVAAIVLIKK 261
Cdd:pfam07898 112 RKKKFKKKKLKKMLLPLLLALKLKLGALLplALGGLALLAGKALLLGKIALLLSAIIGLKK 172
 
Name Accession Description Interval E-value
DUF1676 pfam07898
Protein of unknown function (DUF1676); This family contains sequences derived from proteins of ...
 203-261 7.25e-09

Protein of unknown function (DUF1676); This family contains sequences derived from proteins of unknown function expressed by Drosophila melanogaster and Anopheles gambiae.


Pssm-ID: 462310  Cd Length: 172  Bit Score: 54.59  E-value: 7.25e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 21430446   203 RRHQHQDKKQFQMFIPMYLAATTFGWTMV--AAKAVGLLTLKALILSKIAFVVAAIVLIKK 261
Cdd:pfam07898 112 RKKKFKKKKLKKMLLPLLLALKLKLGALLplALGGLALLAGKALLLGKIALLLSAIIGLKK 172
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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