|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-343 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 688.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00119 38 LGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTG 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00119 118 VILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIH 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00119 198 LLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00119 278 AYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASI 357
|
330 340
....*....|....*....|...
gi 649912605 321 SYFTILLILFPIVGALENKMLNL 343
Cdd:MTH00119 358 LYFTILLILFPLLGALENKMLNY 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-337 |
1.14e-122 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 357.95 E-value: 1.14e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYlyKE----T 76
Cdd:COG1290 46 ALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKprelN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 77 WNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FILPFAIAG 155
Cdd:COG1290 124 WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLA 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 156 LTFIHLTFLHETGSNNPLGI----SSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNllGDPENFTPANPLVTPPH 231
Cdd:COG1290 204 LVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAH 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 232 IKPEWYFLFAYAILRSIP--NKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVeh 309
Cdd:COG1290 282 IQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP-- 359
|
330 340
....*....|....*....|....*...
gi 649912605 310 PFIIIGQLASLSYFTILLILFPIVGALE 337
Cdd:COG1290 360 IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-170 |
5.81e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 247.67 E-value: 5.81e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSY--LYKETWN 78
Cdd:cd00284 29 LGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkPRELTWV 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 79 TGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTF 158
Cdd:cd00284 109 IGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVI 188
|
170
....*....|..
gi 649912605 159 IHLTFLHETGSN 170
Cdd:cd00284 189 LHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-168 |
2.50e-70 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 217.25 E-value: 2.50e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYG--SYLYKETWN 78
Cdd:pfam00033 20 LGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTWV 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 79 TGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTF 158
Cdd:pfam00033 100 IGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILML 179
|
170
....*....|
gi 649912605 159 IHLTFLHETG 168
Cdd:pfam00033 180 LHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
222-294 |
4.79e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.50 E-value: 4.79e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 649912605 222 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTF-RPISQ--FLFWALVT 294
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATtvFLFGTVVA 140
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-343 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 688.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00119 38 LGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTG 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00119 118 VILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIH 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00119 198 LLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00119 278 AYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASI 357
|
330 340
....*....|....*....|...
gi 649912605 321 SYFTILLILFPIVGALENKMLNL 343
Cdd:MTH00119 358 LYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-342 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 627.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00131 37 LGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00131 117 VVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILH 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00131 197 LLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLF 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00131 277 AYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASV 356
|
330 340
....*....|....*....|..
gi 649912605 321 SYFTILLILFPIVGALENKMLN 342
Cdd:MTH00131 357 LYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-341 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 620.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00100 37 LGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00100 117 IILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVH 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00100 197 LLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLF 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00100 277 AYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASI 356
|
330 340
....*....|....*....|.
gi 649912605 321 SYFTILLILFPIVGALENKML 341
Cdd:MTH00100 357 LYFLIILILMPIASLIENNLL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-343 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 609.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00074 38 LGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIG 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00074 118 VILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIH 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00074 198 LLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLF 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00074 278 AYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASI 357
|
330 340
....*....|....*....|...
gi 649912605 321 SYFTILLILFPIVGALENKMLNL 343
Cdd:MTH00074 358 LYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-332 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 575.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00191 34 LGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNVG 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00191 114 VILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIH 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00191 194 LLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLF 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00191 274 AYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFILLGQISSF 353
|
330
....*....|..
gi 649912605 321 SYFTILLILFPI 332
Cdd:MTH00191 354 LYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-330 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 568.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00156 27 LGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00156 107 VIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIH 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00156 187 LLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLF 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00156 267 AYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILTGQILTI 346
|
330
....*....|
gi 649912605 321 SYFTILLILF 330
Cdd:MTH00156 347 LYFLYFIINP 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-341 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 553.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00145 38 LGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIG 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00145 118 VTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLH 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00145 198 LLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLF 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00145 278 AYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTV 357
|
330 340
....*....|....*....|.
gi 649912605 321 SYFTILLILfPIVGALENKML 341
Cdd:MTH00145 358 LYFLFFLIL-PLVQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-342 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 545.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00034 37 LGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00034 117 VILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIH 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00034 197 LLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLF 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00034 277 AYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASV 356
|
330 340
....*....|....*....|..
gi 649912605 321 SYFTILLILFPIVGALENKMLN 342
Cdd:MTH00034 357 LYFSLFLFFFPLISYLENKLIF 378
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-341 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 520.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00016 38 LGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIG 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00016 118 VILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIH 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00016 198 LLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLW 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00016 278 AYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTV 357
|
330 340
....*....|....*....|.
gi 649912605 321 SYFTILLIlFPIVGALENKML 341
Cdd:MTH00016 358 FYFFYFMI-NPLLMKLWDKLL 377
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-343 |
1.38e-169 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 476.89 E-value: 1.38e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00053 38 LGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVG 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00053 118 VLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVH 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00053 198 LIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLF 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00053 278 AYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASI 357
|
330 340
....*....|....*....|...
gi 649912605 321 SYFTILLILFPIVGALENKMLNL 343
Cdd:MTH00053 358 FYFAYFLILMPLAGYLENKLLKL 380
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-342 |
1.09e-167 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 471.88 E-value: 1.09e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00022 36 LGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVG 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00022 116 VVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVH 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00022 196 LIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLF 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00022 276 AYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSF 355
|
330 340
....*....|....*....|..
gi 649912605 321 SYFTILLILFPIVGALENKMLN 342
Cdd:MTH00022 356 FYFFYFLVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-342 |
1.69e-158 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 448.60 E-value: 1.69e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00224 38 LGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIG 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00224 118 VILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILH 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00224 198 IMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLW 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00224 278 MYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTI 357
|
330 340
....*....|....*....|..
gi 649912605 321 SYFTiLLILFPIVGALENKMLN 342
Cdd:MTH00224 358 LYFS-YFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-338 |
1.66e-127 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 370.04 E-value: 1.66e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00033 34 LCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVG 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00033 114 VLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAH 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFS--PNLLGDPENFTPANPLVTPPHIKPEWYF 238
Cdd:MTH00033 194 LLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPENFIQANPLVTPVHIQPEWYF 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 239 LFAYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPV-EHPFIIIGQL 317
Cdd:MTH00033 274 LFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRI 353
|
330 340
....*....|....*....|.
gi 649912605 318 ASLSYFTILLILFPIVGALEN 338
Cdd:MTH00033 354 ATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-337 |
1.14e-122 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 357.95 E-value: 1.14e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYlyKE----T 76
Cdd:COG1290 46 ALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKprelN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 77 WNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FILPFAIAG 155
Cdd:COG1290 124 WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLA 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 156 LTFIHLTFLHETGSNNPLGI----SSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNllGDPENFTPANPLVTPPH 231
Cdd:COG1290 204 LVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAH 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 232 IKPEWYFLFAYAILRSIP--NKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTWIGSQPVeh 309
Cdd:COG1290 282 IQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP-- 359
|
330 340
....*....|....*....|....*...
gi 649912605 310 PFIIIGQLASLSYFTILLILFPIVGALE 337
Cdd:COG1290 360 IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-330 |
1.47e-109 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 323.43 E-value: 1.47e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00086 26 LGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWISG 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00086 106 LTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFH 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMlLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLF 240
Cdd:MTH00086 186 LIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLF 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 241 AYAILRSIPNKLGGVLALAASVLILFLAPLLHKSkqrTMTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLASL 320
Cdd:MTH00086 265 AYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFLSQIFSF 341
|
330
....*....|
gi 649912605 321 SYFTILLILF 330
Cdd:MTH00086 342 IYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-328 |
3.03e-87 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 266.46 E-value: 3.03e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKETWNTG 80
Cdd:MTH00046 28 LSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNVG 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTFIH 160
Cdd:MTH00046 108 FILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVH 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 161 LTFLHETGSNNPLGISSD-CDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFL 239
Cdd:MTH00046 188 LFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYFL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 240 FAYAILRSIPNKLGGvLALAASVLILFLAPLLHKSKqrtmTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLAS 319
Cdd:MTH00046 268 AFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFNGSS----VYSVWRQVNFWLIVSLFFSLSYLGGCHPEYPYLLISQLFS 342
|
....*....
gi 649912605 320 LSYFTILLI 328
Cdd:MTH00046 343 VLMVLLLFI 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-170 |
5.81e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 247.67 E-value: 5.81e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSY--LYKETWN 78
Cdd:cd00284 29 LGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkPRELTWV 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 79 TGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTF 158
Cdd:cd00284 109 IGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVI 188
|
170
....*....|..
gi 649912605 159 IHLTFLHETGSN 170
Cdd:cd00284 189 LHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-168 |
2.50e-70 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 217.25 E-value: 2.50e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 1 LGICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYG--SYLYKETWN 78
Cdd:pfam00033 20 LGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTWV 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 79 TGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFILPFAIAGLTF 158
Cdd:pfam00033 100 IGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILML 179
|
170
....*....|
gi 649912605 159 IHLTFLHETG 168
Cdd:pfam00033 180 LHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
171-318 |
3.95e-55 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 177.07 E-value: 3.95e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 171 NPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLATFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 250
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 649912605 251 KLGGVLALAASVLILFLAPLLHKSKQRTmTFRPISQFLFWALVTNLLILTWIGSQPVEHPFIIIGQLA 318
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
222-322 |
1.82e-48 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 158.03 E-value: 1.82e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 222 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFRPISQFLFWALVTNLLILTW 301
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 649912605 302 IGSQPVEHPFIIIGQLASLSY 322
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
52-217 |
5.06e-43 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 146.62 E-value: 5.06e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 52 SFFFICIYLHIGRGFYYGSYLYKE--TWNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAW 129
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 130 GGFSVDNPTLTRFFALHF-ILPFAIAGLTFIHLTFLHETGSNNPLGISSDCDKIPFHPYFSMKDILGFMLLLLPLTTLAT 208
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 649912605 209 FSPNLLGDP 217
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
3-173 |
3.68e-35 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 127.91 E-value: 3.68e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 3 ICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKE--TWNTG 80
Cdd:PRK03735 50 FCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVG 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FILPFAIAGLTFI 159
Cdd:PRK03735 130 VLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLA 209
|
170
....*....|....
gi 649912605 160 HLTFLHETGSNNPL 173
Cdd:PRK03735 210 HFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
3-173 |
1.87e-31 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 117.90 E-value: 1.87e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 3 ICLTTQIITGLLLAMHYTADTTLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKE--TWNTG 80
Cdd:CHL00070 42 TCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRelTWVTG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912605 81 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FILPFAIAGLTFI 159
Cdd:CHL00070 122 VVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLM 201
|
170
....*....|....
gi 649912605 160 HLTFLHETGSNNPL 173
Cdd:CHL00070 202 HFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
222-294 |
3.37e-11 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 60.96 E-value: 3.37e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 649912605 222 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTFR---PISQFLFWALVT 294
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFRrpvATAVFLFGTLVT 141
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
222-294 |
6.83e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 60.02 E-value: 6.83e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 649912605 222 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLAPLLHK-SKQRTMTFRPISQ--FLFWALVT 294
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENvNKFQNPFRRPVATtvFLIGTAVA 140
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
222-294 |
4.79e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.50 E-value: 4.79e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 649912605 222 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLAPLLHKSKQRTMTF-RPISQ--FLFWALVT 294
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATtvFLFGTVVA 140
|
|
| |
