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Conserved domains on  [gi|472257841|gb|AGI32371|]
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cell division protein ZapB [Mannheimia haemolytica USDA-ARS-USMARC-183]

Protein Classification

cell division protein ZapB( domain architecture ID 10006899)

cell division protein ZapB is non-essential, abundant cell division factor that is required for proper Z-ring formation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ZapB COG3074
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 1-72 1.30e-12

Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 442308 [Multi-domain]  Cd Length: 79  Bit Score: 56.52  E-value: 1.30e-12
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 472257841  1 MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQE-------NDTLRSEYEQLKVEQQNFQDRLRSLLGQIDNV 72
Cdd:COG3074   1 MSLELLEELEAKVQQAVDTIELLQMEVEELKEKNEELEQEneelqseNEELQSENEQLKTENAEWQERIRSLLGKIDEV 79
 
Name Accession Description Interval E-value
ZapB COG3074
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 1-72 1.30e-12

Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442308 [Multi-domain]  Cd Length: 79  Bit Score: 56.52  E-value: 1.30e-12
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 472257841  1 MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQE-------NDTLRSEYEQLKVEQQNFQDRLRSLLGQIDNV 72
Cdd:COG3074   1 MSLELLEELEAKVQQAVDTIELLQMEVEELKEKNEELEQEneelqseNEELQSENEQLKTENAEWQERIRSLLGKIDEV 79
ZapB pfam06005
Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is ...
 1-71 1.23e-10

Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation.


Pssm-ID: 428718 [Multi-domain]  Cd Length: 71  Bit Score: 51.50  E-value: 1.23e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 472257841   1 MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTLRSEYEQLKVEQQNFQDRLRSLLGQIDN 71
Cdd:pfam06005  1 MSLELLEQLETKIQAAVDTIALLQMENEELKEENEELKEEANELEEENQQLKQERNQWQERIRGLLGKLDE 71
PRK15422 PRK15422
septal ring assembly protein ZapB; Provisional
 1-72 3.41e-08

septal ring assembly protein ZapB; Provisional


Pssm-ID: 185320 [Multi-domain]  Cd Length: 79  Bit Score: 45.46  E-value: 3.41e-08
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 472257841  1 MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQE-------NDTLRSEYEQLKVEQQNFQDRLRSLLGQIDNV 72
Cdd:PRK15422  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEvqnaqhqREELERENNHLKEQQNGWQERLQALLGRMEEV 79
 
Name Accession Description Interval E-value
ZapB COG3074
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 1-72 1.30e-12

Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442308 [Multi-domain]  Cd Length: 79  Bit Score: 56.52  E-value: 1.30e-12
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 472257841  1 MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQE-------NDTLRSEYEQLKVEQQNFQDRLRSLLGQIDNV 72
Cdd:COG3074   1 MSLELLEELEAKVQQAVDTIELLQMEVEELKEKNEELEQEneelqseNEELQSENEQLKTENAEWQERIRSLLGKIDEV 79
ZapB pfam06005
Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is ...
 1-71 1.23e-10

Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation.


Pssm-ID: 428718 [Multi-domain]  Cd Length: 71  Bit Score: 51.50  E-value: 1.23e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 472257841   1 MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTLRSEYEQLKVEQQNFQDRLRSLLGQIDN 71
Cdd:pfam06005  1 MSLELLEQLETKIQAAVDTIALLQMENEELKEENEELKEEANELEEENQQLKQERNQWQERIRGLLGKLDE 71
PRK15422 PRK15422
septal ring assembly protein ZapB; Provisional
 1-72 3.41e-08

septal ring assembly protein ZapB; Provisional


Pssm-ID: 185320 [Multi-domain]  Cd Length: 79  Bit Score: 45.46  E-value: 3.41e-08
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 472257841  1 MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQE-------NDTLRSEYEQLKVEQQNFQDRLRSLLGQIDNV 72
Cdd:PRK15422  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEvqnaqhqREELERENNHLKEQQNGWQERLQALLGRMEEV 79
COG4026 COG4026
Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General ...
 3-68 7.29e-04

Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General function prediction only];


Pssm-ID: 443204 [Multi-domain]  Cd Length: 287  Bit Score: 35.86  E-value: 7.29e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 472257841   3 LSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTLRSEYEQLKVEQQNFQDRLRSLLGQ 68
Cdd:COG4026  127 IPEYNELREELLELKEKIDEIAKEKEKLTKENEELESELEELREEYKKLREENSILEEEFDNIKSE 192
COG2433 COG2433
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
6-55 1.37e-03

Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];


Pssm-ID: 441980 [Multi-domain]  Cd Length: 644  Bit Score: 34.83  E-value: 1.37e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 472257841   6 LDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTLRSEYEQLKVEQ 55
Cdd:COG2433  408 LTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEE 457
PRK03992 PRK03992
proteasome-activating nucleotidase; Provisional
 6-52 1.88e-03

proteasome-activating nucleotidase; Provisional


Pssm-ID: 179699 [Multi-domain]  Cd Length: 389  Bit Score: 34.42  E-value: 1.88e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 472257841   6 LDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTLRSEYEQLK 52
Cdd:PRK03992   3 LEALEERNSELEEQIRQLELKLRDLEAENEKLERELERLKSELEKLK 49
PRK03992 PRK03992
proteasome-activating nucleotidase; Provisional
 11-64 7.39e-03

proteasome-activating nucleotidase; Provisional


Pssm-ID: 179699 [Multi-domain]  Cd Length: 389  Bit Score: 32.88  E-value: 7.39e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 472257841  11 EKIKQAVETIQLLQLEVEELKGKNDAAKQENDTLRSEYEQLKVEqqnfQDRLRS 64
Cdd:PRK03992   1 ERLEALEERNSELEEQIRQLELKLRDLEAENEKLERELERLKSE----LEKLKS 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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