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Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
415-605
1.89e-72
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 231.69
E-value: 1.89e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 415 ER ER L L R SKRH R G K SL K PPKKH - VVETFFG F DEE - SVDSET l S ET SYNTDRTD R TPATP E EDLD DAT A R EEA D LRF C QLT 492
Cdd:pfam16034 1 ER DK L I R ARKQ R R K EK K KKLRD m VVETFFG Y DEE a SVDSET - S SL SYNTDRTD S TPATP D EDLD EGV A A EEA E LRF R QLT 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 493 REYQALQRAYALLQEQ V GGTLDAEREA R TREQLQA D L L R C Q AK IEDLE KL L VE KGQDSKWVEEKQ L LIR T NQ D L L EKI YR 572
Cdd:pfam16034 80 REYQALQRAYALLQEQ S GGTLDAEREA K TREQLQA E L R R A Q SR IEDLE SA L AQ KGQDSKWVEEKQ A LIR R NQ E L V EKI RI 159
170 180 190
....*....|....*....|....*....|...
gi 38641276 573 L E M EE NQ LKNE M QDA K DQNELLEFR V LELE V R D 605
Cdd:pfam16034 160 M E Q EE GR LKNE I QDA R DQNELLEFR I LELE E R E 192
Smc super family
cl34174 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
24-607
6.79e-11
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
COG1196 :Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 65.34
E-value: 6.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 24 E EL R A K L TSIQIEFQQEKSKVGKLRERLQ EA K LE REQEQRRHTAYIS E LKAKLH EE KTK EL QALREGL i RQHEQ E A AR TA 103
Cdd:COG1196 223 K EL E A E L LLLKLRELEAELEELEAELEEL EA E LE ELEAELAELEAEL E ELRLEL EE LEL EL EEAQAEE - YELLA E L AR LE 301
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 104 KIKEGELQ R LQA tlnvlrdgaadkvktal L T E AR EE ARRAFDGERLR L QQEIL EL KAARKQA EEA lsncm QADKTK A ADL 183
Cdd:COG1196 302 QDIARLEE R RRE ----------------- L E E RL EE LEEELAELEEE L EELEE EL EELEEEL EEA ----- EEELEE A EAE 359
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 184 R A AYQAHQD E VHRIKR E C E RDIRR L MD E IKGKD R VILA L EKE L GVQAGQTQK LL LQK E A L D E Q L VQVK EA ERH hsspkre 263
Cdd:COG1196 360 L A EAEEALL E AEAELA E A E EELEE L AE E LLEAL R AAAE L AAQ L EELEEAEEA LL ERL E R L E E E L EELE EA LAE ------- 432
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 264 lppgigdmv ELMGVQDQHMDERDVRRFQLKIA E LNSVIRK L EDRNTLL A DERNEL L KRSR E TEVQLKPLVEKNKRMNKKN 343
Cdd:COG1196 433 --------- LEEEEEEEEEALEEAAEEEAELE E EEEALLE L LAELLEE A ALLEAA L AELL E ELAEAAARLLLLLEAEADY 503
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 344 E DL L QSIQRMEEKIKN -------- LTRENVEMK E KLSAQ A SLKRHTSLNDLSLTRDEQE IE F L RLQVLEQQHVIDDLSLE 415
Cdd:COG1196 504 E GF L EGVKAALLLAGL rglagava VLIGVEAAY E AALEA A LAAALQNIVVEDDEVAAAA IE Y L KAAKAGRATFLPLDKIR 583
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 416 RERL L RSKRH RG KSLKPPKKHVVETFFGFDEES V DSE TL SETSYNTD R TDR tpatpeedld DATAREEADL R FCQL T R E Y 495
Cdd:COG1196 584 ARAA L AAALA RG AIGAAVDLVASDLREADARYY V LGD TL LGRTLVAA R LEA ---------- ALRRAVTLAG R LREV T L E G 653
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 496 QALQRAYA L LQEQVGGT L D A ER EA RTREQLQ A DL L RCQAKIEDLEK L LV E KGQDSKWVE E KQL L IRTNQDLLEKIYRLEM 575
Cdd:COG1196 654 EGGSAGGS L TGGSRREL L A A LL EA EAELEEL A ER L AEEELELEEAL L AE E EEERELAEA E EER L EEELEEEALEEQLEAE 733
570 580 590
....*....|....*....|....*....|..
gi 38641276 576 E E NQ L KNEMQDAKDQN E LLEFRVL E LEVRDSI 607
Cdd:COG1196 734 R E EL L EELLEEEELLE E EALEELP E PPDLEEL 765
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
415-605
1.89e-72
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 231.69
E-value: 1.89e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 415 ER ER L L R SKRH R G K SL K PPKKH - VVETFFG F DEE - SVDSET l S ET SYNTDRTD R TPATP E EDLD DAT A R EEA D LRF C QLT 492
Cdd:pfam16034 1 ER DK L I R ARKQ R R K EK K KKLRD m VVETFFG Y DEE a SVDSET - S SL SYNTDRTD S TPATP D EDLD EGV A A EEA E LRF R QLT 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 493 REYQALQRAYALLQEQ V GGTLDAEREA R TREQLQA D L L R C Q AK IEDLE KL L VE KGQDSKWVEEKQ L LIR T NQ D L L EKI YR 572
Cdd:pfam16034 80 REYQALQRAYALLQEQ S GGTLDAEREA K TREQLQA E L R R A Q SR IEDLE SA L AQ KGQDSKWVEEKQ A LIR R NQ E L V EKI RI 159
170 180 190
....*....|....*....|....*....|...
gi 38641276 573 L E M EE NQ LKNE M QDA K DQNELLEFR V LELE V R D 605
Cdd:pfam16034 160 M E Q EE GR LKNE I QDA R DQNELLEFR I LELE E R E 192
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
24-607
6.79e-11
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 65.34
E-value: 6.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 24 E EL R A K L TSIQIEFQQEKSKVGKLRERLQ EA K LE REQEQRRHTAYIS E LKAKLH EE KTK EL QALREGL i RQHEQ E A AR TA 103
Cdd:COG1196 223 K EL E A E L LLLKLRELEAELEELEAELEEL EA E LE ELEAELAELEAEL E ELRLEL EE LEL EL EEAQAEE - YELLA E L AR LE 301
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 104 KIKEGELQ R LQA tlnvlrdgaadkvktal L T E AR EE ARRAFDGERLR L QQEIL EL KAARKQA EEA lsncm QADKTK A ADL 183
Cdd:COG1196 302 QDIARLEE R RRE ----------------- L E E RL EE LEEELAELEEE L EELEE EL EELEEEL EEA ----- EEELEE A EAE 359
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 184 R A AYQAHQD E VHRIKR E C E RDIRR L MD E IKGKD R VILA L EKE L GVQAGQTQK LL LQK E A L D E Q L VQVK EA ERH hsspkre 263
Cdd:COG1196 360 L A EAEEALL E AEAELA E A E EELEE L AE E LLEAL R AAAE L AAQ L EELEEAEEA LL ERL E R L E E E L EELE EA LAE ------- 432
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 264 lppgigdmv ELMGVQDQHMDERDVRRFQLKIA E LNSVIRK L EDRNTLL A DERNEL L KRSR E TEVQLKPLVEKNKRMNKKN 343
Cdd:COG1196 433 --------- LEEEEEEEEEALEEAAEEEAELE E EEEALLE L LAELLEE A ALLEAA L AELL E ELAEAAARLLLLLEAEADY 503
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 344 E DL L QSIQRMEEKIKN -------- LTRENVEMK E KLSAQ A SLKRHTSLNDLSLTRDEQE IE F L RLQVLEQQHVIDDLSLE 415
Cdd:COG1196 504 E GF L EGVKAALLLAGL rglagava VLIGVEAAY E AALEA A LAAALQNIVVEDDEVAAAA IE Y L KAAKAGRATFLPLDKIR 583
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 416 RERL L RSKRH RG KSLKPPKKHVVETFFGFDEES V DSE TL SETSYNTD R TDR tpatpeedld DATAREEADL R FCQL T R E Y 495
Cdd:COG1196 584 ARAA L AAALA RG AIGAAVDLVASDLREADARYY V LGD TL LGRTLVAA R LEA ---------- ALRRAVTLAG R LREV T L E G 653
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 496 QALQRAYA L LQEQVGGT L D A ER EA RTREQLQ A DL L RCQAKIEDLEK L LV E KGQDSKWVE E KQL L IRTNQDLLEKIYRLEM 575
Cdd:COG1196 654 EGGSAGGS L TGGSRREL L A A LL EA EAELEEL A ER L AEEELELEEAL L AE E EEERELAEA E EER L EEELEEEALEEQLEAE 733
570 580 590
....*....|....*....|....*....|..
gi 38641276 576 E E NQ L KNEMQDAKDQN E LLEFRVL E LEVRDSI 607
Cdd:COG1196 734 R E EL L EELLEEEELLE E EALEELP E PPDLEEL 765
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
6-363
9.60e-07
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 51.99
E-value: 9.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 6 R S KGEKP E MET D AVQMANEELRA K LTS I QI E FQ Q EKSKVG KL R ERL Q E AKLEREQEQRRHTAYI SELK aklhe E KTKELQ 85
Cdd:TIGR02169 694 Q S ELRRI E NRL D ELSQELSDASR K IGE I EK E IE Q LEQEEE KL K ERL E E LEEDLSSLEQEIENVK SELK ----- E LEARIE 768
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 86 A L R E G L IRQH E QEAART A KIKEGELQRL QA T L NV L RDGAADKVKTALLT E AREEAR ---- RAFDG E RLR LQ QEILE LK AA 161
Cdd:TIGR02169 769 E L E E D L HKLE E ALNDLE A RLSHSRIPEI QA E L SK L EEEVSRIEARLREI E QKLNRL tlek EYLEK E IQE LQ EQRID LK EQ 848
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 162 R K QA E EALS N cmqa DKT K AAD L RAAYQAHQDEV hrikrecerdi R R L MDEIKGKDRVILA LE KE L GVQAGQTQK L LL Q K E 241
Cdd:TIGR02169 849 I K SI E KEIE N ---- LNG K KEE L EEELEELEAAL ----------- R D L ESRLGDLKKERDE LE AQ L RELERKIEE L EA Q I E 913
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 242 ALDEQ L VQV K EAERHHSSPKR E LPPGI G DMV E lmg VQDQHMDER DV rrf Q LKIAELNSV IR K LE DR N T L LAD E RN E L LKR 321
Cdd:TIGR02169 914 KKRKR L SEL K AKLEALEEELS E IEDPK G EDE E --- IPEEELSLE DV --- Q AELQRVEEE IR A LE PV N M L AIQ E YE E V LKR 987
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 38641276 322 sretevq L KP L V EK NKRMNKKNEDL L QS I QRM E E K IKNLTR E 363
Cdd:TIGR02169 988 ------- L DE L K EK RAKLEEERKAI L ER I EEY E K K KREVFM E 1022
PTZ00121
PTZ00121 MAEBL; Provisional
38-246
2.94e-05
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 47.44
E-value: 2.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 38 QQ E KS K VGK LR ERLQEA K L E REQEQRRHTA Y IS E L K A K LH E E K TK E LQALREGLIRQH E Q E AARTAKI K EG E LQRLQATL 117
Cdd:PTZ00121 1571 KA E ED K NMA LR KAEEAK K A E EARIEEVMKL Y EE E K K M K AE E A K KA E EAKIKAEELKKA E E E KKKVEQL K KK E AEEKKKAE 1650
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 118 NVLRDGAAD K V K T A LLTEAR EE ARRAFDGERLRLQQ E ILELK A AR K Q AEEA ----- L SNCMQAD K T KA AD L RA A YQAHQD 192
Cdd:PTZ00121 1651 ELKKAEEEN K I K A A EEAKKA EE DKKKAEEAKKAEED E KKAAE A LK K E AEEA kkaee L KKKEAEE K K KA EE L KK A EEENKI 1730
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 38641276 193 EVHRI K R E C E R D IRRL ---- M DE IKG K DRVI L AL E K E LGVQAGQTQ K LLLQK E A LDE Q 246
Cdd:PTZ00121 1731 KAEEA K K E A E E D KKKA eeak K DE EEK K KIAH L KK E E E KKAEEIRKE K EAVIE E E LDE E 1788
DUF5401
pfam17380 Family of unknown function (DUF5401); This is a family of unknown function found in ...
8-225
1.61e-03
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain]
Cd Length: 722
Bit Score: 41.65
E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 8 K G E KPEMETDAVQ M ANEEL R a K L TSI Q I E F QQ EKSK V GKLR E RLQEA K LER E QE QR R htay I SEL K AKLHEEKTKELQ A L 87
Cdd:pfam17380 359 K R E LERIRQEEIA M EISRM R - E L ERL Q M E R QQ KNER V RQEL E AARKV K ILE E ER QR K ---- I QQQ K VEMEQIRAEQEE A R 433
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 88 REGLI R QH E QE A ARTAKIKEG E LQ R L Q ATLNVLRDGAAD K V K TAL L TEAREEAR RA FDGE R LR L QQ E IL E L K A A --- RKQ 164
Cdd:pfam17380 434 QREVR R LE E ER A REMERVRLE E QE R Q Q QVERLRQQEEER K R K KLE L EKEKRDRK RA EEQR R KI L EK E LE E R K Q A mie EER 513
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 38641276 165 AEEA L SNC M QADKTKAADLRAAYQ A HQDEVHRIKR E CE R D I RRL M DEIKGKDRVIL A L E K E 225
Cdd:pfam17380 514 KRKL L EKE M EERQKAIYEEERRRE A EEERRKQQEM E ER R R I QEQ M RKATEERSRLE A M E R E 574
PspC_subgroup_1
NF033838 pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
23-374
6.15e-03
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain]
Cd Length: 684
Bit Score: 39.61
E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 23 N EE L RA KL TS I QI E F ------ QQ EKS KV --- G K LRER L QE A KLEREQEQRRHTAYIS E LKA K L h EE KT K ELQALR E GLI R 93
Cdd:NF033838 86 N VA L NK KL SD I KT E Y lyelnv LK EKS EA elt S K TKKE L DA A FEQFKKDTLEPGKKVA E ATK K V - EE AE K KAKDQK E EDR R 164
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 94 QHEQEAAR T --------- AKI K EG EL QRLQATLNVL RD ga AD K V K T A llt E A RE E ARR A fdg E RL RL Q qeil EL K AA R KQ 164
Cdd:NF033838 165 NYPTNTYK T leleiaesd VEV K KA EL ELVKEEAKEP RD -- EE K I K Q A --- K A KV E SKK A --- E AT RL E ---- KI K TD R EK 232
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 165 AEE ALSNCMQ A DKTK A ADLRA A YQAHQDEVH R I KR EC ---------- E R D IRRLMDEIKGKDRVILA L EK E LG V QAGQTQ 234
Cdd:NF033838 233 AEE EAKRRAD A KLKE A VEKNV A TSEQDKPKR R A KR GV lgepatpdkk E N D AKSSDSSVGEETLPSPS L KP E KK V AEAEKK 312
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 235 KLLLQ K E A L D E qlvqv KE AE R hhsspk R EL P PGIGDMV EL mgvqdqhmderdvrrfql K IAE LNSVIRKL E DR nt L LAD E 314
Cdd:NF033838 313 VEEAK K K A K D Q ----- KE ED R ------ R NY P TNTYKTL EL ------------------ E IAE SDVKVKEA E LE -- L VKE E 361
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 315 RN E ll K R SR E TEV Q L K PL VE KN K RMNKKN E DLLQSIQRM EE KI K NLTR E NVEM KEK LSA Q 374
Cdd:NF033838 362 AK E -- P R NE E KIK Q A K AK VE SK K AEATRL E KIKTDRKKA EE EA K RKAA E EDKV KEK PAE Q 419
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
415-605
1.89e-72
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 231.69
E-value: 1.89e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 415 ER ER L L R SKRH R G K SL K PPKKH - VVETFFG F DEE - SVDSET l S ET SYNTDRTD R TPATP E EDLD DAT A R EEA D LRF C QLT 492
Cdd:pfam16034 1 ER DK L I R ARKQ R R K EK K KKLRD m VVETFFG Y DEE a SVDSET - S SL SYNTDRTD S TPATP D EDLD EGV A A EEA E LRF R QLT 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 493 REYQALQRAYALLQEQ V GGTLDAEREA R TREQLQA D L L R C Q AK IEDLE KL L VE KGQDSKWVEEKQ L LIR T NQ D L L EKI YR 572
Cdd:pfam16034 80 REYQALQRAYALLQEQ S GGTLDAEREA K TREQLQA E L R R A Q SR IEDLE SA L AQ KGQDSKWVEEKQ A LIR R NQ E L V EKI RI 159
170 180 190
....*....|....*....|....*....|...
gi 38641276 573 L E M EE NQ LKNE M QDA K DQNELLEFR V LELE V R D 605
Cdd:pfam16034 160 M E Q EE GR LKNE I QDA R DQNELLEFR I LELE E R E 192
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
24-607
6.79e-11
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 65.34
E-value: 6.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 24 E EL R A K L TSIQIEFQQEKSKVGKLRERLQ EA K LE REQEQRRHTAYIS E LKAKLH EE KTK EL QALREGL i RQHEQ E A AR TA 103
Cdd:COG1196 223 K EL E A E L LLLKLRELEAELEELEAELEEL EA E LE ELEAELAELEAEL E ELRLEL EE LEL EL EEAQAEE - YELLA E L AR LE 301
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 104 KIKEGELQ R LQA tlnvlrdgaadkvktal L T E AR EE ARRAFDGERLR L QQEIL EL KAARKQA EEA lsncm QADKTK A ADL 183
Cdd:COG1196 302 QDIARLEE R RRE ----------------- L E E RL EE LEEELAELEEE L EELEE EL EELEEEL EEA ----- EEELEE A EAE 359
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 184 R A AYQAHQD E VHRIKR E C E RDIRR L MD E IKGKD R VILA L EKE L GVQAGQTQK LL LQK E A L D E Q L VQVK EA ERH hsspkre 263
Cdd:COG1196 360 L A EAEEALL E AEAELA E A E EELEE L AE E LLEAL R AAAE L AAQ L EELEEAEEA LL ERL E R L E E E L EELE EA LAE ------- 432
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 264 lppgigdmv ELMGVQDQHMDERDVRRFQLKIA E LNSVIRK L EDRNTLL A DERNEL L KRSR E TEVQLKPLVEKNKRMNKKN 343
Cdd:COG1196 433 --------- LEEEEEEEEEALEEAAEEEAELE E EEEALLE L LAELLEE A ALLEAA L AELL E ELAEAAARLLLLLEAEADY 503
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 344 E DL L QSIQRMEEKIKN -------- LTRENVEMK E KLSAQ A SLKRHTSLNDLSLTRDEQE IE F L RLQVLEQQHVIDDLSLE 415
Cdd:COG1196 504 E GF L EGVKAALLLAGL rglagava VLIGVEAAY E AALEA A LAAALQNIVVEDDEVAAAA IE Y L KAAKAGRATFLPLDKIR 583
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 416 RERL L RSKRH RG KSLKPPKKHVVETFFGFDEES V DSE TL SETSYNTD R TDR tpatpeedld DATAREEADL R FCQL T R E Y 495
Cdd:COG1196 584 ARAA L AAALA RG AIGAAVDLVASDLREADARYY V LGD TL LGRTLVAA R LEA ---------- ALRRAVTLAG R LREV T L E G 653
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 496 QALQRAYA L LQEQVGGT L D A ER EA RTREQLQ A DL L RCQAKIEDLEK L LV E KGQDSKWVE E KQL L IRTNQDLLEKIYRLEM 575
Cdd:COG1196 654 EGGSAGGS L TGGSRREL L A A LL EA EAELEEL A ER L AEEELELEEAL L AE E EEERELAEA E EER L EEELEEEALEEQLEAE 733
570 580 590
....*....|....*....|....*....|..
gi 38641276 576 E E NQ L KNEMQDAKDQN E LLEFRVL E LEVRDSI 607
Cdd:COG1196 734 R E EL L EELLEEEELLE E EALEELP E PPDLEEL 765
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
51-580
5.95e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 56.10
E-value: 5.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 51 L Q E AKL E R E Q E QRRHTAYIS E LKAKLH E EKTK EL Q A LR E G L IRQHEQEA A RTAKIKE g EL QR L QAT L NVLRDGAADKVKT 130
Cdd:COG1196 218 L K E ELK E L E A E LLLLKLREL E AELEEL E AELE EL E A EL E E L EAELAELE A ELEELRL - EL EE L ELE L EEAQAEEYELLAE 296
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 131 ALLT E AR ---- EE A RR AFDGERLR L QQ E IL EL KAARKQA EE A L SNCMQADKTKAAD L RA A YQAHQDEVHRIKRE c E RDIR 206
Cdd:COG1196 297 LARL E QD iarl EE R RR ELEERLEE L EE E LA EL EEELEEL EE E L EELEEELEEAEEE L EE A EAELAEAEEALLEA - E AELA 375
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 207 RLMD E IKGKDRVI L ALEKELGVQ A G Q TQK L LLQK EAL D E Q L VQVK E AERHHSSPKR E lppgigdmv ELMGVQDQHMDERD 286
Cdd:COG1196 376 EAEE E LEELAEEL L EALRAAAEL A A Q LEE L EEAE EAL L E R L ERLE E ELEELEEALA E --------- LEEEEEEEEEALEE 446
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 287 VRRFQLKIA E LNSVIRK L EDRNTLL A DERNEL L KRSR E TEVQLKPLVEKNKRMNKKN E DL L QSIQRMEEKIKN ------- 359
Cdd:COG1196 447 AAEEEAELE E EEEALLE L LAELLEE A ALLEAA L AELL E ELAEAAARLLLLLEAEADY E GF L EGVKAALLLAGL rglagav 526
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 360 - LTRENVEMK E KLSAQ A SLKRHTSLNDLSLTRDEQE IE F L RLQVLEQQHVIDDLSLERERL L RSKRH RG KSLKPPKKHVV 438
Cdd:COG1196 527 a VLIGVEAAY E AALEA A LAAALQNIVVEDDEVAAAA IE Y L KAAKAGRATFLPLDKIRARAA L AAALA RG AIGAAVDLVAS 606
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 439 ETFFGFDEES V DSE TL SETSYNTD R TD --- R TPA T PEED L DDA T A ------------------- REEADLRFCQ L TREYQ 496
Cdd:COG1196 607 DLREADARYY V LGD TL LGRTLVAA R LE aal R RAV T LAGR L REV T L egeggsaggsltggsrrel LAALLEAEAE L EELAE 686
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 497 A L QRAYAL L Q E QVGGTLDA ERE ARTR E QLQADLLRCQAKI E DLEKLLV E KGQDSKWV EE KQ L LIRTNQD L L E -------- 568
Cdd:COG1196 687 R L AEEELE L E E ALLAEEEE ERE LAEA E EERLEEELEEEAL E EQLEAER E ELLEELLE EE EL L EEEALEE L P E ppdleele 766
570
....*....|...
gi 38641276 569 - KIY RLE M E ENQ L 580
Cdd:COG1196 767 r ELE RLE R E IEA L 779
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
15-541
4.64e-07
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 53.02
E-value: 4.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 15 ETDAVQM A NE E LRAK L TSIQIEF Q QEKSKVGKL RE RLQE - AK LE R E QEQRRHTAYIS E LKAKLH EE KTK E LQALR E GLIR 93
Cdd:COG1196 279 LELELEE A QA E EYEL L AELARLE Q DIARLEERR RE LEER l EE LE E E LAELEEELEEL E EELEEL EE ELE E AEEEL E EAEA 358
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 94 QHEQEAARTAKIKEGELQRLQATLNVLRDGAADKVKT A L L TEAR EE ARR A fdge RLR L QQEILE L KAARKQA EEAL sncm 173
Cdd:COG1196 359 ELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA A E L AAQL EE LEE A ---- EEA L LERLER L EEELEEL EEAL ---- 430
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 174 QADKTKAADLRA A YQAHQD E VHRIKR E C E RDIRR L MDEIKGKDRVIL AL EKE L GVQ A GQTQK LLL QK EA LDEQLVQVKEA 253
Cdd:COG1196 431 AELEEEEEEEEE A LEEAAE E EAELEE E E E ALLEL L AELLEEAALLEA AL AEL L EEL A EAAAR LLL LL EA EADYEGFLEGV 510
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 254 ERHHSSPKRELPP G IGDMVELMGVQDQHMD E rdvrrfqlki A E L NSVIRKLEDRNTLL A DERN E L LK RSRETEVQLK PL v 333
Cdd:COG1196 511 KAALLLAGLRGLA G AVAVLIGVEAAYEAAL E ---------- A A L AAALQNIVVEDDEV A AAAI E Y LK AAKAGRATFL PL - 579
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 334 ek N K RMNKKNEDLLQSIQRMEEKIKNLTRENV E MKEKLSAQASLKRHTS L NDLS L TRDEQEIEF L RLQVL E QQHVIDDL S 413
Cdd:COG1196 580 -- D K IRARAALAAALARGAIGAAVDLVASDLR E ADARYYVLGDTLLGRT L VAAR L EAALRRAVT L AGRLR E VTLEGEGG S 657
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 414 LERERLLR S K R HRGKS L KPPKKHVV E tffg FD E ESVDS E TLS E TSYNTDRTDRTPATPE E DLDDATAR EE AD L RFCQLTR 493
Cdd:COG1196 658 AGGSLTGG S R R ELLAA L LEAEAELE E ---- LA E RLAEE E LEL E EALLAEEEEERELAEA E EERLEEEL EE EA L EEQLEAE 733
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 38641276 494 EYQA L QRAYALLQEQVGGT L DAER E ARTR E Q L QAD L L R CQAK IE D L EK 541
Cdd:COG1196 734 REEL L EELLEEEELLEEEA L EELP E PPDL E E L ERE L E R LERE IE A L GP 781
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
6-363
9.60e-07
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 51.99
E-value: 9.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 6 R S KGEKP E MET D AVQMANEELRA K LTS I QI E FQ Q EKSKVG KL R ERL Q E AKLEREQEQRRHTAYI SELK aklhe E KTKELQ 85
Cdd:TIGR02169 694 Q S ELRRI E NRL D ELSQELSDASR K IGE I EK E IE Q LEQEEE KL K ERL E E LEEDLSSLEQEIENVK SELK ----- E LEARIE 768
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 86 A L R E G L IRQH E QEAART A KIKEGELQRL QA T L NV L RDGAADKVKTALLT E AREEAR ---- RAFDG E RLR LQ QEILE LK AA 161
Cdd:TIGR02169 769 E L E E D L HKLE E ALNDLE A RLSHSRIPEI QA E L SK L EEEVSRIEARLREI E QKLNRL tlek EYLEK E IQE LQ EQRID LK EQ 848
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 162 R K QA E EALS N cmqa DKT K AAD L RAAYQAHQDEV hrikrecerdi R R L MDEIKGKDRVILA LE KE L GVQAGQTQK L LL Q K E 241
Cdd:TIGR02169 849 I K SI E KEIE N ---- LNG K KEE L EEELEELEAAL ----------- R D L ESRLGDLKKERDE LE AQ L RELERKIEE L EA Q I E 913
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 242 ALDEQ L VQV K EAERHHSSPKR E LPPGI G DMV E lmg VQDQHMDER DV rrf Q LKIAELNSV IR K LE DR N T L LAD E RN E L LKR 321
Cdd:TIGR02169 914 KKRKR L SEL K AKLEALEEELS E IEDPK G EDE E --- IPEEELSLE DV --- Q AELQRVEEE IR A LE PV N M L AIQ E YE E V LKR 987
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 38641276 322 sretevq L KP L V EK NKRMNKKNEDL L QS I QRM E E K IKNLTR E 363
Cdd:TIGR02169 988 ------- L DE L K EK RAKLEEERKAI L ER I EEY E K K KREVFM E 1022
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
56-363
3.71e-06
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 50.44
E-value: 3.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 56 LER EQ E QRRHTAY I S EL KA K LH E e KT K E L QA LR EG L ir QHEQ E AARTAKIKEG EL Q R L qatlnv LRDGAA D KVKTALLT E 135
Cdd:TIGR02168 673 LER RR E IEELEEK I E EL EE K IA E - LE K A L AE LR KE L -- EELE E ELEQLRKELE EL S R Q ------ ISALRK D LARLEAEV E 743
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 136 AR EE ARRAFDG E RLR L QQ EI L EL KAARKQ AEE A L sncm QADKTKAAD L R A AYQAHQD E V --- HRIKR E CERDIRR L MD E I 212
Cdd:TIGR02168 744 QL EE RIAQLSK E LTE L EA EI E EL EERLEE AEE E L ---- AEAEAEIEE L E A QIEQLKE E L kal REALD E LRAELTL L NE E A 819
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 213 KGKDRVILA LE KELGVQAGQTQK L LL Q K E A L D E QLVQVKEAERHHSSPKR EL PPGIGDMVELMGVQDQHMDERDVRRFQ L 292
Cdd:TIGR02168 820 ANLRERLES LE RRIAATERRLED L EE Q I E E L S E DIESLAAEIEELEELIE EL ESELEALLNERASLEEALALLRSELEE L 899
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38641276 293 -- KIA EL N S VIRK L EDRNTL L ADERNE L LK R SRET EV QLKP L V E knk R MNKKNEDL L QSIQRM E E KI KNLTR E 363
Cdd:TIGR02168 900 se ELR EL E S KRSE L RRELEE L REKLAQ L EL R LEGL EV RIDN L Q E --- R LSEEYSLT L EEAEAL E N KI EDDEE E 969
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
18-255
1.81e-05
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 47.45
E-value: 1.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 18 A VQM A NE E LR A K L TSI Q I E FQQEKSKVGK L RERLQEAKLEREQEQ RR htay I SE L KAKLHE ek TKELQ A LR E GLIRQH E Q 97
Cdd:COG4942 17 A QAD A AA E AE A E L EQL Q Q E IAELEKELAA L KKEEKALLKQLAALE RR ---- I AA L ARRIRA -- LEQEL A AL E AELAEL E K 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 98 E A A RTAKIK E GELQR L QAT L NV L - R D G AADKVKTA L LT E AREE A R R afdge RL RLQQEILE lk A A R K QAEE alsnc MQ AD 176
Cdd:COG4942 91 E I A ELRAEL E AQKEE L AEL L RA L y R L G RQPPLALL L SP E DFLD A V R ----- RL QYLKYLAP -- A R R E QAEE ----- LR AD 158
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 38641276 177 KTKA A D LRA AYQ A HQD E VHRIKR E C E RDIRR L MDEIKGKDRVILA LEKEL GVQ A GQTQK L LLQK E A L DEQLVQVKEAER 255
Cdd:COG4942 159 LAEL A A LRA ELE A ERA E LEALLA E L E EERAA L EALKAERQKLLAR LEKEL AEL A AELAE L QQEA E E L EALIARLEAEAA 237
PTZ00121
PTZ00121 MAEBL; Provisional
38-246
2.94e-05
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 47.44
E-value: 2.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 38 QQ E KS K VGK LR ERLQEA K L E REQEQRRHTA Y IS E L K A K LH E E K TK E LQALREGLIRQH E Q E AARTAKI K EG E LQRLQATL 117
Cdd:PTZ00121 1571 KA E ED K NMA LR KAEEAK K A E EARIEEVMKL Y EE E K K M K AE E A K KA E EAKIKAEELKKA E E E KKKVEQL K KK E AEEKKKAE 1650
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 118 NVLRDGAAD K V K T A LLTEAR EE ARRAFDGERLRLQQ E ILELK A AR K Q AEEA ----- L SNCMQAD K T KA AD L RA A YQAHQD 192
Cdd:PTZ00121 1651 ELKKAEEEN K I K A A EEAKKA EE DKKKAEEAKKAEED E KKAAE A LK K E AEEA kkaee L KKKEAEE K K KA EE L KK A EEENKI 1730
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 38641276 193 EVHRI K R E C E R D IRRL ---- M DE IKG K DRVI L AL E K E LGVQAGQTQ K LLLQK E A LDE Q 246
Cdd:PTZ00121 1731 KAEEA K K E A E E D KKKA eeak K DE EEK K KIAH L KK E E E KKAEEIRKE K EAVIE E E LDE E 1788
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
13-363
8.01e-05
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 45.82
E-value: 8.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 13 E M E TDAVQMAN EEL RAKLTSIQIEFQQEKSK V GK L R ER LQEAKL E REQEQRRHTAYISE L ----- KAKLH E EKTK EL Q A L 87
Cdd:TIGR02168 711 E E E LEQLRKEL EEL SRQISALRKDLARLEAE V EQ L E ER IAQLSK E LTELEAEIEELEER L eeaee ELAEA E AEIE EL E A Q 790
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 88 R E G L IRQHEQE a ARTAKIKEG EL QR L QATLNV LR DGAADKVKTALL TE A R E E ARRA fdg ERLR L QQE I LE L K A ARKQA EE 167
Cdd:TIGR02168 791 I E Q L KEELKAL - REALDELRA EL TL L NEEAAN LR ERLESLERRIAA TE R R L E DLEE --- QIEE L SED I ES L A A EIEEL EE 866
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 168 ALSN c MQADKTKAADL RA AYQAHQDEV hrikrec ERDIRR L MD E IKGKDRVILA L EK EL GVQAGQTQK L L L QK E A L DEQL 247
Cdd:TIGR02168 867 LIEE - LESELEALLNE RA SLEEALALL ------- RSELEE L SE E LRELESKRSE L RR EL EELREKLAQ L E L RL E G L EVRI 938
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 248 VQVK E AERHHS S PKR E LPPGIGDMV E L mgvq D QHMDE R DVR R FQL KI A EL NS V irkledr N TLLAD E RN EL LK R SRETEV 327
Cdd:TIGR02168 939 DNLQ E RLSEEY S LTL E EAEALENKI E D ---- D EEEAR R RLK R LEN KI K EL GP V ------- N LAAIE E YE EL KE R YDFLTA 1007
330 340 350
....*....|....*....|....*....|....*.
gi 38641276 328 Q LKP L veknkrm NKKN E D L LQS I QRMEEKIKNLTRE 363
Cdd:TIGR02168 1008 Q KED L ------- TEAK E T L EEA I EEIDREARERFKD 1036
COG2433
COG2433 Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
186-369
1.02e-03
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain]
Cd Length: 644
Bit Score: 42.15
E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 186 AY Q A HQDEVH R IKRECER D IR R lm DE I K gkdrvilaleke LG V QA G QTQKLL L QKEALD E QLVQVK EAER HHSSPK REL P 265
Cdd:COG2433 344 AY D A YKNKFE R VEKKVPP D VD R -- DE V K ------------ AR V IR G LSIEEA L EELIEK E LPEEEP EAER EKEHEE REL T 409
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 266 PGIGDMVE L MGVQDQHMD E rd V RRFQLKIA E LNSV I RK LE DRNTLLAD E RNELLKRS RE T evqlkplvekn K R MNKKN E D 345
Cdd:COG2433 410 EEEEEIRR L EEQVERLEA E -- V EELEAELE E KDER I ER LE RELSEARS E ERREIRKD RE I ----------- S R LDREI E R 476
170 180
....*....|....*....|....
gi 38641276 346 L LQSIQRME E K I KN L T R ENVEM KE 369
Cdd:COG2433 477 L ERELEEER E R I EE L K R KLERL KE 500
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
27-213
1.26e-03
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 42.21
E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 27 RAKL TSIQI E FQQEKSKVGKLR ERL QEAKL E REQE Q R R HT A YISELKAKLH E EKTKELQALREG L IRQH E QEA A RTAKIK 106
Cdd:COG4913 609 RAKL AALEA E LAELEEELAEAE ERL EALEA E LDAL Q E R RE A LQRLAEYSWD E IDVASAEREIAE L EAEL E RLD A SSDDLA 688
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 107 -- E GE L QR L Q A T L NV L RDGAAD - K VKTAL L TEAR E E A RRAF D GERL RL QQ - E I L ELKAA R KQA EE ALSN cm QADKTKAAD 182
Cdd:COG4913 689 al E EQ L EE L E A E L EE L EEELDE l K GEIGR L EKEL E Q A EEEL D ELQD RL EA a E D L ARLEL R ALL EE RFAA -- ALGDAVERE 766
170 180 190
....*....|....*....|....*....|.
gi 38641276 183 LR AAYQAHQ D EVHRIKREC E RDIR R L M DEIK 213
Cdd:COG4913 767 LR ENLEERI D ALRARLNRA E EELE R A M RAFN 797
PRK10929
PRK10929 putative mechanosensitive channel protein; Provisional
28-253
1.28e-03
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain]
Cd Length: 1109
Bit Score: 41.96
E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 28 A K LT SI Q I E FQQE K SK V GK L R er L QEAKLERE QE QR R HTA yis EL KA K LHEEKTKE LQALR EG L IR Q HEQ EA ---- AR T A 103
Cdd:PRK10929 173 A Q LT AL Q A E SAAL K AL V DE L E -- L AQLSANNR QE LA R LRS --- EL AK K RSQQLDAY LQALR NQ L NS Q RQR EA eral ES T E 247
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 104 KIK E -- G E L ---------------------- QR LQATLNVL R DG A AD -- K V KT AL L T e A RE EARRAFD ---- GE R LR L Q - 152
Cdd:PRK10929 248 LLA E qs G D L pksivaqfkinrelsqalnqqa QR MDLIASQQ R QA A SQ tl Q V RQ AL N T - L RE QSQWLGV snal GE A LR A Q v 326
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 153 ------------- Q E ILE L KAA R KQA E EA L SNCM Q ADKTKA AD --- L R A AYQAHQ D EVH R IK RE C erdirr L MDEIK G K D 216
Cdd:PRK10929 327 arlpempkpqqld T E MAQ L RVQ R LRY E DL L NKQP Q LRQIRQ AD gqp L T A EQNRIL D AQL R TQ RE L ------ L NSLLS G G D 400
250 260 270
....*....|....*....|....*....|....*..
gi 38641276 217 RV IL A L E K e L G V QAG Q tqklllqkea L DEQ L VQ V K EA 253
Cdd:PRK10929 401 TL IL E L T K - L K V ANS Q ---------- L EDA L KE V N EA 426
DUF5401
pfam17380 Family of unknown function (DUF5401); This is a family of unknown function found in ...
8-225
1.61e-03
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain]
Cd Length: 722
Bit Score: 41.65
E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 8 K G E KPEMETDAVQ M ANEEL R a K L TSI Q I E F QQ EKSK V GKLR E RLQEA K LER E QE QR R htay I SEL K AKLHEEKTKELQ A L 87
Cdd:pfam17380 359 K R E LERIRQEEIA M EISRM R - E L ERL Q M E R QQ KNER V RQEL E AARKV K ILE E ER QR K ---- I QQQ K VEMEQIRAEQEE A R 433
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 88 REGLI R QH E QE A ARTAKIKEG E LQ R L Q ATLNVLRDGAAD K V K TAL L TEAREEAR RA FDGE R LR L QQ E IL E L K A A --- RKQ 164
Cdd:pfam17380 434 QREVR R LE E ER A REMERVRLE E QE R Q Q QVERLRQQEEER K R K KLE L EKEKRDRK RA EEQR R KI L EK E LE E R K Q A mie EER 513
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 38641276 165 AEEA L SNC M QADKTKAADLRAAYQ A HQDEVHRIKR E CE R D I RRL M DEIKGKDRVIL A L E K E 225
Cdd:pfam17380 514 KRKL L EKE M EERQKAIYEEERRRE A EEERRKQQEM E ER R R I QEQ M RKATEERSRLE A M E R E 574
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
13-420
2.41e-03
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 41.08
E-value: 2.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 13 E M E TDAVQMANE E LRAKLTSIQIEFQQEKSKVGK L R ERL QEAKL E R E QEQR rhtayiselkaklheektk E L QA L R E GLI 92
Cdd:COG1196 378 E E E LEELAEELL E ALRAAAELAAQLEELEEAEEA L L ERL ERLEE E L E ELEE ------------------- A L AE L E E EEE 438
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 93 RQH E QEAARTAKIK E G E LQRLQATLNVLRDGAA dkvktall TEAR E E A RRAFDG E RLRLQQEI L E L KA A RKQA E EA L snc 172
Cdd:COG1196 439 EEE E ALEEAAEEEA E L E EEEEALLELLAELLEE -------- AALL E A A LAELLE E LAEAAARL L L L LE A EADY E GF L --- 507
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 173 mqadktk AADLR A AYQ A HQDEVHRIKRECERDIRRLMDEIKGKDRVI L ALEKELGVQAGQTQKLL L QKEALDEQLVQVKE 252
Cdd:COG1196 508 ------- EGVKA A LLL A GLRGLAGAVAVLIGVEAAYEAALEAALAAA L QNIVVEDDEVAAAAIEY L KAAKAGRATFLPLD 580
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 253 AE R HHSSPKRE L PP G IGDMVELMGVQ D QHMDERDVRRFQLKIAELNS V IRK LE DRNTLLADERNE L LKRSR E T E VQLKPL 332
Cdd:COG1196 581 KI R ARAALAAA L AR G AIGAAVDLVAS D LREADARYYVLGDTLLGRTL V AAR LE AALRRAVTLAGR L REVTL E G E GGSAGG 660
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 333 VEKNKRMNKKNED LL QSIQRM EE KIKN L TR E NV E MK E K L S A QASLK R HTSLNDLSLTRD E Q E I E F L RL Q VLEQQHVIDDL 412
Cdd:COG1196 661 SLTGGSRRELLAA LL EAEAEL EE LAER L AE E EL E LE E A L L A EEEEE R ELAEAEEERLEE E L E E E A L EE Q LEAEREELLEE 740
....*...
gi 38641276 413 S LE R E R LL 420
Cdd:COG1196 741 L LE E E E LL 748
COG2433
COG2433 Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
297-428
2.53e-03
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain]
Cd Length: 644
Bit Score: 41.00
E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 297 LNSVIRK L EDR nt L L AD E RN E LLKRSRET E VQ L KPLV E KNK R MNKKN E D L LQSIQRM E EKIKNLTRENVEMKEK LS AQA S 376
Cdd:COG2433 378 IEEALEE L IEK -- E L PE E EP E AEREKEHE E RE L TEEE E EIR R LEEQV E R L EAEVEEL E AELEEKDERIERLERE LS EAR S 455
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 38641276 377 LK R HTSLN D LSLT R DEQ EIE F L RLQVL E QQHV I DD L SLER ERL -- L RSKR H R G K 428
Cdd:COG2433 456 EE R REIRK D REIS R LDR EIE R L ERELE E ERER I EE L KRKL ERL ke L WKLE H S G E 509
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
22-169
3.36e-03
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 40.67
E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 22 AN E E LRA K L TS -- I Q IEFQQEKSKVGK LR E --- RL QEAKLER E QEQRRHTAYIS EL K A KLHEEKTKE L QA L RE g L I RQH E 96
Cdd:COG4913 273 EL E Y LRA A L RL wf A Q RRLELLEAELEE LR A ela RL EAELERL E ARLDALREELD EL E A QIRGNGGDR L EQ L ER - E I ERL E 351
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 38641276 97 Q E AAR taki K E GELQ RL Q A T L NV L rd G AADKVKTALLTEA R E EA RR --- A FDG E RLR L QQEIL E LK AA RKQAEEA L 169
Cdd:COG4913 352 R E LEE ---- R E RRRA RL E A L L AA L -- G LPLPASAEEFAAL R A EA AA lle A LEE E LEA L EEALA E AE AA LRDLRRE L 421
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
24-199
4.61e-03
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 40.28
E-value: 4.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 24 E EL RAKLTSIQIE F Q Q EKSKVGKLRERLQE A K L E R EQEQRR htayiselkak LH E EKTKE L QALREG L IR Q HEQEAARTA 103
Cdd:COG4913 272 A EL EYLRAALRLW F A Q RRLELLEAELEELR A E L A R LEAELE ----------- RL E ARLDA L REELDE L EA Q IRGNGGDRL 340
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 104 KIK E G E LQ RL QAT L N v L R DGAADKVKTA L -- L TEAREEARRA F dger LR L QQ E ILE L KA A RKQAE EAL SNCMQADKTKAA 181
Cdd:COG4913 341 EQL E R E IE RL ERE L E - E R ERRRARLEAL L aa L GLPLPASAEE F ---- AA L RA E AAA L LE A LEEEL EAL EEALAEAEAALR 415
170
....*....|....*...
gi 38641276 182 DLR AAYQAHQD E VHRIK R 199
Cdd:COG4913 416 DLR RELRELEA E IASLE R 433
PTZ00121
PTZ00121 MAEBL; Provisional
2-348
5.17e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 40.12
E-value: 5.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 2 S KK GRSKGE K P E METD A VQMANE E LRA K LTSIQIEFQQE K SKVG K LR E R L QE A KLEREQ E QRRHTAYISELKAKLH EE KT 81
Cdd:PTZ00121 1508 A KK KADEAK K A E EAKK A DEAKKA E EAK K ADEAKKAEEKK K ADEL K KA E E L KK A EEKKKA E EAKKAEEDKNMALRKA EE AK 1587
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 82 K ELQ A LR E GLIRQH E Q E AART A - KI K EG E LQRLQ A T l NVLRDGAAD K VKTA L LTEAR EE ARR A fdg E R L RLQQ E ILEL KA 160
Cdd:PTZ00121 1588 K AEE A RI E EVMKLY E E E KKMK A e EA K KA E EAKIK A E - ELKKAEEEK K KVEQ L KKKEA EE KKK A --- E E L KKAE E ENKI KA 1663
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 161 A RKQAEE alsncm QA DK T KA ADLRA A YQAHQDEVHRI K R E C E ----- RDIRRLMD E I K G K DRVILAL E K E LGVQ A GQTQ K 235
Cdd:PTZ00121 1664 A EEAKKA ------ EE DK K KA EEAKK A EEDEKKAAEAL K K E A E eakka EELKKKEA E E K K K AEELKKA E E E NKIK A EEAK K 1737
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 236 LLLQ - K EALD E QLVQVK E AERHHSSP K R E LPPGIGDMV E LMG V QDQHM DE R D VR R FQ lkia E LNSV I RKLE D RNTLLAD - 313
Cdd:PTZ00121 1738 EAEE d K KKAE E AKKDEE E KKKIAHLK K E E EKKAEEIRK E KEA V IEEEL DE E D EK R RM ---- E VDKK I KDIF D NFANIIE g 1813
330 340 350
....*....|....*....|....*....|....*..
gi 38641276 314 -- E R N ELLKR S R E T E VQLKPL V EKN K R M NKKNE D LLQ 348
Cdd:PTZ00121 1814 gk E G N LVIND S K E M E DSAIKE V ADS K N M QLEEA D AFE 1850
PspC_subgroup_1
NF033838 pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
23-374
6.15e-03
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain]
Cd Length: 684
Bit Score: 39.61
E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 23 N EE L RA KL TS I QI E F ------ QQ EKS KV --- G K LRER L QE A KLEREQEQRRHTAYIS E LKA K L h EE KT K ELQALR E GLI R 93
Cdd:NF033838 86 N VA L NK KL SD I KT E Y lyelnv LK EKS EA elt S K TKKE L DA A FEQFKKDTLEPGKKVA E ATK K V - EE AE K KAKDQK E EDR R 164
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 94 QHEQEAAR T --------- AKI K EG EL QRLQATLNVL RD ga AD K V K T A llt E A RE E ARR A fdg E RL RL Q qeil EL K AA R KQ 164
Cdd:NF033838 165 NYPTNTYK T leleiaesd VEV K KA EL ELVKEEAKEP RD -- EE K I K Q A --- K A KV E SKK A --- E AT RL E ---- KI K TD R EK 232
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 165 AEE ALSNCMQ A DKTK A ADLRA A YQAHQDEVH R I KR EC ---------- E R D IRRLMDEIKGKDRVILA L EK E LG V QAGQTQ 234
Cdd:NF033838 233 AEE EAKRRAD A KLKE A VEKNV A TSEQDKPKR R A KR GV lgepatpdkk E N D AKSSDSSVGEETLPSPS L KP E KK V AEAEKK 312
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 235 KLLLQ K E A L D E qlvqv KE AE R hhsspk R EL P PGIGDMV EL mgvqdqhmderdvrrfql K IAE LNSVIRKL E DR nt L LAD E 314
Cdd:NF033838 313 VEEAK K K A K D Q ----- KE ED R ------ R NY P TNTYKTL EL ------------------ E IAE SDVKVKEA E LE -- L VKE E 361
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 315 RN E ll K R SR E TEV Q L K PL VE KN K RMNKKN E DLLQSIQRM EE KI K NLTR E NVEM KEK LSA Q 374
Cdd:NF033838 362 AK E -- P R NE E KIK Q A K AK VE SK K AEATRL E KIKTDRKKA EE EA K RKAA E EDKV KEK PAE Q 419
GumC
COG3206 Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
23-246
7.16e-03
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain]
Cd Length: 687
Bit Score: 39.61
E-value: 7.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 23 N E ELR AKLTSIQI EF QQ E K sk VGK LR ER L Q EA KLER E QEQRRHTAYISELK AKL HEEKTK EL QALREGLIRQHEQEA AR T 102
Cdd:COG3206 165 N L ELR REEARKAL EF LE E Q -- LPE LR KE L E EA EAAL E EFRQKNGLVDLSEE AKL LLQQLS EL ESQLAEARAELAEAE AR L 242
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38641276 103 A KIK egel QR L QATLNV L RDGAADK V KTA L LTE a RE E ARRAFDGERL R LQQEILELK A A R K Q AEEALSNCM Q ADKTKA A D 182
Cdd:COG3206 243 A ALR ---- AQ L GSGPDA L PELLQSP V IQQ L RAQ - LA E LEAELAELSA R YTPNHPDVI A L R A Q IAALRAQLQ Q EAQRIL A S 317
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 38641276 183 L R A AYQ A H Q DEVHRIKRE c ERDIRRLMD E IKGKDRVILA LE K E LG V QAGQTQK LL LQK E ALDEQ 246
Cdd:COG3206 318 L E A ELE A L Q AREASLQAQ - LAQLEARLA E LPELEAELRR LE R E VE V ARELYES LL QRL E EARLA 380
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
