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Conserved domains on  [gi|217507665|gb|ACK54676|]
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Domain of unknown function DUF1924 [Thauera sp. MZ1T]

Protein Classification

DUF1924 domain-containing protein( domain architecture ID 10557473)

DUF1924 domain-containing protein similar to Rhodobacter sphaeroides cytochrome c-type sphaeroides heme protein (SHP) that transiently binds oxygen during autoxidation, which occurs with a half-life of 3 min with a 4-fold excess of O(2); also binds carbon monoxide, azide and cyanide

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1924 pfam09086
Domain of unknown function (DUF1924); This domain is found in a set of bacterial proteins, ...
 46-135 8.29e-48

Domain of unknown function (DUF1924); This domain is found in a set of bacterial proteins, including Cytochrome c-type protein. It is functionally uncharacterized.


:

Pssm-ID: 430400  Cd Length: 91  Bit Score: 148.94  E-value: 8.29e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217507665   46 FSAARGEALHRTRHGLGKPDTPACTSCHGENARSAGQ-TRTGKAIEPMAVSVSATRYGDPAKVEKWFKRNCNEVLGRECS 124
Cdd:pfam09086   1 FSAERGEALFTRKHKTKKGKEWSCASCHGTDPTQSGKhAKTGKVIEPLAPSVNPKRFTDAAKVEKWFRRNCKDVLGRECT 80

                          90
                  ....*....|.
gi 217507665  125 AREKGDWLAWM 135
Cdd:pfam09086  81 AQEKGDFLAYL 91
 
Name Accession Description Interval E-value
DUF1924 pfam09086
Domain of unknown function (DUF1924); This domain is found in a set of bacterial proteins, ...
 46-135 8.29e-48

Domain of unknown function (DUF1924); This domain is found in a set of bacterial proteins, including Cytochrome c-type protein. It is functionally uncharacterized.


Pssm-ID: 430400  Cd Length: 91  Bit Score: 148.94  E-value: 8.29e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217507665   46 FSAARGEALHRTRHGLGKPDTPACTSCHGENARSAGQ-TRTGKAIEPMAVSVSATRYGDPAKVEKWFKRNCNEVLGRECS 124
Cdd:pfam09086   1 FSAERGEALFTRKHKTKKGKEWSCASCHGTDPTQSGKhAKTGKVIEPLAPSVNPKRFTDAAKVEKWFRRNCKDVLGRECT 80

                          90
                  ....*....|.
gi 217507665  125 AREKGDWLAWM 135
Cdd:pfam09086  81 AQEKGDFLAYL 91
 
Name Accession Description Interval E-value
DUF1924 pfam09086
Domain of unknown function (DUF1924); This domain is found in a set of bacterial proteins, ...
 46-135 8.29e-48

Domain of unknown function (DUF1924); This domain is found in a set of bacterial proteins, including Cytochrome c-type protein. It is functionally uncharacterized.


Pssm-ID: 430400  Cd Length: 91  Bit Score: 148.94  E-value: 8.29e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217507665   46 FSAARGEALHRTRHGLGKPDTPACTSCHGENARSAGQ-TRTGKAIEPMAVSVSATRYGDPAKVEKWFKRNCNEVLGRECS 124
Cdd:pfam09086   1 FSAERGEALFTRKHKTKKGKEWSCASCHGTDPTQSGKhAKTGKVIEPLAPSVNPKRFTDAAKVEKWFRRNCKDVLGRECT 80

                          90
                  ....*....|.
gi 217507665  125 AREKGDWLAWM 135
Cdd:pfam09086  81 AQEKGDFLAYL 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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