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Conserved domains on  [gi|567358303|gb|AHC88291|]
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hypothetical protein X970_13170 [Pseudomonas monteilii SB3101]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tsi6 pfam18660
Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas ...
 5-87 5.55e-40

Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas aeruginosa. The Tsi6 immunity protein adopts an all-alpha-helical fold that binds to a surface of Tse6.


:

Pssm-ID: 408442  Cd Length: 83  Bit Score: 127.02  E-value: 5.55e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567358303   5 TPLGYVQKAIDITAQRNKACPAYPIYGMLLNQLDYVKAVFEGREQDKSKLHQLSIGAIASKEFEENDPELARALKDAYYV 84
Cdd:pfam18660  1 TALDYVDRALALVQKRLKALPGFPIYQSIEQQLQYLRDVLEGEEKDKSKLHTLTFGAYAVKEFEETDPELARALSDANYI 80


                 ...
gi 567358303  85 AIQ 87
Cdd:pfam18660 81 ASQ 83
 
Name Accession Description Interval E-value
Tsi6 pfam18660
Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas ...
 5-87 5.55e-40

Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas aeruginosa. The Tsi6 immunity protein adopts an all-alpha-helical fold that binds to a surface of Tse6.


Pssm-ID: 408442  Cd Length: 83  Bit Score: 127.02  E-value: 5.55e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567358303   5 TPLGYVQKAIDITAQRNKACPAYPIYGMLLNQLDYVKAVFEGREQDKSKLHQLSIGAIASKEFEENDPELARALKDAYYV 84
Cdd:pfam18660  1 TALDYVDRALALVQKRLKALPGFPIYQSIEQQLQYLRDVLEGEEKDKSKLHTLTFGAYAVKEFEETDPELARALSDANYI 80


                 ...
gi 567358303  85 AIQ 87
Cdd:pfam18660 81 ASQ 83
 
Name Accession Description Interval E-value
Tsi6 pfam18660
Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas ...
 5-87 5.55e-40

Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas aeruginosa. The Tsi6 immunity protein adopts an all-alpha-helical fold that binds to a surface of Tse6.


Pssm-ID: 408442  Cd Length: 83  Bit Score: 127.02  E-value: 5.55e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567358303   5 TPLGYVQKAIDITAQRNKACPAYPIYGMLLNQLDYVKAVFEGREQDKSKLHQLSIGAIASKEFEENDPELARALKDAYYV 84
Cdd:pfam18660  1 TALDYVDRALALVQKRLKALPGFPIYQSIEQQLQYLRDVLEGEEKDKSKLHTLTFGAYAVKEFEETDPELARALSDANYI 80


                 ...
gi 567358303  85 AIQ 87
Cdd:pfam18660 81 ASQ 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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