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Conserved domains on  [gi|119862969|gb|ABM02446|]
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conserved hypothetical protein [Psychromonas ingrahamii 37]

Protein Classification

DUF3465 domain-containing protein( domain architecture ID 10571577)

DUF3465 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3465 pfam11948
Protein of unknown function (DUF3465); This family of proteins are functionally ...
 8-131 1.11e-80

Protein of unknown function (DUF3465); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 131 to 151 amino acids in length. This protein has a conserved HWTH sequence motif.


:

Pssm-ID: 432212  Cd Length: 124  Bit Score: 232.77  E-value: 1.11e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119862969    8 IIVLLSILSFPVWADDTHLKQAYESLQSDIQVQGQGEVIKILADDTYGAKHQRFILRLVNHQTILVSHNIDLAPRISNLK 87
Cdd:pfam11948   1 VVMLLSFGVSPAAANDTRLQQAYQSQQSDVQVQGEGKVIKILPDDNKGSRHQRFILRLDSGQTLLIAHNIDLAPRINNLQ 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 119862969   88 AGDWVEFYGEYEWNSKGGVVHWTHKDPRHSHAHGWLKHRNKKYN 131
Cdd:pfam11948  81 VGDTVEFYGEYEWNKKGGVVHWTHKDPRNRHAHGWLKHNGKVYQ 124
 
Name Accession Description Interval E-value
DUF3465 pfam11948
Protein of unknown function (DUF3465); This family of proteins are functionally ...
 8-131 1.11e-80

Protein of unknown function (DUF3465); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 131 to 151 amino acids in length. This protein has a conserved HWTH sequence motif.


Pssm-ID: 432212  Cd Length: 124  Bit Score: 232.77  E-value: 1.11e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119862969    8 IIVLLSILSFPVWADDTHLKQAYESLQSDIQVQGQGEVIKILADDTYGAKHQRFILRLVNHQTILVSHNIDLAPRISNLK 87
Cdd:pfam11948   1 VVMLLSFGVSPAAANDTRLQQAYQSQQSDVQVQGEGKVIKILPDDNKGSRHQRFILRLDSGQTLLIAHNIDLAPRINNLQ 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 119862969   88 AGDWVEFYGEYEWNSKGGVVHWTHKDPRHSHAHGWLKHRNKKYN 131
Cdd:pfam11948  81 VGDTVEFYGEYEWNKKGGVVHWTHKDPRNRHAHGWLKHNGKVYQ 124
 
Name Accession Description Interval E-value
DUF3465 pfam11948
Protein of unknown function (DUF3465); This family of proteins are functionally ...
 8-131 1.11e-80

Protein of unknown function (DUF3465); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 131 to 151 amino acids in length. This protein has a conserved HWTH sequence motif.


Pssm-ID: 432212  Cd Length: 124  Bit Score: 232.77  E-value: 1.11e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119862969    8 IIVLLSILSFPVWADDTHLKQAYESLQSDIQVQGQGEVIKILADDTYGAKHQRFILRLVNHQTILVSHNIDLAPRISNLK 87
Cdd:pfam11948   1 VVMLLSFGVSPAAANDTRLQQAYQSQQSDVQVQGEGKVIKILPDDNKGSRHQRFILRLDSGQTLLIAHNIDLAPRINNLQ 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 119862969   88 AGDWVEFYGEYEWNSKGGVVHWTHKDPRHSHAHGWLKHRNKKYN 131
Cdd:pfam11948  81 VGDTVEFYGEYEWNKKGGVVHWTHKDPRNRHAHGWLKHNGKVYQ 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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