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Conserved domains on  [gi|261285687|gb|ACX67658|]
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conserved hypothetical protein [Paenibacillus sp. Y412MC10]

Protein Classification

YuiB family protein( domain architecture ID 10624052)

YuiB family protein is a putative membrane protein with a conserved FGIGF sequence motif

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YuiB pfam14068
Putative membrane protein; This family of bacterial proteins is functionally uncharacterized. ...
 6-99 1.06e-27

Putative membrane protein; This family of bacterial proteins is functionally uncharacterized. Proteins in this family are approximately 100 amino acids in length. There is a conserved FGIGF sequence motif, and many members are putative membrane proteins.


:

Pssm-ID: 433692  Cd Length: 101  Bit Score: 96.56  E-value: 1.06e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261285687    6 PVLVLMILFFVMMFGIGFILNMLMKTTWfpcflFVIVILPVVVYSLWDRGQM------------SFWTHVGSFQLVDYLT 73
Cdd:pfam14068   1 QLIISMVLFFVLFFGIGFILNMLLRTTW-----IMAVIYPIVVLFIIDNVKFieyftspgtafaSLGENLVSLALADILI 75

                          90       100
                  ....*....|....*....|....*.
gi 261285687   74 GVAGLIGAYMSGWTIKTLRIKGFRMF 99
Cdd:pfam14068  76 LSSGLAGAILSGVTIRMLRKRGYQMF 101
 
Name Accession Description Interval E-value
YuiB pfam14068
Putative membrane protein; This family of bacterial proteins is functionally uncharacterized. ...
 6-99 1.06e-27

Putative membrane protein; This family of bacterial proteins is functionally uncharacterized. Proteins in this family are approximately 100 amino acids in length. There is a conserved FGIGF sequence motif, and many members are putative membrane proteins.


Pssm-ID: 433692  Cd Length: 101  Bit Score: 96.56  E-value: 1.06e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261285687    6 PVLVLMILFFVMMFGIGFILNMLMKTTWfpcflFVIVILPVVVYSLWDRGQM------------SFWTHVGSFQLVDYLT 73
Cdd:pfam14068   1 QLIISMVLFFVLFFGIGFILNMLLRTTW-----IMAVIYPIVVLFIIDNVKFieyftspgtafaSLGENLVSLALADILI 75

                          90       100
                  ....*....|....*....|....*.
gi 261285687   74 GVAGLIGAYMSGWTIKTLRIKGFRMF 99
Cdd:pfam14068  76 LSSGLAGAILSGVTIRMLRKRGYQMF 101
 
Name Accession Description Interval E-value
YuiB pfam14068
Putative membrane protein; This family of bacterial proteins is functionally uncharacterized. ...
 6-99 1.06e-27

Putative membrane protein; This family of bacterial proteins is functionally uncharacterized. Proteins in this family are approximately 100 amino acids in length. There is a conserved FGIGF sequence motif, and many members are putative membrane proteins.


Pssm-ID: 433692  Cd Length: 101  Bit Score: 96.56  E-value: 1.06e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261285687    6 PVLVLMILFFVMMFGIGFILNMLMKTTWfpcflFVIVILPVVVYSLWDRGQM------------SFWTHVGSFQLVDYLT 73
Cdd:pfam14068   1 QLIISMVLFFVLFFGIGFILNMLLRTTW-----IMAVIYPIVVLFIIDNVKFieyftspgtafaSLGENLVSLALADILI 75

                          90       100
                  ....*....|....*....|....*.
gi 261285687   74 GVAGLIGAYMSGWTIKTLRIKGFRMF 99
Cdd:pfam14068  76 LSSGLAGAILSGVTIRMLRKRGYQMF 101
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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