|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-601 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 844.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSQPLWTWMSVGNFNIGFNLV 80
Cdd:PRK06590 2 MNLLWLIVLLPLIGALILGLFGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFSQTLWTWISVGDFDVDFGLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSD 160
Cdd:PRK06590 82 VDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 161 PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLA 240
Cdd:PRK06590 162 PSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 241 DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMF 320
Cdd:PRK06590 242 DAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 321 LALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLvTAGFFSKD 400
Cdd:PRK06590 322 LALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPP-FAGFFSKD 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 401 EILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGK--EQIHAHAGKGITHHLPLIVLMILSTFVGALIVPPLQGV 478
Cdd:PRK06590 401 EILEAAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKekEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPPFLGV 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 479 LPQTTELAHGRV-----MTLEITSGVVAIAGILIAAWLWLGKRTLVTSIAnsAPGRLLGTWWYNAWGFDWLYDKVFVKPF 553
Cdd:PRK06590 481 LPLTTELAHGEAehhlpVWVALLPLVVALAGIALAWLLYLKKPTLPTSIA--APGRFLYTLLRNKYYFDELYEKVFVKPG 558
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 340763703 554 LGIAWLLKRDPLNALM----NIPAILSRFAGKGLVLSENGYLRWYVASMSIG 601
Cdd:PRK06590 559 LALARLLWKDGDDGIIdglvPNSARLVGGGSRVLRRLQTGYLRHYAASMLIG 610
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
2-601 |
0e+00 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 767.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 2 NMLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGMDFFANG-KQAFSQPLWTWMSVGNFNIGFNLV 80
Cdd:TIGR01974 1 NLIFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGeGEAFTQSLFPWISVGGFQVDFGLR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSD 160
Cdd:TIGR01974 81 LDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 161 PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFadgNNMLMWATLMLLGGAVGKSAQLPLQTWLA 240
Cdd:TIGR01974 161 PSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAF---FSALTLICLLLFIGAMGKSAQLPLHTWLP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 241 DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMF 320
Cdd:TIGR01974 238 DAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMF 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 321 LALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPlVTAGFFSKD 400
Cdd:TIGR01974 318 LALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFP-GFAGFFSKD 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 401 EILAGAMANG-HINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHA---GKGITHHLPLIVLMILSTFVGALIVP--- 473
Cdd:TIGR01974 397 LILEAAFASGtHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAhphESPLVMLLPLIVLAVGSVFAGFFIVPlfe 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 474 PLQGVLPQTTELA--HGRVMTLEITSG-VVAIAGILIAAWLWLGKRTLVTSIANSapGRLLGTWWYNAWGFDWLYDKVFV 550
Cdd:TIGR01974 477 FLKGVLPTSAEPAleHHHVPALEIWSPtAVAILGILLAYLLYLGNPTLPAKIAQR--HSGLYRLLLNKWYFDELYDKVFV 554
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 340763703 551 KPFLGIAWLLKRDPLNALMNIP----AILSRFAGKGLVLSENGYLRWYVASMSIG 601
Cdd:TIGR01974 555 KPYLFLGKLLWKDPDDKIIDGFgpgiARLVGAISKRLRKSQTGYLRWYAASMVVG 609
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-601 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 630.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGMDFFAngkQAFSQPLWTWMSVGNFNIGFNLV 80
Cdd:COG1009 1 LQLLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVLG---GEVVVELYTWIPVGSLGLDFGFR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSD 160
Cdd:COG1009 78 LDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 161 PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGnnMLMWATLMLLGGAVGKSAQLPLQTWLA 240
Cdd:COG1009 158 PSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSP--LLTLILLLLLLGAFGKSAQFPLHFWLP 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 241 DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMF 320
Cdd:COG1009 236 DAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMF 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 321 LALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAChHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLvTAGFFSKD 400
Cdd:COG1009 316 LALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP-FAGFFSKE 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 401 EILAGAMANGHIN--LMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGK---GITHHLPLIVLMILSTFVGALIVPPL 475
Cdd:COG1009 394 AILEAALEAGGLGplLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPhesPWLMTLPLVVLAVLSLVLGLLLPGLL 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 476 QGVLPQTT------ELAHGRVMTLeiTSGVVAIAGILIAAWLWLGKRtlvtSIANSAPGRLLGTWWYNAWGFDWLYDKVF 549
Cdd:COG1009 474 EGLLAPAAvlggelHLAHGLLLNA--LPLLLSLLGIALGYLLYLKRP----LPALAERLKPLYRLLANKWYFDELYDALF 547
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 340763703 550 VKPFLGIAWLLK--RDPLNALMNIPAILSRFAGKGLVLSENGYLRWYVASMSIG 601
Cdd:COG1009 548 VKPVRALARFLWfdRYVIDGIVNGLARLTLFSGRLLRRLQTGYLQFYALTILLG 601
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
9-551 |
1.07e-121 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 375.13 E-value: 1.07e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 9 ILPLIGFVLLAF---SRGRWSENLSATIGVGSVGL--AALVTAFVGMDFFANGKQAFSQpLWTWMSVGNFNIGFNLVLDG 83
Cdd:PRK07376 13 VLPLLGAVLVGLgliSFNQTTNRLRQPVAVLLISLvgAAAVLSYALLWSQIQGHEPYER-LFEWASAGDFHLPMGYVIDP 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 84 LSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPKN 163
Cdd:PRK07376 92 LGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 164 GAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLL---GGAVGKSAQLPLQTWLA 240
Cdd:PRK07376 172 ADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCIlvfLGPMAKSAQFPLHVWLP 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 241 DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMF 320
Cdd:PRK07376 252 DAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMV 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 321 LALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACH----HE----QNIFKMGGLRKSIPLVYACFLVGGAALSALPLV 392
Cdd:PRK07376 332 MAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEevvgHDpvlaQDMRLMGGLRKYMPITAITFLIGCLAISGIPPF 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 393 tAGFFSKDEILaGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHG---------KEQIHAHAGKGITHH--------- 454
Cdd:PRK07376 412 -AGFWSKDEIL-GAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGefrgndkelQKELLAAADAPGHHEghheehgeh 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 455 ---------------LPLIVLMILSTFVG-----------ALIVPPLQGVlpqttELAH----GRVMTLEITSGVVAIAG 504
Cdd:PRK07376 490 hhhsgsphespwtmtLPLVVLAVPSVLIGllgtpwnnrfeAFLHAPGEAL-----EAAAhfewGEFLILAGASVGIALIG 564
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 340763703 505 ILIAAWLWLGKRTLVTSIANSAPGrlLGTWWYNAWGFDWLYDKVFVK 551
Cdd:PRK07376 565 ITLASLMYLLKKIDPAAIAERFPP--LYQFSLNKWYLDDIYEKLFVK 609
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
3-551 |
6.30e-119 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 365.94 E-value: 6.30e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 3 MLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSQpLWTWMSVGNFNIGFNLVLD 82
Cdd:MTH00020 1 MYLLVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIK-LWRWLDSDLLTVYFGLQFD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 83 GLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPK 162
Cdd:MTH00020 80 GLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 163 NGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGnnmLMWATLMLLGGAVGKSAQLPLQTWLADA 242
Cdd:MTH00020 160 ANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSSD---ITLICLFLFIGAVGKSAQLGLHTWLPDA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 243 MAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLA 322
Cdd:MTH00020 237 MEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 323 LGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLVTaGFFSKDEI 402
Cdd:MTH00020 317 CGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLT-GFYSKDLI 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 403 LAGAMANGHINLMV-AGLVGAFMTSLYTFRMIFIVFHGKEQ------IHAHAGKGIThHLPLIVLMILSTFVGAL---IV 472
Cdd:MTH00020 396 LELAFGQYYLIFAYwLGCFSALLTAFYSIRLIYLTFLSNTNlkkavfFHLHEGDWNL-LLPLGILALGSIFVGYLakeMI 474
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 340763703 473 PPLQGVLPQTTELahgrvmTLEITSGVVAIAGILIAAWLWLGKRTLVtSIANSAPGRLLGTWWYNAWGFDWLYDKVFVK 551
Cdd:MTH00020 475 WSFQITLPPIVPL------SIKLLPVFLSLGGIGLVIILYFYSSKTF-RVPFSFIGRNSYTFLGSAWQFNYILNYFLIK 546
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
64-470 |
5.59e-112 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 348.15 E-value: 5.59e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 64 LWTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGW 143
Cdd:MTH00210 61 LWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGW 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 144 EGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELApAHFADGNNMLMwATLMLL 223
Cdd:MTH00210 141 EGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLL-VTNINKESLTI-ICLLLF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 224 GGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTD 303
Cdd:MTH00210 219 IGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQND 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 304 IKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGG 383
Cdd:MTH00210 299 LKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGS 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 384 AALSALPLVTaGFFSKDEILagAMANGHINLMVA---GLVGAFMTSLYTFRMIFIVF----HGKEQIHAHAGKG---ITh 453
Cdd:MTH00210 379 LSLMGFPYLT-GFYSKDLIL--ELTYDKYYIAFAywlGSFSALLTAFYSIRLIYLTFitntNSKKEVFIGVHESswnIT- 454
|
410
....*....|....*..
gi 340763703 454 hLPLIVLMILSTFVGAL 470
Cdd:MTH00210 455 -FPLLLLAFGSIFVGYL 470
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
62-444 |
3.95e-109 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 344.57 E-value: 3.95e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 62 QPLWTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYL 141
Cdd:CHL00025 70 QYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 142 GWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATL- 220
Cdd:CHL00025 150 FWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLc 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 221 --MLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAA 298
Cdd:CHL00025 230 afLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 299 LVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVIlachH------------EQNIFKMG 366
Cdd:CHL00025 310 LAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVI----HsmepivgyspdkSQNMVLMG 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 367 GLRKSIPLVYACFLVGGAALSALPLVtAGFFSKDEILAGAMAN----GHINLMVAGLvgafmTSLYTFRMIFIVFHGKEQ 442
Cdd:CHL00025 386 GLRKYMPITKTTFLLGTLSLCGIPPL-ACFWSKDEILNDSWLYspifAIIAWSTAGL-----TAFYMFRIYLLTFEGHLR 459
|
..
gi 340763703 443 IH 444
Cdd:CHL00025 460 VH 461
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-515 |
1.51e-97 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 309.96 E-value: 1.51e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIGFVLLAFSRGRWSENLSATigvgSVGLAALVTAFVGMdFFANGKQAFSQPLWTWMSVGNFNIGFNLV 80
Cdd:MTH00211 2 NTIFNSGFLLILILLLLPLLLPLNNSKLHIKK----AVKLSFFISLIPLL-IFLDQGLETILTNWSWINLGLFSLNLSFK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSD 160
Cdd:MTH00211 77 FDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 161 PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELapahfadgNNMLMWATLMLLGGAVGKSAQLPLQTWLA 240
Cdd:MTH00211 157 SDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFIL--------NLDLTLFLLGLLLAAMGKSAQFGFHPWLP 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 241 DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMF 320
Cdd:MTH00211 229 SAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMM 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 321 LALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLVtAGFFSKD 400
Cdd:MTH00211 309 VTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFL-SGFFSKD 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 401 EILAgAMANGHIN--LMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGK---GITHHLPLIVLMILSTFVGALIVPPL 475
Cdd:MTH00211 388 LILE-SMNGSYLNawALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPInenYKLLKNPLKRLALGSILAGFIITSNL 466
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 340763703 476 QGVLPQTTELahgrVMTLEITSGVVAIAGILIAAWLWLGK 515
Cdd:MTH00211 467 PPEKPEILSL----PFLLKLMPLLVTIVGLLLGLELVNLT 502
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
65-508 |
9.22e-89 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 287.06 E-value: 9.22e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMveLAPAHfadgNNMLMwaTLMLLG 224
Cdd:MTH00004 146 GVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQL--FSPTQ----TPTLP--LLGLIL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 225 GAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDI 304
Cdd:MTH00004 218 AATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 305 KRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGA 384
Cdd:MTH00004 298 KKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 385 ALSALPLVtAGFFSKDEILAgAMANGHIN----LMVagLVGAFMTSLYTFRMIFIVFHGKEQIH-----AHAGKGITHhl 455
Cdd:MTH00004 378 ALMGTPFL-SGFYSKDTIIE-TLNTSYLNawalLLT--LLATSFTAAYSLRMILLVQTGFPRTPpttpiNENTPTIIN-- 451
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 340763703 456 PLIVLMILSTFVGALI-VPPLQGVLPQTTelahgRVMTLEITSGVVAIAGILIA 508
Cdd:MTH00004 452 PITRLALGSILAGLLIsSTILPTKTPPMT-----MPTTTKLAALIVTILGILLA 500
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
65-434 |
4.35e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 285.26 E-value: 4.35e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAhfadgnnmlmwATLMLLG 224
Cdd:MTH00066 144 GVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN-----------STLPLLG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 225 ---GAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQ 301
Cdd:MTH00066 213 lilAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 302 TDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLV 381
Cdd:MTH00066 293 NDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTI 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 340763703 382 GGAALSALPLVtAGFFSKDEILAgAMANGHINLM--VAGLVGAFMTSLYTFRMIF 434
Cdd:MTH00066 373 GSLALTGTPFL-AGFFSKDAIIE-AMNTSNLNSWalILTLIATSFTAVYSFRIIY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
133-422 |
4.00e-84 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 264.95 E-value: 4.00e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 133 SDNLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELapAHFADGN 212
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKA--LTGGLNS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 213 NMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIhAATMVTAGVYLIARTHGLFL-MTPEILHLVGIIGAIT 290
Cdd:pfam00361 79 SGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpSSPFIQQILLILAIIS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 291 LVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV---QAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGG 367
Cdd:pfam00361 158 MLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAgtiYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGG 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 340763703 368 LRKSIPLVYACFLVGGAALSALPLvTAGFFSKDEILAGAMANGHINLMVAGLVGA 422
Cdd:pfam00361 238 LAKTMPILALVFLVAMLSLAGLPP-TAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
3-480 |
9.15e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 276.07 E-value: 9.15e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 3 MLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSQpLWTWMSVGNFNIGFNLVLD 82
Cdd:MTH00032 1 MYLLVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEVLINDAVVHIE-LYKWIESEIFITHIGLLYD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 83 GLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPK 162
Cdd:MTH00032 80 TLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQ 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 163 NGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFRE----------MVELAPAHFADGNNMLMWATL--MLLGGAVGKS 230
Cdd:MTH00032 160 ANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTfnggsvgsgiMDRGYYGGGAYESPLAPFAIIgiLLLIGCIGKS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 231 AQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAY 310
Cdd:MTH00032 240 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAY 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 311 STMSQIGYMFLALGVQ-AWDAAIFHLMTHAFFKALLFLASGSVILACHH-EQNIFKMGGLRKSIPLVYACFLVGGAALSA 388
Cdd:MTH00032 320 STCSQLGYMVLIIGIEgSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdEQDMRKMGGLIHSIPFTYTMMLIGSFSIMG 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 389 LPLVTaGFFSKDEILA-------GAMANGHINLMVAGLVG------------------------------AFMTSLYTFR 431
Cdd:MTH00032 400 LPYLT-GFYSKDLILEltysgrnMGIPFGSSLLKIQGDIGikkddrgsiggpegypsrgsafafwlgtvaALLTAFYSIR 478
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 432 MIFIVF-----HGKEQ-IHAHAgkGITHHLPLIVLMIL---STFVGAL------------IVPPLQGVLP 480
Cdd:MTH00032 479 LVYITFiispnSPKESlISSHI--NIVDKRVLTVLSLLcfgAIFVGYLiqdiligdiehpIVPPLIKVMP 546
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
30-437 |
7.84e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 272.23 E-value: 7.84e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 30 SATIGVGSVGLAALVTAFVGMDFFANGKQAFSQPLWTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRG 109
Cdd:MTH00208 54 NSNFSISLLKTLAFLSLINLLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 110 EEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGD----VFLAFAL 185
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDigiiLFLSLSL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 186 fILYNelgTLNFREMVELAPAHFADGNNMLMWATLmllgGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYL 265
Cdd:MTH00208 214 -INFN---SWNLNEILSLNNSNSFLINILLFGILL----AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 266 IARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALL 345
Cdd:MTH00208 286 LIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAML 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 346 FLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLVtAGFFSKDEIL-AGAMANGHINLMVAGLVGAFM 424
Cdd:MTH00208 366 FLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFL-AGFYSKDLILeAGLASISNLLSIILALIATLL 444
|
410
....*....|...
gi 340763703 425 TSLYTFRMIFIVF 437
Cdd:MTH00208 445 TAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
65-515 |
8.03e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 262.47 E-value: 8.03e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:MTH00151 36 WELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWD 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIgFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNeLGTLNFREMvelapahfaDGNNMLMWATLMLLG 224
Cdd:MTH00151 116 GLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVL-LGHWSILSM---------WDFKLSGWLGLLLVL 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 225 GAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDI 304
Cdd:MTH00151 185 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDL 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 305 KRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGA 384
Cdd:MTH00151 265 KKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSL 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 385 ALSALPLvTAGFFSKDEILAGAMANGhINL--MVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGKG---ITHHLPLIV 459
Cdd:MTH00151 345 SLCGAPF-LSGFYSKDLILESSLMSP-TSLlmVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSdedFYVSLPMLL 422
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 340763703 460 LMILSTFVGALivppLQGVLPQTTELAHGRVMtLEITSGVVAIAGILIAAWLWLGK 515
Cdd:MTH00151 423 LSLGALIGGKL----LQSLFEGFSEEFFLPSY-LKLLIGFVILLGLFLSFGFWDSG 473
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
65-436 |
3.35e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 262.08 E-value: 3.35e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:MTH00137 70 WNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFAL-FILYNelgtLNFREMVELapahFADGNNMLMwaTLMLL 223
Cdd:MTH00137 150 GVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMaWMATN----LNSWEIQQI----FALSKDFDL--TLPLL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 224 G---GAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALV 300
Cdd:MTH00137 220 GlilAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALT 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 301 QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFL 380
Cdd:MTH00137 300 QNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLT 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 340763703 381 VGGAALSALPLVtAGFFSKDEILAgAMANGHIN---LMVAGLVGAFmTSLYTFRMIFIV 436
Cdd:MTH00137 380 IGSLALTGTPFL-AGFFSKDAIIE-ALNTSHLNawaLTLTLIATSF-TAVYSLRVVFFV 435
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
65-508 |
1.71e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 260.17 E-value: 1.71e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDV--FLAFALFILYNelGTLNFREMvelapahFADGNNMLMWATLML 222
Cdd:MTH00108 146 GVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIgfILAMAWFLLNL--NSWDLQQI-------FMLNPNNSNLPLMGL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 223 LGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQT 302
Cdd:MTH00108 217 LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQN 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 303 DIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVG 382
Cdd:MTH00108 297 DIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIG 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 383 GAALSALPLVTaGFFSKDEILAgAMANGHIN---LMVAgLVGAFMTSLYTFRMIFIVFHGKEQIHAHAgkGITHHLPLIV 459
Cdd:MTH00108 377 SLALTGMPFLT-GFYSKDLIIE-AANTSYTNawaLLIT-LIATSLTAAYSTRIIFFALLGQPRFPPLI--TINENNPLLI 451
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 340763703 460 -----LMILSTFVGALI---VPPLQgvLPQTTELAHGRVMTLEITsgvvaIAGILIA 508
Cdd:MTH00108 452 npikrLLLGSIFAGFLIsnnIPPTT--IPQMTMPLYLKLTALAVT-----ILGFILA 501
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
65-471 |
3.65e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 258.53 E-value: 3.65e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:MTH00165 36 WELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWD 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIgFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNeLGTLNFREMVElapahFADGNNMLMWATLMLLG 224
Cdd:MTH00165 116 GLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN-FGSWNFIFYLD-----FMKNSFEMLLIGLLIML 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 225 GAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTpEILHLVGIIGAITLVMAGFAALVQTDI 304
Cdd:MTH00165 189 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS-FFSKFLLLISLLTMFMAGLGANFEFDL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 305 KRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGA 384
Cdd:MTH00165 268 KKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 385 ALSALPLvTAGFFSKDEILAGAMANGhINLMVAGL--VGAFMTSLYTFRMIFIVFHGKEQIHA-----HAGKGIThhLPL 457
Cdd:MTH00165 348 SLCGFPF-LSGFYSKDLILEMVSMSN-LNFFIFFLffFSTGLTVSYSFRLIYYSMSGDFNLKSlnnlsDESKFML--KSM 423
|
410
....*....|....
gi 340763703 458 IVLMILSTFVGALI 471
Cdd:MTH00165 424 ILLLFMSIFGGSML 437
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
1-464 |
1.76e-75 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 248.74 E-value: 1.76e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIGFVLLAFSRGRWSENLsatiGVGSVGLAALVTAFVGMDFFANGKQAFSQPLWTWMSVGNFNigfnLV 80
Cdd:PRK06525 1 ENLALLTLLLPFIGALVVFFLPGRRAAEL----GVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVALFG----LV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIHMFASWYMR-------GEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLL 153
Cdd:PRK06525 73 IDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWAL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 154 IGfYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAhfadgnnMLMWATLMLLGGAVGKSAQL 233
Cdd:PRK06525 153 IS-YYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS-------LKYLVFLGILFAAWGKSAQL 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 234 PLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVG-IIGAITLVMAGFAALVQTDIKRVLAYST 312
Cdd:PRK06525 225 PFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGaVMAIVTLLYGFLMYLPQQDMKRLLAYST 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 313 MSQIGYMFLALGV------QAWDAAIFHLMTHAFFKALLFLASGSVILAChHEQNIFKMGGLRKSIPLVYACFLVGGAAL 386
Cdd:PRK06525 305 ITQLGYMFFGLSLailgsrLALEGSIAYIFNHAFAKSLFFLVAGALSYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAI 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 387 SALPLVtAGFFSKDEILAGAMANGHIN--------LMVAGLVGAFMTSLYTFRMifIVFHGKEQIHAHAGK-GITHHLPL 457
Cdd:PRK06525 384 TGVPPF-NGFFSKFPIFAAGFELSVEYwillpamvLLLIESVASFAWFLRWFGR--VVFGEPSEAVADAAPlPGSMKLVL 460
|
....*..
gi 340763703 458 IVLMILS 464
Cdd:PRK06525 461 IVLIVMS 467
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-436 |
2.13e-75 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 246.98 E-value: 2.13e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 2 NMLALTIILPLIGFVLLAFSRGRwsENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSQPLWTWmsvgnfNIGFNLVL 81
Cdd:COG0651 3 HLLILPVLLPLLAAALLLLLGRR--RRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWPA------PFGIVLVA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 82 DGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFyYSDP 161
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL-GGTK 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 162 KNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHfadGNNMLMWATLMLLGGAVGKSAQLPLQTWLAD 241
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL---DPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 242 AMA-GPTPVSALIHAAtMVTAGVYLIARTHGLFL---MTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIG 317
Cdd:COG0651 231 AYPaAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 318 YMFLALGV---QAWDAAIFHLMTHAFFKALLFLASGSVILACHHeQNIFKMGGLRKSIPLVYACFLVGGAALSALPLvTA 394
Cdd:COG0651 310 YILLGLGLgtpLGLAGALFHLLNHALAKALLFLAAGAIERATGT-RDLDKLGGLGKRMPLTAAAFLIGALALAGLPP-LS 387
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 340763703 395 GFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIV 436
Cdd:COG0651 388 GFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
65-440 |
5.39e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 244.55 E-value: 5.39e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:MTH00209 34 WELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWD 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIgFYYSDPKNGAAAMKAFVVTRVGDvflafALFILY----NELGTLNFremvelapAHFADGNNMLMWATL 220
Cdd:MTH00209 114 GLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGD-----ALLILSiawmLMHGNWNI--------FYLNFNSNLGSVISV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 221 MLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALV 300
Cdd:MTH00209 180 LIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANV 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 301 QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFL 380
Cdd:MTH00209 260 ESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLN 339
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 340763703 381 VGGAALSALPLVtAGFFSKDEILAGAMANG-HINLMVAGLVGAFMTSLYTFRMIFIVFHGK 440
Cdd:MTH00209 340 IANLSLCGIPFL-AGFYSKDLILESMLESNmPIMTLILMFLSTSLTAAYSMRLSYFSLWGP 399
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
65-596 |
3.20e-69 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 238.67 E-value: 3.20e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWmsVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:PRK12647 48 YAW--VPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMveLAPAHFADGNNMLMWATLMLLG 224
Cdd:PRK12647 126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSEL--LASGDVIREHPLYLAILLLVLG 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 225 GAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDI 304
Cdd:PRK12647 204 GAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 305 KRVLAYSTMSQIG--YMFLALGVQ-AWDAAIFHLMTHAFFKALLFLASGSVilacHHE---QNIFKMGGLRKSIPLVYAC 378
Cdd:PRK12647 284 KLILAYSTVSALGtlVMLLGLGSElAIKAAVLFLVAHSLYKGALFMVAGII----DHEtgtRDITKLGGLRRAMPITAAA 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 379 FLVGGAALSALPlVTAGFFSKDEILAGamanghinLMVAGLVGAFMTslytfrmIFIVFHGkeqihahagkgithhlpli 458
Cdd:PRK12647 360 ALLAALSMAGLP-PLFGFLAKELIYEA--------LLEAPLWSLILT-------VAAVLGN------------------- 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 459 VLMILSTFVGALivPPLQGVLPQTTELAHGRVMTLEITSGVVAIAGILIAAWLWLGKRTLVTSIANSAPGRLLGTWWYNA 538
Cdd:PRK12647 405 ALMVAVAFLVGI--KPFLGKLVETPKHPHEAPVLMWLGPAVLAVLGLLFGLFPFFFHAALLSPAASAVLGEPVEVKLALW 482
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 340763703 539 WGFDWLYDKVFVKPFLGIAWLLKRDPLNALM----------------NIPAILSRFAGKGLVLSENGYLRWYVA 596
Cdd:PRK12647 483 HGFNLPLLLSLLTLLLGIGLYLLRARLRAAMaaldraagigpdrgydRFMDGLVRVAEWQTRVLQNGRLRNYLT 556
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
65-471 |
1.81e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 230.04 E-value: 1.81e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:MTH00207 39 WEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWD 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIgFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNElGTLNFREMVElapahfadgNNMLMWATLMLLG 224
Cdd:MTH00207 119 GLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQ-GHWSITNMWQ---------TDMNNYIALSIMI 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 225 GAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIAR----THGLFLMTPEILhlvgIIGAITLVMAGFAALV 300
Cdd:MTH00207 188 AAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRfypfLSSTYWFNPALL----LTASLTMLMAGLSAMT 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 301 QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFL 380
Cdd:MTH00207 264 ECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 381 VGGAALSALPLVtAGFFSKDEILAGAMANGHINLMVAGLVGAFM-TSLYTFRMIFIVFHGKEQ---IHAHAGKGITHHLP 456
Cdd:MTH00207 344 IANLALCGSPFL-SGFYSKDLILESSLFYPHNSLMILMIFLATAlTAAYSTRFTLAVLWSPNSsspYHHLEDEDKSLTTP 422
|
410
....*....|....*
gi 340763703 457 LIVLMILSTFVGALI 471
Cdd:MTH00207 423 MLLLTLGAITSGSAL 437
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
62-601 |
2.95e-64 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 222.48 E-value: 2.95e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 62 QPLWTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYL 141
Cdd:PRK07390 68 QLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 142 GWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNnmlmWATLM 221
Cdd:PRK07390 148 LLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANLDPL----TATLL 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 222 ---LLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAAtMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAA 298
Cdd:PRK07390 224 glaLIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 299 LVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAChHEQNIFKMGGLRKSIPLVYAC 378
Cdd:PRK07390 303 IAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTT-ITQDLTELGGLWSRMPATTLA 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 379 FLVGGAALSALPLVtAGFFSKDEILAGAMANGHINLMVAGLVGAFmTSLYTFRMIFIVFHGKEQIHAH--AGKGITHHLP 456
Cdd:PRK07390 382 FLVGSAGLVALLPL-GGFWALLRLADGLWAVSPWLVGVLLLVNAL-TAFNLTRVFRLVFLGKPQQKTRrsPEVLWPMALP 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 457 LIVLMILstfvgALIVP--PLQ-GVLPQTTELAHGrVMTLEITSGVVaiaGILIAAWLWLGKrtlvtsiANSAPGRLLGT 533
Cdd:PRK07390 460 MVILAGF-----TLHLPllLQQwGLLPSWEALNLW-AAPLLVASGLL---GVLLGAWIYLNK-------AWSRPIQLPLR 523
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 340763703 534 WWYNAWGFDWLYDKVF-------VKPFLGIAWLLKRDPLNALMNIPAILSRFAGKGLVLSENGYLRWYVASMSIG 601
Cdd:PRK07390 524 FLQDLLAYDFYTDRLYrltivfvVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKYSVSGQSQFYVLTILLG 598
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
73-544 |
7.88e-62 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 219.03 E-value: 7.88e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 73 FNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYM-RGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSY 151
Cdd:PRK12645 68 LGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLsKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 152 LLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAhfADGNNMLMWATLMLLGGAVGKSA 231
Cdd:PRK12645 148 LLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADE--IQNSPLFIPAMILILLGAFTKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 232 QLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYS 311
Cdd:PRK12645 226 QFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 312 TMSQIGYMFLALGV----------------QAWDAAIFHLMTHAFFKALLFLASGSVilacHHE---QNIFKMGGLRKSI 372
Cdd:PRK12645 306 TVSQLGLIMSLLGIgaaslhyqgddskiyaAAITAAIFHLINHATFKGSLFMIVGIV----DHEtgtRDIRKLGGLMTIM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 373 PLVYACFLVGGAALSALPLVTaGFFSKDEILAGAMANGHINLM----------VAGLVGAFMTSLYTFRMIFIVFHGKEQ 442
Cdd:PRK12645 382 PITFTIALIGALSMAGLPPFN-GFLSKEMFFESMLNATEANLFsldtwgvlfpVIAWVASVFTFVYSIIFIFKTFFGKYK 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 443 IHAHAGKgiTHHLP---LIVLMILSTFV-----------GALIVPPLQGVLPQTT---------ELAHGRVMTLEITSGV 499
Cdd:PRK12645 461 PEQLPKK--AHEAPigmLISPIILASLVvvfglfpniltNSIIEPAVSAILPTLIdgedfdvhiSLWHGFTPELLMTLGI 538
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 340763703 500 VAIAGILIaawLWLGKrtlVTSIANSAPGRLLGTWWYNAwGFDWL 544
Cdd:PRK12645 539 IILGILLF---LTFSK---WVKLYQRFPKKLTLNYLYDR-SLDGL 576
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
2-443 |
1.10e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 220.45 E-value: 1.10e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 2 NMLALTIILPLIGFVLLAFSRgRWSENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSqplWTWM-SVGnfnIGFNLV 80
Cdd:PRK12648 1 MSLLLLVLLPFLGALLAALLP-RNARNAEAWLAGLVALAALVLLALLYPAVAAGEVIRAE---IEWLpALG---LNLSLR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSD 160
Cdd:PRK12648 74 LDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHR 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 161 PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMveLAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLA 240
Cdd:PRK12648 154 ADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVV--LAAGDLIRAHPLYPPALVLILLGAFTKSAQFPFHFWLP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 241 DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMF 320
Cdd:PRK12648 232 HAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLIT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 321 LALGV---QAWDAAIFHLMTHAFFKALLFLASGSVilacHHE---QNIFKMGGLRKSIPLVYACFLVGGAALSALPLVTa 394
Cdd:PRK12648 312 LLLGLgspLAAVAAIFHIINHATFKASLFMAAGII----DHEtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLN- 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 340763703 395 GFFSKDEILAGAMANG-----HINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQI 443
Cdd:PRK12648 387 GFLSKEMFFAETLDTHllgslDWLLPVAATLAGAFSVAYSLRFIHDVFFGPPPD 440
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-480 |
3.43e-59 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 211.61 E-value: 3.43e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 66 TWM-SVGnfnIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:PRK12649 65 SWLpSAG---VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLML-L 223
Cdd:PRK12649 142 LTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILiF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 224 GGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTD 303
Cdd:PRK12649 222 IGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTD 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 304 IKRVLAYSTMSQIGYMFLALGVQAWD-------AAIFHLMTHAFFKALLFLASGSVIlachHE---QNIFKMGGLRKSIP 373
Cdd:PRK12649 302 IKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVA----HEaatRDIRKLGGLRKEMP 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 374 LVYACFLVGGAALSALPLVTaGFFSKDEILAGAMANGH-------INLMVAGLVGAFMTSLYTFRMIFIVFHGkEQIHAH 446
Cdd:PRK12649 378 ITFIVASIAALAMAGIPPLN-GFLSKEMFYETSVEMGAliggpftIIIPAVAVLGGVFTFAYSIKLIDGIFLG-ERTHDH 455
|
410 420 430
....*....|....*....|....*....|....
gi 340763703 447 AGKGIthHLPLIVLMILSTFVGALIVppLQGVLP 480
Cdd:PRK12649 456 LPHHI--HEAPYVMLIPAAFLAGLVI--LFGLVP 485
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
62-509 |
1.97e-56 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 205.54 E-value: 1.97e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 62 QPLWTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMR-GEEGYSRFFAYTNLFIASMVVLVLSDNLLLMY 140
Cdd:PRK12644 53 APTEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDdDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 141 LGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFAdgnnmLMWATL 220
Cdd:PRK12644 133 VFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTGPA-----VSVAVV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 221 MLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALV 300
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALR 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 301 QTDIKRVLAYSTMSQIGYMFLALGVQAWDAA---IFHLMTHAFFKALLFLASGsVILACHHEQNIFKMGGLRKSIPLVYA 377
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAAlagLAMLLAHALFKAALFLVVG-IIDHSTGTRDIRKLSGLGRRQPVLAV 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 378 CFLVGGAALSALPLvTAGFFSK----DEILAGAMANGHINLMVAGLV-GAFMTSLYTFRMIFIVFHGKEQIHAHAGKGIT 452
Cdd:PRK12644 367 VAALAAASMAGLPP-LLGFVAKeaalEAVLHDGALGPAGPVVLAGIVlGSILTVAYSLRFLWGAFARKPGAFPSVAVTEM 445
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 340763703 453 HH------LPLIVLMILsTFVGALIVPPLQGVL-----------PQTTELA--HGRVMTLEITSGVVAIAGILIAA 509
Cdd:PRK12644 446 HRpsplflAPPAVLAVL-GLVLGLLPAPLDALLapyadtvpaagGEPYHLAlwHGFTLPLLLSAVVLAAGAALFWA 520
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
67-523 |
8.65e-55 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 199.21 E-value: 8.65e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 67 WMSVgnFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYM-RGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEG 145
Cdd:PRK12646 64 WMKT--LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 146 VGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVElaPAHFADGNNMLMWATLMLLGG 225
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILG--QADHIKNHGLFIPMIFMFLLG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 226 AVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIK 305
Cdd:PRK12646 220 AFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLK 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 306 RVLAYSTMSQIGYMFLALG-----------------VQAWDAAIFHLMTHAFFKALLFLASGSVilacHHE---QNIFKM 365
Cdd:PRK12646 300 GILAYSTISQLGMIMAMVGigggyaqhqqdaiasiyVFVLFAALFHLMNHAIFKCALFMGVGII----DHEagtRDIRIL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 366 GGLRKSIPLVYACFLVGGAALSALPLVTaGFFSKDEIL-----AGAMANGHINLMVAGLVGAFMTSLYTF----RMIFIV 436
Cdd:PRK12646 376 SGMRQLFPKMNLVMTIAALSMAGVPFLN-GFLSKEMFLdaltqTGQLSQFSLISMIIIVFIGVIASIFTFtyalYMVKEV 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 437 FHGKEQI----HAHAGKGITHHLPLIVLMIL--------STFVGALIVPPLQGVLPQTTELA---------HGRVMTLEI 495
Cdd:PRK12646 455 FWGKYDSkvftKKNIHEPWLFSLPSLILMVLvpviffvpNIFGKGIIVPALRSVSGGNHQVDqlaphvsqwHGFNIPLLL 534
|
490 500
....*....|....*....|....*...
gi 340763703 496 TSGVVAIAGILIAAWLWLGKRTLVTSIA 523
Cdd:PRK12646 535 TIIIILLGSVLAIKVDWKKVFTGKIRQI 562
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
66-437 |
8.05e-53 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 194.88 E-value: 8.05e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 66 TWMS---VGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLG 142
Cdd:PRK12650 59 TWIPdllGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVA 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 143 WEGVGLCSYLLIGfyYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVElapAHFADGNNMLMWATLML 222
Cdd:PRK12650 139 WELVSLASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILH---SDVWAEKPGLTTVVAVL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 223 LGGAV-GKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQ 301
Cdd:PRK12650 214 IAVAAfTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQK 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 302 TDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVilacHHE---QNIFKMGGLRKSIPLV 375
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGtpfALTAAVVHTLAHALFKSSLFMLIGVV----DHQagtRDIRRLGSLWRRMPFT 369
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 340763703 376 YACFLVGGAALSALPLvTAGFFSKDEILAGAM-----ANGHINLMVAGLVGAFMTSLYTFRMIFIVF 437
Cdd:PRK12650 370 FVSVTIAALSMAAVPP-LFGFVSKEGMLTAFLeapggNAGVVLLLVGAALGAVFTFAYSARLVLGAF 435
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-468 |
1.19e-50 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 182.20 E-value: 1.19e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIGFVLLAFSRgRWSENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSQPLWTWMSvgNFNIGFNLV 80
Cdd:COG1008 3 MPLLSLLILLPLLGALLLLLLP-RRNARLARWVALAVSLLTLLLSLYLLAGFDPGTGGFQFVESYPWIP--SLGISYHLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIhMFASWYmRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYySD 160
Cdd:COG1008 80 VDGISLPLVLLTALLTPLA-ILASWN-EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW-GG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 161 PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFrEMVELAPAHFADGNNMLMWAtLMLLGGAVgKSAQLPLQTWLA 240
Cdd:COG1008 157 ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-AFFIAFAV-KVPMFPFHTWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 241 DAMA-GPTPVSAlIHAATMVTAGVYLIARThgLFLMTPEILH----LVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQ 315
Cdd:COG1008 234 DAHVeAPTAGSV-LLAGVLLKMGGYGLLRF--ALPLFPEASAyfapLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 316 IGYMFLALG---VQAWDAAIFHLMTHAFFKALLFLASGsVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLv 392
Cdd:COG1008 311 MGFVLLGIFalnPLGLQGAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPG- 388
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 340763703 393 TAGFFSKDEILAGAMANGHInLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGKGIT--HHLPLIVLMILSTFVG 468
Cdd:COG1008 389 TSGFVGEFLVLLGAFQVNPW-LAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNprELAVLAPLAALILLLG 465
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-476 |
5.47e-47 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 172.37 E-value: 5.47e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIGFVLLAFSRGRwsENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSqplwtwmsVGNFN--IGFN 78
Cdd:PRK08375 3 SHLLPLLVAVPLLAAALIVLLPKR--RRLRWALALLVAALTFALAISLLPQVLDGGVIAYV--------VGGWPpgIGIE 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 79 LVLDGLSLTMLSVVTGVGFlihmFASWYMRG--EEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGF 156
Cdd:PRK08375 73 LRADSLSALFLLVTSILAI----AALLYAIGygEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 157 YySDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPahfadGNNMLMWATLMLLGGAVGKSAQLPLQ 236
Cdd:PRK08375 149 G-GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA-----ENPTVVTAFGFVLLALALKAAVFPLH 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 237 TWLADAMAGPTPVSALIHAATMVTAGVYLIART-----HGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYS 311
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 312 TMSQIGYMFLALGVQAWD---AAIFHLMTHAFFKALLFLASGSVILAcHHEQNIFKMGGLRKSIPLVYACFLVGGAALSA 388
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLSLIG 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 389 LPLvTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGK---GITHHLPLIVLMILST 465
Cdd:PRK08375 382 VPP-TSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKqeaPLGMLAPSLALALLSL 460
|
490
....*....|.
gi 340763703 466 FVGALIVPPLQ 476
Cdd:PRK08375 461 LLGIYAGPLLQ 471
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
4-390 |
2.18e-45 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 170.84 E-value: 2.18e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 4 LALTIILPLIGFVLLAFSRGRWSENLSATIGVGS--VGLAALVTAFVGMdfFANGKQAFSQPLwtwmsvGNFNIGFNLVL 81
Cdd:PRK06521 7 LLLLSLLLYLALGLAGLLLLRRPRLAIRLSGPTGllGGLLGLASGLTAL--FAGPTLAAVLPL------GLPFLPFHLRL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 82 DGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYS--RFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYS 159
Cdd:PRK06521 79 DALSAFFLLVISLLGAAASLYSLGYFREYEGKGpgAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 160 DPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLmwatLMLLG-GAvgKSAQLPLQTW 238
Cdd:PRK06521 159 EAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLSPFWASLVFL----LALFGfGA--KAGLVPLHVW 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 239 LADAM-AGPTPVSALIhAATMVTAGVYLIARTHGLFLMTPEIL--HLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQ 315
Cdd:PRK06521 233 LPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwgVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIEN 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 316 IGYMFLALGVQ--------------AWDAAIFHLMTHAFFKALLFLASGSVILAChHEQNIFKMGGLRKSIPLVYACFLV 381
Cdd:PRK06521 312 IGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLI 390
|
....*....
gi 340763703 382 GGAALSALP 390
Cdd:PRK06521 391 GCLAISALP 399
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
73-437 |
4.21e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 167.79 E-value: 4.21e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 73 FNIGFNLVLDGLSLTMlsvvtgVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYL 152
Cdd:MTH00095 41 FNFYFNSLLFSLILLL------VTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 153 LIGFYYS-DPKNGAaaMKAFVVTRVGDVFL--AFALFILYNelgtlnfremvelapAHFADGNNMLMWATLMLLGGAVGK 229
Cdd:MTH00095 115 LVLFYNNwDSNSGA--MNTALTNRIGDFFIflFFSGFIFSS---------------YYFFSFSFFSSSMILMLLLTSFTK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 230 SAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARtHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLA 309
Cdd:MTH00095 178 SAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMN-FSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 310 YSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSAL 389
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 340763703 390 pLVTAGFFSKDEILAGAMANGH-INLMVAGLVGAFMTSLYTFRMIFIVF 437
Cdd:MTH00095 337 -MFTSGMVSKELILELFFFNNYmIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
6-353 |
8.39e-40 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 152.54 E-value: 8.39e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 6 LTIILPLIGFVLLAFSRGRWSENLSATIGVGSV----GLAALVTAFVGMDFFANGKQAFSQPLwtwmsvgnfnigfnLVL 81
Cdd:PRK08168 2 LLSVCALLPAVLMSLAAGGLLLSRWLTRALWRIaqaaSLAGLFLALLGLVLFATGAAWPAAAW--------------LEV 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 82 DGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDP 161
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 162 KNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNnmLMWATLMLLGGAVGKSAQLPLQTWLAD 241
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPS--LQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 242 AMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVgIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFL 321
Cdd:PRK08168 226 VMEAPTPVSALLHAGVVNLGGFVLIRFAPLLEQAPPARWLLV-LVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
330 340 350
....*....|....*....|....*....|..
gi 340763703 322 ALGVQAWDAAIFHLMTHAFFKALLFLASGSVI 353
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-473 |
5.34e-39 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 150.51 E-value: 5.34e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 75 IGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLI 154
Cdd:PRK12667 74 IGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 155 GFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNfreMVELAPAHFADGNNMLM-------WATLMLLGGAV 227
Cdd:PRK12667 154 AYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLN---MADLSAKIRGLSFPLTGglagnppLALGVALALAL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 228 ----GKSAQLPLQTWLADAM-AGPTPVSALIhAATMVTAGVYLIAR----THGLFLMTPEILHLVGII----GAITLVMA 294
Cdd:PRK12667 231 waftIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRflytIFGISPSLIDFRAALSPIliilGAVSAIIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 295 GFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVIlacHH--EQNIFKMGGLR 369
Cdd:PRK12667 310 ALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGtqlGLAAALFHIINHAIAKSLLFLASGVFI---HAagTRDIDELAGLG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 370 KSIPLVYACFLVGGAALSALPLVtAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIH--AHA 447
Cdd:PRK12667 387 RKMPIASFAFLIGALSLVGIPPL-NGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGeeVEH 465
|
410 420
....*....|....*....|....*.
gi 340763703 448 GKGITHHLPLIVLMILSTFVGALIVP 473
Cdd:PRK12667 466 KESPSMSVVILVLALAVLILGILALF 491
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-468 |
5.40e-38 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 147.55 E-value: 5.40e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIG-FVLLAFSR-GRWSENLSATIGVG-SVGLAALVTAFV---GMDFFANGKQAFSQPLWTWMsvGNFN 74
Cdd:PRK08376 4 EHLPPLLIIIPLFGaFSMPIVSLlGGKAREIWAVLISFlTLIVALLVFYEVwnnGTIVYVLGAESPTLTLPFGS--GGFP 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 75 IGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLI 154
Cdd:PRK08376 82 IRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 155 GFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNfreMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLP 234
Cdd:PRK08376 162 AFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN---MAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 235 LQTWLADAM-AGPTPVSALIHAATMvtAGVYLIART----HGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLA 309
Cdd:PRK08376 239 VHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARVlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 310 YSTMSQIGYMFLALGV---------------QAWDAAIFHLMTHAFFKALLFLASGSVILAChHEQNIFKMGGLRKSIPL 374
Cdd:PRK08376 317 YHSVSQIGYMLLGLGVglaalgdpamasygeIALAGGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPK 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 375 VYACFLVGGAALSALPLVTaGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTfRMIFIVFHGKEQIHAHAGK--GIT 452
Cdd:PRK08376 396 TTIAFLIGAAAIVGLPPFN-GFASKWLIYESSALFNPILGVIAMIGSVLTLASFV-KVFHTAFFGPPSEKVMNVKepPKP 473
|
490
....*....|....*.
gi 340763703 453 HHLPLIVLMILSTFVG 468
Cdd:PRK08376 474 MLVPMLILAIAIIGMG 489
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
3-468 |
6.92e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 146.41 E-value: 6.92e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 3 MLALTIILPLI-----GFVLLAFS--RGRWSENLSATIGVGSVGLAALVTAFVgmdffangkqafsqplWTWMSVGNFNI 75
Cdd:COG1007 1 SLDLLALLPEIilllgALVLLLLDlfLPRRSRRLLAGLALLGLLLALALLLLA----------------LGGGTGTAFGG 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 76 GFnlVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIAS-MVVLVLSDNLLLMYLGWEGVGLCSYLLI 154
Cdd:COG1007 65 MF--VVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLV 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 155 GFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADgNNMLMWATLMLLGGAVGKSAQLP 234
Cdd:COG1007 143 AFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGAN-SPLLLLGLVLVLAGLAFKLSAVP 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 235 LQTWLADAMAG-PTPVSALIHAATMVtAGVYLIAR--THGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYS 311
Cdd:COG1007 222 FHMWTPDVYEGaPTPVTAFLATAPKI-AAFAALLRllVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 312 TMSQIGYM---FLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSA 388
Cdd:COG1007 301 SIAHAGYLllgLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAG 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 389 LPLvTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGKGITHHLPLIVLMILSTFVG 468
Cdd:COG1007 381 IPP-TAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYFDEPEEEAPISAPPGLRVALVIAALLVLLLG 459
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-475 |
4.04e-36 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 141.61 E-value: 4.04e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFV---GMDFFANGKQAFsqplwtwmsvgnfnigf 77
Cdd:PRK06458 4 SILFALLLLIPLLASLLLFALRKRRLVATLNVLGITLTLILALWLVFTvpdAGEIFAAGLWFF----------------- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 78 nlvLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSR--------FFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLC 149
Cdd:PRK06458 67 ---IDDLNVFFLALIGVVGFLTSLYSIGYMRHEVEHGElspvtlrlYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 150 SYLLIGFYYSdPKNGAAAMKAFVVTRVGdvfLAFALF---ILYNELGTLNFREMVELA----PAHFADGNNMLM-WATLM 221
Cdd:PRK06458 144 SALLVGIYRT-RASLEAAWKYIIICSVG---VAFALFgtiLVYANAATVMGDGEMAILwtelLKHASLLDPTLMkLAFVF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 222 LLGGAVGKSAQLPLQTWLADAMA-GPTPVSALIHAATMVTAgVYLIARTHGLFLMTPEIL---HLVGIIGAITLVMAGFA 297
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDfpgRLLLIFGLLSVLVAAFF 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 298 ALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILAcHHEQNIFKMGGLRKSIPL 374
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIAFALGIGgplGIFAALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPL 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 375 VYACFLVGGAALSALPLVtAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIF-IVFHGKEQIHAHAGKGITH 453
Cdd:PRK06458 378 TGWGLMLGALAIAGMPPF-GVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAgMVFGEPPEAVNRGDLGWLT 456
|
490 500
....*....|....*....|..
gi 340763703 454 HLPLIVLMILSTFVGALIVPPL 475
Cdd:PRK06458 457 TSPMFVHLVLVLVLGLYIPQPL 478
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
65-437 |
9.37e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 137.64 E-value: 9.37e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLvlDGLSLTMLSVVTGVGFLIHMFASWYMRGE--EGYSRFFAYTNLFIASMVVLVLSDNLLLMYLG 142
Cdd:PRK06589 67 FELMDFGNYSIGLHL--EPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVC 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 143 WEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFAdgnnmlmwATLML 222
Cdd:PRK06589 145 YELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSI--------ILLLM 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 223 LGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARthgLFLMTPEILHLVGIIGA---------ITLVM 293
Cdd:PRK06589 217 FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYK---ILLYIFGLSYLQRIFAEfnwlifipiVSIFY 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 294 AGFAALVQTDIKRVLAYSTMSQIGYMFLA---LGVQAWDAAIFHLMTHAFFKALLFLASGSvILACHHEQNIFKMGGLRK 370
Cdd:PRK06589 294 SSLKALKTDNIKKILAYSTISQLSLALLSafiLTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSK 372
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 340763703 371 SIPLVYACFLVGGAALSALPlVTAGFFSKDEILAGAMANGHINL----MVAGLVGAFMTSLYTFRMIFIVF 437
Cdd:PRK06589 373 SFPLISFIISISSLSLIGIP-IFSGFISKFLILLAASEQNQPWLsiivMLVVIASSILSALYLLKILSSIY 442
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-475 |
5.46e-34 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 135.33 E-value: 5.46e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLI-----GFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGmdffangkqafsQPLWTWMSVGNFni 75
Cdd:PRK05777 3 ITSLNLILLLPELillgaAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVL------------GAAGGGTAFGGM-- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 76 gfnLVLDGLSLTMLSVVTGVGFLIHMFASWYMRgEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIG 155
Cdd:PRK05777 69 ---LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 156 FYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVElAPAHFADGNNMLMWATLMLLGGAVGKSAQLPL 235
Cdd:PRK05777 145 LRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAK-ALADGSGNSLLLLFGLVFLLVGLAFKLSAVPF 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 236 QTWLADAMAG-PTPVSALIHAATMVtAGVYLIAR--THGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYST 312
Cdd:PRK05777 224 HMWTPDVYEGaPTPVTAFLATAPKI-AAFAVLLRllVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 313 MSQIGYM---FLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSAL 389
Cdd:PRK05777 303 IAHAGYLlvgLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGI 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 390 PLvTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGKGITHHLPLIVLMILSTFVGA 469
Cdd:PRK05777 383 PP-TAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLMYFDEPPRDAPVNWPLSAGGAVLSVSALLVLVLG 461
|
....*.
gi 340763703 470 LIVPPL 475
Cdd:PRK05777 462 IFPQPL 467
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-448 |
5.91e-34 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 135.07 E-value: 5.91e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 4 LALTIILPLIG-FVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSQPLWtwmsVGNFNIGFNLVLD 82
Cdd:TIGR01972 1 LSLLIFLPLIGaLLILLLPSNKDGKARWIALVVALATLLLSLLLLFQFDPTGSGFQFTEDIPW----IPALGISYHLGVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 83 GLSLTMLsVVTGVGFLIHMFASWYmrGEEGYSRFFAYTNLFIASMVVLV-LSDNLLLMYLGWEGVGLCSYLLIGFYySDP 161
Cdd:TIGR01972 77 GISLLLV-LLTALLTLLAILASWE--SIQKRVKEFYALLLLLEAGVIGVfLALDLFLFYVFWEAMLIPMYLLIGVW-GGP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 162 KNGAAAMKAFVVTRVGDVFLAFALFILYNeLGTLNFrEMVELAPAHFADGNNMLMWATLmLLGGAVgKSAQLPLQTWLAD 241
Cdd:TIGR01972 153 NRIYAAMKFFLYTLAGSLLMLLAILGLYF-LGGGTF-DLLELLNLPLPFGVQTWLFLAF-FIAFAV-KVPLFPLHTWLPD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 242 AMA-GPTPVSALIhAATMVTAGVYLIARtHGLFLM---TPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIG 317
Cdd:TIGR01972 229 AHVeAPTAGSVIL-AGVLLKMGTYGFLR-FNLPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMG 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 318 YMFL---ALGVQAWDAAIFHLMTHAFFKALLFLASGsVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLvTA 394
Cdd:TIGR01972 307 FVLLgifSFNELGISGAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG-TS 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 340763703 395 GFFSKDEILAGAMANGHINLMVAGLvGAFMTSLYTFRMIFIVFHGKEQIHAHAG 448
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAAL-GIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-440 |
1.04e-33 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 134.56 E-value: 1.04e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIGFVLLAFSRgRWSENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSQPLWTWmsVGNFNIGFNLV 80
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLLVLLTE-RFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPW--IPRFGISYHLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLsVVTGVGFLIHMFASWYMRGEegYSRFFAYTNLFIASMVVLV-LSDNLLLMYLGWEGVGLCSYLLIGfYYS 159
Cdd:PRK05846 80 VDGISLLLV-VLTALLTPLAVLASWEEIKK--RVKFYMAALLWLEGGVIGVfAALDLLLFYVFFEAMLIPMYFLIG-VWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 160 DPKNGAAAMKAFVVTRVGDVFLAFALFILY----NELGTLNFREMVELAPAHFADGnnMLMWAtlMLLGGAVgKSAQLPL 235
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTFDIADLLNLPLPPGVQY--WLFLA--FFIAFAV-KMPMFPL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 236 QTWLADAMAGPTPVSALIHAATMVTAGVYLIARthglFL--MTPEILH----LVGIIGAITLVMAGFAALVQTDIKRVLA 309
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLR----FSlpLFPDASHefapIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 310 YSTMSQIGYMFLALG---VQAWDAAIFHLMTHAFFKALLFLASGsVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAAL 386
Cdd:PRK05846 307 YSSISHMGFVTLGIFagnQLGIQGAIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 340763703 387 SALPLvTAGFFSKDEILAGAMANGHINLMVAGLvGAFMTSLYTFRMIFIVFHGK 440
Cdd:PRK05846 386 LGLPG-TSGFVGEFLILLGSFQVNPVIAFIATT-GLILAAVYSLWLYQRVMFGP 437
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-439 |
1.12e-33 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 135.89 E-value: 1.12e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 2 NMLALTIILPLIGFVLLAFSRG-RWSenlsatigVGSVGlAALVTAFVgmdFFANGKQAFSQPLWTWMSVGNFNIGFNLV 80
Cdd:PRK08668 1 MELTLLLLTPLIGSVLAYLLKKiNEK--------IGVIG-NALPLLFL---IKLYFTLKVGTGEKLTLFFGGFKLTFTLT 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIHMfASWYMRGEEGYSRFFAytnLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIgfYYSD 160
Cdd:PRK08668 69 HLSWFFAMISLLVIFSVAFFM-VSEKTKNDAYFNMFAL---MSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMV--PMGK 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 161 PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMveLAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLA 240
Cdd:PRK08668 143 KESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADI--SQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAP 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 241 DAMA-GPTPVSALIHAAtMVTAGVYLIA------------RTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRV 307
Cdd:PRK08668 221 DAYSeAPQSFSAVLSGQ-LSKLGAYGFLlvlyvlpgtklfSEFGTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 308 LAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILAChHEQNIFKMGGLRKSIPLVYACFLVGGA 384
Cdd:PRK08668 300 IAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRT-GTTKISEMGGLIEKMPFTFAMYLVAII 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 340763703 385 ALSALPLvTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHG 439
Cdd:PRK08668 379 SLAGIPP-MSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLAGVFLG 432
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
12-399 |
1.62e-32 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 132.93 E-value: 1.62e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 12 LIGFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGmdffangkQAFSQPLWTWMSVGNFNIGFNLVLDGLSLTMLSV 91
Cdd:PRK08667 18 VIPLVFRHKRKRVWQSVLWLVIAIALLLFAGSLQLFTG--------NPLDIPLWGIAPGLDITFHIDRLAAFFIILIGLV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 92 VTGV-----GFLIHMFaswymrGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAA 166
Cdd:PRK08667 90 SLCVaiyslGYNEHMS------SNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 167 AMKAFVVTRVGDVFLAFALFILYNELGTLnfremvELAPAHFADGNNMLMWATLMLLGGAvgKSAQLPLQTWLADAM-AG 245
Cdd:PRK08667 164 GIFYFVMTQLSTVFLMLGIIVLFIQTGSF------ELSPLGASAGILSLVFLLLFLGFGI--KAGIIPFHKWLPYAHpAS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 246 PTPVSALIhAATMVTAGVYLIARthglFLM---TPEILHLVGII--GAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMF 320
Cdd:PRK08667 236 PSNVSALM-SGVMLKVAVYGLVR----FLMdvlSPELWWGVLILlaGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 321 LALGV--------------QAWDAAIFHLMTHAFFKALLFLASGSVILAChHEQNIFKMGGLRKSIPLVYACFLVGGAAL 386
Cdd:PRK08667 311 MGIGLyvifgvygldtlalLALGGALFHSLNHALFKSLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFLVGAVSI 389
|
410
....*....|...
gi 340763703 387 SALPlVTAGFFSK 399
Cdd:PRK08667 390 AALP-PFNGFASE 401
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
5-468 |
5.89e-30 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 123.72 E-value: 5.89e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 5 ALTIILPLIgFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFsqplwtwMSVGNFN--IGFNLVLD 82
Cdd:PRK08377 6 SLLIALPLI-SAFFVPVIKGIGKSAVRYYLILITLLQTGIAGWVFMEVYTTGKPII-------IMAGGWKppVGINLYIG 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 83 GLSLTMLSVVTGVGFLIHMFASWYMRGE--EGYSRFFAytnLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGfYYSD 160
Cdd:PRK08377 78 PFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFL---LLMLGATGMIATGDIFNLFVFMEITAITAYALTA-YNKT 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 161 PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAhfADGNNMLMWATLMLLGGAVgKSAQLPLQTWLA 240
Cdd:PRK08377 154 GEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT--IDPTVAQVGLALLIFGLAV-EAELFPLNAWAP 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 241 DA-MAGPTPVSALIhAATMVTAGVYLIARThgLFLMTP-----EILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMS 314
Cdd:PRK08377 231 DAyQAAPHPITVMF-SAFVVKAGLYAMARI--LYLMQNangwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIG 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 315 QIGY--MFLALGVQAW-DAAIFHLMTHAFFKALLFLASGSVILACHHEQnIFKMGGLRKSIPLVYACFLVGGAALSALPL 391
Cdd:PRK08377 308 QVGMiaLALALGTQAGvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPL 386
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 340763703 392 VtAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGKGIthHLPLIVLMILSTFVG 468
Cdd:PRK08377 387 F-NVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGEGERIRENAAI--GIILLLLAALIVVIG 460
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
4-437 |
8.04e-30 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 122.75 E-value: 8.04e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 4 LALTIILPLIGFVLLAFSRGRWSENLSATIGVgsvgLAALVTAFVGMDFFANgkqafsqplwtwmsvgNFNIGFNLVLDG 83
Cdd:TIGR01770 11 LLGAFILLLYGLFYSRKKRNPLLLKNLSYIVL----LSALVSLFLTLQYAAY----------------LFTGFSFFIVDN 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 84 LSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLF-IASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPK 162
Cdd:TIGR01770 71 FALLIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFaLLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRF 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 163 NGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVgKSAQLPLQTWLADA 242
Cdd:TIGR01770 151 STEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLLGIVLILVGLLF-KLSAVPFHMWVPDV 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 243 MAG-PTPVSALIHAATMVtAGVYLIARTHGLFLMT--PEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYM 319
Cdd:TIGR01770 230 YEGaPTPVTAFFSIVPKI-AIFAVFLRLFLYILFGfsEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 320 ---FLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQN-IFKMGGLRKSIPLVYACFLVGGAALSALPlVTAG 395
Cdd:TIGR01770 309 ligLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDEWIEyISDFAGLFKTNPILAILILIFMFSLAGIP-PLAG 387
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 340763703 396 FFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVF 437
Cdd:TIGR01770 388 FFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVMY 429
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-441 |
3.07e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 121.21 E-value: 3.07e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALT--IILPLIGFVLLAFSRgrWSENLSATIGVGSVGLAALVTAfvgmdffangkqafSQPLWTWMSVGNFniGFN 78
Cdd:PRK07234 1 MTSLTPVwiALPFLLGFAIYLLPK--LDRNLALGMAIVSAVYALGLVA--------------SMVPLELTLLDNF--GVT 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 79 LVLDGLSLTMLsVVTGVGFLIHMFASWymrgEEGYSRFFA-YTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFY 157
Cdd:PRK07234 63 LRADALSGYFI-LTNALVTLAVIFYCW----ESAKTRFFYaQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYP 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 158 YSDpKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFAdgnnmlmwatlMLLGGAVGKSAQLPLQT 237
Cdd:PRK07234 138 RTD-RAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFA-----------LIALGLLVKGGIFVSGL 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 238 WLADAMAGPTPVSALIHAATMVTAGVYLIARthgLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIG 317
Cdd:PRK07234 206 WLPLTHSEAEPPVSALLSGVVVKAGVFPLVR---CALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 318 YMFLALGVqawdAAIFHLmTHAFFKALLFLASGsVILACHHEQNIFKMGGLRKSIPLVYACFlvggaALSALPLVtAGFF 397
Cdd:PRK07234 283 FILAAPLV----GGLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLTMASF-----SIAGFPLL-AGFV 350
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 340763703 398 SKDEIlagaMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKE 441
Cdd:PRK07234 351 SKVLT----LKNLLPWQAIALNLAAVGTAASFWKFIFLPFSADD 390
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
2-485 |
2.47e-27 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 115.82 E-value: 2.47e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 2 NMLALTIILPLIGFVLLAFSRGRwsENLSATIGVGSVGLAALVTAFVGMDFFANGkqafsqPLWtwMSVGN----FNIGF 77
Cdd:PRK12663 4 NLLILPMLLPLLCGLVLVFLRNR--DRLQRYLAIGTLTILTLISLALLIYVQRHG------PIT--LDFGGwlppFGIQF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 78 nlVLDGLSLTMLSVVTGVGFLIHMFAswYMRGEEGYSRFFAYTnlFIASMVVLV----LSDNLLLMYLGWEGVGLCSYLL 153
Cdd:PRK12663 74 --TGDSLSALMVTTASFVATAIMAYG--FGDIEHSGRRYGFPP--FILLLMAGVigsfLTGDLFNLYVWFEVMLIASFVL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 154 IGFYySDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREmVELAPAHFADGNNMLMWATLMLLggAVGKSAQL 233
Cdd:PRK12663 148 ITLG-QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAH-IAMRLNDMGDTATLTTIALLFLL--AFGMKAAL 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 234 PLQTWLADAMAGPTPVSALIHAATMVTAGVY-LIARTHGLFLMTPEILH-LVGIIGAITLVMAGFAALVQTDIKRVLAYS 311
Cdd:PRK12663 224 FPFMWLPAAYHTPNTEVAALFAALLTKVGIYaLIRVFTLLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQ 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 312 TMSQIGYMFLALGV---QAWDAAIFHLMTHAFFKALLFLASGSVILAChHEQNIFKMGGLRKSIPLVYACFLVGGAALSA 388
Cdd:PRK12663 304 VISSIGFILLGLALgtpAGINGAIFYLVHDMVVKTALFLIAGSLVRLT-GYRSLQYLGGLYRKEPLFGALFLILIFAIGG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 389 LPLVTaGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGKGITHH--LPLIVLMILSTF 466
Cdd:PRK12663 383 LPPFS-GFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYrkLPLSILAVVVIA 461
|
490
....*....|....*....
gi 340763703 467 VGaLIVPPLQGVLPQTTEL 485
Cdd:PRK12663 462 MG-IAAEPLLNLTQDAAEG 479
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
122-424 |
4.48e-27 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 115.76 E-value: 4.48e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 122 LFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIgFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMV 201
Cdd:PRK12668 101 LYVGSALGAVFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIA 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 202 ELAPAHfadgnnmlmwATLMLLGGAVgKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARthglflMTPEILH 281
Cdd:PRK12668 180 GLGGTA----------AWLILIGFGV-NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR------AFPGTEL 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 282 LVGIIGAITLVMAGFAaLVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILAChH 358
Cdd:PRK12668 243 LIYIGAAMAVYGVFFA-LLENDLRRLLSYHIVSQVGYMVAGIGIGtalAINGAVAHAFNHILYKGLLFMSAGAVLYRT-G 320
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 340763703 359 EQNIFKMGGLRKSIPLVYACFLVGGAALSALPLvTAGFFSKDEILAGAMANGHIN---LMVAGLVGAFM 424
Cdd:PRK12668 321 TEKLTELGGLYRSMPLTALFCLVGALSISAFPL-FSGFVSKSMIISAAGEDHYVWvwlLLLLASAGTFL 388
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
65-440 |
1.06e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 114.21 E-value: 1.06e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 65 WTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:MTH00063 27 LNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIgFYYSDPKNGAAAMKAFVVTRVGDVflafALFILYnelgtlnfremvelapAHFADGNNMLMWATLMLLG 224
Cdd:MTH00063 107 YLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDV----CLFLLI----------------GLSCWGGSGSFLCCLFFFL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 225 GAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARtHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDI 304
Cdd:MTH00063 166 IVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 305 KRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNI-----FKMGGLRKsipLVYACF 379
Cdd:MTH00063 245 KKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSncvysSILYGSWN---LFYLFL 321
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 340763703 380 LVGGaaLSALPLVTAgFFSKDEILAGAMA-NGHINLMVAGLVGAFMTSLYTFRMIFIVFHGK 440
Cdd:MTH00063 322 LVLG--LSGVPFIGV-FFSKHFLLSSFSSvVFNVSLLLVVILCVFLSYLYSFRLCLILFGVK 380
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-468 |
2.76e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 106.57 E-value: 2.76e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 2 NMLALTIILPLIGFVLLAFSRGRwsENLSATIGVGSVGLAALVTAFVGMDFFANGKQAfsqplwtwMSVGNFN--IGFNL 79
Cdd:PRK07691 4 NLVILPILIPVITAILLIFLGKR--PIIQRYVALIGSLLTLVAAIILVANVYKHGIQT--------LELGNWKapFGIVF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 80 VLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYS 159
Cdd:PRK07691 74 VADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGT 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 160 DPKNgAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREM-VELAPAHFADGNNMLMWATLMLLGGAVgKSAQLPLQTW 238
Cdd:PRK07691 154 KIQL-RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsVKIAELSAGQTGLITVVAILFLFVFAT-KAGLFPLYFW 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 239 LADA-MAGPTPVSALIhAATMVTAGVYLIARTHGLFLM-TPEILH-LVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQ 315
Cdd:PRK07691 232 LPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFShDTSFTHyLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 316 IGYMFLALGVQAWDA---AIFHLMTHAFFKALLFLASGsVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLV 392
Cdd:PRK07691 311 VGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIG-IMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPL 389
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 340763703 393 TaGFFSKDEILAGAMANGHINLMVAGLVGAFMTsLYTFRMIFI-VFHGKEQIHAHAGKGITHHL--PLIVLMILSTFVG 468
Cdd:PRK07691 390 S-GFYGKFFIVEGTFEAGFYVSGIIVLLSSLLV-LYSVIKIFLkGFWGEPKGYDLNNKVPVKKLllPAVVLVAITILYG 466
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
75-447 |
1.60e-23 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 104.34 E-value: 1.60e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 75 IGFN--LVLDGLSLTmLSVVTGVGFLIHMFASWYMrgeEGYSRFFAYTNLFIASMVVLV-LSDNLLLMYLGWEGVGLCSY 151
Cdd:PRK12561 49 IGLEwsLGVDGLSMP-LVLLSGLITTLSIFASWKV---TRKPRLFYFLMLVLYSAQIGVfLAQDLLLFFLMWELELVPVY 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 152 LLIGFYySDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFrEMVELAPAHFADGNNMLMWATLmLLGGAVgKSA 231
Cdd:PRK12561 125 LLISIW-GGQKRLYAATKFILYTALASIFILVAGLALALSGDTFTF-DLAELGAKSYPLALELLLYAGF-LIAFGV-KLP 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 232 QLPLQTWLADAMA-GPTPVSalihaatMVTAGVYLIARTHGLFLMTPEIL---HLV-----GIIGAITLVMAGFAALVQT 302
Cdd:PRK12561 201 IFPLHTWLPDAHGeASAPVS-------MILAGVLLKMGGYALIRFNVQMLpdaHVYfapalAILGVVNIIYGALNAFAQD 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 303 DIKRVLAYSTMSQIGymFLALGVQAWDA-----AIFHLMTHAFFKALLFLASGsVILACHHEQNIFKMGGLRKSIPLVYA 377
Cdd:PRK12561 274 NVKRRLAYSSVSHMG--FVLLGIAAFTDlgisgAMLQMISHGLIAAALFFLTG-VTYERTHTLSIPNMGGLAKVMPKTFA 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 340763703 378 CFLVGGAALSALPLVTaGFFSKDEILAGAMANG-------HINLMVAGlVGAFMTSLYTFRMIFIVFHGK--EQIHAHA 447
Cdd:PRK12561 351 LFTASSMASLALPGMS-GFVSELTVFLGITSSDvysstfrTITILLAA-VGLILTPIYLLSMLRRVFYGPrsELLPALA 427
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
81-353 |
4.95e-23 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 102.81 E-value: 4.95e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSD 160
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 161 PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFRE-MVELAPAHFADGNNMLMwaTLMLLGGAVGKSAQLPLQTWL 239
Cdd:PRK08601 150 KVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSvLSNENLAQLGTWEKTGI--NLLLILAVMIPAAQWPFQRWL 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 240 ADAMAGPTPVSALIHAAtMVTAGVYLIARTHGLFLMTPEILHLVgIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYM 319
Cdd:PRK08601 228 IESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLL-IFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFM 305
|
250 260 270
....*....|....*....|....*....|....
gi 340763703 320 FLALGVQAWDAAIFHLMTHAFFKALLFLASGSVI 353
Cdd:PRK08601 306 LVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-433 |
1.48e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 101.35 E-value: 1.48e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 1 MNMLALTIILPLIGFVLLAFSRGR-WSENLSATIGVGSVGLAALVtafvgmdFFangkQAFSQPLWTWmSVGNFNI--GF 77
Cdd:PRK12662 3 SHLPILQVIIPLLSAVVCALLKNRkLVKIISCIVVAVSFFIALVL-------FV----QVYSGGVIKY-SLGGWGPpyGI 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 78 NLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGE---EGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLI 154
Cdd:PRK12662 71 ELRVDILSATMLVLVNFIAVMSVLYGIYPNRKEisvNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLV 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 155 GFYySDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELApaHFADGNNMLMWATLMLLGGAVGKSAQLP 234
Cdd:PRK12662 151 AMG-RDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLII--QDLPTNRAIQIGVLFIMVGLFIKAALFP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 235 LQTWLADAMAGPTPVSALIHAATMVTAGVYLIART------HGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVL 308
Cdd:PRK12662 228 FHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIF 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 309 AYSTMSQIGYMFLALGVQAWD---AAIFHLMTHAFFKALLFLASGSVILAChHEQNIFKMGGLRKSIPLVYACFLVGGAA 385
Cdd:PRK12662 308 AYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLS 386
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 340763703 386 LSALPLvTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMI 433
Cdd:PRK12662 387 LIGMPP-TSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIV 433
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-429 |
2.11e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 101.20 E-value: 2.11e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 3 MLALTIILPLIGfVLLAFSRGRWSEnLSATIGVGSVGLAALVTAFVGMDFFANGKQAfsqplwtwMSVGNFN--IGFNLV 80
Cdd:PRK12665 4 LAPLPVLLPLLA-AALTLVLGRRPR-AQRAISLLALSAVLVLSAVLLYLVDRDGTQA--------VQLGGWDapIGITLV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 81 LDGLSLTMLSVVTGVGFLIHMFA-SWYMR--GEEGYSRFFAYTNLFIASMVVLV-LSDNLLLMYLGWEGVGLCSYLLIGF 156
Cdd:PRK12665 74 VDRLSALMLVVSSVVLLAVLVYAiGQGIRdgDEEQPVSIFLPTYLILVAGVSNAfLAGDLFNLYVGFEILLVASYVLLTL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 157 YYSDPKNgAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAhFADGNNMLMWATLMLLGGAvgKSAQLPLQ 236
Cdd:PRK12665 154 GATAARV-RAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDE-LPSGTRTALFAVLLVAFGI--KAAVFPLS 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 237 TWLADAM-AGPTPVSAlIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQ 315
Cdd:PRK12665 230 FWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSH 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 316 IGYMFLALG---VQAWDAAIFHLMTHAFFKALLFLASGsVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLV 392
Cdd:PRK12665 309 IGYMVFGIAlstVAGLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPF 387
|
410 420 430
....*....|....*....|....*....|....*..
gi 340763703 393 TaGFFSKDEILAGAMANGHInLMVAGLVGAFMTSLYT 429
Cdd:PRK12665 388 S-GFIGKVALLEAGAEDGTW-LAWALVAGGVVTSLLT 422
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
67-117 |
3.94e-18 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 78.24 E-value: 3.94e-18
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 340763703 67 WMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFF 117
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
3-440 |
6.66e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 87.06 E-value: 6.66e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 3 MLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGMDF-FANGKQAFSQPLwTWMSVGNFNigFNLVL 81
Cdd:PRK06473 1 MLSALIWIPLLGAILIGFWPSGINGKLARSVALVIASVLLLLSLVLAFQFdPGNPNQQFTEFI-PWIDSLGLS--YHLGV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 82 DGLSLTMLsVVTGVGFLIHMFASwymrGEEGYSRFFAYTNLFIASMVVL--VLSDNLLLMYLGWEGVGLCSYLLIGFYyS 159
Cdd:PRK06473 78 DGLSLPLL-VLNSLLTLIAIYSS----DESIQRPRFYYSLLLLLNAGVSgaFLAQDLLLFFLFYELELIPLYLLIAIW-G 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 160 DPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFRemVELAPAHFADGNNMLMWATLMLLGGAVgKSAQLPLQTWL 239
Cdd:PRK06473 152 GQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFD--YEPLRSHTLPLSTQLLLLAPILVGFGI-KIPLVPFHTWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 240 ADA-MAGPTPVSALIhaatmvtAGVYLIARTHGLFL----MTPE----ILHLVGIIGAITLVMAGFAALVQTDIKRVLAY 310
Cdd:PRK06473 229 PDAhVEASTPVSVLL-------AGVLLKLGTYGLLRfgvgLFPEawvyLAPWLATWAVVSVLYGASCAIAQKDMKKMVAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 311 STMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGsVILACHHEQNIFKMGGL---RKSIPLVYACFLVGGA 384
Cdd:PRK06473 302 SSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVM 380
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 340763703 385 ALSALPLVTaGFFSKDEILAGAMANGHINLMVAgLVGAFMTSLYTFRMIFIVFHGK 440
Cdd:PRK06473 381 ASAGIPGMV-GFIAEFLVFRGSFPIFPVQTLLC-MIGTGLTAVYFLLLVNRVFFGR 434
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
116-481 |
3.62e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 84.42 E-value: 3.62e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 116 FFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYySDPKNGAAAMKAFVVTRVGDVFLAFALFILYN----- 190
Cdd:PRK08676 104 FYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFIASTAMIFAFIGLIFLFSltrqa 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 191 -ELGTLNFREMVELAPAHFAdgnNMLMWATLMLLGGAVGKSAQLPLQTWLADAMA-GPTPVSALIhAATMVTAGVYLIAR 268
Cdd:PRK08676 183 lGTGTLNWTELAAHASLLSP---SVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILR 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 269 THGLFLMT---PEILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDA---AIFHLMTHAFFK 342
Cdd:PRK08676 259 LSALLRQSgaaEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVK 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 343 ALLFLASGsvILACHHEQNIF-KMGGLRKSIPLVYACFLVGGAALSALPLVTAgFFSKDEIL-AGAMANGHINLMVAGLV 420
Cdd:PRK08676 339 SGLFFSAG--ILHRQYRSDRFdRIFDVFRLQPVAAWGVILGSAAIIGMPPFPL-FLSKFFILlQLGGISVWLVLAVLLLL 415
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 340763703 421 GAFMTSLYTFRM-IFIVFHGKEQIHAHAGKGITHHLPLIVLMILSTFVGALIVPPLQGVLPQ 481
Cdd:PRK08676 416 LLAASSFAIFLLkAFTRVSEGNADRPVFRTPLSMKLPIVIILALVLALGVYFPPGLADFLDQ 477
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
121-390 |
3.85e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 84.88 E-value: 3.85e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 121 NLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGfyysdpkNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREM 200
Cdd:PRK08042 97 NLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG-------NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLL 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 201 VELAPAhfadgnnmLMWATLMLLGGAVG---KSAQLPLQTWLADAMAG-PTPVSALIHAATMVTA--GVYLIARTHGLFL 274
Cdd:PRK08042 170 DMRMQQ--------LPLGSDIWLLGVIGfglLAGIIPLHGWVPQAHANaSAPAAALFSTVVMKIGllGILTLSLLGGNAP 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 275 MTPEILHLVgiIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALG--------------VQAWDAAIFHLMTHAF 340
Cdd:PRK08042 242 LWWGVALLV--LGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGagvtgialeqpaliALGLVGGLYHLLNHSL 319
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 340763703 341 FKALLFLASGSVILACHHeQNIFKMGGLRKSIPLVYACFLVGGAALSALP 390
Cdd:PRK08042 320 FKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALP 368
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
3-390 |
9.21e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 80.14 E-value: 9.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 3 MLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALVTAFVGMDFFANGKQAFSQPLWTWMSVgnFNIGFNLVLD 82
Cdd:PRK07363 1 MLSVLLWLPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEP--LGLSYSLGVD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 83 GLSLTML---SVVTGVGFlihmfaswYMRGEEGYSR--FFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFY 157
Cdd:PRK07363 79 GLSLPLLvlnSLLTWIAI--------YSIGENTERPrlYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 158 YSDpKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFrEMVELAPAHFADGNNMLMwATLMLLGGAVgKSAQLPLQT 237
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF-DYDAISTQNLSLNTQLIL-LTGLLLGFGI-KIPLVPLHT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 238 WLADAMAGPTPVSALIHAATMVTAGVYLIARtHGLFLMtPEILHLV----GIIGAITLVMAGFAALVQTDIKRVLAYSTM 313
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLR-FGLQLF-PQTWSLVapglAIIGTISVIYGALSAIAQKDIKRMVAYSSI 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 314 SQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGsVILACHHEQNIFKMGGLRKSI---PLVYACFLVGGAALS 387
Cdd:PRK07363 305 GHMGYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNPIrglPLTSALLVLAGMASA 383
|
...
gi 340763703 388 ALP 390
Cdd:PRK07363 384 GIP 386
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
98-468 |
5.15e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 77.76 E-value: 5.15e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 98 LIHMFASWYMRGEEGYSRFFAYTNLF-IASMVVLVLSDNLLLMYLGWEGVGLCSYLLIgFYYSDPKNGAAAMKAFVVTRV 176
Cdd:PRK06277 83 LIASLVLITGLGEKKSSGLYVFLMLMgLASVSAIVLADDIFNLYVFFEIAAIVQVGLV-IASGTEEAYKAALKYMILGNV 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 177 GDVFLAFALFILYNELGTLNFREMVElapAHFAD-GNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTP-VSALIH 254
Cdd:PRK06277 162 AGSILLLGIGFLLASTGTLNITDIHN---ALLVNpTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQ 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 255 A---ATMVTAGVYLIARTHGLFLMTPEILHLVGIiGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMF--LALGVQ-AW 328
Cdd:PRK06277 239 TfskFVLVALMLVIFKLFGGLSYFPSAQGVLIAL-SVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAagLALGTPlGI 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 329 DAAIFHLMTHAFFKALLFLASGSViLACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLVTaGFFSKDEILAGAMA 408
Cdd:PRK06277 318 VAGIFHAINHVIYKSALFLGAGIV-SYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN-GFQSKLMLAQAAMQ 395
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 340763703 409 NGHINL---MVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGKGITHHLPLIVLMILSTFVG 468
Cdd:PRK06277 396 ANMPELaiiMIIVSIGTFVSMMKAFYLIYLKPKPEELEYKNKKVPKYAVFSLAVLTILCIILG 458
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
4-441 |
8.38e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 77.44 E-value: 8.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 4 LALTIILPLIGFVLLAF-------SRGRWSenlsaTIGVGSVGLAALVTAF-VGMDFFANGKQAFSQPLWtwmsVGNFNI 75
Cdd:PRK02546 9 LTTIILFPIVAALLIPFipdkgdgKTVRWY-----ALIVGLIDFLITVYAFyTGYDFSNPGLQLVESYSW----LPQLGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 76 GFNLVLDGLSLTMLsVVTGVGFLIHMFASWYMRGEegySRFFAYTNLFIASMVVLVLS-DNLLLMYLGWEGVGLCSYLLI 154
Cdd:PRK02546 80 TWSVGADGLSMPLI-LLTGFITTLAVLAAWPVTFK---PKLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLLL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 155 GFYySDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFrEMVELAPAHFADGNNMLMWATLMLLGGAvgKSAQLP 234
Cdd:PRK02546 156 AIW-GGKKRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTF-DMTALAAKDFGLGFQLLCYAGLLIAYGV--KLPIVP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 235 LQTWLADAMAGPTpvsALIHaatMVTAGVYLIARTHGLFLMTPEILH--------LVGIIGAITLVMAGFAALVQTDIKR 306
Cdd:PRK02546 232 LHTWLPDAHGEAT---APVH---MLLAGILLKMGGYALLRMNAGMLPdahaqfapLLIVLGVVNIIYAALTSFAQRNLKR 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 307 VLAYSTMSQIGYMFLALG---VQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQnIFKMGGLRKSIPLVYACFLVGG 383
Cdd:PRK02546 306 KIAYSSISHMGFVLIGIGsftDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLM-LDEMGGVGQKMRKMFAMWTACS 384
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 340763703 384 AALSALPLVTaGFFSKDEILAGAMANGHINL----MVAGL--VGAFMTSLYTFRMIFIVFHGKE 441
Cdd:PRK02546 385 LASLALPGMS-GFVAELMVFVGFATSDAYTLpfrvVVVFLaaVGVILTPIYLLSMLREIFFGPE 447
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
135-430 |
4.63e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 68.79 E-value: 4.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 135 NLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFremVELAPAHFADGNNM 214
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDY---LTLASCSHVVSEQT 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 215 LMWATLMLLGGAVGKSAQLPLQTWLADAMAgPTPVsalihAATMVTAGVYLIARTHGLFLMTPEILHL--------VGII 286
Cdd:MTH00226 229 QKWIFLGIFLAMAVKIPIFPFHIWLPKAHV-EAPV-----AGSVLLAGILLKLGGYGLVRLSWPILPLgaqnlapaVIAM 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 287 GAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLAL---GVQAWDAAIFHLMTHAFFKALLFLASgSVILACHHEQNIF 363
Cdd:MTH00226 303 GIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIK 381
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 340763703 364 KMGGLRKSIPLVYACFLVGGAALSALPlvTAGFFSKDEIlaGAMANGHINLMVAGLV--GAFMTSLYTF 430
Cdd:MTH00226 382 YYRGLSITMPIWGTIMIVTSLANVAVP--PSGNFIGEYL--SILSSFNWNPIIGVFVcsGVILSAVYSF 446
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
133-473 |
5.14e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.41 E-value: 5.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 133 SDNLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYN-ELGTLNFREMVElAPAHFADG 211
Cdd:CHL00049 130 ANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYGlSGGEIELQEIVN-GLINTQMY 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 212 NNMLMWATLMLLGGAVG-KSAQLPLQTWLADAMAG-PTPVSALIHAATMVtAGVYLIARTHGL--FLMTPEILHLVGIIG 287
Cdd:CHL00049 209 NSPGISIALIFITVGIGfKLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKV-AASALATRIFDIpfYFSSNEWHLLLEILA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 288 AITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFL-ASGSVILACHH--EQNIFK 364
Cdd:CHL00049 288 ILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLgTFACIVLFGLRtgTDNIRD 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 365 MGGLRKSIPLVYACFLVGGAALSALPLVtAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQ-- 442
Cdd:CHL00049 368 YAGLYTKDPFLALSLALCLLSLGGIPPL-AGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQei 446
|
330 340 350
....*....|....*....|....*....|....*...
gi 340763703 443 ---IHAHAGKGITHHLPLIVLMIL----STFVGALIVP 473
Cdd:CHL00049 447 tpyVRNYRRSPLRSNNSIELSMIVcviaSTIPGISMNP 484
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
2-434 |
1.44e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 63.93 E-value: 1.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 2 NMLALTIILPLIGFVLLAFSrGRWSENLSATIGVGSvGLAALVTAFVGMDFFANGK--QAFSQPLWTWMSVGNFNIG-FN 78
Cdd:MTH00204 1 NGLSLIFLILFMGIINVMGV-PRENSVKLKKRALEW-SLAILFSTLVLWGAFDGEGqfQFINLIEWIISPTLNFQWGpLV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 79 LVLDGLSLTMLsVVTGVGFLIHMFASWymrgeEGYSRFFAYTNLFIASMVVLV----LSDNLLLMYLGWEGVGLCSYLLI 154
Cdd:MTH00204 79 FAVDGVSLFFI-LLTTLLIPICILISW-----KSIKFLFKEFLLCLLFLEVLLigvfSVLDLLLFYILFEGILIPMFLLI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 155 GFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHfadgnNMLMWATLMLLGGAVGKSAQLP 234
Cdd:MTH00204 153 GIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPL-----SIQKWLLVGFFLSLAVKIPQIP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 235 LQTWLADAMAGPTPVSALIHAATMVTAGVY-LIARTHGLFLMTPEILH-LVGIIGAITLVMAGFAALVQTDIKRVLAYST 312
Cdd:MTH00204 228 FHIWLPQAHVEAPVAGSVILAGILLKLGGYgFLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 313 MSQIGYMFLAL---GVQAWDAAIFHLMTHAFFKALLFLASgSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSAL 389
Cdd:MTH00204 308 VAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGF 386
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 340763703 390 PL---VTAGFFSkdeILAGAMAN-GHINLMVAGLVGAFMTSLYTFRMIF 434
Cdd:MTH00204 387 PLscnFVGEFFS---LLAAFEYSlGLGVLVTSGMVWSAAYSLYLYNRIS 432
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
101-352 |
1.04e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 61.34 E-value: 1.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 101 MFASWYMRGEEGYSRFFAYT-NLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPKngaaamKAFVVTRVGDV 179
Cdd:PRK06459 58 ILASLYSIEYDHYGKWLSSLyILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR------PAFVFMAFGEL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 180 --FLAFALFIL-YNELGTLNFREMVELAPahfadgnnmlmwaTLMLLGGAVGKSAQLP--LQTWLADAMAGPTPVSALIH 254
Cdd:PRK06459 132 stVLILAGFAWaFIISGTTNFSYLPSPVP-------------LILASFGFIIKMGMMPflVSEWLPIAHGNAPSNFSAIL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 255 AATMVTAGVYLIARTHGLFLMTPE--ILHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ------ 326
Cdd:PRK06459 199 SATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYmvtkql 278
|
250 260 270
....*....|....*....|....*....|...
gi 340763703 327 -------AWDAAIFHLMTHAFFKALLFLASGSV 352
Cdd:PRK06459 279 itsiehfSLITVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
122-437 |
2.21e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 59.66 E-value: 2.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 122 LFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMV 201
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 202 ELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAG-PTPVSALIhaATMVTAGVYLIARTHGLflmtPEIL 280
Cdd:MTH00196 81 LVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSIGL----NVNI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 281 HLVGiiGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWD---AAIFHLMTHAFFKALLFlasgSVILACH 357
Cdd:MTH00196 155 LLIG--GLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFEsiqASLVYLFIYIIMSICVF----SIILALN 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 358 HEQN-IFKMGGLRKSIPLVYACFLVGGAALSALPLVtAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIV 436
Cdd:MTH00196 229 VYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPPL-VGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKIL 307
|
.
gi 340763703 437 F 437
Cdd:MTH00196 308 F 308
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-410 |
5.79e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 58.71 E-value: 5.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 6 LTIILPLI-GFVLLAFsrGRWSENLSATIGVGSVgLAALVTAFVGMDFFANGKQAFSQPlwtwmsvGNFN--IGFNLVLD 82
Cdd:PRK12666 10 LPILLPLLtAALLLLL--DERRRRLKRAISLAST-LLLLAVAVALLASAAAGGIGVYLL-------GNWPapFGIVLVLD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 83 GLSLTMLSVVTGVGF--LIHMFASWYMRGEEGYSRF----------------FaytNLFIASMVVLVLSDNLLLMYLGWE 144
Cdd:PRK12666 80 RLSALMLLLTALLALaaLLYALAGWDRAGPHFHALFqfqlmglngafltgdlF---NLFVFFEVLLAASYGLLLHGSGRA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLcsylliGFYYsdpkngaaamkaFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPaHFADGNNMLMWATLMLLG 224
Cdd:PRK12666 157 RVRA------GLHY------------VAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIA-QLPAADRALLEAGAALLL 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 225 GAVG-KSAQLPLQTWLADA-MAGPTPVSALIhaATMVTAGVYLIARTHGL-FLMTPEILHLVG-----IIGAITLVMAGF 296
Cdd:PRK12666 218 VVFLiKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLlFGPEAGASAGFGqdwllPGGLATLAFGAI 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 297 AALVQTDIKRVLAYSTMSQIGYMFLALG---VQAWDAAIFHLMTHAFFKALLFL----------------ASGSVILACH 357
Cdd:PRK12666 296 GVLAAQRLRRLAAYLVLVSSGTLLAAIGlgnPAATAAALYYLVHSTLAAAALFLladlverqrgaaadrlAVTPELYDLD 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 340763703 358 HEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLVtAGFFSKDEILAGAMANG 410
Cdd:PRK12666 376 EEEEEEVGVAIPATMALLGLLFFICALALAGLPPL-SGFLGKFALLQALLNPP 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
133-433 |
5.91e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 58.91 E-value: 5.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 133 SDNLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNfrEMVELAPAHFADGN 212
Cdd:PRK02504 129 ATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALITSPS 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 213 NMLMWATLMLLGGAVGKSAQLPLQTWLADAMAG-PTPVSALIHAATMvTAGVYLIAR-THGLFLMTPEILHLVGIIGAI- 289
Cdd:PRK02504 207 LGLALALVFVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRlLVTAFPSFDEQWKLLFTALAIl 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 290 TLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLAL--GVQA-WDAAIFHLMTH------AFFKALLF-LASGSvilachhe 359
Cdd:PRK02504 286 SMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLvaGTEAgYASMVFYLLAYlfmnlgAFACVILFsLRTGT-------- 357
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 340763703 360 QNIFKMGGLRKSIPLVYACFLVGGAALSALPLVtAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMI 433
Cdd:PRK02504 358 DQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPL-AGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVI 430
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
122-470 |
2.60e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 53.58 E-value: 2.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 122 LFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFAlfilynelgtlnfremv 201
Cdd:PRK12664 71 LYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGA----------------- 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 202 elapAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA--MAGPTPVSALIHAATMVTAGVYLiarthgLFLMTPEI 279
Cdd:PRK12664 134 ----SGQAQNGQYTGYCKLLFMLGLLINCACFPASSWVVDAypAASNFGIIVLSLFTTKVAALVLL------LFFSGEEI 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 280 LHLVGIIGAITLVMagFAALVQtDIKRVLAYSTMSQIGYMFLALGV-----QAWDAAIFHLMTHAFFKALLFLASGSVIL 354
Cdd:PRK12664 204 LLFLGIITAIYGII--FASLEQ-NIRRLLCYNVVGQMGLLIIAIGFsgssgVAIGILILQIVLSVVYQTLLFMVADSVIN 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 355 ACHHeQNIFKMGGLRKsIPLVYACFLVGGAALSALPlVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYT---FR 431
Cdd:PRK12664 281 RTRK-FNLNRVGGLFK-MSLEAMCCIIAILNMGAFP-GTAGFVSKSLITHSIDTAGLTLVLYKKLFLICSLLLFAsvgLK 357
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 340763703 432 MIFIVFHGKEQIHAHAGKG-ITHHLPLIVLMILSTFVGAL 470
Cdd:PRK12664 358 FFWYAFISKSKSKPEAEKVyIGSKLSMIILVLICVVLGMF 397
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
130-321 |
7.57e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 51.71 E-value: 7.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 130 LVLSDNLLLMYLGWEGVGLCSYLLIGfYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHfa 209
Cdd:PRK06591 131 MIATNDFFNLYVFIEISALSSYVLIA-SGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQEH-- 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 210 DGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIAR----THGLFLMTPEILHLVGI 285
Cdd:PRK06591 208 TNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKftyiIIGYETIKTAITNFIRP 287
|
170 180 190
....*....|....*....|....*....|....*.
gi 340763703 286 IGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFL 321
Cdd:PRK06591 288 IALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
135-391 |
1.79e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 50.82 E-value: 1.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 135 NLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPahfadGNNM 214
Cdd:MTH00217 130 DLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKI-----EKEL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 215 LMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVY-LIARTHGLFLMTPEILH-LVGIIGAITLV 292
Cdd:MTH00217 205 QYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYgFIRFSWPLLPEASEYFSpLIQTLSLLAII 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 293 MAGFAALVQTDIKRVLAYSTMSQIGYMFLAL---GVQAWDAAIFHLMTHAFFKALLFLASgSVILACHHEQNIFKMGGLR 369
Cdd:MTH00217 285 YGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIfshTIQGLVAAIFLMLAHGLVSSALFIAV-TFLYERHHTRLIKYYRGMV 363
|
250 260
....*....|....*....|..
gi 340763703 370 KSIPLVYACFLVGGAALSALPL 391
Cdd:MTH00217 364 ITMPLFGILMLLLVLANASIPL 385
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
121-437 |
3.20e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 50.02 E-value: 3.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 121 NLFIA-SMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFRE 199
Cdd:MTH00199 103 ILIVAlGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 200 MVELApahFADGNNMLMWATLMLlggavgKSAQLPLQTWLADAMAG-PTPVSALIhaATMVTAGVYLIarthgLFLMTPE 278
Cdd:MTH00199 183 INSIL---TGDVGKILITISLLF------KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVFSI-----LVQIGPV 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 279 IlHLVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDA--------AIFHLMTHAFFKALLFLASG 350
Cdd:MTH00199 247 T-NVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqasliymIIYVIMSICSFSIILSLKLT 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 351 SVIlachheqnIFKMGGLRKSIPLVYACFLVGGAALSALPLVtAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTF 430
Cdd:MTH00199 326 KGL--------IVEVSGLSRKNPVIALTLALTFLSIAGIPPL-AGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYV 396
|
....*..
gi 340763703 431 RMIFIVF 437
Cdd:MTH00199 397 RVVQIIY 403
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
229-337 |
1.29e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 48.32 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 229 KSAQLPLQTWLADAMAG-PTPVSALIHAATMVTAGVYLIArthglFLMTPEILHLVGIIgaiTLVMAGFAALVQTDIKRV 307
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTS-----LVITSKLLLSVAII---SLVVGAFGALNQTRIKRL 383
|
90 100 110
....*....|....*....|....*....|....*..
gi 340763703 308 LAYSTMSQIGYMFLAL------GVQA-WDAAIFHLMT 337
Cdd:MTH00198 384 LAYSGIGHIGFILIGVsagtyeSLQAsWTYAVTYLVS 420
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
130-439 |
1.31e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 48.02 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 130 LVLSDNLLLMYLGWEGVGLCSYLLIGFYySDPKNGAAAMKAFVVTRVGDVFLAFALFI--LYNELG-TLNFREmveLAPA 206
Cdd:CHL00011 128 LFSSRDLLLFFIMWELELIPVYLLLSMW-GGKKRLYSATKFILYTAGGSIFLLIGVLGmgLYGSNEpTLNFET---LANQ 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 207 HFADGNNMLMWATLmLLGGAVgKSAQLPLQTWLADamagpTPVSAliHAAT-MVTAGVYLIARTHGLFLMTPEIL---HL 282
Cdd:CHL00011 204 SYPVALEILFYIGF-LIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLIRINMELLphaHS 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 283 V-----GIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV---QAWDAAIFHLMTHAFFKALLFLASGSvil 354
Cdd:CHL00011 275 IfspwlVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSitdTGLNGAILQIISHGFIGAALFFLAGT--- 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 355 ACHHEQNIF--KMGGLRKSIPLVYACFLVGGAALSALPLVTaGFFSKDEILAGAMANGHINLMVAGLVGAFM------TS 426
Cdd:CHL00011 352 SYDRIRLVYldEMGGIAIPMPKIFTMFSSFSMASLALPGMS-GFVAELIVFFGIITSQKYLLMPKILITFVMaigmilTP 430
|
330
....*....|...
gi 340763703 427 LYTFRMIFIVFHG 439
Cdd:CHL00011 431 IYLLSMLRQMFYG 443
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
68-444 |
1.07e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 44.93 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 68 MSVGNFNIGFNLVldGLSLTMLSVVTgvgFLIHMFASWYMRGEEGYSRFFAYTNLFIASMVVLVL---SDNLLLMYLGWE 144
Cdd:MTH00206 48 WSFSNLYLSYDPL--SSPLVILSCWL---LPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLILffsSSNLLLFYILFE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 145 GVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLnfreMVELAPAHFADGNNMLMWATLMLLG 224
Cdd:MTH00206 123 ASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSL----SLYILYFSKLTTWNNNLWWLACILA 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 225 GAVgksaQLPL---QTWLADAMagptpVSALIhAATMVTAGVYLIARTHGLFLM-------TPEILHLVGIIGAITLVMA 294
Cdd:MTH00206 199 FLV----KLPLygvHLWLPKAH-----VEAPV-AGSMVLAGVLLKLGGYGMMRIililgpsTKLSSYFFIILGLWGSIMT 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 295 GFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFlASGSVILACHHEQNIFKMGGLRKS 371
Cdd:MTH00206 269 SSICLRQTDLKSLIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMI 347
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 340763703 372 IPLVYACFLVGGAALSALPlVTAGFFSKDEILAGAMANGHINLMVAGLvGAFMTSLYTFRMIFIVFHGKEQIH 444
Cdd:MTH00206 348 LPLLSFWWLLFFLANLGLP-PFPNLFGELLIITSLFSWSNFTLPLLGL-GFLFTAIYSLYMFVMTQHGKTPNH 418
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
75-328 |
6.37e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 42.66 E-value: 6.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 75 IGFNLVLDGLSLTMLSVVTGVGFLIHMfASWYMRGEEGYSRFFAYTNLFIASMVVLVLS-DNLLLMYLGWEGVGLCSYLL 153
Cdd:MTH00205 49 ISSSFSFDSLSLPLIMLSFWISLLMVL-ASYKVFKSNKNSKLFTVSVIMLLLILILSFSvDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 154 IGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNfreMVELAPAHFADGNNMLMWATLMLlggavGKSAQL 233
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLS---MFFNFPLNFSDFYLFLYWIFLML-----AFLVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 234 PLQT---WLADAMagptpVSALIhAATMVTAGVYLIARTHGL-------FLMTPEILHLVGIIGAITLVMAGFAALVQTD 303
Cdd:MTH00205 200 PMYFvhlWLPKAH-----VEAPV-SGSMILAGVLLKLGGYGLiritsmlYKLNSNFSELFFSISLWGGVMTGMICLRQVD 273
|
250 260
....*....|....*....|....*
gi 340763703 304 IKRVLAYSTMSQIGYMFLALGVQAW 328
Cdd:MTH00205 274 LKSLIAYSSVGHMGLMVVGVFSNTS 298
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
111-390 |
9.62e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 41.86 E-value: 9.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 111 EGYSRFFAYTNLFIASMVVLVL---SDNLLLMYLGWEGVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFI 187
Cdd:MTH00127 88 EPINRQRMYITLLTSLQIFLILafgATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLL 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 188 LYNELGTLNFREMVELAPAHFADGNNMLMWATLMLlgGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIA 267
Cdd:MTH00127 168 LQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLL--AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMM 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 268 RTHGLFLMTPEILHLVGIIGAI-TLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKA 343
Cdd:MTH00127 246 RMMVMLDPLTKELSYPFIILALwGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQtpwGFTGALILMIAHGLTSS 325
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 340763703 344 LLFLASGSVILACHHEQNIFKMgGLRKSIPLVYACFLVGGAALSALP 390
Cdd:MTH00127 326 ALFCLANTNYERTHSRTMLLAR-GLQMILPLMATWWFIASLANLALP 371
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
122-437 |
1.71e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.02 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 122 LFIASMVVLVLSDNLLLMYLGWEgVGLCSYLLIGFYYSDPKNGAAAMKAFVVTRVGDVFLAFALFILYNelgtlnfremv 201
Cdd:MTH00144 12 LMVMGTLLSLSSSHWLGVWVGLE-INLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYN----------- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 202 elapahfadgNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIArthgLFLMTPEILH 281
Cdd:MTH00144 80 ----------LSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLS----NFLDLYWLAY 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 282 LVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFlalgvqawdAAIFHLMTHAFFKALLFLASGSVILACHHEQN 361
Cdd:MTH00144 146 LLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWML---------VAILHGSWLMWMYFLIYIVSSGFLFFSLWSGD 216
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 340763703 362 IFKMGGLRKSIPLVYACFLVGGAALS--ALPlVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVF 437
Cdd:MTH00144 217 SGSMKDLGSLKPSYKTGLSIISLLLSlgGLP-PFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSF 293
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
214-434 |
2.32e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.53 E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 214 MLMWATLMLLGGAvgksaqlPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIArthglFLMTPEILHLVGIIGAITLVM 293
Cdd:MTH00011 93 MLLVSLMLKLGMA-------PCHFWFPSVMSSISWTLCLILSTWQKIAPLSILF-----FFTSHNILPMMTSMAAMSALA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 340763703 294 AGFAALVQTDIKRVLAYSTMSQIGYMFLALgVQAWDAAIFHLMTHAFFKALLFLASGSV-ILACHHEQNIFKMGglrksi 372
Cdd:MTH00011 161 GGLGGMNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYIIITTPLMLLFAYLnAFSTKFNSKISSMS------ 233
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 340763703 373 PLVYACFLVGGAALSALPLVTaGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIF 434
Cdd:MTH00011 234 QTTSMSLFIMLLSLGGLPPFT-GFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF 294
|
|
| |
