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Conserved domains on  [gi|386788586|gb|AFJ34705|]
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hypothetical protein W7S_08650 [Mycobacterium sp. MOTT36Y]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06241 super family cl35452
phosphoenolpyruvate synthase; Validated
 258-551 4.89e-46

phosphoenolpyruvate synthase; Validated


The actual alignment was detected with superfamily member PRK06241:

Pssm-ID: 235751 [Multi-domain]  Cd Length: 871  Bit Score: 173.54  E-value: 4.89e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 258 LQDFLHRHGFHGPREGLVESTVWRENTQPVADLAAAY-RSRRGGEDIDALVLRRRS------EHVAAVRRLEqaLGPIRS 330
Cdd:PRK06241 575 IEAFLEKYGMRCPGEIDITKPRWREDPSTLVPMILNNiKNFEPGASKRKFEQGRQEalekeeELLSRLQQLP--DGEQKA 652

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 331 IPARALIRFAAHAPTWRETGRASMLQAVDVARAASRVVGRDLAEASVLDDPTHVMFLTIDEIVRGDRGNWPD--LVRQRR 408
Cdd:PRK06241 653 KETKRMISRLRNFIGYREYPKYGRIRRYGIYKQALLKEAEQLVQAGVLAEPEDIFYLTFEELREVVRTNKLDyeLIAKRK 732

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 409 SDHATFDRIVLPHVwrgvpeIAAAAAAATGPASEHQ--PDVVEGLGVSAGTAEGIVRVVRDLDDADIDEGSILVCRATDP 486
Cdd:PRK06241 733 EEYELYEKLTPPRV------MTSDGEIITGKYKRENlpAGALIGLPVSSGVVEGRARVILNPEDADLEKGDILVTAFTDP 806

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 386788586 487 SWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTRTGTTTLRDGMRVRVDGTTGRVEILHD 551
Cdd:PRK06241 807 GWTPLFVSIKGLVTEVGGLMTHGAVIAREYGIPAVVGVENATKLIKDGQRIRVDGTEGYVEILEE 871
 
Name Accession Description Interval E-value
PRK06241 PRK06241
phosphoenolpyruvate synthase; Validated
 258-551 4.89e-46

phosphoenolpyruvate synthase; Validated


Pssm-ID: 235751 [Multi-domain]  Cd Length: 871  Bit Score: 173.54  E-value: 4.89e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 258 LQDFLHRHGFHGPREGLVESTVWRENTQPVADLAAAY-RSRRGGEDIDALVLRRRS------EHVAAVRRLEqaLGPIRS 330
Cdd:PRK06241 575 IEAFLEKYGMRCPGEIDITKPRWREDPSTLVPMILNNiKNFEPGASKRKFEQGRQEalekeeELLSRLQQLP--DGEQKA 652

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 331 IPARALIRFAAHAPTWRETGRASMLQAVDVARAASRVVGRDLAEASVLDDPTHVMFLTIDEIVRGDRGNWPD--LVRQRR 408
Cdd:PRK06241 653 KETKRMISRLRNFIGYREYPKYGRIRRYGIYKQALLKEAEQLVQAGVLAEPEDIFYLTFEELREVVRTNKLDyeLIAKRK 732

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 409 SDHATFDRIVLPHVwrgvpeIAAAAAAATGPASEHQ--PDVVEGLGVSAGTAEGIVRVVRDLDDADIDEGSILVCRATDP 486
Cdd:PRK06241 733 EEYELYEKLTPPRV------MTSDGEIITGKYKRENlpAGALIGLPVSSGVVEGRARVILNPEDADLEKGDILVTAFTDP 806

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 386788586 487 SWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTRTGTTTLRDGMRVRVDGTTGRVEILHD 551
Cdd:PRK06241 807 GWTPLFVSIKGLVTEVGGLMTHGAVIAREYGIPAVVGVENATKLIKDGQRIRVDGTEGYVEILEE 871
PpsA COG0574
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and ...
 440-547 1.69e-32

Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism]; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase is part of the Pathway/BioSystem: Gluconeogenesis


Pssm-ID: 440339 [Multi-domain]  Cd Length: 455  Bit Score: 129.95  E-value: 1.69e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 440 ASEHQPDVVEGLGVSAGTAEGIVRVVRDLDDAD-IDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGL 518
Cdd:COG0574  347 AKEEGEVLAKGLPASPGAASGKVVFIADEAELArFQEGVILVRDETDPDDVPGMKAAAGIVTERGGMTSHAAIVARELGI 426

                         90       100
                 ....*....|....*....|....*....
gi 386788586 519 PCVAGTRTGTTTLRDGMRVRVDGTTGRVE 547
Cdd:COG0574  427 PAVVGCGDATRVLKDGDEITVDGTTGEVK 455
PEP-utilizers pfam00391
PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/alpha domain ...
 472-544 1.57e-21

PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/alpha domain which is thought to be mobile in all proteins known to contain it.


Pssm-ID: 459796 [Multi-domain]  Cd Length: 73  Bit Score: 88.24  E-value: 1.57e-21
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 386788586  472 DIDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTRTGTTTLRDGMRVRVDGTTG 544
Cdd:pfam00391   1 KLPEGVILVAPDTTPSDTAGLDKAAGIVTERGGMTSHAAIVARELGIPAVVGVGDATILLKEGDLVTVDGSTG 73
PEP_synth TIGR01418
phosphoenolpyruvate synthase; Also called pyruvate,water dikinase and PEP synthase. The member ...
 447-551 8.21e-21

phosphoenolpyruvate synthase; Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes. [Energy metabolism, Glycolysis/gluconeogenesis]


Pssm-ID: 273612 [Multi-domain]  Cd Length: 786  Bit Score: 96.73  E-value: 8.21e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586  447 VVEGLGVSAGTAEGIVRVVRDLDDAD-IDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTR 525
Cdd:TIGR01418 355 LVTGRAAGPGIASGKVKVIFDLKEMDkFEEGDILVTDMTDPDWEPAMKRASAIVTNEGGMTCHAAIVARELGIPAVVGTG 434

                          90       100
                  ....*....|....*....|....*.
gi 386788586  526 TGTTTLRDGMRVRVDGTTGRVEILHD 551
Cdd:TIGR01418 435 DATKTLKDGMEVTVDCAEGDTGYVYA 460
 
Name Accession Description Interval E-value
PRK06241 PRK06241
phosphoenolpyruvate synthase; Validated
 258-551 4.89e-46

phosphoenolpyruvate synthase; Validated


Pssm-ID: 235751 [Multi-domain]  Cd Length: 871  Bit Score: 173.54  E-value: 4.89e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 258 LQDFLHRHGFHGPREGLVESTVWRENTQPVADLAAAY-RSRRGGEDIDALVLRRRS------EHVAAVRRLEqaLGPIRS 330
Cdd:PRK06241 575 IEAFLEKYGMRCPGEIDITKPRWREDPSTLVPMILNNiKNFEPGASKRKFEQGRQEalekeeELLSRLQQLP--DGEQKA 652

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 331 IPARALIRFAAHAPTWRETGRASMLQAVDVARAASRVVGRDLAEASVLDDPTHVMFLTIDEIVRGDRGNWPD--LVRQRR 408
Cdd:PRK06241 653 KETKRMISRLRNFIGYREYPKYGRIRRYGIYKQALLKEAEQLVQAGVLAEPEDIFYLTFEELREVVRTNKLDyeLIAKRK 732

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 409 SDHATFDRIVLPHVwrgvpeIAAAAAAATGPASEHQ--PDVVEGLGVSAGTAEGIVRVVRDLDDADIDEGSILVCRATDP 486
Cdd:PRK06241 733 EEYELYEKLTPPRV------MTSDGEIITGKYKRENlpAGALIGLPVSSGVVEGRARVILNPEDADLEKGDILVTAFTDP 806

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 386788586 487 SWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTRTGTTTLRDGMRVRVDGTTGRVEILHD 551
Cdd:PRK06241 807 GWTPLFVSIKGLVTEVGGLMTHGAVIAREYGIPAVVGVENATKLIKDGQRIRVDGTEGYVEILEE 871
PpsA COG0574
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and ...
 440-547 1.69e-32

Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism]; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase is part of the Pathway/BioSystem: Gluconeogenesis


Pssm-ID: 440339 [Multi-domain]  Cd Length: 455  Bit Score: 129.95  E-value: 1.69e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 440 ASEHQPDVVEGLGVSAGTAEGIVRVVRDLDDAD-IDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGL 518
Cdd:COG0574  347 AKEEGEVLAKGLPASPGAASGKVVFIADEAELArFQEGVILVRDETDPDDVPGMKAAAGIVTERGGMTSHAAIVARELGI 426

                         90       100
                 ....*....|....*....|....*....
gi 386788586 519 PCVAGTRTGTTTLRDGMRVRVDGTTGRVE 547
Cdd:COG0574  427 PAVVGCGDATRVLKDGDEITVDGTTGEVK 455
PRK08296 PRK08296
hypothetical protein; Provisional
 213-549 2.71e-31

hypothetical protein; Provisional


Pssm-ID: 181362  Cd Length: 603  Bit Score: 128.23  E-value: 2.71e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 213 MGRVEALAVKAGLDGVQHELIKSDEG---TAEFDLVRDLWSlsadTITLQD-FLHrhgfHGPReglvestvWRENTQPVA 288
Cdd:PRK08296 248 LGIADIFASGDSPQEIEAALARSPGGrewLAEWEEAKDPWF----YFSTGTgFYH----HDKS--------WIDDLEIPL 311

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 289 DLAAAY-RSRRGGEDID---ALVLRRRSEHVAAVRRL---------EQALGPIRSI-PA----RALIRFAAHAPTWRetg 350
Cdd:PRK08296 312 GYIKDYiGRLRRGETIErptEALRAERDRIVEEYRDLldgderkafDELLGLARTVyPYvenhNFYVEHWFMSVFWR--- 388

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 351 rasmlqavdvaraASRVVGRDLAEASVLDDPTHVMFLTIDEIVRGDRGN---------------WPDLVRQRRSDHATFD 415
Cdd:PRK08296 389 -------------KVRELGKLLVKHGFLEEVDDIFYLNRTEVLQALFDLvtawavggpprgpayWPEEIARRKAIMEKLR 455

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 416 RIVLPHVWRGVPE------------IAAAAAAATGPASEHQPDVVEGLGVSAGTAEGIVRVVRDLDD-ADIDEGSILVCR 482
Cdd:PRK08296 456 SWSPPPALGVPPEvitepftimlwgITTERVQDWLGLEDGAEGELKGFAASPGVVEGPARVIRSADElSEVQEGEILVCP 535

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 386788586 483 ATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTRTGTTTLRDGMRVRVDGTTGRVEIL 549
Cdd:PRK08296 536 VTSPSWAPIFAKIKATVTDIGGVMSHAAIVCREYGLPAVVGTGNATKRIKTGQRLRVDGTKGVVTIL 602
PRK05865 PRK05865
sugar epimerase family protein;
327-558 2.20e-27

sugar epimerase family protein;


Pssm-ID: 235630 [Multi-domain]  Cd Length: 854  Bit Score: 117.07  E-value: 2.20e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 327 PIRSIP--ARALIRFAAHAPTWRETGRASMLQAVDVARAASRVVGRDLAEASVLDDPTHVMFLTIDEiVRGDRGNWPDLV 404
Cdd:PRK05865 619 PTPVIPlrAKPVALLAARQLRDREVRRDRMVRAIWVLRALLREYGRRLTEAGVFDTPDDVFYLLVDE-IDALPADVSGLV 697

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 405 RQRRSDHATFDRIVLPHVWRGVPEiaaaaAAATGPASEHQPDVVEGLGVSAGTAEGIVRVVRDLDDADIDEGSILVCRAT 484
Cdd:PRK05865 698 ARRRAEQRRLAGIVPPTVFSGSWE-----PSPSSAAALAAGDTLRGVGVCGGRVRGRVRIVRPETIDDLQPGEILVAEVT 772

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 386788586 485 DPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTRTGTTTLRDGMRVRVDGTTGRVEILHDASRVDAA 558
Cdd:PRK05865 773 DVGYTAAFCYAAAVVTELGGPMSHAAVVAREFGFPCVVDAQGATRFLPPGALVEVDGATGEIHVVELASEDGPA 846
PEP-utilizers pfam00391
PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/alpha domain ...
 472-544 1.57e-21

PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/alpha domain which is thought to be mobile in all proteins known to contain it.


Pssm-ID: 459796 [Multi-domain]  Cd Length: 73  Bit Score: 88.24  E-value: 1.57e-21
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 386788586  472 DIDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTRTGTTTLRDGMRVRVDGTTG 544
Cdd:pfam00391   1 KLPEGVILVAPDTTPSDTAGLDKAAGIVTERGGMTSHAAIVARELGIPAVVGVGDATILLKEGDLVTVDGSTG 73
PEP_synth TIGR01418
phosphoenolpyruvate synthase; Also called pyruvate,water dikinase and PEP synthase. The member ...
 447-551 8.21e-21

phosphoenolpyruvate synthase; Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes. [Energy metabolism, Glycolysis/gluconeogenesis]


Pssm-ID: 273612 [Multi-domain]  Cd Length: 786  Bit Score: 96.73  E-value: 8.21e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586  447 VVEGLGVSAGTAEGIVRVVRDLDDAD-IDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTR 525
Cdd:TIGR01418 355 LVTGRAAGPGIASGKVKVIFDLKEMDkFEEGDILVTDMTDPDWEPAMKRASAIVTNEGGMTCHAAIVARELGIPAVVGTG 434

                          90       100
                  ....*....|....*....|....*.
gi 386788586  526 TGTTTLRDGMRVRVDGTTGRVEILHD 551
Cdd:TIGR01418 435 DATKTLKDGMEVTVDCAEGDTGYVYA 460
PRK06464 PRK06464
phosphoenolpyruvate synthase; Validated
 447-546 1.74e-19

phosphoenolpyruvate synthase; Validated


Pssm-ID: 235809 [Multi-domain]  Cd Length: 795  Bit Score: 92.50  E-value: 1.74e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 447 VVEGLGVSAGTAEGIVRVVRDLDDAD-IDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTR 525
Cdd:PRK06464 356 LVEGRAIGPGIGSGKVRVILDISEMDkVQPGDVLVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGTG 435

                         90       100
                 ....*....|....*....|....
gi 386788586 526 TGTTTLRDGMRVRV---DGTTGRV 546
Cdd:PRK06464 436 NATEVLKDGQEVTVscaEGDTGYV 459
PykA2 COG3848
Phosphohistidine swiveling domain of PEP-utilizing enzymes [Signal transduction mechanisms];
447-546 1.51e-16

Phosphohistidine swiveling domain of PEP-utilizing enzymes [Signal transduction mechanisms];


Pssm-ID: 443058  Cd Length: 321  Bit Score: 80.71  E-value: 1.51e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 447 VVEGLGVSAGTAEGIVRVVRDLDDA--DIDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGT 524
Cdd:COG3848  212 LAKGQGIGRGSVTGKAVVARSAEEAleKFEEGDILVVPSTDAEFVPAIEKAAGIITEEGGLTSHAAIVGLELGIPVIVGA 291

                         90       100
                 ....*....|....*....|..
gi 386788586 525 RTGTTTLRDGMRVRVDGTTGRV 546
Cdd:COG3848  292 EGATEILKDGQVVTVDAERGVV 313
PRK05878 PRK05878
pyruvate phosphate dikinase; Provisional
 445-546 5.80e-15

pyruvate phosphate dikinase; Provisional


Pssm-ID: 235635 [Multi-domain]  Cd Length: 530  Bit Score: 77.48  E-value: 5.80e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 445 PDVVEGLGVSAGTAEGivRVVRDLDD----ADIDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPC 520
Cdd:PRK05878 348 PLLAKGLPACPGVVSG--TAYTDVDEaldaADRGEPVILVRDHTRPDDVHGMLAAQGIVTEVGGATSHAAVVSRELGRVA 425

                         90       100
                 ....*....|....*....|....*.
gi 386788586 521 VAGTRTGTTTLRDGMRVRVDGTTGRV 546
Cdd:PRK05878 426 VVGCGAGVAAALAGKEITVDGYEGEV 451
PtsA COG1080
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate ...
 463-548 3.58e-10

Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism];


Pssm-ID: 440698 [Multi-domain]  Cd Length: 571  Bit Score: 62.40  E-value: 3.58e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 463 RVVRDL------DDADIDEGSILVCRATDPSWASLFALAE--AVVTDVGSAMSHAAIVCRELGLPCVAGTRTGTTTLRDG 534
Cdd:COG1080  135 RVLRNLlgveapDLSDLPEPVILVAHDLTPSDTAQLDPSRvaGFVTDLGGRTSHTAILARSLGIPAVVGLGDALLLVKDG 214

                         90
                 ....*....|....
gi 386788586 535 MRVRVDGTTGRVEI 548
Cdd:COG1080  215 DLVIVDGDAGVVIV 228
PRK06354 PRK06354
pyruvate kinase; Provisional
 447-546 3.26e-08

pyruvate kinase; Provisional


Pssm-ID: 235784 [Multi-domain]  Cd Length: 590  Bit Score: 56.47  E-value: 3.26e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 447 VVEGLGVSAGTAEGIVRVVRD-LDDADIDEGSILVCRATDPSWASLFALAEAVVTDVGSAMSHAAIVCRELGLPCVAGTR 525
Cdd:PRK06354 482 VAKGQGIGRKSVSGKARVAKTaAEVAKVNEGDILVTPSTDADMIPAIEKAAAIITEEGGLTSHAAVVGLRLGIPVIVGVK 561

                         90       100
                 ....*....|....*....|.
gi 386788586 526 TGTTTLRDGMRVRVDGTTGRV 546
Cdd:PRK06354 562 NATSLIKDGQIITVDAARGVV 582
PRK05849 PRK05849
hypothetical protein; Provisional
 453-521 1.44e-04

hypothetical protein; Provisional


Pssm-ID: 235623 [Multi-domain]  Cd Length: 783  Bit Score: 44.59  E-value: 1.44e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386788586 453 VSAGTAEGIVRVVRDLDDADIdEGSILVCRATDPSWASLFALAEA-VVTDVGSAMSHAAIVCRELGLPCV 521
Cdd:PRK05849 686 ITQKRVEATVADLDNDNDDDL-EGKIVCIENADPGYDWLFTKGIAgLITCYGGANSHMAIRAAELGLPAV 754
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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