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Conserved domains on  [gi|451783276|gb|AGF54244|]
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hypothetical protein Cspa_c04260 [Clostridium saccharoperbutylacetonicum N1-4(HMT)]

Protein Classification

DUF3969 domain-containing protein( domain architecture ID 10586861)

DUF3969 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3969 pfam13108
Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. ...
 16-117 1.26e-36

Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 110 amino acids in length.


:

Pssm-ID: 404088  Cd Length: 102  Bit Score: 120.24  E-value: 1.26e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 451783276   16 NKIEIERFILISIIGLMDSLSVDAISIEECEMYLFSPYSVEKLNTLNLDEQIVELVENGYELEDVESLIPEELYKSIDKI 95
Cdd:pfam13108   1 NQPDLERLILIAILGLCESLKLGTVSIEEAEQYLFGPYLLERLEKLNADDQLVELIHKGTELEDVASLIPEELEKSIEEI 80

                          90       100
                  ....*....|....*....|..
gi 451783276   96 RLKAIELLKNLPREGVDIKKWL 117
Cdd:pfam13108  81 KTKCLQVLAELPPGEMSGEKWL 102
 
Name Accession Description Interval E-value
DUF3969 pfam13108
Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. ...
 16-117 1.26e-36

Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 110 amino acids in length.


Pssm-ID: 404088  Cd Length: 102  Bit Score: 120.24  E-value: 1.26e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 451783276   16 NKIEIERFILISIIGLMDSLSVDAISIEECEMYLFSPYSVEKLNTLNLDEQIVELVENGYELEDVESLIPEELYKSIDKI 95
Cdd:pfam13108   1 NQPDLERLILIAILGLCESLKLGTVSIEEAEQYLFGPYLLERLEKLNADDQLVELIHKGTELEDVASLIPEELEKSIEEI 80

                          90       100
                  ....*....|....*....|..
gi 451783276   96 RLKAIELLKNLPREGVDIKKWL 117
Cdd:pfam13108  81 KTKCLQVLAELPPGEMSGEKWL 102
 
Name Accession Description Interval E-value
DUF3969 pfam13108
Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. ...
 16-117 1.26e-36

Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 110 amino acids in length.


Pssm-ID: 404088  Cd Length: 102  Bit Score: 120.24  E-value: 1.26e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 451783276   16 NKIEIERFILISIIGLMDSLSVDAISIEECEMYLFSPYSVEKLNTLNLDEQIVELVENGYELEDVESLIPEELYKSIDKI 95
Cdd:pfam13108   1 NQPDLERLILIAILGLCESLKLGTVSIEEAEQYLFGPYLLERLEKLNADDQLVELIHKGTELEDVASLIPEELEKSIEEI 80

                          90       100
                  ....*....|....*....|..
gi 451783276   96 RLKAIELLKNLPREGVDIKKWL 117
Cdd:pfam13108  81 KTKCLQVLAELPPGEMSGEKWL 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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