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Conserved domains on  [gi|985004696|gb|AMC98782|]
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hypothetical protein AW869_22245 [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

YebW family protein( domain architecture ID 10538340)

YebW family protein similar to Escherichia coli protein YebW

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1482 pfam07358
Protein of unknown function (DUF1482); This family consists of several Enterobacterial ...
 4-61 4.23e-24

Protein of unknown function (DUF1482); This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.


:

Pssm-ID: 369331  Cd Length: 57  Bit Score: 84.79  E-value: 4.23e-24
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 985004696   4 AFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKI-PGNCYPVDKVIhqDNIEIPA 61
Cdd:pfam07358  1 MFALVLTVCYLGGGCQDLVVGVYNTEQQCLAAMEEQKIrNGGCYPIEDVI--DGYWIPA 57
 
Name Accession Description Interval E-value
DUF1482 pfam07358
Protein of unknown function (DUF1482); This family consists of several Enterobacterial ...
 4-61 4.23e-24

Protein of unknown function (DUF1482); This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.


Pssm-ID: 369331  Cd Length: 57  Bit Score: 84.79  E-value: 4.23e-24
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 985004696   4 AFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKI-PGNCYPVDKVIhqDNIEIPA 61
Cdd:pfam07358  1 MFALVLTVCYLGGGCQDLVVGVYNTEQQCLAAMEEQKIrNGGCYPIEDVI--DGYWIPA 57
 
Name Accession Description Interval E-value
DUF1482 pfam07358
Protein of unknown function (DUF1482); This family consists of several Enterobacterial ...
 4-61 4.23e-24

Protein of unknown function (DUF1482); This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.


Pssm-ID: 369331  Cd Length: 57  Bit Score: 84.79  E-value: 4.23e-24
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 985004696   4 AFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKI-PGNCYPVDKVIhqDNIEIPA 61
Cdd:pfam07358  1 MFALVLTVCYLGGGCQDLVVGVYNTEQQCLAAMEEQKIrNGGCYPIEDVI--DGYWIPA 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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