|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15255 |
PRK15255 |
fimbrial outer membrane usher protein StdB; Provisional |
1-829 |
0e+00 |
|
fimbrial outer membrane usher protein StdB; Provisional
Pssm-ID: 185167 [Multi-domain] Cd Length: 829 Bit Score: 1654.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 1 MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGLDA 80
Cdd:PRK15255 1 MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGRDA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 81 AVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSADSQVRYSAENQRLTFIIPQAWMRYQDPDWIPPSRWSDGVT 160
Cdd:PRK15255 81 AVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 161 AGLLDYSLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLG 240
Cdd:PRK15255 161 AGLLDYSLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 241 QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLD 320
Cdd:PRK15255 241 QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 321 VSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQ 400
Cdd:PRK15255 321 VSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQ 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 401 SAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGG 480
Cdd:PRK15255 401 SAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 481 DAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSASVSFARNQYTGGGSQNQVYA 560
Cdd:PRK15255 481 DAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSASVSFARNQYTGGGSQNQVYA 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 561 TISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQ 640
Cdd:PRK15255 561 TISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQ 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 641 YRSLGLSWYGSVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPED 720
Cdd:PRK15255 641 YRSLGLSWYGSVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPED 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 721 VDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSLVVSGKTGRTAGMVGDDGLAYLTGLSGEDRRTLN 800
Cdd:PRK15255 721 VDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGALVVSGKTGRTAGMVGDDGLAYLTGLSGEDRRTLN 800
|
810 820
....*....|....*....|....*....
gi 340762707 801 VSWDGRVQCRLTLPETVTLSRGPLLLPCR 829
Cdd:PRK15255 801 VSWDGRVQCRLTLPETVTLSRGPLLLPCR 829
|
|
| FimD |
COG3188 |
Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]; |
2-829 |
0e+00 |
|
Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures];
Pssm-ID: 442421 [Multi-domain] Cd Length: 817 Bit Score: 778.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 2 KITRLAILITLTFSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVrEQYPVRVVPVAGLDAA 81
Cdd:COG3188 6 RLALLLLLLLALAAAAAAAAVEFNPAFLDGDDAAAIDLSRFSRGNYVPPGTYYLDVYVNGQPL-GRGDITFVADRDDGRL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 82 VICVTTDMVAMLGLKDKIIHGLKPvtgiPDGQCLELRS-ADSQVRYSAENQRLTFIIPQAWMRYQDPDWIPPSRWSDGVT 160
Cdd:COG3188 85 QPCLTPELLEQLGLKLDALPALLA----ADGQCVDLSAiPGASVRFDFATQRLDLSVPQAALPYQARGYVPPSLWDDGIP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 161 AGLLDYSLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDfylpQTYLFRALPALRSKLTLG 240
Cdd:COG3188 161 ALLLNYDLNASRSRGRSGSASESRYLGLNSGLNLGAWRLRNNSSYSYSSGGGSGWQRL----DTYLQRDIPALRSQLTLG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 241 QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDL-SQNISGNL 319
Cdd:COG3188 237 DSYTSSDWFDSVRFRGVQLASDFRMLPDSLRGYAPVVRGIAASNATVTVRQNGYVIYQTTVPPGPFEINDLpPTGGAGDL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 320 DVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNstvSPDFLLGEATWGAFNNTSLYGGLIAStGDY 399
Cdd:COG3188 317 DVTVTEADGREQTFTVPFASVPQLLRPGLSRYSLAAGRYRRNGSFDY---GPPFAQGTLRYGLSNGLTLYGGAEAA-EDY 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 400 QSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDG 479
Cdd:COG3188 393 QAGGLGAGFNLGALGALSADVTQSRARLPDDDTGSGQSYRLGYSKSFDETGTNFSLAGYRYSTRGYRDLSDALDARDSGG 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 480 G-DAWHEKQSYTVTYSQSVPvLNMSAALSVSRLNYWN-AQSNNNYMLSFNKVFslgdlQGLSASVSFARNQYTGGGSQNQ 557
Cdd:COG3188 473 DnSSYRPRSRFQATLSQSLG-DGGSLYLSYSQQDYWDgSGRTRSYSLGYSNSL-----RNISYSLSASRSRNGGGRRDRS 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 558 VYATISIPWGDSRQVSYSVQKDNRGGLQQTVNYSD--FHNPDTTWNISAGHNRydTGSNSSFSGSVQSRLPWGQAAADAT 635
Cdd:COG3188 547 VSLSLSIPLGNRSSASYSLSRDNGGGTSQQVGLSGsaPEDGGLGYSLSAGYGS--GGDGNSGSANLSYRGSYGTLSAGYS 624
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 636 lQPGQYRSLGLSWYGSVTATAHGAAFSQSMagNEPRMMIDTGDVAGVPVNGNSGV-TNRFGVGVVSAGSSYRRSDISVDV 714
Cdd:COG3188 625 -YSRGYRQVSAGASGGLVAHAGGVTLSRRL--GDTFALVDAPGAAGVPVNNERGGrTDRRGYALVPYLTPYRRNRVSIDP 701
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 715 AALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSlVVSGKTGRTAGMVGDDGLAYLTGLSGE 794
Cdd:COG3188 702 LDLPDDVELDNTEQRVVPTRGAGVLVRFPTRRGRRALLTLRDADGKPLPFGA-EVTDEGGQEVGIVGQDGQVYLSGLPPQ 780
|
810 820 830
....*....|....*....|....*....|....*....
gi 340762707 795 DRrtLNVSW-DGRVQCR--LTLPETVTLSRGP-LLLPCR 829
Cdd:COG3188 781 GT--LTVKWgDGAQQCRasYTLPASADGQGIPrLPLTCR 817
|
|
| PRK15284 |
PRK15284 |
putative fimbrial outer membrane usher protein StfC; Provisional |
14-829 |
0e+00 |
|
putative fimbrial outer membrane usher protein StfC; Provisional
Pssm-ID: 185184 [Multi-domain] Cd Length: 881 Bit Score: 628.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 14 FSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVR-VVPVAGLDAAVICVTTDMVAM 92
Cdd:PRK15284 25 VNAWAEDDIQFDSRFLELKGDTKIDLKRFSSKGYVEPGKYNLQVQLNKQPLAEEYDIYwYASENDPSKTYACLTPELVAQ 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 93 LGLKDKIIHGLKpvtGIPDGQCLELRSADS-QVRYSAENQRLTFIIPQAWMRYQDPDWIPPSRWSDGVTAGLLDYSLMVN 171
Cdd:PRK15284 105 LGLKEDIAKNLQ---WIHDGKCLKPGQLEGmEIKADLSQSALVISLPQAYLEYTDPDWDPPSRWDDGIPGLIADYSINAQ 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 172 -RYMPQQGETSTSYSLYGTAGFNLGAWRLR----SDYQYSRF-----DSGQGASQSDFYLPQTYLFRALPALRSKLTLGQ 241
Cdd:PRK15284 182 tRHEENGGDDSNDISGNGTVGVNLGAWRLRadwqTNYQHTRSnddddEFSGSSTQKNWDWSRYYAWRALPSLKAKLALGE 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 242 TYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLDV 321
Cdd:PRK15284 262 DYLNSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDIGDSVSGTLHV 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 322 SVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVspdFLLGEATWGAFNNTSLYGGLIASTgDYQS 401
Cdd:PRK15284 342 RIEEQNGQVQEYDVSTASMPFLTRPGQVRYKLMMGRPQDWGHHVEGGF---FSGAEASWGIANGWSLYGGALGDE-NYQS 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 402 AALGIGQNMGLLGALSADVTRSDARLPHGQ-----KQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRA 476
Cdd:PRK15284 418 AALGVGRDLALFGAVAFDVTHSHTKLDKDSaygkgSLDGNSFRVSYAKDFDELNSRVTFAGYRFSEENFMTMSEYLDASD 497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 477 TDGGDAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSASVSFARNQYTGGGSQN 556
Cdd:PRK15284 498 SDMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTHHTYWDRPEQTNYNLMLSHYFNMGSIRNMSISVTGYRYEYDNQADKG 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 557 qVYATISIPWGDSRQVSYSvqkDNRGGLQQTVNYSDFHNPD--TTWNISAGhnryDTGSNSSFSGSVQSRLPWGQAAADA 634
Cdd:PRK15284 578 -VYISLSIPWGDNSTVSYN---GNYGSGSDSSQVGYFSRVDdaTHYQLNVG----TSDNHTSVDGYYSHDGSLAQVDLSA 649
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 635 TLQPGQYRSLGLSWYGSVTATAHGAAF--SQSMAGNepRMMIDTGDVAGVPVNGNSGV--TNRFGVGVVSAGSSYRRSDI 710
Cdd:PRK15284 650 NYHEGQYTSAGLSLQGGATLTAHGGALhrTQNMGGT--RLLIDADGVANVPVEGNGAAvyTNMFGKAVVADVNNYYRNQA 727
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 711 SVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSLVVSGKTgRTAGMVGDDGLAYLTG 790
Cdd:PRK15284 728 YIDLNNLPEDAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLRDGSHPPFGAEVKNDNQ-QQVGLVDDDGNVYLAG 806
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 340762707 791 LSGEDRrtLNVSWDGRVQCRLTLPETV--TLSRGpLLLPCR 829
Cdd:PRK15284 807 VKPGEH--MQVFWEGVAHCEINLPDPLpaDLFNG-LLLPCQ 844
|
|
| PRK15273 |
PRK15273 |
fimbrial biogenesis outer membrane usher protein; |
23-829 |
0e+00 |
|
fimbrial biogenesis outer membrane usher protein;
Pssm-ID: 185176 [Multi-domain] Cd Length: 881 Bit Score: 580.96 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 23 EFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVR-VVPVAGLDAAVICVTTDMVAMLGLKDKIIH 101
Cdd:PRK15273 16 EFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNwVIPEHDPQGSEVCAEPELVTQLGIKPELAE 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 102 GLKPVTGiPDGQCL---ELRSADSQVRYSaeNQRLTFIIPQAWMRYQDPDWIPPSRWSDGVTAGLLDYSLMVN-RYMPQQ 177
Cdd:PRK15273 96 KLVWITH-GERQCLapdSLKGMDFQADLG--HSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQlRHDQES 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 178 GETSTSYSLYGTAGFNLGAWRLRSDYQYS---RFDSGQGASQSDFYLPQTYLFRALPALRSKLTLGQTYLSSAIFDSFRF 254
Cdd:PRK15273 173 GSEEQSISGNGTLGANLGAWRLRADWQASydhRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNY 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 255 AGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLDVSVRESDGSVRTWQ 334
Cdd:PRK15273 253 IGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFD 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 335 VNTASVPFMARQGQVRYKVAAGRPLYGGTHnnsTVSPDFLLGEATWGAFNNTSLYGGLIASTgDYQSAALGIGQNMGLLG 414
Cdd:PRK15273 333 VNTASVPFLTRPGMVRYKMALGRPQDWDHH---PITGTFASAEASWGVTNGWSLYGGAIGES-NYQAVALGSGKDLGVVG 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 415 ALSADVTRSDARLPH-----GQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGGDAWHEKQSY 489
Cdd:PRK15273 409 AVAVDITHSIAHMPQddgfdGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERY 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 490 TVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSASVSFARNQYTgGGSQNQVYATISIPWGDS 569
Cdd:PRK15273 489 TVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYN-GDKDDGVYISLSVPWGND 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 570 rQVSYSvQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNryDTGSNSSFSGSVQSRLPWGQAAADatLQPGQYRSLGLSWY 649
Cdd:PRK15273 568 -SISYN-GTFNGSQHRNQLGYSGHSQNGDNWQLHVGQD--EQGAQADGYYSHQGALTDIDLSAD--YEEGSYRSLGMSLR 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 650 GSVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSG--VTNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSV 727
Cdd:PRK15273 642 GGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSptSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSV 721
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 728 ISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSLVVSGKTgRTAGMVGDDGLAYLTGL-SGEdrrTLNVSWDGR 806
Cdd:PRK15273 722 VQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQ-QQLGLVADDGNAWLAGVkAGE---TLKVFWDGA 797
|
810 820
....*....|....*....|....*
gi 340762707 807 VQCRLTLPETVT--LSRGPLLLPCR 829
Cdd:PRK15273 798 AQCEASLPPTFTpeLLANALLLPCK 822
|
|
| Usher |
pfam00577 |
Outer membrane usher protein; In Gram-negative bacteria the biogenesis of fimbriae (or pili) ... |
185-741 |
2.10e-172 |
|
Outer membrane usher protein; In Gram-negative bacteria the biogenesis of fimbriae (or pili) requires a two- component assembly and transport system which is composed of a periplasmic chaperone and an outer membrane protein which has been termed a molecular 'usher'. The usher protein is rather large (from 86 to 100 Kd) and seems to be mainly composed of membrane-spanning beta-sheets, a structure reminiscent of porins. Although the degree of sequence similarity of these proteins is not very high they share a number of characteriztics. One of these is the presence of two pairs of cysteines, the first one located in the N-terminal part and the second at the C-terminal extremity that are probably involved in disulphide bonds. The best conserved region is located in the central part of these proteins.
Pssm-ID: 425762 [Multi-domain] Cd Length: 549 Bit Score: 508.77 E-value: 2.10e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 185 SLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSdfylPQTYLFRALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDER 264
Cdd:pfam00577 1 YLNLQSGLNLGAWRLRNDSNWTQSRGNTGKWQN----SRTYLQRAIPQLKSRLTLGESYTSSDIFDSFSFRGVQLASDDN 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 265 MLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQ-NISGNLDVSVRESDGSVRTWQVNTASVPFM 343
Cdd:pfam00577 77 MLPDSLRGYAPVIRGIARTNARVTIRQNGYVIYQTLVPPGPFEITDLYPtGSSGDLDVTVEEADGSVQTFTVPYSSVPLL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 344 ARQGQVRYKVAAGRPLYGgthNNSTVSPDFLLGEATWGAFNNTSLYGGLIAStGDYQSAALGIGQNMGLLGALSADVTRS 423
Cdd:pfam00577 157 LRPGQVRYSLAAGRYRSG---NSDQESPFFFQATASWGLPNGLTLYGGLQGA-DDYQAAALGLGRNLGDLGALSVDVTQS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 424 DARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGGD---AWHEKQSYTVTYSQSVPvL 500
Cdd:pfam00577 233 RSQLDNQSSEQGQSYRFLYNKSLNETGTNFQLAGYRYSTRGFYTLADALDARMDGFDYynlTYNKKNSYQLNVSQSLG-G 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 501 NMSAALSVSRLNYWN-AQSNNNYMLSFNkvFSLGDLqGLSASVSFARNQYTgGGSQNQVYATISIPWGD-----SRQVSY 574
Cdd:pfam00577 312 WGSLYLSGSRQTYWGtSGTSYNLQLGYN--TNIGRV-SVSLSWSYSRNEYE-NGEDDLLYLNLSIPFGRglsraNSSYSM 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 575 SVQKDNRGGLQQTVNYSDFHNpDTTWNISAGhnrYDTGSNSSFSGSVQSRLPWGQAAADATLQPGqYRSLGLSWYGSVTA 654
Cdd:pfam00577 388 TRNNSGRTTSNTGVYGTLLDD-NLSYSVNAG---RASDGRHTGSGNLSYQGSYGTVSGSYSYGRD-YRQLNYSVSGGIVA 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 655 TAHGAAFSQSMagNEPRMMIDTGDVAGVPVNGNSGV-TNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLT 733
Cdd:pfam00577 463 HAHGVTLSQYL--GDTRALIDAPGAAGVRVNNQTGVkTDWRGYAVVPYLTPYRENRVELDTNDLPDDVDLENTVVQVVPT 540
|
....*...
gi 340762707 734 EGAVGYRK 741
Cdd:pfam00577 541 EGAVVYAR 548
|
|
| PRK09828 |
PRK09828 |
putative fimbrial outer membrane usher protein; Provisional |
2-816 |
8.15e-117 |
|
putative fimbrial outer membrane usher protein; Provisional
Pssm-ID: 182098 [Multi-domain] Cd Length: 865 Bit Score: 374.85 E-value: 8.15e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 2 KITRLAILITLTFSV--LKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQ-YPVRVVpvaGL 78
Cdd:PRK09828 12 HLTRLATFCALLYSNsaACAELVEYDHTFLMGQGASNIDLSRYSEGNPTLPGTYDVSVYVNDQPISSQsIPFIDI---GK 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 79 DAAVICVTTDMVAMLGLKDKIIHGLKPVTGIPD---GQCLELRSA--DSQVRYSAENQRLTFIIPQAWM--RYQDpdWIP 151
Cdd:PRK09828 89 KNAQACITLKNLLQFHIKSPDINNEKAILLARDdelGDCLNLTKIipQASVRYDVSDQRLDIDVPQAWVmkNYQG--YVD 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 152 PSRWSDGVTAGLLDYSLmvNRYMpQQGETSTSYSLYGT--AGFNLGAWRLRSDYQYS-RFDSGqgasqSDFYLPQTYLFR 228
Cdd:PRK09828 167 PSLWENGINAAMLSYNL--NGYH-SESPGRTNDSIYAAfnGGINLGAWRLRARGNYNwMTDSG-----SDYDFQNRYLQR 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 229 ALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFEL 308
Cdd:PRK09828 239 DIAALRSQLIIGESYTTGETFDSVSIRGIRLYSDSRMLPPGLASYAPIIRGVANSNAKVTITQSGYKIYETTVPPGAFVI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 309 PDLSQNISGN-LDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNstvsPDflLGEATW-GAFNNT 386
Cdd:PRK09828 319 DDLSPSGYGSdLIVTIEEADGSKRTFSQPFSSVVQMLRPGVGRWDISAGQVLDDSLQDE----PN--LGQASYyYGLNNY 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 387 -SLYGGLIASTGDYQSAALGIGQNMGlLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHF 465
Cdd:PRK09828 393 lTGYTGIQYTDNNYTAGLLGLGMNTS-VGAFAFDVTHSNAEIPDDKTYQGQSYRLTWNKLFEATSTSFNVAAYRYSTQDY 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 466 LSMPEYLQrrATDG---GDAWHEKQSYT--------VTYSQSVPvLNM------SAALSVSRLNYWN-AQSNNNYMLSFN 527
Cdd:PRK09828 472 LGLNDALT--LIDEvkhPEQDLEPKSMRnysrmknqVTVSINQP-LKFekkdygSFYLSGSWSDYWAsGQSRSNYSVGYS 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 528 KVFSLGdlqglSASVSFARNQYTGGGSQNQVYATISIP----WGDSRQ------VSYSVQKDNRGGLQQTVNYSDF-HNP 596
Cdd:PRK09828 549 NSASWG-----SYSVSLQRSWNEDGEKDDSVYLSFSIPienlLGTERRssgfqsIDTQLNSDFKGNNQLNVSSSGNsEDN 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 597 DTTWNISAGHNRYDTGSN-SSFSGSVQSRLPWGQAAADATLQPGQYRSLGLSWYGSVTATAHGAAFSQ-SMAGNEPRMMI 674
Cdd:PRK09828 624 RISYSVNTGYSMNKNSKDlSYVGGYASYESPWGTLSGSASASSDNSRQYSLSTDGGFVLHSGGLTFSNdSFSDSDTLALV 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 675 DTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHI 754
Cdd:PRK09828 704 KAPGAKGARINYGNSTIDRWGYGVTSALSPYRENRVALDINTLENDVELKSTSAVAVPRQGAVVLADFETDQGRSAIMNI 783
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 340762707 755 RLADGASPPFGSLVVSGKtGRTAGMVGDDGLAYLTGLsgEDRRTLNVSWDGR---VQCRLT--LPET 816
Cdd:PRK09828 784 TRSDGKNIPFAADVYDEQ-GNVIGNVGQGGQAFVRGI--EDQGELRIRWLEEgkpVSCLAHyqQPAT 847
|
|
| PRK15193 |
PRK15193 |
outer membrane usher protein; Provisional |
3-803 |
2.22e-112 |
|
outer membrane usher protein; Provisional
Pssm-ID: 237919 [Multi-domain] Cd Length: 876 Bit Score: 363.46 E-value: 2.22e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 3 ITRLAILITLTFSVLKSQATE-FNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLND----------QPVREQYPVR 71
Cdd:PRK15193 17 VPSLALGIVVFVSAGNAQAETyFNPAFLSDDPSMVADLSRFEKGAKIAAGVYRVDIVLNNtfvatrdvnfVEIKTTGKSA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 72 VVPVAGLDAaviCVTTDMVAMLGLKDKIIHGLKPVTGipdGQCLELRSA--DSQVRYSAENQRLTFIIPQAWMRYQDPDW 149
Cdd:PRK15193 97 PTDDKGLAA---CLTTESLDAMGVNTDAFPAFKQLAK---GACPPLASIipDASVTFDFNKQRLDISVPQIAIKSSARGY 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 150 IPPSRWSDGVTAGLLDYSL--MVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRfDSGQGASQSDFYLPQTYLF 227
Cdd:PRK15193 171 IPPERWDEGINALLLNYSFsgANSIHSSADSDSGDSYFLGLNSGVNLGPWRLRNYSTWNR-SSGQTAEDSDWQHISSYLE 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 228 RALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFE 307
Cdd:PRK15193 250 RAVIPLKGELTAGDSYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPTVRGIAKSNAQVTIKQNGYTIYQTYVSPGAFE 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 308 LPDL-SQNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLyggTHNNSTVSPDFLLGEATWGAFNNT 386
Cdd:PRK15193 330 ISDLyPTSSSGDLLVEVKEADGSINSYSVPYSAVPLLQREGRIKYAVTLAKYR---TNSNEQQEVKFAQATLQWGLPHGF 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 387 SLYGGLIASTgDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFL 466
Cdd:PRK15193 407 TWYGGTQLSE-YYHALAFGLGFNLGDWGAISFDATQAKSTLADQSEHKGQSYRFLYAKSLNQLGTNFQLMGYRYSTSGFY 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 467 SMPEYLQRRaTDGGDAWHEKQS----------YTVTYSQSVPV-LNMSAAL--------SVSRLNYWNAQSNNNYM-LSF 526
Cdd:PRK15193 486 TLSDTMYKH-MDGYEFDDGDDEdkstpmwsdyYNLFYTKRGKLqVNISQQLgeygsfylSGSQQTYWHTDQKDRLLqFGY 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 527 NKVfslgdLQGLSASVSFARNQYTGGGSQNQVYA-TISIP---W----GDSRQ-----VSYSVQKDNRGGLQQTVNYSD- 592
Cdd:PRK15193 565 NTQ-----IKDISLGVSYNYSKSRGQPDADQVFAlNFSLPlnlWlprsNDTRKkhnayATSSTSIDNEGHVTQNAGLTGt 639
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 593 -FHNPDTTWNISAGHNRYDTGSNSSfsgsvqSRLPWGQAAADATL-----QPGQYRSLGLSWYGSVTATAHGAAFSQSMA 666
Cdd:PRK15193 640 lLDDNNLSYSVQQGYNNEGKGASGS------ASLDYKGAFGDANVgynysDNGSQQQLNYGLSGGLVAHSQGITLSQPLG 713
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 667 gnEPRMMIDTGDVAGVPVNGNSGV-TNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDAS 745
Cdd:PRK15193 714 --ETNVLIAAPGAENVRVANSTGLkTDWRGYAVVPYATSYRENRIALDAASLKDNVDLENAVVNVVPTKGALVLAEFNAH 791
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 746 QGEQVLghIRLADGASP-PFGSLV-VSGKtgRTAGMVGDDGLAYLTGLSGEDrrTLNVSW 803
Cdd:PRK15193 792 VGARAL--MTLSHQGIPlPFGATVtLDDQ--HNSGIVDDDGSVYLSGLPAQG--VLHVRW 845
|
|
| PRK15223 |
PRK15223 |
fimbrial biogenesis outer membrane usher protein; |
6-810 |
1.17e-97 |
|
fimbrial biogenesis outer membrane usher protein;
Pssm-ID: 185145 [Multi-domain] Cd Length: 836 Bit Score: 323.12 E-value: 1.17e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 6 LAILITLTFSVLKSQATEFNASLLDSGnLSNVDLTAFSReGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGLDAAVI-- 83
Cdd:PRK15223 8 LLLFIAGVVHCANAHTYTFDASMLGDA-AKGVDMSLFNQ-GVQQPGTYRVDVMVNGKRVDTRDVVFKLEKDGQGTPFLap 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 84 CVTTDMVAMLGLKDKIIHGLKPVTGIPDgQCLELRS-ADSQVRYSAENQRLTFIIPQAWMRYQDPDWIPPSRWSDGVTAG 162
Cdd:PRK15223 86 CLTVSQLSRYGVKTEDYPQLWKAAKTPD-ECADLTAiPQAKAVLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAF 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 163 LLDYSLMVNR--YMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFylpqTYLFRALPALRSKLTLG 240
Cdd:PRK15223 165 LMNYSARTTQtdYKMDMERRDNSSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAY----TYAERGLYSLKSRLTLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 241 QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLS-QNISGNL 319
Cdd:PRK15223 241 QKTSQGEIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPFALRDLSvTDSSGDL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 320 DVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRplyggTHNNSTVSPDFLLGEAT--WGAFNNTSLYGGLIASTg 397
Cdd:PRK15223 321 HVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGR-----YRSSDSATDKAQIAQATlmYGLPWNLTAYGGIQSAT- 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 398 DYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRAT 477
Cdd:PRK15223 395 HYQAASLGLGGSLGRWGSLSVDGSDTHSQRQGEAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRH 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 478 DGG--DAWHE----KQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNN-YMLSFNKvfslgDLQGLSASVSFARNQ-- 548
Cdd:PRK15223 475 DGNrlWSWREnlqpSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDsYGLSWGT-----SIGGGSLSLNWNQNRtl 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 549 -YTGGGSQNQVYAT-ISIP----WGDSRQVSYSVQKDNRGGLQQT--VNYSDFHNpDTTWNIsagHNRYDTGSNSSFSGS 620
Cdd:PRK15223 550 wRNGAHRKENITSLwFSMPlsrwTGNNVSASWQMTSPSHGGQTQQvgVNGEAFSQ-QLDWEV---RQSYRADAPPGGGNN 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 621 VQSRLPW----GQAAADATLQPGQyRSLGLSWYGSVTATAHGAAFSQSMAGNEPrmMIDTGDVAGVPVNGNSGV-TNRFG 695
Cdd:PRK15223 626 SALHLAWngayGLLGGDYSYSRAM-RQMGVNIAGGIVIHHHGVTLGQPLQGSVA--LVEAPGASGVPVGGWPGVkTDFRG 702
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 696 VGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSLV-VSGKTG 774
Cdd:PRK15223 703 DTTVGNLNVYQENTVSLDPSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVtVNGQDG 782
|
810 820 830
....*....|....*....|....*....|....*.
gi 340762707 775 rTAGMVGDDGLAYLTGLSgeDRRTLNVSWdGRVQCR 810
Cdd:PRK15223 783 -SAALVDTDSQVYLTGLA--DKGELTVKW-GAQQCR 814
|
|
| PRK15198 |
PRK15198 |
outer membrane usher protein FimD; |
6-815 |
9.12e-96 |
|
outer membrane usher protein FimD;
Pssm-ID: 185120 [Multi-domain] Cd Length: 860 Bit Score: 318.40 E-value: 9.12e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 6 LAILITLtFSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLND-----QPVR-EQYPVRVVPVAGld 79
Cdd:PRK15198 13 LSSLAIL-PPFLSYAESYFNPAFLSEDTASVADLSRFERGNHQPPGVYRVDIWRNDefigtQDIRfESTTVNTGDKSG-- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 80 AAVICVTTDMVAMLGLKdkiIHGLKPVTGIPDGQCLELRSA--DSQVRYSAENQRLTFIIPQAWMRYQDPDWIPPSRWSD 157
Cdd:PRK15198 90 GLMPCFTQELLERLGVN---SSAFPELAQQQDNKCINLLKAipGAEIAFDFASMRLNISLPQIALLNSARGYIPPEEWDE 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 158 GVTAGLLDYSLMVNRympqqGETSTSYSLYGTAGFNLGAWRLRSDYQYsRFDSGQGASQSDFYLPQTYLFRALPALRSKL 237
Cdd:PRK15198 167 GIPAALLNYSFTGNR-----GNDNDSYFLSLLSGLNYGPWRLRNNGAW-NYFRGNGYHSEQWNNIGTWVQRAIIPLKSEL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 238 TLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLS-QNIS 316
Cdd:PRK15198 241 VMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFAITDLNpTSSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 317 GNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGgthNNSTVSPDFLLGEATWGAFNNTSLYGGLIAST 396
Cdd:PRK15198 321 GDLDVTVDEKDGNQQRYTVPYSTVPLLQREGRVKYDLVAGDFRSG---NSQQSSPFFFQGTAIGGLPQGFTAYGGTQLAA 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 397 gDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFL--------SM 468
Cdd:PRK15198 398 -RYTAVLLGAGRNLGDWGAVSVDVTHARSQLADDSRHEGQSLRFLYAKSLNTFGTNFQLLGYRYSTQGFYtlddvayrSM 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 469 PEYLQRRATDGGDA------------WHEKQSYTVTYSQSVPVLNmSAALSVSRLNYWN-AQSNNNYMLSFNkvfslGDL 535
Cdd:PRK15198 477 EGYEYDYDSDGEHRdvpiiqsyhnlrFSKKGRFQLNISQSLGDYG-SLYISGSHQKYWNtSDSNTWYQLGYA-----SGW 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 536 QGLSASVSFARNQYTG-GGSQNQVYATISIPWG-------------DSRQVSYSVQKDNRG--GLQQTVNYSDFHNPDTT 599
Cdd:PRK15198 551 QGISYSLSWSWNESVGiPGNDRIVGFNVSVPFSvltkrrytrdnalDRAYATFNANRNSNGdnSWQTGVGGTLLEGRNLS 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 600 WNISAGHNrydtgSNSSFSGSVQSRlpWgqAAADATLQPGQYRSL---GLSWY--GSVTATAHGAAFSQSMAgnEPRMMI 674
Cdd:PRK15198 631 YSVTQGDT-----SNNGYSGSASAN--W--QATYGTLGVGYNYDRdqhDVNWQlsGGVVGHEDGITFSQPLG--DTNVLI 699
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 675 DTGDVAGVPVNGNSGV-TNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLgh 753
Cdd:PRK15198 700 KAPGAGGVRIENQTGVkTDWRGYAVMPYATVYRYNRVALDTNTMGNSTDVENNVSSVVPTQGALVRANFDTRIGVRAL-- 777
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 340762707 754 IRLADGASP-PFGSLVVSGKTGRTAgMVGDDGLAYLTG--LSGEdrrtLNVSW-DG-RVQCR--LTLPE 815
Cdd:PRK15198 778 ITVTQGGKPvPFGALVRETSSGITS-MVGDDGQIYLSGlpLSGE----LLIQWgDGaNSRCIahYVLPE 841
|
|
| PRK15248 |
PRK15248 |
fimbrial outer membrane usher protein; |
6-811 |
1.24e-87 |
|
fimbrial outer membrane usher protein;
Pssm-ID: 185160 [Multi-domain] Cd Length: 853 Bit Score: 296.37 E-value: 1.24e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 6 LAILITLTFSvlkSQATE----FNASLLdSGNLSNVDLTAFSREGYVApGNYILDIWLNDQPVREQYPVRVVPVAGLDAA 81
Cdd:PRK15248 12 LALLIAIVCS---GSAQGeeyyFDPALL-QGATYGQNIARFNEQQTPS-GDYLADVYVNGTLVTSSTNIRFNAVKEGQQT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 82 VICVTTDMVAMLGLKDkiihglkPVTGIPDGQCLELR--SADSQVRYSAENQRLTFIIPQAWMRYQDPDWIPPSRWSDGV 159
Cdd:PRK15248 87 EPCLPLSVMKAAQIKS-------LPATDAATECRPLRewVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 160 TAGLLDYSlmVNRYmpqQGETSTSYSLYG------TAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPAL 233
Cdd:PRK15248 160 LALFLRHN--TNWT---HTENTDSHYRYQylwsglNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASI 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 234 RSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDL-S 312
Cdd:PRK15248 235 NSILSLGDSYTDSSLFGSLSFNGIKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLyN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 313 QNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRplyggTHNNSTVSPDFLLGEATWGAFNN-TSLYGG 391
Cdd:PRK15248 315 TRYQGDLEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGR-----VRQYYDIENRFFEGTFQHGVNNTiTLNLGS 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 392 LIAStgDYQSAALGiGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDkTGSTLAFVGYRFSDRHFLSMPEY 471
Cdd:PRK15248 390 RIAQ--RYQAWLAG-GVWATGMGAFGLNATWSNARAEHNDRQQGWRAELSYSKTFT-TGTNLVLAAYRYSTNGFRDLQDV 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 472 LQ-RRATDGG-----DAWHEKQSYTVTYSQSVPVLNMsAALSVSRLNYWNAQS--------------NNNYMLSFNKVFS 531
Cdd:PRK15248 466 LGvRREAKTGidyysDTLHQRNRLSATVSQPLGRLGT-LNLSASTADYYNNQSritqlqmgysnqwrNISYGVNIARQRT 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 532 LGDLQGLSASVSF-----ARNQYTgggsQNQVYATISIP--WGDSR-QVSYSVQK--DNRGGlQQTVNYSDFHNPDTTWN 601
Cdd:PRK15248 545 TWDYDRFYHGVNEpldvsSRQKYT----ETTMSFNVSIPldWGENRtSVAMNYNQssQSRSS-TVSMTGSSGENSDLSWS 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 602 ISAGHNRY-----DTGSNSSFSGSVQSRLPWGQAAADATlQPGQYRSLGLSWYGSVTATAHGAAF----SQSMAgneprm 672
Cdd:PRK15248 620 VYGGYERYrnsnsDSSAPTTFGGNLQQNTRFGALRANYD-QGDNYRQEGLGASGTLVLHPGGLTAgpytSDTFA------ 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 673 MIDTGDVAGVPV-NGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVL 751
Cdd:PRK15248 693 LIHADGAQGAIVqNGQGAVVDRFGYAILPSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVL 772
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 340762707 752 GHIRLADGASPPFGSLVVSGKtGRTAGMVGDDGLAYltGLSGEDRRTLNVSW--DGRVQCRL 811
Cdd:PRK15248 773 ISVKMPDGGIPPMGADVFNGE-GTNIGMVGQSGQIY--ARIAHPSGSLLVRWgtGANQRCRV 831
|
|
| PRK15207 |
PRK15207 |
outer membrane usher protein LpfC; |
3-815 |
2.27e-87 |
|
outer membrane usher protein LpfC;
Pssm-ID: 185129 [Multi-domain] Cd Length: 842 Bit Score: 295.28 E-value: 2.27e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 3 ITRLAILITLTFSvlkSQATEFNASLLD--SGNLSNVDLTAF-SREGYVAPGNYILDIWLNDQPVREQY-----PVRVVP 74
Cdd:PRK15207 17 FSLLALTIASTLP---AYAGKFNPKFLEdvQGIDQHVDLSMYeSPVGQQLPGKYRVSVFVNEEKMESRTlefkaATEAQR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 75 VAGLDAAVICVTTDMVAMLGLKDKIIHGLKPvtgIPDGQCLELRSADSQV--RYSAENQRLTFIIPQAWMRYQDPDWIPP 152
Cdd:PRK15207 94 KAMGESLVPCLSRVQLEEMGVRVDSFPALKM---APPEACVAFDEIIPQAtsHFDFNTQTLHLSFPQAAMMQTARGTVPE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 153 SRWSDGVTAGLLDYSLMVN--RYMPQQGE---TSTSYSLYGTAGFNLGAWRLRSdyqYSRFDSGQGASQSDFYlpQTYLF 227
Cdd:PRK15207 171 SRWDEGIPALLLDYSFSGSngSYDGTGSSssyTSDSYYLNLRSGLNLGAWRLRN---YSTWNRTDGKNQWDNI--GTSLS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 228 RALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFE 307
Cdd:PRK15207 246 RAIIPLKSQLTLGDTATAGDIFDSVQMRGALLASDEEMLPDSQRGFAPVVRGIAKSNAEVSIEQNGYVIYRTFVQPGAFE 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 308 LPDL-SQNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGgthNNSTVSPDFLLGEATWGAFNNT 386
Cdd:PRK15207 326 INDLyPTSNSGDLTVIIKEADGSEQRFIQPFSSVAIFQREGHLKYSLAAGEYRAG---NYDSAKPKFGQLDAMYGLPWGM 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 387 SLYGGLIASTgDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDkTGSTLAFVGYRFSDRHFL 466
Cdd:PRK15207 403 TAYGGALLSA-DYNALALGLGKNFGYIGAISIDVTQAKSQLRNNEKSEGQSYRFLYSKSFE-SGTDFRLLGYKYSTSGYY 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 467 SMPEYLQRRATDGGD--AWHEKQSYTVTYSQSVPVLNmSAALSVSRLNYWNAQSNNNymlSFNKVFSlGDLQGLSASVSF 544
Cdd:PRK15207 481 TFQEATDVRSDADSDyrRYHKRSQIQGNITQQLGAYG-SVYFNMTQQDYWNDDGKQN---SLSAGYN-GRIGRVNYSVAY 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 545 ARNQYTGGGSQNQVYA-TISIPWGDSRQvSYSVQKDNRGGLQQTVNYSD--FHNPDTTWNISAGHNRYDTGSnssfSGSV 621
Cdd:PRK15207 556 TWTKSPEWDESDRLWSfSMSIPLGRAWS-NYRMTTDQNGRTNQQLGVSGtlLEDRNLSYSVQEGYTSNGVGN----SGSV 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 622 QSRLPWGQAAADATLQPGQ-YRSLGLSWYGSVTATAHGAAFSQSMAgnEPRMMIDTGDVAGVPVNGNSGV-TNRFGVGVV 699
Cdd:PRK15207 631 NLGYQGGSGNISVGYNYSKdNQQVNYGVRGGVIVHSEGITLSQPLG--ESMAIISAPGARGAHVVNNGGVeVDWMGNAVV 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 700 SAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSL-VVSGKTGRTAG 778
Cdd:PRK15207 709 PYLTPYRETEVSLRSDSLGQNVDLQEAFQKVVPTRGAIVRARFDTRVGYRVLMSLKQANGNAVPFGATaTLIDTTKEASS 788
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 340762707 779 MVGDDGLAYLTGLSGEDRrtLNVSW--DGRVQCRL--TLPE 815
Cdd:PRK15207 789 IVGEEGQLYISGMPEEGE--LQVSWgnDQAQQCRVpfRLPE 827
|
|
| PRK15298 |
PRK15298 |
fimbrial outer membrane usher protein; |
3-810 |
6.05e-87 |
|
fimbrial outer membrane usher protein;
Pssm-ID: 185198 [Multi-domain] Cd Length: 848 Bit Score: 294.36 E-value: 6.05e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 3 ITRLAILITL--TFSVLKSQATEFNASLLDS---GNLSNVDLTAFSREGYVAPGNYILDIWLNDQPV-REQYPVRVVPVA 76
Cdd:PRK15298 11 LSRCAVCIALgsTFAHVAWARDYFNPAFIENhgqANRTSVDLSTFDNDKSQLPGTYYVTININKTEIgARNVDFQLATLS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 77 -GLDAAVICVTTDMVAMLGLKDKIIHGLKPVTGIPDgqcLELRSADSQvRYSAENQRLTFIIPQAWMRYQDPDWIPPSRW 155
Cdd:PRK15298 91 dGQQALQGCLRLQELKDNGVKTDLFPTLESEKGCVD---LSVIPGASQ-RFDFQQQALSVSIPQLYIANNARGYVPPEKW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 156 SDGVTAGLLDYSLMVNRYMPQQGETSTSYSLYGT--AGFNLGAWRLRSDYQYSRfDSGQGASQSDFYlpqTYLFRALPAL 233
Cdd:PRK15298 167 QEGITALMLNYSFSGYKEYGSSEDSDDAESKYLAlqPGFNLGPWRFRNYSNWSS-NNGESGSWNSVY---NYLQRDIIAL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 234 RSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQ 313
Cdd:PRK15298 243 KSQFTAGDSNTPSDVFDSVPFRGLQLTSDDQMQPNSQRGYAPTIRGIARSNAQVIVRQNGYIAYQTAVSPGEFEINDMFP 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 314 NIS-GNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSPDFLLGEATWGafnnTSLYGGL 392
Cdd:PRK15298 323 TGSnGDYDVTVKEADGSEQHFIVPYSSLPILQRTGRAKYSVTVGKYRDYNNHTLDDFGQATLLYGLPWG----ITLYGGS 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 393 IASTGDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYL 472
Cdd:PRK15298 399 QIAGDKYQSVAFGVGQNMQMLGAISLDGIWSHAKFDDGRKEIGQSWRVRYSKGVVSTGTTFSLAGYRYASENYNSLSEVI 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 473 QRRATDGGDAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYW-NAQSNNNYMLSFNKvfSLGDLQgLSASVSFARNQYTG 551
Cdd:PRK15298 479 NPDDDFYDNYGKRHNRFEASVNQQISNTLGSLTLSWVKEDYWhSAQQMESLSASYNN--SWGPVS-YTLSYSYNKNTYQY 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 552 GG------------SQNQVYATIS--IPWG--DSR-QVSY--SVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRYD-- 610
Cdd:PRK15298 556 RSdnddddndddryNQNDRLFTLSlhVPFTvfDSRlYASYmlNTRKHDATVNSTTLSGTALRDRNLNWSLQQSHSTQDgd 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 611 -TGSNSSFSGSVQSRLPWGQAAADAtlqpgQYRSLGLSwyGSVTATAHGAAFSQSMAGnePRMMIDTGDVAGVPVNGNSG 689
Cdd:PRK15298 636 sGGVNASYKGTYANLNAGYNQSPDS-----QQVSYGIS--GGILAHENGITLSQPITG--AAILIKAPGASGVSVENQTG 706
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 690 VTNRF-GVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSLV 768
Cdd:PRK15298 707 VATDFrGYTVIPNVTPYYRYDISLDSSTFADNVDIPLNNQTVYPTRNAVVRAAYDTHKGYRVLLTLTRSNGEPVPFGATA 786
|
810 820 830 840
....*....|....*....|....*....|....*....|...
gi 340762707 769 -VSGKTGRTAGMVGDDGLAYLTGLSGEDrrTLNVSWdGRVQCR 810
Cdd:PRK15298 787 sVDGQDANLASIVGDKGQVFLSGLPEEG--LLLVNW-GSASCR 826
|
|
| PRK15213 |
PRK15213 |
outer membrane usher protein PefC; |
6-811 |
3.16e-84 |
|
outer membrane usher protein PefC;
Pssm-ID: 237926 [Multi-domain] Cd Length: 797 Bit Score: 285.87 E-value: 3.16e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 6 LAILITLtFSVLKSQATEFNASLLDSGnlSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQypvrVVPVAGLDAAVICV 85
Cdd:PRK15213 15 LAIFTHL-GFASAVAGEELNMSFIQGG--GGIPPEVLASNGDYPPGRYLVDVIFNGKKIGKA----ILSITPQEAEALCL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 86 TTDMVAMLGL---KDKIIHGLKPvtgipDGQCLEL-RSADSQVRYSAENQRLTFIIPQAWMRyqdpDWIPPSRWSDGVTA 161
Cdd:PRK15213 88 SPEWLKKAGIpvsLEYYRSGYDA-----ARQCYVLsKAPSVQVDFDYSTQSLTLSIPQAGLV----KKPEPVEWDYGVPA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 162 GLLDYSLMVNRYMPQQGETSTSYSLYgtagFNLGAWRLRSDYQYSRFDSGQGASQSDFYLpqtyLFRALPALRSKLTLGQ 241
Cdd:PRK15213 159 FRLNYSANASKTSRQNTSAYGNADLK----ANLGRWVLSSRASASRGAGGSNEFTTNDFT----LTTAIKSLQGDLLVGK 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 242 TYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLDV 321
Cdd:PRK15213 231 TQTGNSLLGSFGFYGASLRSNNDMLPWENRGYAPVISGIANGPSRVTISQNGYTLYSEVVPAGPFQLDDVPLVGSGDLTV 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 322 SVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSpDFLLGEATWGaFNNTSLYGGLIAStGDYQS 401
Cdd:PRK15213 311 TVEEEDGHKTTQVFPVAVLPGLLRPGEHEYNVAAGLKDDNYDLKKPENG-LFFAGSYGYG-FDGLTLNAAGILN-QNYQG 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 402 AALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTgSTLAFVGYRFSDRHFLSMPEYlqrratDGGD 481
Cdd:PRK15213 388 GGVGVVQGLGYFGAVSASGNLSQAKYQNGDNKSGNSVSLKYAKSLSDT-NNLQLLSYRYQSEGYVDFADF------YPTD 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 482 AWHE---KQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNN-----NYMLSFNKVfslgdlqGLSASVSFARNQYTGGG 553
Cdd:PRK15213 461 LYTRsntKRRYEDIFSQGLSQSLFFLSLSGWQEDYWPSSGKEtgatvSLSTTIKGV-------SVNLNGSYSKRNSLGEN 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 554 SQNqVYATISIPW--GDSRQVSY-SVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRyDTGSNSSFSGSVQsrLPWGQA 630
Cdd:PRK15213 534 DYS-ASLSISIPFtlFDKRHYSStSVSYSRSGGTGFNSGVSGSLNDRLSYGLNTNRDR-DGGRSSSLNASYG--FDRAQT 609
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 631 AADATLQPGQYRSLGLSWYGSVTAT-AHGAAFSQSMagNEPRMMIDTGDVAGVPVNGnSGVTNRFGVGVVSAgSSYRRSD 709
Cdd:PRK15213 610 NGMLSHQGGGNTSGSVSVSGSVLGTpDAGILFTRVT--GDTVAVVNVKDVPGVKFNG-SGPTDSKGNTVVPL-SSYDLNT 685
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 710 ISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSLVVSGKtGRTAGMVGDDGLAYLT 789
Cdd:PRK15213 686 VTVNAENLPLNTELTTTSQNVVPTDKAVVYREFKALKVLRYILRVKQKDGRFVPGGSWARNEQ-GTPLGFVANNGVLLMN 764
|
810 820
....*....|....*....|..
gi 340762707 790 GLSGEDRRTLNvswdgrvQCRL 811
Cdd:PRK15213 765 LLDAPGDISVG-------QCRF 779
|
|
| PRK15294 |
PRK15294 |
fimbrial outer membrane usher protein; |
30-803 |
9.37e-83 |
|
fimbrial outer membrane usher protein;
Pssm-ID: 185194 [Multi-domain] Cd Length: 845 Bit Score: 282.79 E-value: 9.37e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 30 DSGNLSNVDLTAFSREGYvAPGNYILDIWLNDQPVrEQYPVRVVPVAGLDAAVI---CVTTDMVAMLGLKDKIIHGLKpv 106
Cdd:PRK15294 40 DEPGVENVDLSVFEKGGQ-AEGTYNVDIYINNTSV-ETKNIAFKNKKSADNKLSlqpCLSVEQLKQWGVKTENFPELK-- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 107 tGIPDGqCLELRS-ADSQVRYSAENQRLTFIIPQAWMRYQDPDWIPPSRWSDGVTAGLLDYSLMVNR-YMPQQGETSTSY 184
Cdd:PRK15294 116 -NDPNG-CTDLSLlAGAVAKFNVIGNRLDLAIPQIALIADPREFVPTSEWDEGINAFLLNYSFTGSQdHDIDENRTENSE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 185 SLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFylpqTYLFRALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDER 264
Cdd:PRK15294 194 YANLRPGINIGAWRFRNYSTWNHDSDGQNSWDSAY----TYVSRDIEFLKGQLIAGENNTPADVFDSISFKGVQISSDDD 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 265 MLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDL-SQNISGNLDVSVRESDGSVRTWQVNTASVPFM 343
Cdd:PRK15294 270 MLPDSMKGFAPVIRGVAKSSAQVTVEQNGYTIYKTNVPAGPFAINDLyPTGGSGDLYVTIKESDGSEQHFIVPYASVPVL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 344 ARQGQVRYKVAAGRPLYGGTHnnsTVSPDFLLGEATWGAFNNTSLYGGLIASTGD--YQSAALGIGQNMGLLGALSADVT 421
Cdd:PRK15294 350 QREGHLKYDLTVGRTRSSDTH---SAQQNFAELTALYGLAGGITAYGGIESTLSNdvYHAALIGTGLNLGDLGALSLDVT 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 422 RSDARLPHGQKQS----GYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRaTDGGDAWHEKQSYTVTYSQSv 497
Cdd:PRK15294 427 NSWSKIKAGDVVSdtltGQSWRIRYSKDIQSTGTNFTVAGYRYSTKDYYALEDVLDTY-SDNSHYDHVRNRTDLSLSQD- 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 498 pVLNMSAALSVSRLNYWNAQSNNNYMLSFNKV-----FSLGDLQGLSASVSFARNQYTGGGSQNQVYATISIP---WGDS 569
Cdd:PRK15294 505 -IIYGSISLTLYNEDYWNDTHTTSLGIGYNNTwhnvsYGINYSYTLNADNSQDEDDDTEDSNDQQISINISIPldaFMPS 583
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 570 RQVSYSVQKDNRGGLQQTV--NYSDFHNPDTTWNISAGHNRYDTGSNSSFSGSvqsrlpWGQAAADATlqpGQY------ 641
Cdd:PRK15294 584 TYATYNMNSAKDGDTTHTVglNGTALAQKNLSWSVQEGYSSQEKATSGNVSAT------YNGTYADIN---GGYsydnhm 654
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 642 RSLGLSWYGSVTATAHGAAFSQSMagNEPRMMIDTGDVAGVPVNGNSGVTNRF-GVGVVSAGSSYRRSDISVDVAALPED 720
Cdd:PRK15294 655 RRLNYGVQGGVLLHRNGLTLSQPM--DDTIILVKAPGAAGVPVNNETGVDTDFrGYAVVPYASPYHRNEVSLDTTGIRKN 732
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 721 VDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSLVVS-GKTGRTAGMVGDDGLAYLTGLSGEDRrtL 799
Cdd:PRK15294 733 IELIDTSKTLVPTRGAVVRAEYKTNIGYKALMVLTRINNLPVPFGATVSSlTKPDNHSSFVGDAGQAWLTGLEKQGR--L 810
|
....
gi 340762707 800 NVSW 803
Cdd:PRK15294 811 LVKW 814
|
|
| PRK15217 |
PRK15217 |
fimbrial outer membrane usher protein; Provisional |
1-781 |
1.79e-81 |
|
fimbrial outer membrane usher protein; Provisional
Pssm-ID: 185139 [Multi-domain] Cd Length: 826 Bit Score: 278.97 E-value: 1.79e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 1 MKITRLAILITLTFSVLKSQATE--FNASLLdSGNLSNVDLTAFSREGYVA-PGNYILDIWLNDQpVREQYPVRVVPvag 77
Cdd:PRK15217 2 LRMTPLASAIVALLLGIEAYAAEetFDTHFM-IGGMKGQKVSNYRLDDNQPlPGQYEIDIYVNKQ-WRGKYEIIVKD--- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 78 lDAAVICVTTDMVAMLGLKdkiIHGLKPVTgipdgQCLELRSA--DSQVRYSAENQRLTFIIPQAWMRYQDPDWIPPSRW 155
Cdd:PRK15217 77 -NPQETCLSRELIKRLGIK---SDNFATEK-----QCITLKQLvqGGSYTWDIGVFRLDLSVPQAYVEELEAGYVPPENW 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 156 SDGVTAGLLDYSLMVNR-YMPQQGETSTSYSLYgTAGFNLGAWRLRSDYQYSRFDSGQGASQSDfylpQTYLFRALPALR 234
Cdd:PRK15217 148 DRGINAFYTSYYASQYYsDYKASGNSKSTYVRF-NSGLNLLGWQLHSDASFSKTDNNPGEWKSN----TLYLERGFAQLL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 235 SKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQN 314
Cdd:PRK15217 223 GTLRVGDMYTSSDIFDSVRFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAIADLQLA 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 315 ISG-NLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNStvspDFLLGEATWGAFNNTSLYGGLI 393
Cdd:PRK15217 303 GGGaDLDVSVKEADGSVTTYLVPYASVPNMLQPGVSKYDFAAGRSHIEGASKQS----DFVQAGYQYGFNNLLTLYGGTM 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 394 ASTgDYQSAALGIGQNMgLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYL- 472
Cdd:PRK15217 379 LAN-NYYAFTLGTGWNT-RIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKYLSQTSTRFGLAAWRYSSRDYRTFNDHVw 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 473 -------QRRATDGGD-------AWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWN-AQSNNNYMLSFnkvfslgdlqg 537
Cdd:PRK15217 457 annkdnyRRDENDVYDiadyyqnDFGRKNSFSANISQSLPEGWGSVSLSALWRDYWGrSGSSKDYQLSY----------- 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 538 lsaSVSFARNQYTGGGSQN-----------QVYATISIPWGDS-----RQ--VSYSVQKDNRG------GLQQTVNYSDF 593
Cdd:PRK15217 526 ---SNNWQRISYTLSASQTydenhheekrfNIFISIPFDWGDDvttprRQiyLSNSTTFDDQGfasnntGLSGTAGSRDQ 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 594 HNpdttWNISAGHNRydTGSNSSFSGSVQSRLPWGQAAADATlQPGQYRSLGLSWYGSVTATAHGAAFSQSMagNEPRMM 673
Cdd:PRK15217 603 FN----YGVNLSHQR--QGNETTAGANLTWNAPVATVNGSYS-QSSNYRQAGGSISGGLVAWSGGVNLANRL--SDTFAI 673
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 674 IDTGDVAGVPVNGNS-GVTNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLG 752
Cdd:PRK15217 674 MNAPGLEGAYVNGQKyRTTNRKGVVVYDGLTPYRENHLMLDVSQSDSETELRGNRKIAAPYRGAVVLVNFDTDQRKPWFI 753
|
810 820
....*....|....*....|....*....
gi 340762707 753 HIRLADGASPPFGSLVVSgKTGRTAGMVG 781
Cdd:PRK15217 754 KALRADGQPLTFGYEVND-IHGHNIGVVG 781
|
|
| PRK15235 |
PRK15235 |
outer membrane fimbrial usher protein SefC; Provisional |
50-806 |
2.57e-67 |
|
outer membrane fimbrial usher protein SefC; Provisional
Pssm-ID: 185150 [Multi-domain] Cd Length: 814 Bit Score: 239.25 E-value: 2.57e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 50 PGNYILDIWLNDQpVREQYPVRVVPVAglDAAVICVTTDMVAMLGLKDKIIHGLKpvtgIPDGQCLELRSADSQVRYSAE 129
Cdd:PRK15235 49 PGNYVVDVYLNNQ-LKETTELYFKSMT--QTLEPCLTKEKLIKYGIAIQELHGLQ----FDNEQCVLLEHSPLKYTYNAA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 130 NQRLTFIIPQAWMRYQDPDWIPPSRWSDGVTAGLLDYSLmvnRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFd 209
Cdd:PRK15235 122 NQSLLLNAPSKILSPIDSEIADENIWDDGINAFLLNYRA---NYLHSKVGGEDSYFGQIQPGFNFGPWRLRNLSSWQNL- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 210 sgqgASQSDFYLPQTYLFRALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTV 289
Cdd:PRK15235 198 ----SSEKKFESAYIYAERGLKKIKSKLTVGDKYTSADLFDSVPFRGFSLNKDESMIPFSQRTYYPTIRGIAKTNATVEV 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 290 SQNGRILYQTRVSPGPFE-----LPDLSQNIsGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRplYGGTh 364
Cdd:PRK15235 274 RQNGYLIYSTSVPPGQFEigreqIADLGVGV-GVLDVSIYEKNGQVQNYTVPYSTPVLSLPDGYSKYSVTIGR--YREV- 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 365 NNSTVSPDFLLGEATWGAFNNTSLYGGlIASTGDYQSAALGIGQNMGLLGALSAD----VTRSDArlphgQKQSGYSYRI 440
Cdd:PRK15235 350 NNDYIDPVFFEGTYIYGLPYGFTLFGG-VQWANIYNSYAIGASKDIGEYGALSFDwktsVSKTDT-----SNENGHAYGI 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 441 NYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGGDAWHEKQSYTVTYSQSVPVLNmSAALSVSRLNYWNAQSNN 520
Cdd:PRK15235 424 RYNKNIAQTNTEVSLASHYYYSKNYRTFSEAIHSSEHDEFYDKNKKSTTSMLLSQALGSLG-SVNLSYNYDKYWKHEGKK 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 521 NYMLSFNKvfslgDLQGLSASVSFARNQYTGGGSQNQVYA-TISIPWGDSRQVSYSVQKDNRGGLQQTVNYS-----DFH 594
Cdd:PRK15235 503 SIIASYGK-----NLNGVSLSLSYTKSTSKISEENEDLFSfLLSVPLQKLTNHEMYATYQNSSSSKHDMNHDlgitgVAF 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 595 NPDTTWNISA-----GHNRYDTGSNSSFSGSvqsrlpWGQAAADATLQPGQyRSLGLSWYGSVTATAHGAAFSQSMAgnE 669
Cdd:PRK15235 578 DSQLTWQARGqiedkSKNQKATFLNASWRGT------YGEIGANYSHNEIN-RDIGMNVSGGVIAHSSGITFGQSIS--D 648
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 670 PRMMIDTGDVAGVPVNGNSGVTNRF-GVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGE 748
Cdd:PRK15235 649 TAALVEAKGVSGAKVLGLPGVRTDFrGYTISSYLTPYMNNFISIDPTTLPINTDIRQTDIQVVPTEGAIVKAVYKTSVGT 728
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 340762707 749 QVLGHIRLADGaSPPFGSLVVSGKTG----RTAGMVGDDGLAYLTGLSGEDRrtLNVSWDGR 806
Cdd:PRK15235 729 NALIRITRTNG-KPLALGTVLSLKNNdgviQSTSIVGEDGQAYVSGLSGVQK--LIASWGNK 787
|
|
| PRK15304 |
PRK15304 |
putative fimbrial outer membrane usher protein; Provisional |
9-816 |
4.02e-45 |
|
putative fimbrial outer membrane usher protein; Provisional
Pssm-ID: 237937 [Multi-domain] Cd Length: 801 Bit Score: 174.55 E-value: 4.02e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 9 LITLTFSVLKSQATeFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPvREQYPVRVVpvaglDAAVICVTTD 88
Cdd:PRK15304 19 LPTTTFTALAAEVT-FDTDILKSRGLDPNIAHYFSRAPRFLPGSHSVMVKINGKK-RGSLAARFD-----EEGQLCVDDD 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 89 MVAMLGLKdkiihglkPVTGIPDGQCLELRSADSQ--VRYSAENQRLTFIIPQAWMryqDPDWIPPSRWSDGVTAGLLDY 166
Cdd:PRK15304 92 FLQAAGLV--------PLPISAKETCHDLQEDYPSatITPLPNQESLELVVPPEAL---DNDLLRLNNVIHGGTAALLNY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 167 SLMVNRYmpqqgETSTSYSLYGTA----GFNLGAWRLRSDYQYSRfDSGQGASQSDFylpqTYLFRALPALRSKLTLGQT 242
Cdd:PRK15304 161 SLFSSRY-----EYSGGDSDYSQAsleaGFNFADWTLRSRQFLTD-TDGEFSTDSLY----TYAQHTFTDQKTLMQVGQI 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 243 YLSSAIFDSFRFAGLTLASDERMLPPSlQGYapKISGIANSN-AQVTVSQNGRILYQTRVSPGPFELPDLsQNISGN--L 319
Cdd:PRK15304 231 NVNNSLFSGASIYGVQLMPENALQQDG-SGV--TVTGIARTSqARVEIRQSGQLIYSTLVPAGAFTLDDV-PVINGNtdL 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 320 DVSVRESDGSVRTWQVNTASVpfmaRQGQVR----YKVAAGRplyggTHNNSTVSPDFLLGEAT--WGAFNNTSLYGGLI 393
Cdd:PRK15304 307 NVTVVETDGSTSHFTVPASSF----NLNELSrpqgLTMAIGR-----VRDTDSDYSQPWVYNASdgWRLTPWMNLLAGGV 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 394 ASTgDYQsaALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRIN--YAKTFdktGSTLAFVGYRFSDrHFLSMPEY 471
Cdd:PRK15304 378 LAE-NYQ--AAGARLDWVPLPKWTVSASMLGSQDSFGDSLQGHKTELDagYSLPG---SLGLSVSTARYSD-GYRELTEA 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 472 LQRratdggDAWHEKQSYTVTYSQSVPVLNmSAALSVSRLNYWNAQSNNNY-MLSFNKVFSLgdlqglsASVSFARNQYT 550
Cdd:PRK15304 451 LDD------DYYSYKSSYSANVNWSHSLLG-TFSLGYYYNQATDGDNDSRYiNASWGKTFKY-------ASVSVNWQHAV 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 551 GGGSQNQ-----VYATISIPWGDSRQV-SYSVQKDNRG--GLQQTVNYSDfhnpDTTWNISAghNRYDTGSNSSFSGSVQ 622
Cdd:PRK15304 517 SQDDENSndddmFYVNISIPLGRSRSInAYMRNQGDKTsyGLRNMGSLSD----NTSYYVSA--DRDHDESENSFNGSLN 590
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 623 SRLPWGQAAADATLQPGQYRSLGLSWYGSVTATAHGAAFSqsmagnePRMMIDT-------GDVAGVPVNGNSGV--TNR 693
Cdd:PRK15304 591 SNLHYTQLSVGAGTDGDDNRNYNATLSGGIAAHDQGVTFS-------PYTIKDTfaiarldEPVAGVEIATPQGPvwTDF 663
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 694 FGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGSLVVSGKt 773
Cdd:PRK15304 664 WGQAVIPGLTEWRKSRVEVNTNTLPKNMDLANGTKMIKAAHGAVSKVDFSVLNQRRVMLNVKRADGSPLPKGVSIVDEK- 742
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 340762707 774 GRTAGMVGDDGLAYLTGLSgEDRRTLNVSWDGRVQCRL--TLPET 816
Cdd:PRK15304 743 GNYLTSAVDDGRVFLNDID-DIPALYAKDDDMNRLCRIhyTLPED 786
|
|
| PapC_N |
pfam13954 |
PapC N-terminal domain; The PapC N-terminal domain is a structural domain found at the ... |
23-168 |
1.51e-43 |
|
PapC N-terminal domain; The PapC N-terminal domain is a structural domain found at the N-terminus of the E. coli PapC protein. Pili are assembled using the chaperone usher system. In E.coli this is composed of the chaperone PapD and the usher PapC. This domain represents the N-terminal domain from PapC and its homologs. This domain is involved in substrate binding.
Pssm-ID: 433603 [Multi-domain] Cd Length: 146 Bit Score: 154.31 E-value: 1.51e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340762707 23 EFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQyPVRVVPVAGLDAAVICVTTDMVAMLGLKdkiIHG 102
Cdd:pfam13954 1 EFNPDFLDGSGAAGVDLSRFSRGNYVLPGTYRVDVYVNGRWIGRQ-DVRFVADPGDGGLEPCLTPELLEQLGVK---TDK 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 340762707 103 LKPVTGIPDGQCLELRSA--DSQVRYSAENQRLTFIIPQAWMRYQDPDWIPPSRWSDGVTAGLLDYSL 168
Cdd:pfam13954 77 LPALADAQLGACVDLAALipGASARFDFAQQRLDLSIPQAYLRRSARGYVPPSLWDDGIPAALLNYNA 144
|
|
| PapC_C |
pfam13953 |
PapC C-terminal domain; The PapC C-terminal domain is a structural domain found at the ... |
753-815 |
3.39e-11 |
|
PapC C-terminal domain; The PapC C-terminal domain is a structural domain found at the C-terminus of the E. coli PapC protein. Pili are assembled using the chaperone usher system. In E.coli this is composed of the chaperone PapD and the usher PapC. This domain represents the C-terminal domain from PapC and its homologs. This domain has a beta-sandwich structure similar to the plug domain of PapC.
Pssm-ID: 464055 [Multi-domain] Cd Length: 66 Bit Score: 59.15 E-value: 3.39e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 340762707 753 HIRLADGASPPFGSLVVSGKTGRTaGMVGDDGLAYLTGLsgEDRRTLNVSWDGR--VQCRL--TLPE 815
Cdd:pfam13953 3 TLTDADGKPLPFGATVTDEGGGQS-GIVGQDGQVYLRGL--PDQGRLRVKWGDGagQQCRAsyTLPE 66
|
|
| |
