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Conserved domains on  [gi|386272961|gb|AFJ03874|]
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KleE protein (plasmid) [Methylophaga frappieri]

Protein Classification

KleE domain-containing protein( domain architecture ID 13879764)

KleE domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
KleE pfam17394
Uncharacterized KleE stable inheritance protein; This is a family of unknown function found in ...
 3-116 2.64e-54

Uncharacterized KleE stable inheritance protein; This is a family of unknown function found in Proteobacteria. Family Members are predicted to contain two trans-membrane regions.


:

Pssm-ID: 340109  Cd Length: 108  Bit Score: 165.06  E-value: 2.64e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386272961    3 KSNIIKFPKAgptDSGPPDPQPKAQASQqPRKPQSDPtkGGGVLAAILRWVWIAVVLVWPLLKWVISIDVFFQGIRAVYY 82
Cdd:pfam17394   1 MSNIIKFPKS---DSSAHDPAPLKQASL-PARPIDGP--GGGVLANLVKFVWVATVLVWPVLKWVLSIDVFFQFFRMLYH 74

                          90       100       110
                  ....*....|....*....|....*....|....
gi 386272961   83 WNDPAVHAGWTFLAHFAVLTLLTYFVSVYKPKGV 116
Cdd:pfam17394  75 WNTPGVHAGWTFLAHFAALTLLTYFVSLYKPKGL 108
 
Name Accession Description Interval E-value
KleE pfam17394
Uncharacterized KleE stable inheritance protein; This is a family of unknown function found in ...
 3-116 2.64e-54

Uncharacterized KleE stable inheritance protein; This is a family of unknown function found in Proteobacteria. Family Members are predicted to contain two trans-membrane regions.


Pssm-ID: 340109  Cd Length: 108  Bit Score: 165.06  E-value: 2.64e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386272961    3 KSNIIKFPKAgptDSGPPDPQPKAQASQqPRKPQSDPtkGGGVLAAILRWVWIAVVLVWPLLKWVISIDVFFQGIRAVYY 82
Cdd:pfam17394   1 MSNIIKFPKS---DSSAHDPAPLKQASL-PARPIDGP--GGGVLANLVKFVWVATVLVWPVLKWVLSIDVFFQFFRMLYH 74

                          90       100       110
                  ....*....|....*....|....*....|....
gi 386272961   83 WNDPAVHAGWTFLAHFAVLTLLTYFVSVYKPKGV 116
Cdd:pfam17394  75 WNTPGVHAGWTFLAHFAALTLLTYFVSLYKPKGL 108
 
Name Accession Description Interval E-value
KleE pfam17394
Uncharacterized KleE stable inheritance protein; This is a family of unknown function found in ...
 3-116 2.64e-54

Uncharacterized KleE stable inheritance protein; This is a family of unknown function found in Proteobacteria. Family Members are predicted to contain two trans-membrane regions.


Pssm-ID: 340109  Cd Length: 108  Bit Score: 165.06  E-value: 2.64e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386272961    3 KSNIIKFPKAgptDSGPPDPQPKAQASQqPRKPQSDPtkGGGVLAAILRWVWIAVVLVWPLLKWVISIDVFFQGIRAVYY 82
Cdd:pfam17394   1 MSNIIKFPKS---DSSAHDPAPLKQASL-PARPIDGP--GGGVLANLVKFVWVATVLVWPVLKWVLSIDVFFQFFRMLYH 74

                          90       100       110
                  ....*....|....*....|....*....|....
gi 386272961   83 WNDPAVHAGWTFLAHFAVLTLLTYFVSVYKPKGV 116
Cdd:pfam17394  75 WNTPGVHAGWTFLAHFAALTLLTYFVSLYKPKGL 108
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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