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Conserved domains on  [gi|1089747878|gb|AOY34341|]
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myristylated tegument protein [Human alphaherpesvirus 1]

Protein Classification

PHA03356 family protein( domain architecture ID 10010534)

PHA03356 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03356 PHA03356
tegument protein UL11; Provisional
 1-93 6.18e-54

tegument protein UL11; Provisional


:

Pssm-ID: 177594  Cd Length: 93  Bit Score: 162.74  E-value: 6.18e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089747878  1 MGLSFSGARPCCCRNNVLITDDGEVVSLTAHDFDVVDIESEEEGNFYVPPDMRVVTRAPGRQRLRSSDPPSRHTHRRTPG 80
Cdd:PHA03356   1 MGLAGSRARPCCCRRNVLVTDRGETVSLTAHEFDAVDLESDAGGNFYISPELRVVTQPPGRQPPRPSGPPSRHTRHWSPS 80

                         90
                 ....*....|...
gi 1089747878 81 GACPATQFPPPMS 93
Cdd:PHA03356  81 GARPAPTFPPPMS 93
 
Name Accession Description Interval E-value
PHA03356 PHA03356
tegument protein UL11; Provisional
 1-93 6.18e-54

tegument protein UL11; Provisional


Pssm-ID: 177594  Cd Length: 93  Bit Score: 162.74  E-value: 6.18e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089747878  1 MGLSFSGARPCCCRNNVLITDDGEVVSLTAHDFDVVDIESEEEGNFYVPPDMRVVTRAPGRQRLRSSDPPSRHTHRRTPG 80
Cdd:PHA03356   1 MGLAGSRARPCCCRRNVLVTDRGETVSLTAHEFDAVDLESDAGGNFYISPELRVVTQPPGRQPPRPSGPPSRHTRHWSPS 80

                         90
                 ....*....|...
gi 1089747878 81 GACPATQFPPPMS 93
Cdd:PHA03356  81 GARPAPTFPPPMS 93
UL11 pfam11094
Membrane-associated tegument protein; The UL11 gene product of herpes simplex virus is a ...
 1-39 1.66e-19

Membrane-associated tegument protein; The UL11 gene product of herpes simplex virus is a membrane-associated tegument protein that is incorporated into the HSV virion and functions in viral envelopment. UL11 is acylated which is crucial for lipid raft association.


Pssm-ID: 288002  Cd Length: 39  Bit Score: 74.15  E-value: 1.66e-19
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 1089747878  1 MGLSFSGARPCCCRNNVLITDDGEVVSLTAHDFDVVDIE 39
Cdd:pfam11094  1 MGQSSSSGRGCCCRKNELTTCNGEVVALDDEFFDDVDFD 39
 
Name Accession Description Interval E-value
PHA03356 PHA03356
tegument protein UL11; Provisional
 1-93 6.18e-54

tegument protein UL11; Provisional


Pssm-ID: 177594  Cd Length: 93  Bit Score: 162.74  E-value: 6.18e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089747878  1 MGLSFSGARPCCCRNNVLITDDGEVVSLTAHDFDVVDIESEEEGNFYVPPDMRVVTRAPGRQRLRSSDPPSRHTHRRTPG 80
Cdd:PHA03356   1 MGLAGSRARPCCCRRNVLVTDRGETVSLTAHEFDAVDLESDAGGNFYISPELRVVTQPPGRQPPRPSGPPSRHTRHWSPS 80

                         90
                 ....*....|...
gi 1089747878 81 GACPATQFPPPMS 93
Cdd:PHA03356  81 GARPAPTFPPPMS 93
UL11 pfam11094
Membrane-associated tegument protein; The UL11 gene product of herpes simplex virus is a ...
 1-39 1.66e-19

Membrane-associated tegument protein; The UL11 gene product of herpes simplex virus is a membrane-associated tegument protein that is incorporated into the HSV virion and functions in viral envelopment. UL11 is acylated which is crucial for lipid raft association.


Pssm-ID: 288002  Cd Length: 39  Bit Score: 74.15  E-value: 1.66e-19
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 1089747878  1 MGLSFSGARPCCCRNNVLITDDGEVVSLTAHDFDVVDIE 39
Cdd:pfam11094  1 MGQSSSSGRGCCCRKNELTTCNGEVVALDDEFFDDVDFD 39
PHA03354 PHA03354
Alkaline exonuclease; Provisional
 12-68 9.92e-04

Alkaline exonuclease; Provisional


Pssm-ID: 177593  Cd Length: 81  Bit Score: 34.86  E-value: 9.92e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 1089747878 12 CCRNNVLITDDGEVVSLTAHDFDVVDIESEEEGNFYVPPDMRVVTRAPGR-QRLRSSD 68
Cdd:PHA03354  15 CCKRNTLLTKSGQVIELDDENYDTVDLDELRYSDPLEEAKIVLLDRPIGRgKRINKNE 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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