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Conserved domains on  [gi|1039019855|gb|ANM68975|]
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Fe superoxide dismutase 2 [Arabidopsis thaliana]

Protein Classification

PLN02685 family protein( domain architecture ID 11477059)

PLN02685 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02685 PLN02685
iron superoxide dismutase
 5-296 0e+00

iron superoxide dismutase


:

Pssm-ID: 215369  Cd Length: 299  Bit Score: 560.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855   5 AVTATPSSLLYSPLLLPSQGPNRRMQWKrnGKRRLGTKVAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKT 84
Cdd:PLN02685    1 AVTATPASLSLSPALLPSQGPSRRMQWK--GKRRTCTRKAVSGVITAKFELKPPPYPLDALEPHMSRETLEYHWGKHHRA 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  85 YVENLNKQILGTDLDALSLEEVVLLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLE 164
Cdd:PLN02685   79 YVDNLNKQIVGTELDGMSLEDVVLITYNKGDMLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLQLIERDFGSFERFVE 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 165 RFKSAAASNFGSGWTWLAYKANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPLVWDYS---------HAYYLDFENRRAE 235
Cdd:PLN02685  159 EFKSAAATQFGSGWAWLAYKANRLDVGNAVNPCPSEEDKKLVVVKSPNAVNPLVWDYSplltidvweHAYYLDFQNRRPD 238

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039019855 236 YINTFMEKLVSWETVSTRLESAIARAVQREQEGTETEDEENPDDEVPEVYLDSDIDVSEVD 296
Cdd:PLN02685  239 YISTFMEKLVSWEAVSARLESAKARAAQREQEETRTEDEEEPDSEAVEMYLDSDIDVSEVD 299
 
Name Accession Description Interval E-value
PLN02685 PLN02685
iron superoxide dismutase
 5-296 0e+00

iron superoxide dismutase


Pssm-ID: 215369  Cd Length: 299  Bit Score: 560.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855   5 AVTATPSSLLYSPLLLPSQGPNRRMQWKrnGKRRLGTKVAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKT 84
Cdd:PLN02685    1 AVTATPASLSLSPALLPSQGPSRRMQWK--GKRRTCTRKAVSGVITAKFELKPPPYPLDALEPHMSRETLEYHWGKHHRA 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  85 YVENLNKQILGTDLDALSLEEVVLLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLE 164
Cdd:PLN02685   79 YVDNLNKQIVGTELDGMSLEDVVLITYNKGDMLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLQLIERDFGSFERFVE 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 165 RFKSAAASNFGSGWTWLAYKANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPLVWDYS---------HAYYLDFENRRAE 235
Cdd:PLN02685  159 EFKSAAATQFGSGWAWLAYKANRLDVGNAVNPCPSEEDKKLVVVKSPNAVNPLVWDYSplltidvweHAYYLDFQNRRPD 238

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039019855 236 YINTFMEKLVSWETVSTRLESAIARAVQREQEGTETEDEENPDDEVPEVYLDSDIDVSEVD 296
Cdd:PLN02685  239 YISTFMEKLVSWEAVSARLESAKARAAQREQEETRTEDEEEPDSEAVEMYLDSDIDVSEVD 299
SodA COG0605
Superoxide dismutase [Inorganic ion transport and metabolism];
54-253 3.50e-87

Superoxide dismutase [Inorganic ion transport and metabolism];


Pssm-ID: 440370 [Multi-domain]  Cd Length: 192  Bit Score: 258.52  E-value: 3.50e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  54 ELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGT-DLDALSLEEVVLLSYNKGNMlPAFNNAAQAWNHEFF 132
Cdd:COG0605     1 ELPPLPYAYDALEPHISAETMELHHDKHHQAYVNNLNAALEGLaELEDKSLEEIIKKLSEELKR-ALRNNAGGHWNHTLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 133 WESIQPGGGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKAnrldvanavnplpkeeDKKLVIVKTPN 212
Cdd:COG0605    80 WENLSPNGGGEPTGELAAAIEADFGSFDAFKEEFKAAAAGRFGSGWAWLVVDK----------------DGKLEIVSTPN 143

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1039019855 213 AVNPLVWDYS---------HAYYLDFENRRAEYINTFMeKLVSWETVSTR 253
Cdd:COG0605   144 QDNPLMAGGTpllgldvweHAYYLDYQNRRPDYVDAFW-NVVNWDFVEKR 192
Sod_Fe_C pfam02777
Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyze ...
 144-253 1.08e-38

Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. C-terminal domain is a mixed alpha/beta fold.


Pssm-ID: 460691  Cd Length: 102  Bit Score: 131.78  E-value: 1.08e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 144 PTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKAnrldvanavnplpkeeDKKLVIVKTPNAVNPLVWD--- 220
Cdd:pfam02777   1 PTGALAEAIEKDFGSFDAFKEEFNAAAAGVFGSGWAWLVYDP----------------DGKLEIVTTPNQDNPLTDGltp 64

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1039019855 221 ------YSHAYYLDFENRRAEYINTFMeKLVSWETVSTR 253
Cdd:pfam02777  65 llgldvWEHAYYLDYQNRRADYVKAFW-NVVNWDEVEKR 102
 
Name Accession Description Interval E-value
PLN02685 PLN02685
iron superoxide dismutase
 5-296 0e+00

iron superoxide dismutase


Pssm-ID: 215369  Cd Length: 299  Bit Score: 560.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855   5 AVTATPSSLLYSPLLLPSQGPNRRMQWKrnGKRRLGTKVAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKT 84
Cdd:PLN02685    1 AVTATPASLSLSPALLPSQGPSRRMQWK--GKRRTCTRKAVSGVITAKFELKPPPYPLDALEPHMSRETLEYHWGKHHRA 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  85 YVENLNKQILGTDLDALSLEEVVLLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLE 164
Cdd:PLN02685   79 YVDNLNKQIVGTELDGMSLEDVVLITYNKGDMLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLQLIERDFGSFERFVE 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 165 RFKSAAASNFGSGWTWLAYKANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPLVWDYS---------HAYYLDFENRRAE 235
Cdd:PLN02685  159 EFKSAAATQFGSGWAWLAYKANRLDVGNAVNPCPSEEDKKLVVVKSPNAVNPLVWDYSplltidvweHAYYLDFQNRRPD 238

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039019855 236 YINTFMEKLVSWETVSTRLESAIARAVQREQEGTETEDEENPDDEVPEVYLDSDIDVSEVD 296
Cdd:PLN02685  239 YISTFMEKLVSWEAVSARLESAKARAAQREQEETRTEDEEEPDSEAVEMYLDSDIDVSEVD 299
PLN02184 PLN02184
superoxide dismutase [Fe]
 43-259 7.22e-95

superoxide dismutase [Fe]


Pssm-ID: 177838  Cd Length: 212  Bit Score: 278.94  E-value: 7.22e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  43 VAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTDLDALSLEEVVLLSYNKGNMLPAFNN 122
Cdd:PLN02184    1 MAASSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEHIIHSTYNNGDLLPAFNN 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 123 AAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKanrldvanavnplpkeeD 202
Cdd:PLN02184   81 AAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFNAAAATQFGAGWAWLAYS-----------------N 143

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039019855 203 KKLVIVKTPNAVNPLVWD---------YSHAYYLDFENRRAEYINTFMEKLVSWETVSTRLESAIA 259
Cdd:PLN02184  144 EKLKVVKTPNAVNPLVLGsfplltidvWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAAKA 209
PLN02622 PLN02622
iron superoxide dismutase
 26-259 1.44e-87

iron superoxide dismutase


Pssm-ID: 166263 [Multi-domain]  Cd Length: 261  Bit Score: 262.26  E-value: 1.44e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  26 NRRMQWKRNGKRRLGTKVAVSGvitagfeLKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTD-LDALSLE 104
Cdd:PLN02622   28 NLRNKQRRRSLQRASKVVAYYG-------LKTPPYPLDALEPYMSRRTLEVHWGEHHRGYVEGLNKQLAKDDiLYGYTMD 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 105 EVVLLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYk 184
Cdd:PLN02622  101 ELVKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGDMPELGVLEQIEKDFGSFTNFREKFTEAALTLFGSGWVWLVL- 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 185 anrldvanavnplpKEEDKKLVIVKTPNAVNPLVWD---------YSHAYYLDFENRRAEYINTFMEKLVSWETVSTRLE 255
Cdd:PLN02622  180 --------------KREERRLEVVKTSNAINPLVWDdipiicldvWEHAYYLDYKNDRGKYVNAFMNHLVSWNAAMARMA 245


                  ....
gi 1039019855 256 SAIA 259
Cdd:PLN02622  246 RAEA 249
SodA COG0605
Superoxide dismutase [Inorganic ion transport and metabolism];
54-253 3.50e-87

Superoxide dismutase [Inorganic ion transport and metabolism];


Pssm-ID: 440370 [Multi-domain]  Cd Length: 192  Bit Score: 258.52  E-value: 3.50e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  54 ELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGT-DLDALSLEEVVLLSYNKGNMlPAFNNAAQAWNHEFF 132
Cdd:COG0605     1 ELPPLPYAYDALEPHISAETMELHHDKHHQAYVNNLNAALEGLaELEDKSLEEIIKKLSEELKR-ALRNNAGGHWNHTLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 133 WESIQPGGGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKAnrldvanavnplpkeeDKKLVIVKTPN 212
Cdd:COG0605    80 WENLSPNGGGEPTGELAAAIEADFGSFDAFKEEFKAAAAGRFGSGWAWLVVDK----------------DGKLEIVSTPN 143

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1039019855 213 AVNPLVWDYS---------HAYYLDFENRRAEYINTFMeKLVSWETVSTR 253
Cdd:COG0605   144 QDNPLMAGGTpllgldvweHAYYLDYQNRRPDYVDAFW-NVVNWDFVEKR 192
PRK10543 PRK10543
superoxide dismutase [Fe];
53-256 6.18e-62

superoxide dismutase [Fe];


Pssm-ID: 182534  Cd Length: 193  Bit Score: 194.40  E-value: 6.18e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  53 FELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTDLDALSLEEVVLLSynKGNMlpaFNNAAQAWNHEFF 132
Cdd:PRK10543    3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIVRSS--EGGV---FNNAAQVWNHTFY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 133 WESIQPGGGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAykanrldvanavnplpKEEDKKLVIVKTPN 212
Cdd:PRK10543   78 WNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV----------------KNADGKLAIVSTSN 141

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1039019855 213 AVNPL-----------VWDysHAYYLDFENRRAEYINTFMeKLVSWETVSTRLES 256
Cdd:PRK10543  142 AGTPLttdatplltvdVWE--HAYYIDYRNARPGYLEHFW-ALVNWEFVAKNLAA 193
PTZ00078 PTZ00078
Superoxide dismutase [Fe]; Provisional
 59-257 6.08e-59

Superoxide dismutase [Fe]; Provisional


Pssm-ID: 185432 [Multi-domain]  Cd Length: 193  Bit Score: 186.92  E-value: 6.08e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  59 PYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTDLDALSLEEVVllsynKGNMLPAFNNAAQAWNHEFFWESIQP 138
Cdd:PTZ00078    4 PYGLKELSPHLSEETLKFHYSKHHAGYVNKLNGLIKGTPLENKTLEELI-----KEYSGAVFNNAAQIWNHNFYWLSMGP 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 139 GGGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKanrldvanavnplpkeEDKKLVIVKTPNAVNPL- 217
Cdd:PTZ00078   79 NGGGEPTGEIKEKIDEKFGSFDNFKNEFSNVLSGHFGSGWGWLVLK----------------NDGKLEIVQTHDAGNPIk 142

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1039019855 218 -----------VWDysHAYYLDFENRRAEYINTFMEKlVSWETVSTRLESA 257
Cdd:PTZ00078  143 dntgkplltcdIWE--HAYYIDYRNDRASYVNSWWNK-VNWDFANKNLKKL 190
PRK10925 PRK10925
superoxide dismutase [Mn];
53-258 4.15e-40

superoxide dismutase [Mn];


Pssm-ID: 182843  Cd Length: 206  Bit Score: 138.90  E-value: 4.15e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  53 FELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILG-TDLDALSLEEVVllsyNKGNMLPA------FNNAAQ 125
Cdd:PRK10925    3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESlPEFANLPVEELI----TKLDQLPAdkktvlRNNAGG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 126 AWNHEFFWESIQPGGggKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKanrldvanavnplpkeeDKKL 205
Cdd:PRK10925   79 HANHSLFWKGLKKGT--TLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLK-----------------GDKL 139

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 206 VIVKTPNAVNPL-----------------VWDysHAYYLDFENRRAEYINTFMEkLVSWETVSTRLESAI 258
Cdd:PRK10925  140 AVVSTANQDSPLmgeaisgasgfpilgldVWE--HAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
Sod_Fe_C pfam02777
Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyze ...
 144-253 1.08e-38

Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. C-terminal domain is a mixed alpha/beta fold.


Pssm-ID: 460691  Cd Length: 102  Bit Score: 131.78  E-value: 1.08e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 144 PTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKAnrldvanavnplpkeeDKKLVIVKTPNAVNPLVWD--- 220
Cdd:pfam02777   1 PTGALAEAIEKDFGSFDAFKEEFNAAAAGVFGSGWAWLVYDP----------------DGKLEIVTTPNQDNPLTDGltp 64

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1039019855 221 ------YSHAYYLDFENRRAEYINTFMeKLVSWETVSTR 253
Cdd:pfam02777  65 llgldvWEHAYYLDYQNRRADYVKAFW-NVVNWDEVEKR 102
Sod_Fe_N pfam00081
Iron/manganese superoxide dismutases, alpha-hairpin domain; superoxide dismutases (SODs) ...
 53-136 3.28e-27

Iron/manganese superoxide dismutases, alpha-hairpin domain; superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. N-terminal domain is a long alpha antiparallel hairpin. A small fragment of YTRE_LEPBI matches well - sequencing error?


Pssm-ID: 425457  Cd Length: 82  Bit Score: 101.23  E-value: 3.28e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  53 FELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTDLDALSLEEVVLlsynKGNMLPAFNNAAQAWNHEFF 132
Cdd:pfam00081   2 YELPDLPYAYDALEPHISKETMEIHHTKHHQTYVNNLNAALEGLEEARKPLEELII----KALLGGLFNNGGGHWNHSLF 77


                  ....
gi 1039019855 133 WESI 136
Cdd:pfam00081  78 WKNL 81
PLN02471 PLN02471
superoxide dismutase [Mn]
 35-251 1.64e-26

superoxide dismutase [Mn]


Pssm-ID: 215262  Cd Length: 231  Bit Score: 103.83  E-value: 1.64e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855  35 GKRRLGTKVAVSGVITagFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQIlgTDLDAlSLEEVVLLSYNKG 114
Cdd:PLN02471   15 LKETSSRLLSFRGLQT--FTLPDLPYDYGALEPAISGEIMQLHHQKHHQTYVTNYNKAL--EQLDQ-AVEKGDASAVVKL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039019855 115 NMLPAFNNAAQAwNHEFFWESIQP---GGGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAY--KANRLD 189
Cdd:PLN02471   90 QSAIKFNGGGHV-NHSIFWKNLAPvseGGGEPPHGSLGWAIDEHFGSLEALVKKMSAEGAAVQGSGWVWLGLdkELKKLV 168

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039019855 190 VANAVNPLPkeedkklVIVKTPNAVnPL----VWDysHAYYLDFENRRAEYINTFMeKLVSWETVS 251
Cdd:PLN02471  169 VETTANQDP-------LVTKGPSLV-PLlgidVWE--HAYYLQYKNVRPDYLKNIW-KVMNWKYAS 223
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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