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Conserved domains on  [gi|985002918|gb|AMC97004|]
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entericidin A [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

similar to entericidin A( domain architecture ID 10013347)

protein similar to entericidin A

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09810 PRK09810
lipoprotein antitoxin entericidin A;
1-41 2.71e-15

lipoprotein antitoxin entericidin A;


:

Pssm-ID: 137533  Cd Length: 41  Bit Score: 61.19  E-value: 2.71e-15
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
gi 985002918  1 MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS 41
Cdd:PRK09810  1 MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS 41
 
Name Accession Description Interval E-value
PRK09810 PRK09810
lipoprotein antitoxin entericidin A;
1-41 2.71e-15

lipoprotein antitoxin entericidin A;


Pssm-ID: 137533  Cd Length: 41  Bit Score: 61.19  E-value: 2.71e-15
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
gi 985002918  1 MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS 41
Cdd:PRK09810  1 MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS 41
COG5510 COG5510
Predicted small secreted protein [Function unknown];
2-41 3.48e-12

Predicted small secreted protein [Function unknown];


Pssm-ID: 444261  Cd Length: 45  Bit Score: 53.31  E-value: 3.48e-12
                        10        20        30        40
                ....*....|....*....|....*....|....*....|..
gi 985002918  2 MKRLI--VLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS 41
Cdd:COG5510   1 MKKLIllLLLLLLALLLAGCNTVKGAGEDIESGGEAIEDAAE 42
Entericidin pfam08085
Entericidin EcnA/B family; This family consists of the entericidin antidote/toxin peptides. ...
 21-40 1.32e-04

Entericidin EcnA/B family; This family consists of the entericidin antidote/toxin peptides. The entericidin locus is activated in stationary phase under high osmolarity conditions by rho-S and simultaneously repressed by the osmoregulatory EnvZ/OmpR signal transduction pathway. The entericidin locus encodes tandem paralogous genes (ecnAB) and directs the synthesis of two small cell-envelope lipoproteins which can maintain plasmids in bacterial population by means of post-segregational killing.


Pssm-ID: 429826  Cd Length: 20  Bit Score: 33.81  E-value: 1.32e-04
                         10        20
                 ....*....|....*....|
gi 985002918  21 TARGFGEDIKHLGNSISRAA 40
Cdd:pfam08085  1 TVEGAGQDIQAGGEAIEDAA 20
 
Name Accession Description Interval E-value
PRK09810 PRK09810
lipoprotein antitoxin entericidin A;
1-41 2.71e-15

lipoprotein antitoxin entericidin A;


Pssm-ID: 137533  Cd Length: 41  Bit Score: 61.19  E-value: 2.71e-15
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
gi 985002918  1 MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS 41
Cdd:PRK09810  1 MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS 41
COG5510 COG5510
Predicted small secreted protein [Function unknown];
2-41 3.48e-12

Predicted small secreted protein [Function unknown];


Pssm-ID: 444261  Cd Length: 45  Bit Score: 53.31  E-value: 3.48e-12
                        10        20        30        40
                ....*....|....*....|....*....|....*....|..
gi 985002918  2 MKRLI--VLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS 41
Cdd:COG5510   1 MKKLIllLLLLLLALLLAGCNTVKGAGEDIESGGEAIEDAAE 42
PRK10081 PRK10081
lipoprotein toxin entericidin B;
1-41 5.56e-07

lipoprotein toxin entericidin B;


Pssm-ID: 170240  Cd Length: 48  Bit Score: 40.44  E-value: 5.56e-07
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 985002918  1 MMKRLIVL---VLLASTLLTGCNTARGFGEDIKHLGNSISRAAS 41
Cdd:PRK10081  1 MVKKTIAAifsVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT 44
CutF COG3015
Uncharacterized lipoprotein NlpE involved in copper resistance [Cell wall/membrane/envelope ...
 2-22 7.28e-05

Uncharacterized lipoprotein NlpE involved in copper resistance [Cell wall/membrane/envelope biogenesis, Defense mechanisms];


Pssm-ID: 442252  Cd Length: 147  Bit Score: 36.51  E-value: 7.28e-05
                         10        20
                 ....*....|....*....|.
gi 985002918   2 MKRLIVLVLLASTLLTGCNTA 22
Cdd:COG3015    1 MKKILLLLLLAALLLAGCNNR 21
Entericidin pfam08085
Entericidin EcnA/B family; This family consists of the entericidin antidote/toxin peptides. ...
 21-40 1.32e-04

Entericidin EcnA/B family; This family consists of the entericidin antidote/toxin peptides. The entericidin locus is activated in stationary phase under high osmolarity conditions by rho-S and simultaneously repressed by the osmoregulatory EnvZ/OmpR signal transduction pathway. The entericidin locus encodes tandem paralogous genes (ecnAB) and directs the synthesis of two small cell-envelope lipoproteins which can maintain plasmids in bacterial population by means of post-segregational killing.


Pssm-ID: 429826  Cd Length: 20  Bit Score: 33.81  E-value: 1.32e-04
                         10        20
                 ....*....|....*....|
gi 985002918  21 TARGFGEDIKHLGNSISRAA 40
Cdd:pfam08085  1 TVEGAGQDIQAGGEAIEDAA 20
PRK09967 PRK09967
OmpA family protein;
1-24 1.03e-03

OmpA family protein;


Pssm-ID: 182172 [Multi-domain]  Cd Length: 160  Bit Score: 33.80  E-value: 1.03e-03
                         10        20
                 ....*....|....*....|....
gi 985002918   1 MMKRLIVLVLLASTLLTGCNTARG 24
Cdd:PRK09967   1 MIKHLVAPLIFTSLILTGCQSPQG 24
PRK10523 PRK10523
envelope stress response activation lipoprotein NlpE;
1-21 5.53e-03

envelope stress response activation lipoprotein NlpE;


Pssm-ID: 236708 [Multi-domain]  Cd Length: 234  Bit Score: 31.58  E-value: 5.53e-03
                         10        20
                 ....*....|....*....|...
gi 985002918   1 MMKRLIVLVLLASTLLT--GCNT 21
Cdd:PRK10523   1 MMKKAIITALAAAGLFTlmGCNN 23
NosL COG4314
Nitrous oxide reductase accessory protein NosL [Inorganic ion transport and metabolism];
1-22 9.19e-03

Nitrous oxide reductase accessory protein NosL [Inorganic ion transport and metabolism];


Pssm-ID: 443455  Cd Length: 156  Bit Score: 31.08  E-value: 9.19e-03
                         10        20
                 ....*....|....*....|..
gi 985002918   1 MMKRLIVLVLLASTLLTGCNTA 22
Cdd:COG4314    1 MMRRLLLAALALLLLLAGCGGG 22
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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