View
Concise Results
Standard Results
Full Results
D-serine transporter DsdX [Citrobacter amalonaticus]
Protein Classification
D-serine transporter DsdX ( domain architecture ID 10013375 )
D-serine transporter DsdX is a D-serine-specific transporter that may function as a H(+) symporter
List of domain hits
Name
Accession
Description
Interval
E-value
PRK09921
PRK09921 permease DsdX; Provisional
1-445
0e+00
permease DsdX; Provisional
Pssm-ID: 182147
Cd Length: 445
Bit Score: 770.47
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 1 MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGMGPL D MVNAIESGIGGTLGFLAAVIGLGTILGKMM 80
Cdd:PRK09921 1 MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGMGPL E MVNAIESGIGGTLGFLAAVIGLGTILGKMM 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 81 EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP 160
Cdd:PRK09921 81 EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 161 HPAALFVANKLGADIGSVIVYGLLVGLMASL I GGPLFLKFLGNRLPFKPVP A EFADL K VR E E S TLPSLGATLFTVLLPIG 240
Cdd:PRK09921 161 HPAALFVANKLGADIGSVIVYGLLVGLMASL V GGPLFLKFLGNRLPFKPVP T EFADL E VR D E K TLPSLGATLFTVLLPIG 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 241 LMLVKTVAELNM T K GS TLYTLLEFIGNPITAMFIAVFVAYYILG L RQH I GM SA LLTHTENGFGSIANILLIIGAGGAFNA 320
Cdd:PRK09921 241 LMLVKTVAELNM A K EG TLYTLLEFIGNPITAMFIAVFVAYYILG I RQH M GM GT LLTHTENGFGSIANILLIIGAGGAFNA 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 321 ILKSSGLADTLAVILSNM D MHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYP NV SPEIIAIAIGSGAIGCTIV 400
Cdd:PRK09921 321 ILKSSGLADTLAVILSNM H MHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYP DI SPEIIAIAIGSGAIGCTIV 400
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 991929335 401 TDSLFWLVKQYCGATLNETFKYYTTATFIASV I ALA C TFLLSFII 445
Cdd:PRK09921 401 TDSLFWLVKQYCGATLNETFKYYTTATFIASV V ALA G TFLLSFII 445
Name
Accession
Description
Interval
E-value
PRK09921
PRK09921 permease DsdX; Provisional
1-445
0e+00
permease DsdX; Provisional
Pssm-ID: 182147
Cd Length: 445
Bit Score: 770.47
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 1 MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGMGPL D MVNAIESGIGGTLGFLAAVIGLGTILGKMM 80
Cdd:PRK09921 1 MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGMGPL E MVNAIESGIGGTLGFLAAVIGLGTILGKMM 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 81 EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP 160
Cdd:PRK09921 81 EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 161 HPAALFVANKLGADIGSVIVYGLLVGLMASL I GGPLFLKFLGNRLPFKPVP A EFADL K VR E E S TLPSLGATLFTVLLPIG 240
Cdd:PRK09921 161 HPAALFVANKLGADIGSVIVYGLLVGLMASL V GGPLFLKFLGNRLPFKPVP T EFADL E VR D E K TLPSLGATLFTVLLPIG 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 241 LMLVKTVAELNM T K GS TLYTLLEFIGNPITAMFIAVFVAYYILG L RQH I GM SA LLTHTENGFGSIANILLIIGAGGAFNA 320
Cdd:PRK09921 241 LMLVKTVAELNM A K EG TLYTLLEFIGNPITAMFIAVFVAYYILG I RQH M GM GT LLTHTENGFGSIANILLIIGAGGAFNA 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 321 ILKSSGLADTLAVILSNM D MHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYP NV SPEIIAIAIGSGAIGCTIV 400
Cdd:PRK09921 321 ILKSSGLADTLAVILSNM H MHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYP DI SPEIIAIAIGSGAIGCTIV 400
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 991929335 401 TDSLFWLVKQYCGATLNETFKYYTTATFIASV I ALA C TFLLSFII 445
Cdd:PRK09921 401 TDSLFWLVKQYCGATLNETFKYYTTATFIASV V ALA G TFLLSFII 445
gntP
TIGR00791 gluconate transporter; This family includes known gluconate transporters of E. coli and ...
4-445
4.99e-174
gluconate transporter; This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 129873
Cd Length: 440
Bit Score: 494.57
E-value: 4.99e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 4 QIW V VST L L I si VL IV L T I V KFK FHP F L ALL LA SF F VG AMM GM GPLDM V NA IE S GIGGTLGFLA AVI GLG TI LGK MMEV S 83
Cdd:TIGR00791 1 MPL V IVA L G I -- VL LL L L I M KFK LNT F V ALL VV SF G VG LAS GM PLDKV V HS IE A GIGGTLGFLA LIV GLG AM LGK LLAD S 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 84 GAA E RI G LTL QRCRWL S - ADVIM V LV GLI C G IT LF V EVG V VLLIPL A FSIA KKTNT SLLKL A IP LCT AL MAV H CVV PPHP 162
Cdd:TIGR00791 79 GAA Q RI A LTL LAKFGK S r VQWAV V IA GLI V G LA LF F EVG F VLLIPL V FSIA AEAKI SLLKL G IP MVA AL SVA H GFL PPHP 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 163 AALFV AN KL GADIG S V IV YGL L V GLMASL I G GPLF L KFLG NRL P FK P v P A EFADL K VRE E STL PS L G AT LFT V LLP IG LM 242
Cdd:TIGR00791 159 GPTAI AN EY GADIG E V LL YGL I V AIPTVI I A GPLF T KFLG RIV P PS P - E A SLGSQ K TFS E EEM PS F G IS LFT A LLP VI LM 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 243 L VKT V AEL NMT KGST L Y TLL EFIGNP I TAMFIA VF VA Y Y I LG L R QHIG M SALLTHTENGF GSIA N ILLIIG A GGAF NAI L 322
Cdd:TIGR00791 238 A VKT I AEL TLP KGST A Y EVV EFIGNP S TAMFIA LL VA I Y T LG I R RGMP M DQVMDSCGSAI GSIA M ILLIIG G GGAF KQV L 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 323 KS SG LA D TL A VIL S N M DMH PIL L AWL V A L IL HA A V GSATVA MMG A TAI VAP M L PL Y PN V S P EIIAI A I G S G AIGCTI V T D 402
Cdd:TIGR00791 318 ID SG VG D YI A ELM S G M NIS PIL M AWL I A A IL RI A L GSATVA ALT A AGL VAP L L GQ Y SG V N P ALLVL A T G A G SVIASH V N D 397
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 991929335 403 SL FWL V K Q Y C G A T LN ET F K YY T TATF I A SV IA L ACTF LLS FII 445
Cdd:TIGR00791 398 AG FWL F K E Y F G L T VK ET L K TW T LLET I I SV VG L IGVL LLS LVL 440
GntP_permease
pfam02447 GntP family permease; This is a family of integral membrane permeases that are involved in ...
6-444
2.13e-172
GntP family permease; This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter and GntT, a high affinity transporter.
Pssm-ID: 308194 [Multi-domain]
Cd Length: 440
Bit Score: 490.64
E-value: 2.13e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 6 WVVSTLL I S I V L IV L T I V KFK FH PF L ALLL A S FF VG AMM GM GPLDMVNA IE S G I GGTLG F LA AV IGLG TI LGK MMEV SG A 85
Cdd:pfam02447 1 MPLLIVA I G I I L LL L L I I KFK VN PF V ALLL V S LG VG LAS GM PLDKVLKS IE A G F GGTLG S LA II IGLG AM LGK LLAD SG G 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 86 AERI GL TL QRCRWLS - ADVIM VL V G L I C GI T LF V EVG V VLLIPL A F S IA KKTNT SLLKL A IPL CTA L MA VH CVV PPHP AA 164
Cdd:pfam02447 81 AERI AT TL IKKFGKK r VQWAV VL A G F I V GI P LF F EVG F VLLIPL V F A IA REAKI SLLKL G IPL AAG L AV VH GFL PPHP GP 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 165 LFV A NK LGADIG S V IV YGL L V GLMASL I G GPLF L KFLG NRL P FK P VP AE FADL K VRE E ST LPS L G AT LFT V LLP IG LM LV 244
Cdd:pfam02447 161 TAI A GL LGADIG K V LL YGL I V AIPTVI I A GPLF G KFLG RIE P LE P EF AE LGAT K SFD E KE LPS F G LS LFT I LLP VI LM AI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 245 KT V AEL NMT KG STLYTLL EFIGNP IT A MF IA VF VA Y Y I LGLR QHIG M SA L LTHTENGFGS IA N ILLIIGAGGAF NAI L KS 324
Cdd:pfam02447 241 KT I AEL FLP KG HAALEVV EFIGNP VI A LL IA LL VA I Y T LGLR RGMS M QQ L MDILGSALKP IA M ILLIIGAGGAF KQV L VD 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 325 SG LA D T LA VI LS N M DMH PILLAW L VA LI L HA A V GSATVA MMG A TA IV A P MLPLY P N V S P EIIAI A I G S G AIGCTI V T D SL 404
Cdd:pfam02447 321 SG VG D A LA EL LS G M HIS PILLAW I VA AL L RI A Q GSATVA AIT A AG IV S P IIAQL P G V N P ALLVL A T G A G SLILSH V N D AG 400
410 420 430 440
....*....|....*....|....*....|....*....|
gi 991929335 405 FWL V K Q Y C G A T LN ET F K YY T TATF I A SV IA L AC T F LLS FI 444
Cdd:pfam02447 401 FWL F K E Y F G L T VK ET L K TW T VLET I L SV VG L IG T L LLS LV 440
GntT
COG2610 H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and ...
11-445
4.80e-120
H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and metabolism];
Pssm-ID: 442022 [Multi-domain]
Cd Length: 440
Bit Score: 357.11
E-value: 4.80e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 11 LL IS I V L IV L T I V KFK F HPFLALLLA SFF VG AMM GM GPLDM V NA I ES G I GGTLG FLAA VIGLG TI LGK MM E V SGAAERI G 90
Cdd:COG2610 7 LL LA I A L LI L L I I KFK L HPFLALLLA ALL VG LLA GM PLAKI V TS I MT G F GGTLG SIGL VIGLG AM LGK LL E D SGAAERI A 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 91 L T L - QRCRWLS A DVIM VL V G L I C GI TL F VE VG V V L L I PLAFS I A KKTNT S L L KLAIP L CTA L MAV H CV VPP H P AA L FV A N 169
Cdd:COG2610 87 D T I i KKFGEKR A PLAL VL A G F I L GI PV F FD VG F V I L A PLAFS L A RRAGI S K L LIGLA L AAG L STT H ML VPP T P GP L AA A G 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 170 K LGAD I G S VI VY GL L V GLM A s LI G G P L FL K F LG NR -- L P FKPVP A EFA D LKVREEST LPS L G AT L FTV LLPI G L M L VK T V 247
Cdd:COG2610 167 I LGAD L G A VI LL GL I V AIP A - LI V G Y L YA K W LG KK ap V P APEGL A GEE D EEEEDDEE LPS F G LA L LPI LLPI V L I L LG T I 245
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 248 A E L n MT K G S T L YTL L E FIG N PI T A MF I A V F VA YYI lg LR QHIGMSA L LTHTEN G FGSIAN ILLI I GAGGAF N A I L KS SG L 327
Cdd:COG2610 246 A D L - LP K D S A L VQV L A FIG D PI I A LL I G V L VA ILL -- LR RGLSREE L MKILNE G LKPAGL ILLI T GAGGAF G A V L AA SG I 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 328 A D TL A VI LS NMDMH P I LLA W L V A LI L HA A V GSATVAM MG A TA I V AP M L PLY p N VSPE IIAI AIG S G AI G CTI V T DS L FWL 407
Cdd:COG2610 323 G D AI A DA LS GLGLP P L LLA F L I A AL L RG A T GSATVAM IT A AG I L AP L L LAL - G VSPE LLVL AIG A G SG G LSH V N DS G FWL 401
410 420 430
....*....|....*....|....*....|....*...
gi 991929335 408 VK Q Y C G A T LN ET F K YY T TA T F I AS V IA L ACTFL LS FII 445
Cdd:COG2610 402 VK E Y F G L T VK ET L K TW T VM T T I IG V VG L VLVLI LS LLF 439
Name
Accession
Description
Interval
E-value
PRK09921
PRK09921 permease DsdX; Provisional
1-445
0e+00
permease DsdX; Provisional
Pssm-ID: 182147
Cd Length: 445
Bit Score: 770.47
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 1 MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGMGPL D MVNAIESGIGGTLGFLAAVIGLGTILGKMM 80
Cdd:PRK09921 1 MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGMGPL E MVNAIESGIGGTLGFLAAVIGLGTILGKMM 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 81 EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP 160
Cdd:PRK09921 81 EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 161 HPAALFVANKLGADIGSVIVYGLLVGLMASL I GGPLFLKFLGNRLPFKPVP A EFADL K VR E E S TLPSLGATLFTVLLPIG 240
Cdd:PRK09921 161 HPAALFVANKLGADIGSVIVYGLLVGLMASL V GGPLFLKFLGNRLPFKPVP T EFADL E VR D E K TLPSLGATLFTVLLPIG 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 241 LMLVKTVAELNM T K GS TLYTLLEFIGNPITAMFIAVFVAYYILG L RQH I GM SA LLTHTENGFGSIANILLIIGAGGAFNA 320
Cdd:PRK09921 241 LMLVKTVAELNM A K EG TLYTLLEFIGNPITAMFIAVFVAYYILG I RQH M GM GT LLTHTENGFGSIANILLIIGAGGAFNA 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 321 ILKSSGLADTLAVILSNM D MHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYP NV SPEIIAIAIGSGAIGCTIV 400
Cdd:PRK09921 321 ILKSSGLADTLAVILSNM H MHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYP DI SPEIIAIAIGSGAIGCTIV 400
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 991929335 401 TDSLFWLVKQYCGATLNETFKYYTTATFIASV I ALA C TFLLSFII 445
Cdd:PRK09921 401 TDSLFWLVKQYCGATLNETFKYYTTATFIASV V ALA G TFLLSFII 445
gntP
TIGR00791 gluconate transporter; This family includes known gluconate transporters of E. coli and ...
4-445
4.99e-174
gluconate transporter; This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 129873
Cd Length: 440
Bit Score: 494.57
E-value: 4.99e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 4 QIW V VST L L I si VL IV L T I V KFK FHP F L ALL LA SF F VG AMM GM GPLDM V NA IE S GIGGTLGFLA AVI GLG TI LGK MMEV S 83
Cdd:TIGR00791 1 MPL V IVA L G I -- VL LL L L I M KFK LNT F V ALL VV SF G VG LAS GM PLDKV V HS IE A GIGGTLGFLA LIV GLG AM LGK LLAD S 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 84 GAA E RI G LTL QRCRWL S - ADVIM V LV GLI C G IT LF V EVG V VLLIPL A FSIA KKTNT SLLKL A IP LCT AL MAV H CVV PPHP 162
Cdd:TIGR00791 79 GAA Q RI A LTL LAKFGK S r VQWAV V IA GLI V G LA LF F EVG F VLLIPL V FSIA AEAKI SLLKL G IP MVA AL SVA H GFL PPHP 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 163 AALFV AN KL GADIG S V IV YGL L V GLMASL I G GPLF L KFLG NRL P FK P v P A EFADL K VRE E STL PS L G AT LFT V LLP IG LM 242
Cdd:TIGR00791 159 GPTAI AN EY GADIG E V LL YGL I V AIPTVI I A GPLF T KFLG RIV P PS P - E A SLGSQ K TFS E EEM PS F G IS LFT A LLP VI LM 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 243 L VKT V AEL NMT KGST L Y TLL EFIGNP I TAMFIA VF VA Y Y I LG L R QHIG M SALLTHTENGF GSIA N ILLIIG A GGAF NAI L 322
Cdd:TIGR00791 238 A VKT I AEL TLP KGST A Y EVV EFIGNP S TAMFIA LL VA I Y T LG I R RGMP M DQVMDSCGSAI GSIA M ILLIIG G GGAF KQV L 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 323 KS SG LA D TL A VIL S N M DMH PIL L AWL V A L IL HA A V GSATVA MMG A TAI VAP M L PL Y PN V S P EIIAI A I G S G AIGCTI V T D 402
Cdd:TIGR00791 318 ID SG VG D YI A ELM S G M NIS PIL M AWL I A A IL RI A L GSATVA ALT A AGL VAP L L GQ Y SG V N P ALLVL A T G A G SVIASH V N D 397
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 991929335 403 SL FWL V K Q Y C G A T LN ET F K YY T TATF I A SV IA L ACTF LLS FII 445
Cdd:TIGR00791 398 AG FWL F K E Y F G L T VK ET L K TW T LLET I I SV VG L IGVL LLS LVL 440
GntP_permease
pfam02447 GntP family permease; This is a family of integral membrane permeases that are involved in ...
6-444
2.13e-172
GntP family permease; This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter and GntT, a high affinity transporter.
Pssm-ID: 308194 [Multi-domain]
Cd Length: 440
Bit Score: 490.64
E-value: 2.13e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 6 WVVSTLL I S I V L IV L T I V KFK FH PF L ALLL A S FF VG AMM GM GPLDMVNA IE S G I GGTLG F LA AV IGLG TI LGK MMEV SG A 85
Cdd:pfam02447 1 MPLLIVA I G I I L LL L L I I KFK VN PF V ALLL V S LG VG LAS GM PLDKVLKS IE A G F GGTLG S LA II IGLG AM LGK LLAD SG G 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 86 AERI GL TL QRCRWLS - ADVIM VL V G L I C GI T LF V EVG V VLLIPL A F S IA KKTNT SLLKL A IPL CTA L MA VH CVV PPHP AA 164
Cdd:pfam02447 81 AERI AT TL IKKFGKK r VQWAV VL A G F I V GI P LF F EVG F VLLIPL V F A IA REAKI SLLKL G IPL AAG L AV VH GFL PPHP GP 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 165 LFV A NK LGADIG S V IV YGL L V GLMASL I G GPLF L KFLG NRL P FK P VP AE FADL K VRE E ST LPS L G AT LFT V LLP IG LM LV 244
Cdd:pfam02447 161 TAI A GL LGADIG K V LL YGL I V AIPTVI I A GPLF G KFLG RIE P LE P EF AE LGAT K SFD E KE LPS F G LS LFT I LLP VI LM AI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 245 KT V AEL NMT KG STLYTLL EFIGNP IT A MF IA VF VA Y Y I LGLR QHIG M SA L LTHTENGFGS IA N ILLIIGAGGAF NAI L KS 324
Cdd:pfam02447 241 KT I AEL FLP KG HAALEVV EFIGNP VI A LL IA LL VA I Y T LGLR RGMS M QQ L MDILGSALKP IA M ILLIIGAGGAF KQV L VD 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 325 SG LA D T LA VI LS N M DMH PILLAW L VA LI L HA A V GSATVA MMG A TA IV A P MLPLY P N V S P EIIAI A I G S G AIGCTI V T D SL 404
Cdd:pfam02447 321 SG VG D A LA EL LS G M HIS PILLAW I VA AL L RI A Q GSATVA AIT A AG IV S P IIAQL P G V N P ALLVL A T G A G SLILSH V N D AG 400
410 420 430 440
....*....|....*....|....*....|....*....|
gi 991929335 405 FWL V K Q Y C G A T LN ET F K YY T TATF I A SV IA L AC T F LLS FI 444
Cdd:pfam02447 401 FWL F K E Y F G L T VK ET L K TW T VLET I L SV VG L IG T L LLS LV 440
GntT
COG2610 H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and ...
11-445
4.80e-120
H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and metabolism];
Pssm-ID: 442022 [Multi-domain]
Cd Length: 440
Bit Score: 357.11
E-value: 4.80e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 11 LL IS I V L IV L T I V KFK F HPFLALLLA SFF VG AMM GM GPLDM V NA I ES G I GGTLG FLAA VIGLG TI LGK MM E V SGAAERI G 90
Cdd:COG2610 7 LL LA I A L LI L L I I KFK L HPFLALLLA ALL VG LLA GM PLAKI V TS I MT G F GGTLG SIGL VIGLG AM LGK LL E D SGAAERI A 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 91 L T L - QRCRWLS A DVIM VL V G L I C GI TL F VE VG V V L L I PLAFS I A KKTNT S L L KLAIP L CTA L MAV H CV VPP H P AA L FV A N 169
Cdd:COG2610 87 D T I i KKFGEKR A PLAL VL A G F I L GI PV F FD VG F V I L A PLAFS L A RRAGI S K L LIGLA L AAG L STT H ML VPP T P GP L AA A G 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 170 K LGAD I G S VI VY GL L V GLM A s LI G G P L FL K F LG NR -- L P FKPVP A EFA D LKVREEST LPS L G AT L FTV LLPI G L M L VK T V 247
Cdd:COG2610 167 I LGAD L G A VI LL GL I V AIP A - LI V G Y L YA K W LG KK ap V P APEGL A GEE D EEEEDDEE LPS F G LA L LPI LLPI V L I L LG T I 245
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 248 A E L n MT K G S T L YTL L E FIG N PI T A MF I A V F VA YYI lg LR QHIGMSA L LTHTEN G FGSIAN ILLI I GAGGAF N A I L KS SG L 327
Cdd:COG2610 246 A D L - LP K D S A L VQV L A FIG D PI I A LL I G V L VA ILL -- LR RGLSREE L MKILNE G LKPAGL ILLI T GAGGAF G A V L AA SG I 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 328 A D TL A VI LS NMDMH P I LLA W L V A LI L HA A V GSATVAM MG A TA I V AP M L PLY p N VSPE IIAI AIG S G AI G CTI V T DS L FWL 407
Cdd:COG2610 323 G D AI A DA LS GLGLP P L LLA F L I A AL L RG A T GSATVAM IT A AG I L AP L L LAL - G VSPE LLVL AIG A G SG G LSH V N DS G FWL 401
410 420 430
....*....|....*....|....*....|....*...
gi 991929335 408 VK Q Y C G A T LN ET F K YY T TA T F I AS V IA L ACTFL LS FII 445
Cdd:COG2610 402 VK E Y F G L T VK ET L K TW T VM T T I IG V VG L VLVLI LS LLF 439
PRK14984
PRK14984 gluconate transporter;
13-445
6.88e-88
gluconate transporter;
Pssm-ID: 237880
Cd Length: 438
Bit Score: 274.75
E-value: 6.88e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 13 I SIV L IV L TIVK FK FHP F L AL L L ASFF VG A M M GM GPLDMVNA I ES G I GGTLG F LA AVI G L G TI LGKM MEVS G A A E RI GL T 92
Cdd:PRK14984 8 I GVA L LL L LMIR FK MNG F I AL V L VALA VG L M Q GM PLDKVIGS I KA G V GGTLG S LA LIM G F G AM LGKM LADC G G A Q RI AT T 87
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 93 L ------ QRCR W lsadv IM VL V G LIC G IT LF V EVG V VL LI PL A F S IA KKT N TS LL KLAI P LCT AL MAV H CVV PPHP AALF 166
Cdd:PRK14984 88 L iakfgk KHIQ W ----- AV VL T G FTV G FA LF Y EVG F VL ML PL V F T IA ASA N IP LL YVGV P MAA AL SVT H GFL PPHP GPTA 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 167 V A NKLG AD I G SVIV YG LLVGLMASLIG GP LFLK FL gn RLPF KP V P AEFADL K VRE E STL PS L G ATLF T V L L P IG LM LVKT 246
Cdd:PRK14984 163 I A TIFN AD M G KTLL YG TILAIPTVILA GP VYAR FL -- KGID KP I P EGLYSA K TFT E EEM PS F G VSVW T S L V P VI LM AMRA 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 247 V AE LNMT KG STLYTLL EF I G N P IT A MF IAV FV A YYIL GL RQHIG M SALLTHTENGFGS IA NI LLIIG A GGAF NAI L KS SG 326
Cdd:PRK14984 241 I AE MILP KG HAFLPVA EF L G D P VM A TL IAV LI A MFTF GL NRGRS M DQINDTLVSSIKI IA MM LLIIG G GGAF KQV L VD SG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 327 LADTL A VILSNMDMH P I L L AW LV A LI L HA A V GSATVA MMG A TA I V AP MLPL y PN VSPE IIA IA I GSG AIGCTI V T D SL FW 406
Cdd:PRK14984 321 VDKYI A SMMHETNIS P L L M AW SI A AV L RI A L GSATVA AIT A GG I A AP LIAT - TG VSPE LMV IA V GSG SVIFSH V N D PG FW 399
410 420 430
....*....|....*....|....*....|....*....
gi 991929335 407 L V K Q Y CGA T LN ET F K YYTTATF I A SV IA L ACTF LL SFI I 445
Cdd:PRK14984 400 L F K E Y FNL T IG ET I K SWSMLET I I SV CG L VGCL LL NMV I 438
PRK10034
PRK10034 gluconate transporter GntP;
11-445
1.45e-68
gluconate transporter GntP;
Pssm-ID: 182203
Cd Length: 447
Bit Score: 224.73
E-value: 1.45e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 11 LLIS I V L IVLTIV KFK FHPFL ALL L A SFF VG AMM GM GPLDMVNAIES G I G G TLG F LA AVIGL G TIL GK M M EV SGAA ER I G 90
Cdd:PRK10034 9 VVFG I G L MLVLNL KFK INSMV ALL V A ALS VG MLA GM DLMKLLHTMKA G F G N TLG E LA IIVVF G AVI GK L M VD SGAA HQ I A 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 91 L T - L Q R CRWLSADVIMVLV GLI C G ITL F V EV GVVL L I PL AFS IA KKTNTSL LKLAIP LCT A LMAV H CVV PP H P AALFVA N 169
Cdd:PRK10034 89 H T l L A R LGLRYVQLSVIII GLI F G LAM F Y EV AFIM L A PL VIV IA AEAKIPF LKLAIP AVA A ATTA H SLF PP Q P GPVALV N 168
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 170 KL GAD I G S V IV YG L LV GLMASLIG G PLFL KFLGN RL pf K P V P AEFADLKVREEST LPS L G ATLFTV L L P IGL M LVK T V A E 249
Cdd:PRK10034 169 AY GAD M G M V YI YG V LV TIPSVICA G LILP KFLGN LE -- R P T P SFLKADQPVDMNN LPS F G TSILVP L I P AII M IST T I A N 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 250 LNMT KG STLYTLLE FIG NPIT AMFIA VF VA YYIL G LRQHIG M SALLTHT E NGFG SIA NIL LIIGAGG AFNAILKSS G LA D 329
Cdd:PRK10034 247 IWLV KG TPAWEVVN FIG SSPI AMFIA MV VA FVLF G TARGHD M QWVMNAF E SAVK SIA MVI LIIGAGG VLKQTIIDT G IG D 326
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 330 T LAVIL S NMDMH P ILL AWL VALILHA A V G SAT V AM M G A TA I VA ----- P MLPLYPN V S P EIIAI A IGS G AIGC T IVT D SL 404
Cdd:PRK10034 327 T IGMLM S HGNIS P YIM AWL ITVLIRL A T G QGV V SA M T A AG I IS aaild P ATGQLVG V N P ALLVL A TAA G SNTL T HIN D AS 406
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 991929335 405 FWL V K Q Y CGATLNE T F K YYTTATFIA SV IA L ACTFLL S FII 445
Cdd:PRK10034 407 FWL F K G Y FDLSVKD T L K TWGLLELVN SV VG L IIVLII S MVA 447
PRK10472
PRK10472 low affinity gluconate transporter; Provisional
3-424
1.86e-68
low affinity gluconate transporter; Provisional
Pssm-ID: 182485
Cd Length: 445
Bit Score: 224.25
E-value: 1.86e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 3 S QIWV V S T LLI S IV L IVLTIV K FKF H P F L AL LLA S FFV G AMM GM GPLDMVNAI E S G I GGTLGFLA A V IG LG TIL GK MMEV 82
Cdd:PRK10472 2 S TLTL V L T AVG S VL L LLFLVM K ARM H A F V AL MVV S MGA G LFS GM PLDKIAATM E K G M GGTLGFLA V V VA LG AMF GK ILHE 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 83 S GA AER I GLT - L QRCRWLS A DVIMV L V GLIC GIT LF V EV GV VLLI PL AFS I A KK T N T S L L KL A IPL CTALM A VHCVVP P H 161
Cdd:PRK10472 82 T GA VDQ I AVK m L KSFGHSR A HYAIG L A GLIC ALP LF F EV AI VLLI SV AFS M A RH T G T N L V KL V IPL FAGVA A AAAFLL P G 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 162 PA ALFV A NKLG AD I G SV I VY GL LVGLMASL I G GPL FLK F LGNRLPF k PV P AEFADLKV r E E STL PS L G AT L FTV LLP IG L 241
Cdd:PRK10472 162 PA PMLL A SQMN AD F G WM I LI GL CAAIPGMI I A GPL WGN F ISRYVEL - HI P DDISEPHL - G E GKM PS F G FS L SLI LLP LV L 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 242 MLV KT V A ELNMTK GST L Y TLL EFIG N P I TA MFI A VF VA Y Y I L GL RQ HIGMSALLTHTENGFGSIAN ILL I IGAGG A F NAI 321
Cdd:PRK10472 240 VGL KT I A ARFVPE GST A Y EWF EFIG H P F TA ILV A CL VA I Y G L AM RQ GMPKDKVMEICGHALQPAGI ILL V IGAGG V F KQV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 322 L KS SG LADT L AVI L SN M DMHPILLAWLV A LILHAAV GSATVA MMG A TAI V A P MLPL -- Y PNVSPEIIA I A I GS G A I GCTI 399
Cdd:PRK10472 320 L VD SG VGPA L GEA L TG M GLPIAITCFVL A AAVRIIQ GSATVA CLT A VGL V M P VIEQ ln Y SGAQMAALS I C I AG G S I VVSH 399
410 420
....*....|....*....|....*
gi 991929335 400 V T D SL FWL VKQYC GAT LNE T F K YY T 424
Cdd:PRK10472 400 V N D AG FWL FGKFT GAT EAQ T L K TW T 424
PRK09821
PRK09821 putative transporter; Provisional
12-445
2.75e-67
putative transporter; Provisional
Pssm-ID: 182094
Cd Length: 454
Bit Score: 221.45
E-value: 2.75e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 12 L ISIV L IV L TIV K F K FH PF L ALLL A S FF V GAMM G MGPLDMVNAIES G I GG T LG FLAAV IGLG TI LG K M M E V SG A AE RIGL 91
Cdd:PRK09821 11 L AGVI L LL L LVI K A K VQ PF V ALLL V S LL V ALAA G IPAGEVGKVMIA G M GG V LG SVTII IGLG AM LG R M I E H SG G AE SLAN 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 92 TLQ R CRWLSADVIMV - L VGL I C GI TL F VE VG VVL L I P LAFSI AK KTNT S L LK LAI P LCTALMA VH CVV PPHP AALFV A NK 170
Cdd:PRK09821 91 YFT R KLGDKRTIAAL t L AAF I L GI PV F FD VG FII L A P IIYGF AK VAKV S P LK FGL P VAGIMLT VH VAL PPHP GPVAA A GL 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 171 L G ADIG SVIVY G LLVGLMASLI G gp L F LKFLG NR LPFKPVPA ----- EF A DLKVREEST L ------ P SLGATLFTVLL PI 239
Cdd:PRK09821 171 L H ADIG WLTII G IAISIPVGIV G -- Y F AAKII NR RQYALSVE vleqm QL A PASEEGATK L sdkinp P GAALITSLIVI PI 248
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 240 GLMLVK TV AELNMTKGST L YTL L EF IG N P IT A MF IA VFV A YYI L G LR QHIGMSALLTHTENGFGSI A NIL L II GAGG A F N 319
Cdd:PRK09821 249 AIIMLG TV SATLLPPSHP L LGT L QL IG S P MV A LL IA LVL A FWL L A LR RGWSLQHTSDVMGSALPTA A VVI L VT GAGG V F G 328
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 320 AI L KS SG LADT LA VI L SNMDMHP I LL A WLVA L I L H A AV GSATVA MMGATAIVAPMLPLYPNVSPEIIAI A IGS G AI G CTI 399
Cdd:PRK09821 329 KV L VE SG VGKA LA NM L QMIHLPL I PA A FIIS L A L R A SQ GSATVA ILTTSGLLSEAVMGLNPIQCVLVTL A ACF G GL G LSH 408
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 991929335 400 V T DS L FW L V KQ Y C G ATLNETF K YY T TA T F I ASVIALAC T FLLSFI I 445
Cdd:PRK09821 409 V N DS G FW I V TK Y L G LSVADGL K TW T VL T T I LGLTGFLI T WCVWAV I 454
CitMHS
pfam03600 Citrate transporter;
31-318
7.33e-04
Citrate transporter;
Pssm-ID: 460985 [Multi-domain]
Cd Length: 342
Bit Score: 41.53
E-value: 7.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 31 L ALLLASFFVGAMMGMGPLDMVNAIE SGI GGTLGF L aav IGLGT I L G KMM E VS G AAE R IG L T L Q R C ---- RWLSADVI M V 106
Cdd:pfam03600 9 L PRDVVALLGAVLLVLLGVLTPEEAL SGI DSPTIL L --- LLGMM I I G AIL E RT G LFD R LA L K L L R L aggk PRRLLVAL M L 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 107 LVG L ICGITLFV e VG V VLL IP LAFSI A KKTNTSLLK L A I P L CT A ---- LM A VHCVV PP HPAALFVANKLGA D I G SVIVYG 182
Cdd:pfam03600 86 ATA L LSAFLSND - GT V LIM IP IVLAL A RRLGLPPSP L L I A L AF A anig GT A TPIGD PP NIIIASALGLSFG D F G FFMFPP 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 991929335 183 LL V G L MASLIGGP L FL -- K F L GN R LPFKPVPA E FADLKVREEST L PSLGAT L FT V L --- L PIGLMLVKTVAE L NM T KGST 257
Cdd:pfam03600 165 VG V A L LLVGLLPL L LI fr K L L PV R KEEEAELE E LRKRAIKDKLL L AISALV L AL V I lgf L LLSVLALAGALL L LL T GVLD 244
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 991929335 258 LYTL L EFIGNPITAM F IAV F VAYYI L glr QHI G MSAL L THTEN G FGSIANI L LI I GAGG A F 318
Cdd:pfam03600 245 PEEA L KAVDWSTLLF F AGL F ILVGA L --- EKT G LADA L ADALG G LSGLLVA L AL I LWLS A L 302
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
