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Conserved domains on  [gi|25986841|gb|AAM93756|]
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heat shock protein 90, partial [Naegleria gruberi]

Protein Classification

HSP90 family protein( domain architecture ID 1903338)

HSP90 (heat shock protein 90) family protein functions as a molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved in cell cycle control and signal transduction

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
HSP90 super family cl46693
Hsp90 protein;
1-634 0e+00

Hsp90 protein;


The actual alignment was detected with superfamily member PTZ00272:

Pssm-ID: 481033  Cd Length: 701  Bit Score: 913.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841    1 SNKEIFLRELISNASDALDKLRHISLTEPSVLDTERELCIRIIPDKVNKTLTLIDTGVAMTKADLINCLGTIARSGTKQF 80
Cdd:PTZ00272  24 SNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAF 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   81 MEMLQAGADVSLIGQFGVGFYSAYLVADRVVVTTKHNDDEQYIWESAAGGSFTITLDETGErLTRGTKIVLHMKEDQLEY 160
Cdd:PTZ00272 104 MEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPESD-MKRGTRITLHLKEDQMEY 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  161 LEERKLKDLVKKHSEFIGYPISLYVEKTEEKEVEEDEEKKDEEKTD---EPKIEEVD---EDKEKKTKKVKEVTHEWELL 234
Cdd:PTZ00272 183 LEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEdgeEPKVEEVKegdEGKKKKTKKVKEVTKEYEVQ 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  235 NKTKPLWTRDAKTVTKEEYASFYKALTNDWEEHLAVKHFSVEGNFEFKAILFAPKRAPFDLFEPKKKLNNIKLYVRRVFI 314
Cdd:PTZ00272 263 NKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIMFVPKRAPFDMFEPNKKRNNIKLYVRRVFI 342
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  315 MDNCEELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNLVKKCIEMFSEISENKEDWKSFYEAFGKNLKLGIH 394
Cdd:PTZ00272 343 MDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVAENKEDYKQFYEQFGKNIKLGIH 422
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  395 EDSQNRQKLAELLRFSSSTSGEDWTSFKEYVERMKEGQEDIYYITGESKKAVANSPFIEKCAKKGIEVLYLTDPIDEYMV 474
Cdd:PTZ00272 423 EDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFIEQARRRGLEVLFMTEPIDEYVM 502
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  475 QQLKEFDGKKLVCVTKEGLKLPETEEEKKKKEELKASFEALCKLMKDILGDKVEKVVVSDRLGDSPCCLVTGEYGWSSNM 554
Cdd:PTZ00272 503 QQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSERLSTSPCILVTSEFGWSAHM 582
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  555 ERIMKAQALKDNSMAAYMVSKKTMEINPENSIVNELRKKAEANKADKTLRDLVWLLFDISLLTSGFSLEEPSTFAGRIHR 634
Cdd:PTZ00272 583 EQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINR 662
 
Name Accession Description Interval E-value
PTZ00272 PTZ00272
heat shock protein 83 kDa (Hsp83); Provisional
1-634 0e+00

heat shock protein 83 kDa (Hsp83); Provisional


Pssm-ID: 240341  Cd Length: 701  Bit Score: 913.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841    1 SNKEIFLRELISNASDALDKLRHISLTEPSVLDTERELCIRIIPDKVNKTLTLIDTGVAMTKADLINCLGTIARSGTKQF 80
Cdd:PTZ00272  24 SNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAF 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   81 MEMLQAGADVSLIGQFGVGFYSAYLVADRVVVTTKHNDDEQYIWESAAGGSFTITLDETGErLTRGTKIVLHMKEDQLEY 160
Cdd:PTZ00272 104 MEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPESD-MKRGTRITLHLKEDQMEY 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  161 LEERKLKDLVKKHSEFIGYPISLYVEKTEEKEVEEDEEKKDEEKTD---EPKIEEVD---EDKEKKTKKVKEVTHEWELL 234
Cdd:PTZ00272 183 LEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEdgeEPKVEEVKegdEGKKKKTKKVKEVTKEYEVQ 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  235 NKTKPLWTRDAKTVTKEEYASFYKALTNDWEEHLAVKHFSVEGNFEFKAILFAPKRAPFDLFEPKKKLNNIKLYVRRVFI 314
Cdd:PTZ00272 263 NKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIMFVPKRAPFDMFEPNKKRNNIKLYVRRVFI 342
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  315 MDNCEELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNLVKKCIEMFSEISENKEDWKSFYEAFGKNLKLGIH 394
Cdd:PTZ00272 343 MDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVAENKEDYKQFYEQFGKNIKLGIH 422
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  395 EDSQNRQKLAELLRFSSSTSGEDWTSFKEYVERMKEGQEDIYYITGESKKAVANSPFIEKCAKKGIEVLYLTDPIDEYMV 474
Cdd:PTZ00272 423 EDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFIEQARRRGLEVLFMTEPIDEYVM 502
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  475 QQLKEFDGKKLVCVTKEGLKLPETEEEKKKKEELKASFEALCKLMKDILGDKVEKVVVSDRLGDSPCCLVTGEYGWSSNM 554
Cdd:PTZ00272 503 QQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSERLSTSPCILVTSEFGWSAHM 582
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  555 ERIMKAQALKDNSMAAYMVSKKTMEINPENSIVNELRKKAEANKADKTLRDLVWLLFDISLLTSGFSLEEPSTFAGRIHR 634
Cdd:PTZ00272 583 EQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINR 662
HSP90 pfam00183
Hsp90 protein;
159-634 0e+00

Hsp90 protein;


Pssm-ID: 459703  Cd Length: 516  Bit Score: 779.04  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   159 EYLEERKLKDLVKKHSEFIGYPISLYVEKTE----EKEVEEDEEKKDEEKTDEPKIEEVDEDKEKKTKKV-KEVTHEWEL 233
Cdd:pfam00183   1 EYLEEKKIKELVKKYSEFINFPIYLWVEKEEevevPDEEEEEEEEEEEEEDDDPKVEEEDEEEEKKKTKKvKETVWEWEL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   234 LNKTKPLWTRDAKTVTKEEYASFYKALTNDWEEHLAVKHFSVEGNFEFKAILFAPKRAPFDLFEPKKKLNNIKLYVRRVF 313
Cdd:pfam00183  81 LNKTKPIWTRNPKEVTEEEYAEFYKSLSKDWEDPLAVKHFSVEGEVEFKSLLFIPKRAPFDLFENKKKKNNIKLYVRRVF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   314 IMDNCEELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNLVKKCIEMFSEISENKEDWKSFYEAFGKNLKLGI 393
Cdd:pfam00183 161 ITDDFEDLIPEYLNFVKGVVDSDDLPLNVSRETLQQNKILKVIKKKLVRKALDMFKEIAEEKEDYKKFWKEFGKNLKLGI 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   394 HEDSQNRQKLAELLRFSSSTSGEDWTSFKEYVERMKEGQEDIYYITGESKKAVANSPFIEKCAKKGIEVLYLTDPIDEYM 473
Cdd:pfam00183 241 IEDSSNRNKLAKLLRFYSSKSGDELTSLDDYVSRMKEGQKHIYYITGESKEEVENSPFLERLKKKGYEVLYLTDPIDEYA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   474 VQQLKEFDGKKLVCVTKEGLKLPETEEEKKKKEELKASFEALCKLMKDILGDKVEKVVVSDRLGDSPCCLVTGEYGWSSN 553
Cdd:pfam00183 321 VQQLKEFDGKKLVNVAKEGLELEEDEEEKKKDEELKKEFEPLTKWLKDVLGDKVEKVVVSNRLVDSPCVLVTSQYGWSAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   554 MERIMKAQAL-KDNSMAAYMVSKKTMEINPENSIVNELRKKAEANKADKTLRDLVWLLFDISLLTSGFSLEEPSTFAGRI 632
Cdd:pfam00183 401 MERIMKAQALrKDSSMSSYMSSKKTLEINPRHPIIKELLKRVEADKDDKTAKDLALLLYETALLRSGFSLEDPASFASRI 480

                  ..
gi 25986841   633 HR 634
Cdd:pfam00183 481 YR 482
HtpG COG0326
Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, ...
1-634 0e+00

Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440095 [Multi-domain]  Cd Length: 616  Bit Score: 712.66  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   1 SNKEIFLRELISNASDALDKLRHISLTEPSVLDTERELCIRIIPDKVNKTLTLIDTGVAMTKADLINCLGTIARSGTKQF 80
Cdd:COG0326  25 SNKEIFLRELISNASDAIDKLRFLALTDPELKEEDGDLKIRIEVDKEAKTLTISDNGIGMTREEVIENLGTIAKSGTREF 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  81 MEMLQ--AGADVSLIGQFGVGFYSAYLVADRVVVTTKH--NDDEQYIWESAAGGSFTItldETGERLTRGTKIVLHMKED 156
Cdd:COG0326 105 LEKLKgdQKKDSDLIGQFGVGFYSAFMVADKVEVVTRSagEDAEAVRWESDGDGEYTI---EEAEKAERGTEITLHLKED 181
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 157 QLEYLEERKLKDLVKKHSEFIGYPISLyvekteekeveedeekkdeektdepkieevdedkekktKKVKEVTHEWELLNK 236
Cdd:COG0326 182 AEEFLEEWRLREIIKKYSDFIPVPIKM--------------------------------------EGEEEETEEDETINS 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 237 TKPLWTRDAKTVTKEEYASFYKALTNDWEEHLAVKHFSVEGNFEFKAILFAPKRAPFDLFEPKKKlNNIKLYVRRVFIMD 316
Cdd:COG0326 224 ATALWTRSKSEITDEEYKEFYKHLFHDFEDPLFWIHLNVEGPFEYTGLLYIPKKAPFDLYDRDRK-GGIKLYVKRVFIMD 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 317 NCEELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNLVKKCIEMFSEISEN-KEDWKSFYEAFGKNLKLGIHE 395
Cdd:COG0326 303 DAEDLLPEYLRFVRGVVDSPDLPLNVSREILQEDRQLKKIRKAITKKVLDELEKLAKNdREKYEKFWKEFGLVLKEGALE 382
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 396 DSQNRQKLAELLRFSSSTSGEdWTSFKEYVERMKEGQEDIYYITGESKKAVANSPFIEKCAKKGIEVLYLTDPIDEYMVQ 475
Cdd:COG0326 383 DFKNREKIADLLRFESTKEGG-YVTLAEYVERMKEGQKKIYYITGESREAAEQSPHLEIFKAKGIEVLLLTDPIDEFLIS 461
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 476 QLKEFDGKKLVCVTKEGLKLPETEEEKKKKEELKAsFEALCKLMKDILGDKVEKVVVSDRLGDSPCCLVTGEYGWSSNME 555
Cdd:COG0326 462 HLEEFDGKKFKSVDSGDLDLDKLEEKKESEEEEEE-FKPLLERFKEALGDKVKDVRVSARLTDSPACLVADEGDMSRRME 540
                       570       580       590       600       610       620       630
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 25986841 556 RIMKAQalkDNSMAAymvSKKTMEINPENSIVnelrKKAEANKADKTLRDLVWLLFDISLLTSGFSLEEPSTFAGRIHR 634
Cdd:COG0326 541 KMLKAM---GQDMPE---AKPILEINPNHPLV----KKLAAEEDEELFKDLAELLYDQALLAEGGLLEDPAAFVKRLNK 609
HATPase_Hsp90-like cd16927
Histidine kinase-like ATPase domain of human cytosolic Hsp90 and its homologs including ...
1-177 2.00e-99

Histidine kinase-like ATPase domain of human cytosolic Hsp90 and its homologs including Escherichia coli HtpG, and related domains; This family includes the histidine kinase-like ATPase (HATPase) domains of 90 kilodalton heat-shock protein (Hsp90) eukaryotic homologs including cytosolic Hsp90, mitochondrial TRAP1 (tumor necrosis factor receptor-associated protein 1), GRP94 (94 kDa glucose-regulated protein) of the endoplasmic reticulum (ER), and chloroplast Hsp90C. It also includes the bacterial homologs of Hsp90, known as HtpG (High temperature protein G). Hsp90 family of chaperones assist other proteins to fold correctly, stabilizes them against heat stress, and aids in protein degradation.


Pssm-ID: 340404 [Multi-domain]  Cd Length: 189  Bit Score: 301.36  E-value: 2.00e-99
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   1 SNKEIFLRELISNASDALDKLRHISLTEPSVLDTERELCIRIIPDKVNKTLTLIDTGVAMTKADLINCLGTIARSGTKQF 80
Cdd:cd16927  13 SNKEIFLRELISNASDALDKLRYLSLTDPSLLDDDPELEIRISPDKENRTLTISDTGIGMTKEELINNLGTIARSGTKAF 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  81 MEMLQAGA-DVSLIGQFGVGFYSAYLVADRVVVTTKHN-DDEQYIWESAAGGSFTITLDEtgERLTRGTKIVLHMKEDQL 158
Cdd:cd16927  93 LEALQEGAkDSDLIGQFGVGFYSAFMVADKVTVTTKSAgDDEGYRWESDGGGSYTIEEAE--GELGRGTKITLHLKEDAK 170
                       170
                ....*....|....*....
gi 25986841 159 EYLEERKLKDLVKKHSEFI 177
Cdd:cd16927 171 EFLEEARIKELVKKYSDFI 189
HATPase_c smart00387
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
2-139 1.13e-07

Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.


Pssm-ID: 214643 [Multi-domain]  Cd Length: 111  Bit Score: 50.34  E-value: 1.13e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841      2 NKEIFLRELISNASDALDKLRHisltepsvldTERELCIRIIPDKVNKTLTLIDTGVAMTKADLinclgtiarsgTKQFM 81
Cdd:smart00387   1 GDPDRLRQVLSNLLDNAIKYTP----------EGGRITVTLERDGDHVEITVEDNGPGIPPEDL-----------EKIFE 59
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 25986841     82 EMLQAGADVSLIGQFGVGFYSAYLVADRVVVTTKHNDDEQyiwesaAGGSFTITLDET 139
Cdd:smart00387  60 PFFRTDKRSRKIGGTGLGLSIVKKLVELHGGEISVESEPG------GGTTFTITLPLE 111
 
Name Accession Description Interval E-value
PTZ00272 PTZ00272
heat shock protein 83 kDa (Hsp83); Provisional
1-634 0e+00

heat shock protein 83 kDa (Hsp83); Provisional


Pssm-ID: 240341  Cd Length: 701  Bit Score: 913.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841    1 SNKEIFLRELISNASDALDKLRHISLTEPSVLDTERELCIRIIPDKVNKTLTLIDTGVAMTKADLINCLGTIARSGTKQF 80
Cdd:PTZ00272  24 SNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAF 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   81 MEMLQAGADVSLIGQFGVGFYSAYLVADRVVVTTKHNDDEQYIWESAAGGSFTITLDETGErLTRGTKIVLHMKEDQLEY 160
Cdd:PTZ00272 104 MEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPESD-MKRGTRITLHLKEDQMEY 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  161 LEERKLKDLVKKHSEFIGYPISLYVEKTEEKEVEEDEEKKDEEKTD---EPKIEEVD---EDKEKKTKKVKEVTHEWELL 234
Cdd:PTZ00272 183 LEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEdgeEPKVEEVKegdEGKKKKTKKVKEVTKEYEVQ 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  235 NKTKPLWTRDAKTVTKEEYASFYKALTNDWEEHLAVKHFSVEGNFEFKAILFAPKRAPFDLFEPKKKLNNIKLYVRRVFI 314
Cdd:PTZ00272 263 NKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIMFVPKRAPFDMFEPNKKRNNIKLYVRRVFI 342
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  315 MDNCEELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNLVKKCIEMFSEISENKEDWKSFYEAFGKNLKLGIH 394
Cdd:PTZ00272 343 MDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVAENKEDYKQFYEQFGKNIKLGIH 422
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  395 EDSQNRQKLAELLRFSSSTSGEDWTSFKEYVERMKEGQEDIYYITGESKKAVANSPFIEKCAKKGIEVLYLTDPIDEYMV 474
Cdd:PTZ00272 423 EDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFIEQARRRGLEVLFMTEPIDEYVM 502
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  475 QQLKEFDGKKLVCVTKEGLKLPETEEEKKKKEELKASFEALCKLMKDILGDKVEKVVVSDRLGDSPCCLVTGEYGWSSNM 554
Cdd:PTZ00272 503 QQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSERLSTSPCILVTSEFGWSAHM 582
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  555 ERIMKAQALKDNSMAAYMVSKKTMEINPENSIVNELRKKAEANKADKTLRDLVWLLFDISLLTSGFSLEEPSTFAGRIHR 634
Cdd:PTZ00272 583 EQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINR 662
HSP90 pfam00183
Hsp90 protein;
159-634 0e+00

Hsp90 protein;


Pssm-ID: 459703  Cd Length: 516  Bit Score: 779.04  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   159 EYLEERKLKDLVKKHSEFIGYPISLYVEKTE----EKEVEEDEEKKDEEKTDEPKIEEVDEDKEKKTKKV-KEVTHEWEL 233
Cdd:pfam00183   1 EYLEEKKIKELVKKYSEFINFPIYLWVEKEEevevPDEEEEEEEEEEEEEDDDPKVEEEDEEEEKKKTKKvKETVWEWEL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   234 LNKTKPLWTRDAKTVTKEEYASFYKALTNDWEEHLAVKHFSVEGNFEFKAILFAPKRAPFDLFEPKKKLNNIKLYVRRVF 313
Cdd:pfam00183  81 LNKTKPIWTRNPKEVTEEEYAEFYKSLSKDWEDPLAVKHFSVEGEVEFKSLLFIPKRAPFDLFENKKKKNNIKLYVRRVF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   314 IMDNCEELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNLVKKCIEMFSEISENKEDWKSFYEAFGKNLKLGI 393
Cdd:pfam00183 161 ITDDFEDLIPEYLNFVKGVVDSDDLPLNVSRETLQQNKILKVIKKKLVRKALDMFKEIAEEKEDYKKFWKEFGKNLKLGI 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   394 HEDSQNRQKLAELLRFSSSTSGEDWTSFKEYVERMKEGQEDIYYITGESKKAVANSPFIEKCAKKGIEVLYLTDPIDEYM 473
Cdd:pfam00183 241 IEDSSNRNKLAKLLRFYSSKSGDELTSLDDYVSRMKEGQKHIYYITGESKEEVENSPFLERLKKKGYEVLYLTDPIDEYA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   474 VQQLKEFDGKKLVCVTKEGLKLPETEEEKKKKEELKASFEALCKLMKDILGDKVEKVVVSDRLGDSPCCLVTGEYGWSSN 553
Cdd:pfam00183 321 VQQLKEFDGKKLVNVAKEGLELEEDEEEKKKDEELKKEFEPLTKWLKDVLGDKVEKVVVSNRLVDSPCVLVTSQYGWSAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   554 MERIMKAQAL-KDNSMAAYMVSKKTMEINPENSIVNELRKKAEANKADKTLRDLVWLLFDISLLTSGFSLEEPSTFAGRI 632
Cdd:pfam00183 401 MERIMKAQALrKDSSMSSYMSSKKTLEINPRHPIIKELLKRVEADKDDKTAKDLALLLYETALLRSGFSLEDPASFASRI 480

                  ..
gi 25986841   633 HR 634
Cdd:pfam00183 481 YR 482
PRK05218 PRK05218
heat shock protein 90; Provisional
1-634 0e+00

heat shock protein 90; Provisional


Pssm-ID: 235366 [Multi-domain]  Cd Length: 613  Bit Score: 735.38  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841    1 SNKEIFLRELISNASDALDKLRHISLTEPSVLDTERELCIRIIPDKVNKTLTLIDTGVAMTKADLINCLGTIARSGTKQF 80
Cdd:PRK05218  25 SNKEIFLRELISNASDAIDKLRFEALTDPALYEGDGDLKIRISFDKEARTLTISDNGIGMTREEVIENLGTIAKSGTKEF 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   81 MEMLQ--AGADVSLIGQFGVGFYSAYLVADRVVVTTKH--NDDEQYIWESAAGGSFTItldETGERLTRGTKIVLHMKED 156
Cdd:PRK05218 105 LEKLKgdQKKDSQLIGQFGVGFYSAFMVADKVTVITRSagPAAEAVRWESDGEGEYTI---EEIEKEERGTEITLHLKED 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  157 QLEYLEERKLKDLVKKHSEFIGYPISLyvekteekeveedeekkdeektdepkieevdedkekktkkvkeVTHEWELLNK 236
Cdd:PRK05218 182 EDEFLDEWRIRSIIKKYSDFIPVPIKL-------------------------------------------EKEEEETINS 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  237 TKPLWTRDAKTVTKEEYASFYKALTNDWEEHLAVKHFSVEGNFEFKAILFAPKRAPFDLFEPKKKlNNIKLYVRRVFIMD 316
Cdd:PRK05218 219 ASALWTRSKSEITDEEYKEFYKHLAHDFDDPLFWIHNNVEGPFEYTGLLYIPKKAPFDLFNRDRK-GGLKLYVKRVFIMD 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  317 NCEELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNLVKKCIEMFSEISEN-KEDWKSFYEAFGKNLKLGIHE 395
Cdd:PRK05218 298 DAEELLPEYLRFVKGVIDSEDLPLNVSREILQEDRVVKKIRKAITKKVLDELEKLAKNdREKYEKFWKEFGPVLKEGLYE 377
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  396 DSQNRQKLAELLRFSSSTSGEdWTSFKEYVERMKEGQEDIYYITGESKKAVANSPFIEKCAKKGIEVLYLTDPIDEYMVQ 475
Cdd:PRK05218 378 DFANREKLAKLLRFASTHEGK-YVSLAEYVERMKEGQKKIYYITGDSREAAKNSPHLELFKKKGIEVLLLTDPIDEFWIS 456
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  476 QLKEFDGKKLVCVTKEGLK-LPETEEEKKKKEELKASFEALCKLMKDILGDKVEKVVVSDRLGDSPCCLVTGEYGWSSNM 554
Cdd:PRK05218 457 YLEEFDGKPFKSVARGDLDlGKEDEEEKEEKEEAEEEFKPLLERLKEALGDKVKDVRLSHRLTDSPACLVADEGDMSTQM 536
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  555 ERIMKAQalkdnsMAAYMVSKKTMEINPENSIVNELRKKAEANKADktlrDLVWLLFDISLLTSGFSLEEPSTFAGRIHR 634
Cdd:PRK05218 537 EKLLKAA------GQEVPESKPILEINPNHPLVKKLADEADEAKFK----DLAELLYDQALLAEGGSLEDPAAFVKRLNE 606
HtpG COG0326
Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, ...
1-634 0e+00

Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440095 [Multi-domain]  Cd Length: 616  Bit Score: 712.66  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   1 SNKEIFLRELISNASDALDKLRHISLTEPSVLDTERELCIRIIPDKVNKTLTLIDTGVAMTKADLINCLGTIARSGTKQF 80
Cdd:COG0326  25 SNKEIFLRELISNASDAIDKLRFLALTDPELKEEDGDLKIRIEVDKEAKTLTISDNGIGMTREEVIENLGTIAKSGTREF 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  81 MEMLQ--AGADVSLIGQFGVGFYSAYLVADRVVVTTKH--NDDEQYIWESAAGGSFTItldETGERLTRGTKIVLHMKED 156
Cdd:COG0326 105 LEKLKgdQKKDSDLIGQFGVGFYSAFMVADKVEVVTRSagEDAEAVRWESDGDGEYTI---EEAEKAERGTEITLHLKED 181
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 157 QLEYLEERKLKDLVKKHSEFIGYPISLyvekteekeveedeekkdeektdepkieevdedkekktKKVKEVTHEWELLNK 236
Cdd:COG0326 182 AEEFLEEWRLREIIKKYSDFIPVPIKM--------------------------------------EGEEEETEEDETINS 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 237 TKPLWTRDAKTVTKEEYASFYKALTNDWEEHLAVKHFSVEGNFEFKAILFAPKRAPFDLFEPKKKlNNIKLYVRRVFIMD 316
Cdd:COG0326 224 ATALWTRSKSEITDEEYKEFYKHLFHDFEDPLFWIHLNVEGPFEYTGLLYIPKKAPFDLYDRDRK-GGIKLYVKRVFIMD 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 317 NCEELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNLVKKCIEMFSEISEN-KEDWKSFYEAFGKNLKLGIHE 395
Cdd:COG0326 303 DAEDLLPEYLRFVRGVVDSPDLPLNVSREILQEDRQLKKIRKAITKKVLDELEKLAKNdREKYEKFWKEFGLVLKEGALE 382
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 396 DSQNRQKLAELLRFSSSTSGEdWTSFKEYVERMKEGQEDIYYITGESKKAVANSPFIEKCAKKGIEVLYLTDPIDEYMVQ 475
Cdd:COG0326 383 DFKNREKIADLLRFESTKEGG-YVTLAEYVERMKEGQKKIYYITGESREAAEQSPHLEIFKAKGIEVLLLTDPIDEFLIS 461
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841 476 QLKEFDGKKLVCVTKEGLKLPETEEEKKKKEELKAsFEALCKLMKDILGDKVEKVVVSDRLGDSPCCLVTGEYGWSSNME 555
Cdd:COG0326 462 HLEEFDGKKFKSVDSGDLDLDKLEEKKESEEEEEE-FKPLLERFKEALGDKVKDVRVSARLTDSPACLVADEGDMSRRME 540
                       570       580       590       600       610       620       630
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 25986841 556 RIMKAQalkDNSMAAymvSKKTMEINPENSIVnelrKKAEANKADKTLRDLVWLLFDISLLTSGFSLEEPSTFAGRIHR 634
Cdd:COG0326 541 KMLKAM---GQDMPE---AKPILEINPNHPLV----KKLAAEEDEELFKDLAELLYDQALLAEGGLLEDPAAFVKRLNK 609
PTZ00130 PTZ00130
heat shock protein 90; Provisional
1-629 7.67e-158

heat shock protein 90; Provisional


Pssm-ID: 185466 [Multi-domain]  Cd Length: 814  Bit Score: 473.76  E-value: 7.67e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841    1 SNKEIFLRELISNASDALDKLRHISLTEPSVLDTERELCIRIIPDKVNKTLTLIDTGVAMTKADLINCLGTIARSGTKQF 80
Cdd:PTZ00130  87 TQKEVFLRELISNAADALEKIRFLSLSDESVLGEEKKLEIRISANKEKNILSITDTGIGMTKEDLINNLGTIAKSGTSNF 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   81 MEML-QAGADVSLIGQFGVGFYSAYLVADRVVVTTKHNDDEQYIWESAAGGSFTITLDETGERLTRGTKIVLHMKEDQLE 159
Cdd:PTZ00130 167 LEAIsKSGGDMSLIGQFGVGFYSAFLVADKVIVYTKNNNDEQYIWESTADAKFTIYKDPRGSTLKRGTRISLHLKEDATN 246
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  160 YLEERKLKDLVKKHSEFIGYPISLYVEKTEEKEVEEDEEKKDEEKTDEPKIE-EVDEDKEKKTKKVKEVTHEWELLNKTK 238
Cdd:PTZ00130 247 LMNDKKLVDLISKYSQFIQYPIYLLHENVYTEEVLADIAKEMENDPNYDSVKvEETDDPNKKTRTVEKKVKKWKLMNEQK 326
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  239 PLWTRDAKTVTKEEYASFYKALTNDWEEHLAVKHFSVEGNFEFKAILFAPKRAPFDLFEPKKKLNNIKLYVRRVFIMDNC 318
Cdd:PTZ00130 327 PIWLRPPKELTDEDYKKFFSVLSGFNDEPLYHIHFFAEGEIEFKCLIYIPSRAPSINDHLFTKQNSIKLYVRRVLVADEF 406
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  319 EELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNLVKKCIEMFSEI----SENKED----------------- 377
Cdd:PTZ00130 407 VEFLPRYMSFVKGVVDSDDLPLNVSREQLQQNKILKAVSKRIVRKILDTFRTLykegKKNKETlraelaketdeekkkei 486
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  378 ---------WKSFYEAFGKNLKLGIHEDSQNRQKLAELLRFSSSTSGEDwTSFKEYVERMKEGQEDIYYITGESKKAVAN 448
Cdd:PTZ00130 487 qkkinepstYKLIYKEYRKYLKTGCYEDDINRNKIVKLLLFKTMLHPKS-ISLDTYIENMKPDQKFIYYASGDSYEYLSK 565
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  449 SPFIEKCAKKGIEVLYLTDPIDEYMVQQLKEFDGKKLVCVTKEGLKLPETEEEKKKKEELKASFEALCKLMKDILGDKVE 528
Cdd:PTZ00130 566 IPQLQIFKKKNIDVVFLTESVDESCVQRVQEYDGKKFKSIQKGEITFELTEDEKKKEEKVKKMYKALIDVISDTLRNQIF 645
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  529 KVVVSDRLGDSPCCLVTGEYGWSSNMERIMKAQALKDNSMAAyMVSKKTMEINPENSIVNELRKKAEANKADKTLRDLVW 608
Cdd:PTZ00130 646 KVEISRRLVDAPCAVVSTEWGLSGQMEKLMKINVNNSDQIKA-MSGQKILEINPDHPIMIDLLKRSVSNPKDSQLTESIK 724
                        650       660
                 ....*....|....*....|.
gi 25986841  609 LLFDISLLTSGFSLEEPSTFA 629
Cdd:PTZ00130 725 IIYQSAKLASGFDLEDTADLA 745
HATPase_Hsp90-like cd16927
Histidine kinase-like ATPase domain of human cytosolic Hsp90 and its homologs including ...
1-177 2.00e-99

Histidine kinase-like ATPase domain of human cytosolic Hsp90 and its homologs including Escherichia coli HtpG, and related domains; This family includes the histidine kinase-like ATPase (HATPase) domains of 90 kilodalton heat-shock protein (Hsp90) eukaryotic homologs including cytosolic Hsp90, mitochondrial TRAP1 (tumor necrosis factor receptor-associated protein 1), GRP94 (94 kDa glucose-regulated protein) of the endoplasmic reticulum (ER), and chloroplast Hsp90C. It also includes the bacterial homologs of Hsp90, known as HtpG (High temperature protein G). Hsp90 family of chaperones assist other proteins to fold correctly, stabilizes them against heat stress, and aids in protein degradation.


Pssm-ID: 340404 [Multi-domain]  Cd Length: 189  Bit Score: 301.36  E-value: 2.00e-99
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   1 SNKEIFLRELISNASDALDKLRHISLTEPSVLDTERELCIRIIPDKVNKTLTLIDTGVAMTKADLINCLGTIARSGTKQF 80
Cdd:cd16927  13 SNKEIFLRELISNASDALDKLRYLSLTDPSLLDDDPELEIRISPDKENRTLTISDTGIGMTKEELINNLGTIARSGTKAF 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  81 MEMLQAGA-DVSLIGQFGVGFYSAYLVADRVVVTTKHN-DDEQYIWESAAGGSFTITLDEtgERLTRGTKIVLHMKEDQL 158
Cdd:cd16927  93 LEALQEGAkDSDLIGQFGVGFYSAFMVADKVTVTTKSAgDDEGYRWESDGGGSYTIEEAE--GELGRGTKITLHLKEDAK 170
                       170
                ....*....|....*....
gi 25986841 159 EYLEERKLKDLVKKHSEFI 177
Cdd:cd16927 171 EFLEEARIKELVKKYSDFI 189
PRK14083 PRK14083
HSP90 family protein; Provisional
1-360 1.75e-26

HSP90 family protein; Provisional


Pssm-ID: 237603 [Multi-domain]  Cd Length: 601  Bit Score: 114.27  E-value: 1.75e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841    1 SNKEIFLRELISNASDALDKLRHISLTEPSVldterelcIRIIP-DKVNKTLTLIDTGVAMTKADLINCLGTIARSgTKQ 79
Cdd:PRK14083  22 SSPRVYVRELLQNAVDAITARRALDPTAPGR--------IRIELtDAGGGTLIVEDNGIGLTEEEVHEFLATIGRS-SKR 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841   80 FMEMLQAGADvsLIGQFGVGFYSAYLVADRVVVTTKHNDDEQYI-WESAAGGSFTITLDETgERLTRGTKIVLHMKEDQL 158
Cdd:PRK14083  93 DENLGFARND--FLGQFGIGLLSCFLVADEIVVVSRSAKDGPAVeWRGKADGTYSVRKLET-ERAEPGTTVYLRPRPDAE 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  159 EYLEERKLKDLVKKHSEFIGYPISLYVekteekeveedeekkdeektdepkieevdedkekktkkvkevthEWELLNKTK 238
Cdd:PRK14083 170 EWLERETVEELAKKYGSLLPVPIRVEG--------------------------------------------EKGGVNETP 205
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841  239 PLWTRD--AKTVTKEEYASFYKALtndweehlavkhfsvegnFEFkailfapkrAPFDLFE---PKKKLNNI-------- 305
Cdd:PRK14083 206 PPWTRDypDPETRREALLAYGEEL------------------LGF---------TPLDVIPldvPSGGLEGVayvlpyav 258
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 25986841  306 --------KLYVRRVFIMDNCEELIPEYLNFIKGIVDSEDLPLNISREHLQQNKIMKVIRKNL 360
Cdd:PRK14083 259 spaarrkhRVYLKRMLLSEEAENLLPDWAFFVRCVVNTDELRPTASREALYEDDALAAVREEL 321
HATPase_c smart00387
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
2-139 1.13e-07

Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.


Pssm-ID: 214643 [Multi-domain]  Cd Length: 111  Bit Score: 50.34  E-value: 1.13e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841      2 NKEIFLRELISNASDALDKLRHisltepsvldTERELCIRIIPDKVNKTLTLIDTGVAMTKADLinclgtiarsgTKQFM 81
Cdd:smart00387   1 GDPDRLRQVLSNLLDNAIKYTP----------EGGRITVTLERDGDHVEITVEDNGPGIPPEDL-----------EKIFE 59
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 25986841     82 EMLQAGADVSLIGQFGVGFYSAYLVADRVVVTTKHNDDEQyiwesaAGGSFTITLDET 139
Cdd:smart00387  60 PFFRTDKRSRKIGGTGLGLSIVKKLVELHGGEISVESEPG------GGTTFTITLPLE 111
HATPase_c pfam02518
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the ...
7-139 8.93e-04

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.


Pssm-ID: 460579 [Multi-domain]  Cd Length: 109  Bit Score: 39.27  E-value: 8.93e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841     7 LRELISNASDALDKLRHISLTepsvLDTERELCIRIipdkvnktltlIDTGVAMTKADLinclgtiARSGTKqFMEmlqa 86
Cdd:pfam02518  10 LSNLLDNALKHAAKAGEITVT----LSEGGELTLTV-----------EDNGIGIPPEDL-------PRIFEP-FST---- 62
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 25986841    87 gADVSLIGQFGVGFYsaylVADRVVvtTKHNDDEQYIWESAAGGSFTITLDET 139
Cdd:pfam02518  63 -ADKRGGGGTGLGLS----IVRKLV--ELLGGTITVESEPGGGTTVTLTLPLA 108
HATPase_c_3 pfam13589
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents, additionally, ...
4-121 5.58e-03

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.


Pssm-ID: 433332 [Multi-domain]  Cd Length: 135  Bit Score: 37.70  E-value: 5.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25986841     4 EIFLRELISNASDAldKLRHISLTepsvLDTERELCIRIipdkvnktlTLIDTGVAMTKADLINCLGtIARSGTKqfmem 83
Cdd:pfam13589   2 EGALAELIDNSIDA--DATNIKIE----VNKNRGGGTEI---------VIEDDGHGMSPEELINALR-LATSAKE----- 60
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 25986841    84 lqAGADVSLIGQFGVGFYSAYLVADR-VVVTTKHNDDEQ 121
Cdd:pfam13589  61 --AKRGSTDLGRYGIGLKLASLSLGAkLTVTSKKEGKSS 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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