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Conserved domains on  [gi|732686671|gb|AIZ93476|]
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porin [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

carbohydrate porin( domain architecture ID 10568708)

carbohydrate porin belonging to the LamB family whose members are thought to bind various sugars; similar to maltoporin which is involved in the transport of maltose and maltodextrins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Maltoporin-like cd01346
The Maltoporin-like channels (LamB porin) form a trimeric structure which facilitate the ...
125-538 2.21e-137

The Maltoporin-like channels (LamB porin) form a trimeric structure which facilitate the diffusion of maltodextrins and other sugars across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an 18-strand antiparallel beta-barrel (18,22). Loop 3 folds into the core to constrict pore size. Long irregular loops are found on the extracelllular side, while short turns are in the periplasm.Tightly-bound water molecules are found in the eyelet of the passage, and only substrates that can displace and replace the broken hydrogen bonds are likely to enter the pore. In the MPR structure, loops 4,6, and 9 have the greatest mobility and are highly variable; these are postulated to attract maltodextrins.


:

Pssm-ID: 238656  Cd Length: 392  Bit Score: 403.30  E-value: 2.21e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 125 FSYNGYYRSGWGTASHGSPKS----WAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDAVVMMDGNVGQQYSTGWfgdn 200
Cdd:cd01346    1 FEFHGYARSGVGYSDGGGAQTcfagGGGGSVGRLGNECDTYFELGLKKEVYNDNGVTADFVVMVAQGNGQSNDWTF---- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 201 AGGENYMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAAaGVGLENWKVGPGKIDIALVREDVDDY 280
Cdd:cd01346   77 AADDGDLNVRQAYVELKGLLPFLPGATFWAGKRFYRRHDIHILDFYYWNTSGT-GAGIENVQLGDGKLSFALVRSDNQDD 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 281 DRslQNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESASekdnqdnnGYYDWKDTWMFGTSLTQKFDKGGFNEFS 360
Cdd:cd01346  156 DT--TYDSDTNLNAIDLRYAGIPLNPGGSLQLGGKYGFANDSDS--------GYYDAKDGWMLTALHHQKDFLGGFNKTA 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 361 FLVANNSIASNFGRYAGaspfttfngrYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNDIYSYetgaHSDFESI 440
Cdd:cd01346  226 LQYGTGAGSGQGGSGGD----------YGGLDDGASSWRLAEYGEWQLGDRFGGGVALVYQRGNDPYGY----GDDYQWA 291
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 441 RAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTSMLtSRPEIRFYATYIKALENELDGFT- 519
Cdd:cd01346  292 SVGVRPAYKWSDNFKTAFEVGYDTVKADDGGGVTDDGSLYKLTVAPTFSAGTDFW-SRPELRFYATYSNWNDAALRAFTa 370
                        410       420
                 ....*....|....*....|..
gi 732686671 520 ---FEDNKDDQFAVGAQAEIWW 538
Cdd:cd01346  371 fgsAFGNSKDGWNFGVQVEAWW 392
Sugarporin_N pfam11471
Maltoporin periplasmic N-terminal extension; This domain would appear to be the periplasmic, ...
29-48 1.49e-04

Maltoporin periplasmic N-terminal extension; This domain would appear to be the periplasmic, N-terminal extension of the outer membrane maltoporins, pfam02264, LamB.


:

Pssm-ID: 431901  Cd Length: 31  Bit Score: 39.16  E-value: 1.49e-04
                          10        20
                  ....*....|....*....|
gi 732686671   29 TVEQRLELLEKALRETQSEL 48
Cdd:pfam11471   1 TVEQRLAALEKRLQEAEARA 20
 
Name Accession Description Interval E-value
Maltoporin-like cd01346
The Maltoporin-like channels (LamB porin) form a trimeric structure which facilitate the ...
125-538 2.21e-137

The Maltoporin-like channels (LamB porin) form a trimeric structure which facilitate the diffusion of maltodextrins and other sugars across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an 18-strand antiparallel beta-barrel (18,22). Loop 3 folds into the core to constrict pore size. Long irregular loops are found on the extracelllular side, while short turns are in the periplasm.Tightly-bound water molecules are found in the eyelet of the passage, and only substrates that can displace and replace the broken hydrogen bonds are likely to enter the pore. In the MPR structure, loops 4,6, and 9 have the greatest mobility and are highly variable; these are postulated to attract maltodextrins.


Pssm-ID: 238656  Cd Length: 392  Bit Score: 403.30  E-value: 2.21e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 125 FSYNGYYRSGWGTASHGSPKS----WAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDAVVMMDGNVGQQYSTGWfgdn 200
Cdd:cd01346    1 FEFHGYARSGVGYSDGGGAQTcfagGGGGSVGRLGNECDTYFELGLKKEVYNDNGVTADFVVMVAQGNGQSNDWTF---- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 201 AGGENYMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAAaGVGLENWKVGPGKIDIALVREDVDDY 280
Cdd:cd01346   77 AADDGDLNVRQAYVELKGLLPFLPGATFWAGKRFYRRHDIHILDFYYWNTSGT-GAGIENVQLGDGKLSFALVRSDNQDD 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 281 DRslQNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESASekdnqdnnGYYDWKDTWMFGTSLTQKFDKGGFNEFS 360
Cdd:cd01346  156 DT--TYDSDTNLNAIDLRYAGIPLNPGGSLQLGGKYGFANDSDS--------GYYDAKDGWMLTALHHQKDFLGGFNKTA 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 361 FLVANNSIASNFGRYAGaspfttfngrYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNDIYSYetgaHSDFESI 440
Cdd:cd01346  226 LQYGTGAGSGQGGSGGD----------YGGLDDGASSWRLAEYGEWQLGDRFGGGVALVYQRGNDPYGY----GDDYQWA 291
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 441 RAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTSMLtSRPEIRFYATYIKALENELDGFT- 519
Cdd:cd01346  292 SVGVRPAYKWSDNFKTAFEVGYDTVKADDGGGVTDDGSLYKLTVAPTFSAGTDFW-SRPELRFYATYSNWNDAALRAFTa 370
                        410       420
                 ....*....|....*....|..
gi 732686671 520 ---FEDNKDDQFAVGAQAEIWW 538
Cdd:cd01346  371 fgsAFGNSKDGWNFGVQVEAWW 392
LamB pfam02264
LamB porin; Maltoporin (LamB protein) forms a trimeric structure which facilitates the ...
128-538 2.61e-111

LamB porin; Maltoporin (LamB protein) forms a trimeric structure which facilitates the diffusion of maltodextrins across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an antiparallel beta-barrel.


Pssm-ID: 426687  Cd Length: 385  Bit Score: 336.20  E-value: 2.61e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  128 NGYYRSGWGTASHGSpKSWAIGSLG-----RFGNEYSGWFDLQLKQRVYNENGKRVDAVVMMdgnvGQQYSTGWFGDnag 202
Cdd:pfam02264   1 HGYARSGVGFSGGGG-SQVCFQAGGaggkyRLGNECDTYGELQLGKELTKEDGAKFKFDVML----AYSSSGSNDWE--- 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  203 gENYMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDaAAGVGLENWKVGPGKIDIALVREDVDDYDR 282
Cdd:pfam02264  73 -GTDFNLRQAYVEASNLLPFLPEATLWAGKRFYRRNDIHINDFYYWDLS-GTGAGVEDIDLGFGKLSVALYRGDSDDLSS 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  283 SlqNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESasekdNQDNNGYYDWKDTWMFGTSLTQKFDkGGFNEFSFL 362
Cdd:pfam02264 151 V--YNGDVNNNRLDLRLTGIPLNPGGKLELGLDYGFANGN-----DDQTLGDYAADDGWMLTLQHTQDFL-GGFNKLALQ 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  363 VANNSIASNFGRYAGASPFTTFNgryygdhtGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNDIYsyetGAHSDFESIRA 442
Cdd:pfam02264 223 YGTGLGAGNGAGGSGGGLTNDPP--------DAKSFRVVEQGVWQLSDRFSLMYALVYQKSDDGT----DNGDDYTWLSA 290
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  443 VVRPAYIWDQYNQTGVELGYFTQQNKDansNKFNESGYKTTLFHTFKVNTSMLtSRPEIRFYATYIK---ALENELDGFT 519
Cdd:pfam02264 291 GVRPMYAWTDNFKLLLELGYDYVDDKG---NDALGGLYKFTLAPTLKAGSGFW-SRPELRLFATYANwndAADGALAGGG 366
                         410
                  ....*....|....*....
gi 732686671  520 FEDNKDDQFAVGAQAEIWW 538
Cdd:pfam02264 367 GFGGDTSGWNFGVQAEAWW 385
lamB PRK09360
maltoporin LamB;
127-538 1.29e-61

maltoporin LamB;


Pssm-ID: 236481  Cd Length: 415  Bit Score: 208.30  E-value: 1.29e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 127 YNGYYRSGWGTASHGSP----KSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKR--VDAVVMMDGNVGQQYSTGWFGdn 200
Cdd:PRK09360  28 FHGYARSGIGWTGSGGEqqcfQTTGAQSKYRLGNECETYAELKLGQELWKEGDKSfyFDSMVAYSVNQQNDWESTDPA-- 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 201 aggenymqFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLD---WKTqrtdAAAGVGLENWKVGPGKIDIALVRED- 276
Cdd:PRK09360 106 --------LREFNVQAKNLIEWLPGATLWAGKRFYQRHDVHMIDfyyWDI----SGPGAGIENIDLGFGKLSLAWTRNTe 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 277 -----VDDYDRSLQNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANEsaseKDNQDNNGYYDwKDTWMFGTSLTQKF 351
Cdd:PRK09360 174 nggsySFASNNIYDYTNDTANDVFDVRLAGIETNPGGSLELGVDYGRANL----TDGYKLADGAS-KDGVMFTAEHTQSL 248
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 352 DkGGFNEFSFLVANNSIAS-NFGRYAGASPFTtfngryygdhtGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNdiysye 430
Cdd:PRK09360 249 L-GGFNKFVVQYATDSMTSqGKGHSQGSSINN-----------NGHMLRVIDHGAISLGDKWEMMYVLMYQDID------ 310
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 431 TGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFtqqNKDANSNKFNESGYKTTLFHTFKVNTSMLtSRPEIRFYATYIKA 510
Cdd:PRK09360 311 WDNNNGTTWYSVGVRPMYKWTPIMSTLLEAGYD---NVKSQRTGDKNNQYKITLAQQWQAGDSIW-SRPAIRVFATYAKW 386
                        410       420
                 ....*....|....*....|....*....
gi 732686671 511 LE-NELDGFTFEDNKDDQFAVGAQAEIWW 538
Cdd:PRK09360 387 DEkTDENGNSFSRGDDDEWTFGAQMEAWW 415
LamB COG4580
Maltoporin (phage lambda and maltose receptor) [Carbohydrate transport and metabolism];
124-538 4.67e-56

Maltoporin (phage lambda and maltose receptor) [Carbohydrate transport and metabolism];


Pssm-ID: 443637  Cd Length: 408  Bit Score: 193.22  E-value: 4.67e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 124 GFSYNGYYRSGWG-TASHGSPKSWAI---GSLGRFGNEYSGWFDLQLKQRVYNENGKRVDAVVMMDGNVGQqySTGWFGD 199
Cdd:COG4580   24 AVDFHGYLRSGIGaSSDGGEQQCFQLpgaGSKYRLGNECDTYAELGLGQELYKEDGKTFYVDSMLAYSNDQ--SNDWEST 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 200 NAGGENYmQFSDMYVTTKGFLPFAPEADFWVGK-----HgapkiEIQMLD---WKTQrtdaAAGVGLENWKVGPGKIDIA 271
Cdd:COG4580  102 NGDDGDF-ALRQAYVQAKGLIPALPGATFWAGKryyqrH-----DVHINDfyyWNIS----GPGAGIENIDLGFGKLSYA 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 272 LVREDVDDYDRSlqNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESasekdnqdnNGYYDWKDTWMFGTSLTQKF 351
Cdd:COG4580  172 WTRNDENDGSNS--GDQDVNVNRHDVRLAGIKVNPGGKLELGVDYGRANGT---------DGQKDAKNGWMLTAEHTQGN 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 352 DKGGFNEFSFLVANNSIAS-NFGRYAGASpfttfngryygDHTGGTAVRLTSQGEAYIGDHFIVANAIVYsfGNDIysyE 430
Cdd:COG4580  241 FLGGFNKLALQYGTGAGALqGLGGTGDTS-----------ADNDAKSWRVIDHGVWQLTDRFSGMYVAVY--QKDD---D 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 431 TGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKfnesGYKTTLFHTFKVNTSMLtSRPEIRFYATYIKA 510
Cdd:COG4580  305 RDDGDGQTWYSVGVRPVYAWTENFKLLLEVGYDRVKPQDGDTRR----LTKFTLAPTWSAGPGFW-SRPELRLFATYAKW 379
                        410       420       430
                 ....*....|....*....|....*....|
gi 732686671 511 LENELDGFT--FEDnKDDQFAVGAQAEIWW 538
Cdd:COG4580  380 NEAAQGAATgtFGG-DTSGVTFGVQVEAWW 408
Sugarporin_N pfam11471
Maltoporin periplasmic N-terminal extension; This domain would appear to be the periplasmic, ...
29-48 1.49e-04

Maltoporin periplasmic N-terminal extension; This domain would appear to be the periplasmic, N-terminal extension of the outer membrane maltoporins, pfam02264, LamB.


Pssm-ID: 431901  Cd Length: 31  Bit Score: 39.16  E-value: 1.49e-04
                          10        20
                  ....*....|....*....|
gi 732686671   29 TVEQRLELLEKALRETQSEL 48
Cdd:pfam11471   1 TVEQRLAALEKRLQEAEARA 20
 
Name Accession Description Interval E-value
Maltoporin-like cd01346
The Maltoporin-like channels (LamB porin) form a trimeric structure which facilitate the ...
125-538 2.21e-137

The Maltoporin-like channels (LamB porin) form a trimeric structure which facilitate the diffusion of maltodextrins and other sugars across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an 18-strand antiparallel beta-barrel (18,22). Loop 3 folds into the core to constrict pore size. Long irregular loops are found on the extracelllular side, while short turns are in the periplasm.Tightly-bound water molecules are found in the eyelet of the passage, and only substrates that can displace and replace the broken hydrogen bonds are likely to enter the pore. In the MPR structure, loops 4,6, and 9 have the greatest mobility and are highly variable; these are postulated to attract maltodextrins.


Pssm-ID: 238656  Cd Length: 392  Bit Score: 403.30  E-value: 2.21e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 125 FSYNGYYRSGWGTASHGSPKS----WAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDAVVMMDGNVGQQYSTGWfgdn 200
Cdd:cd01346    1 FEFHGYARSGVGYSDGGGAQTcfagGGGGSVGRLGNECDTYFELGLKKEVYNDNGVTADFVVMVAQGNGQSNDWTF---- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 201 AGGENYMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAAaGVGLENWKVGPGKIDIALVREDVDDY 280
Cdd:cd01346   77 AADDGDLNVRQAYVELKGLLPFLPGATFWAGKRFYRRHDIHILDFYYWNTSGT-GAGIENVQLGDGKLSFALVRSDNQDD 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 281 DRslQNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESASekdnqdnnGYYDWKDTWMFGTSLTQKFDKGGFNEFS 360
Cdd:cd01346  156 DT--TYDSDTNLNAIDLRYAGIPLNPGGSLQLGGKYGFANDSDS--------GYYDAKDGWMLTALHHQKDFLGGFNKTA 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 361 FLVANNSIASNFGRYAGaspfttfngrYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNDIYSYetgaHSDFESI 440
Cdd:cd01346  226 LQYGTGAGSGQGGSGGD----------YGGLDDGASSWRLAEYGEWQLGDRFGGGVALVYQRGNDPYGY----GDDYQWA 291
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 441 RAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTSMLtSRPEIRFYATYIKALENELDGFT- 519
Cdd:cd01346  292 SVGVRPAYKWSDNFKTAFEVGYDTVKADDGGGVTDDGSLYKLTVAPTFSAGTDFW-SRPELRFYATYSNWNDAALRAFTa 370
                        410       420
                 ....*....|....*....|..
gi 732686671 520 ---FEDNKDDQFAVGAQAEIWW 538
Cdd:cd01346  371 fgsAFGNSKDGWNFGVQVEAWW 392
LamB pfam02264
LamB porin; Maltoporin (LamB protein) forms a trimeric structure which facilitates the ...
128-538 2.61e-111

LamB porin; Maltoporin (LamB protein) forms a trimeric structure which facilitates the diffusion of maltodextrins across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an antiparallel beta-barrel.


Pssm-ID: 426687  Cd Length: 385  Bit Score: 336.20  E-value: 2.61e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  128 NGYYRSGWGTASHGSpKSWAIGSLG-----RFGNEYSGWFDLQLKQRVYNENGKRVDAVVMMdgnvGQQYSTGWFGDnag 202
Cdd:pfam02264   1 HGYARSGVGFSGGGG-SQVCFQAGGaggkyRLGNECDTYGELQLGKELTKEDGAKFKFDVML----AYSSSGSNDWE--- 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  203 gENYMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDaAAGVGLENWKVGPGKIDIALVREDVDDYDR 282
Cdd:pfam02264  73 -GTDFNLRQAYVEASNLLPFLPEATLWAGKRFYRRNDIHINDFYYWDLS-GTGAGVEDIDLGFGKLSVALYRGDSDDLSS 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  283 SlqNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESasekdNQDNNGYYDWKDTWMFGTSLTQKFDkGGFNEFSFL 362
Cdd:pfam02264 151 V--YNGDVNNNRLDLRLTGIPLNPGGKLELGLDYGFANGN-----DDQTLGDYAADDGWMLTLQHTQDFL-GGFNKLALQ 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  363 VANNSIASNFGRYAGASPFTTFNgryygdhtGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNDIYsyetGAHSDFESIRA 442
Cdd:pfam02264 223 YGTGLGAGNGAGGSGGGLTNDPP--------DAKSFRVVEQGVWQLSDRFSLMYALVYQKSDDGT----DNGDDYTWLSA 290
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671  443 VVRPAYIWDQYNQTGVELGYFTQQNKDansNKFNESGYKTTLFHTFKVNTSMLtSRPEIRFYATYIK---ALENELDGFT 519
Cdd:pfam02264 291 GVRPMYAWTDNFKLLLELGYDYVDDKG---NDALGGLYKFTLAPTLKAGSGFW-SRPELRLFATYANwndAADGALAGGG 366
                         410
                  ....*....|....*....
gi 732686671  520 FEDNKDDQFAVGAQAEIWW 538
Cdd:pfam02264 367 GFGGDTSGWNFGVQAEAWW 385
lamB PRK09360
maltoporin LamB;
127-538 1.29e-61

maltoporin LamB;


Pssm-ID: 236481  Cd Length: 415  Bit Score: 208.30  E-value: 1.29e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 127 YNGYYRSGWGTASHGSP----KSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKR--VDAVVMMDGNVGQQYSTGWFGdn 200
Cdd:PRK09360  28 FHGYARSGIGWTGSGGEqqcfQTTGAQSKYRLGNECETYAELKLGQELWKEGDKSfyFDSMVAYSVNQQNDWESTDPA-- 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 201 aggenymqFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLD---WKTqrtdAAAGVGLENWKVGPGKIDIALVRED- 276
Cdd:PRK09360 106 --------LREFNVQAKNLIEWLPGATLWAGKRFYQRHDVHMIDfyyWDI----SGPGAGIENIDLGFGKLSLAWTRNTe 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 277 -----VDDYDRSLQNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANEsaseKDNQDNNGYYDwKDTWMFGTSLTQKF 351
Cdd:PRK09360 174 nggsySFASNNIYDYTNDTANDVFDVRLAGIETNPGGSLELGVDYGRANL----TDGYKLADGAS-KDGVMFTAEHTQSL 248
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 352 DkGGFNEFSFLVANNSIAS-NFGRYAGASPFTtfngryygdhtGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNdiysye 430
Cdd:PRK09360 249 L-GGFNKFVVQYATDSMTSqGKGHSQGSSINN-----------NGHMLRVIDHGAISLGDKWEMMYVLMYQDID------ 310
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 431 TGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFtqqNKDANSNKFNESGYKTTLFHTFKVNTSMLtSRPEIRFYATYIKA 510
Cdd:PRK09360 311 WDNNNGTTWYSVGVRPMYKWTPIMSTLLEAGYD---NVKSQRTGDKNNQYKITLAQQWQAGDSIW-SRPAIRVFATYAKW 386
                        410       420
                 ....*....|....*....|....*....
gi 732686671 511 LE-NELDGFTFEDNKDDQFAVGAQAEIWW 538
Cdd:PRK09360 387 DEkTDENGNSFSRGDDDEWTFGAQMEAWW 415
LamB COG4580
Maltoporin (phage lambda and maltose receptor) [Carbohydrate transport and metabolism];
124-538 4.67e-56

Maltoporin (phage lambda and maltose receptor) [Carbohydrate transport and metabolism];


Pssm-ID: 443637  Cd Length: 408  Bit Score: 193.22  E-value: 4.67e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 124 GFSYNGYYRSGWG-TASHGSPKSWAI---GSLGRFGNEYSGWFDLQLKQRVYNENGKRVDAVVMMDGNVGQqySTGWFGD 199
Cdd:COG4580   24 AVDFHGYLRSGIGaSSDGGEQQCFQLpgaGSKYRLGNECDTYAELGLGQELYKEDGKTFYVDSMLAYSNDQ--SNDWEST 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 200 NAGGENYmQFSDMYVTTKGFLPFAPEADFWVGK-----HgapkiEIQMLD---WKTQrtdaAAGVGLENWKVGPGKIDIA 271
Cdd:COG4580  102 NGDDGDF-ALRQAYVQAKGLIPALPGATFWAGKryyqrH-----DVHINDfyyWNIS----GPGAGIENIDLGFGKLSYA 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 272 LVREDVDDYDRSlqNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESasekdnqdnNGYYDWKDTWMFGTSLTQKF 351
Cdd:COG4580  172 WTRNDENDGSNS--GDQDVNVNRHDVRLAGIKVNPGGKLELGVDYGRANGT---------DGQKDAKNGWMLTAEHTQGN 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 352 DKGGFNEFSFLVANNSIAS-NFGRYAGASpfttfngryygDHTGGTAVRLTSQGEAYIGDHFIVANAIVYsfGNDIysyE 430
Cdd:COG4580  241 FLGGFNKLALQYGTGAGALqGLGGTGDTS-----------ADNDAKSWRVIDHGVWQLTDRFSGMYVAVY--QKDD---D 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 431 TGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKfnesGYKTTLFHTFKVNTSMLtSRPEIRFYATYIKA 510
Cdd:COG4580  305 RDDGDGQTWYSVGVRPVYAWTENFKLLLEVGYDRVKPQDGDTRR----LTKFTLAPTWSAGPGFW-SRPELRLFATYAKW 379
                        410       420       430
                 ....*....|....*....|....*....|
gi 732686671 511 LENELDGFT--FEDnKDDQFAVGAQAEIWW 538
Cdd:COG4580  380 NEAAQGAATgtFGG-DTSGVTFGVQVEAWW 408
PRK12395 PRK12395
maltoporin; Provisional
127-538 4.70e-38

maltoporin; Provisional


Pssm-ID: 183498  Cd Length: 419  Bit Score: 144.72  E-value: 4.70e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 127 YNGYYRSGWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKR--VDAVVMMDGNvGQQYSTGWFGDNAgge 204
Cdd:PRK12395  29 FHGYMRAGVGVSSDGGLAEWQKTMVGRLGNESDTYGEIGLGAEVYKKEDVSfyLDSMVSMLSD-GSNDSETTIGDDA--- 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 205 nymQFS--DMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTdAAAGVGLENWKVGPGKIDIALVREDVDDYDR 282
Cdd:PRK12395 105 ---QFGlrQLNLQIKGLIPGDKEAVIWGGKRYYQRHDLHIIDTKYWNI-SGSGAGIENYTVGPGAVSVAWVRGDANDVDT 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 283 SLQNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESaseKDNQDNNGYYDWKDTWMFGTSLTQKFdKGGFNEFSFL 362
Cdd:PRK12395 181 RITGDSDVNINYIDVRYAGFKPWAGSWTEVGIDYAMPNPT---KQQKEYGGLYDADNAVMLTGEISQDM-FGGYNKLVLQ 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 363 VANNSIASNFGRYAGaspfttfnGRY--YGDHTGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNDIysyeTGAHSDFESI 440
Cdd:PRK12395 257 YANKGLAQNMISQGG--------GWYdmWHKTDEAKGYRVINTGLIPITDKFSFNHVLTWGSANDI----TEYTDKTNLI 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 732686671 441 RAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTSMLtSRPEIRFYATYikaLENELDGFTF 520
Cdd:PRK12395 325 SLVGRAQYQFTQYVRAIGEVGGFYQKDTYHNGSNYKQGGEKYTIALGLAEGPDFL-SRPELRVFASY---LNDSENGKPF 400
                        410
                 ....*....|....*....
gi 732686671 521 EDN-KDDQFAVGAQAEIWW 538
Cdd:PRK12395 401 EDGtSNDTWNFGVQVEAWW 419
Sugarporin_N pfam11471
Maltoporin periplasmic N-terminal extension; This domain would appear to be the periplasmic, ...
29-48 1.49e-04

Maltoporin periplasmic N-terminal extension; This domain would appear to be the periplasmic, N-terminal extension of the outer membrane maltoporins, pfam02264, LamB.


Pssm-ID: 431901  Cd Length: 31  Bit Score: 39.16  E-value: 1.49e-04
                          10        20
                  ....*....|....*....|
gi 732686671   29 TVEQRLELLEKALRETQSEL 48
Cdd:pfam11471   1 TVEQRLAALEKRLQEAEARA 20
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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