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Conserved domains on  [gi|1189039216|gb|ARN85437|]
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phosphomannomutase [Candidatus Nucleicultrix amoebiphila FS5]

Protein Classification

phosphomannomutase/phosphoglucomutase( domain architecture ID 10122997)

phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars via a bisphosphorylated sugar intermediate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PMM_PGM cd03089
The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the ...
7-450 0e+00

The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


:

Pssm-ID: 100091  Cd Length: 443  Bit Score: 613.37  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   7 IFREYDIRGVVGTEITHRFAYELGRAYGTMAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYF 86
Cdd:cd03089     1 IFRAYDIRGIAGEELTEEIAYAIGRAFGSWLLEKGAKKVVVGRDGRLSSPELAAALIEGLLAAGCDVIDIGLVPTPVLYF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  87 AQRALNADGAIMITGSHNPAHMNGFKMMLKGVSFFGDNIQKLYKTLTQSDFF--ENAGSIEEVAFEGAYVEYLLEDFKth 164
Cdd:cd03089    81 ATFHLDADGGVMITASHNPPEYNGFKIVIGGGPLSGEDIQALRERAEKGDFAaaTGRGSVEKVDILPDYIDRLLSDIK-- 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 165 yETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTVPENLVELQQTVLSRKADLGIAFDGDGD 244
Cdd:cd03089   159 -LGKRPLKVVVDAGNGAAGPIAPQLLEALGCEVIPLFCEPDGTFPNHHPDPTDPENLEDLIAAVKENGADLGIAFDGDGD 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 245 RLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSPLAGEM 324
Cdd:cd03089   238 RLGVVDEKGEIIWGDRLLALFARDILKRNPGATIVYDVKCSRNLYDFIEEAGGKPIMWKTGHSFIKAKMKETGALLAGEM 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 325 SGHVFFGDRNFGFDDALYAALRLCGIVGMKEKPLSAWRLSLPKTYATPELHIQAQDVDKFKVIQSIRVELEKNNIDFIDV 404
Cdd:cd03089   318 SGHIFFKDRWYGFDDGIYAALRLLELLSKSGKTLSELLADLPKYFSTPEIRIPVTEEDKFAVIERLKEHFEFPGAEIIDI 397
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 1189039216 405 DGVRVVKKNGWWLLRASNTQEILVGRVEALSEKVLGELKDDLESHL 450
Cdd:cd03089   398 DGVRVDFEDGWGLVRASNTEPVLVLRFEADTEEGLEEIKAELRKLL 443
 
Name Accession Description Interval E-value
PMM_PGM cd03089
The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the ...
7-450 0e+00

The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100091  Cd Length: 443  Bit Score: 613.37  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   7 IFREYDIRGVVGTEITHRFAYELGRAYGTMAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYF 86
Cdd:cd03089     1 IFRAYDIRGIAGEELTEEIAYAIGRAFGSWLLEKGAKKVVVGRDGRLSSPELAAALIEGLLAAGCDVIDIGLVPTPVLYF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  87 AQRALNADGAIMITGSHNPAHMNGFKMMLKGVSFFGDNIQKLYKTLTQSDFF--ENAGSIEEVAFEGAYVEYLLEDFKth 164
Cdd:cd03089    81 ATFHLDADGGVMITASHNPPEYNGFKIVIGGGPLSGEDIQALRERAEKGDFAaaTGRGSVEKVDILPDYIDRLLSDIK-- 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 165 yETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTVPENLVELQQTVLSRKADLGIAFDGDGD 244
Cdd:cd03089   159 -LGKRPLKVVVDAGNGAAGPIAPQLLEALGCEVIPLFCEPDGTFPNHHPDPTDPENLEDLIAAVKENGADLGIAFDGDGD 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 245 RLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSPLAGEM 324
Cdd:cd03089   238 RLGVVDEKGEIIWGDRLLALFARDILKRNPGATIVYDVKCSRNLYDFIEEAGGKPIMWKTGHSFIKAKMKETGALLAGEM 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 325 SGHVFFGDRNFGFDDALYAALRLCGIVGMKEKPLSAWRLSLPKTYATPELHIQAQDVDKFKVIQSIRVELEKNNIDFIDV 404
Cdd:cd03089   318 SGHIFFKDRWYGFDDGIYAALRLLELLSKSGKTLSELLADLPKYFSTPEIRIPVTEEDKFAVIERLKEHFEFPGAEIIDI 397
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 1189039216 405 DGVRVVKKNGWWLLRASNTQEILVGRVEALSEKVLGELKDDLESHL 450
Cdd:cd03089   398 DGVRVDFEDGWGLVRASNTEPVLVLRFEADTEEGLEEIKAELRKLL 443
ManB COG1109
Phosphomannomutase [Carbohydrate transport and metabolism];
1-453 3.83e-160

Phosphomannomutase [Carbohydrate transport and metabolism];


Pssm-ID: 440726 [Multi-domain]  Cd Length: 456  Bit Score: 460.44  E-value: 3.83e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   1 MSYPqKIFREYDIRGVVGTEITHRFAYELGRAYGTMAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGP 80
Cdd:COG1109     1 MTYK-KLFGTDGIRGIVGEELTPEFVLKLGRAFGTYLKEKGGPKVVVGRDTRLSSPMLARALAAGLASAGIDVYDLGLVP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  81 TPMVYFAQRALNADGAIMITGSHNPAHMNGFKMML-KGVSFFGDNIQKLYKTLTQSDFF----ENAGSIEEVA-FEGAYV 154
Cdd:COG1109    80 TPALAFAVRHLGADGGIMITASHNPPEYNGIKFFDaDGGKLSPEEEKEIEALIEKEDFRraeaEEIGKVTRIEdVLEAYI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 155 EYLLEDFKTHyETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTvPENLVELQQTVLSRKAD 234
Cdd:COG1109   160 EALKSLVDEA-LRLRGLKVVVDCGNGAAGGVAPRLLRELGAEVIVLNAEPDGNFPNHNPNPE-PENLEDLIEAVKETGAD 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 235 LGIAFDGDGDRLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMK 314
Cdd:COG1109   238 LGIAFDGDADRLGVVDEKGRFLDGDQLLALLARYLLEKGPGGTVVVTVMSSLALEDIAEKHGGEVVRTKVGFKYIKEKMR 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 315 ELSSPLAGEMSGHVFFGDrNFGFDDALYAALRLCGIVGMKEKPLSAWRLSLPKtYATPELHIQAQDVDKF-KVIQSIRVE 393
Cdd:COG1109   318 ETGAVLGGEESGGIIFPD-FVPTDDGILAALLLLELLAKQGKSLSELLAELPR-YPQPEINVRVPDEEKIgAVMEKLREA 395
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1189039216 394 LEKnNIDFIDVDGVRVVKKNG-WWLLRASNTQEILVGRVEALSEKVLGELKDDLESHLKNY 453
Cdd:COG1109   396 VED-KEELDTIDGVKVDLEDGgWVLVRPSGTEPLLRVYAEAKDEEEAEELLAELAELVEEA 455
Arch_GlmM TIGR03990
phosphoglucosamine mutase; The MMP1680 protein from Methanococcus maripaludis has been ...
6-448 1.50e-113

phosphoglucosamine mutase; The MMP1680 protein from Methanococcus maripaludis has been characterized as the archaeal protein responsible for the second step of UDP-GlcNAc biosynthesis. This GlmM protein catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate. The first-characterized bacterial GlmM protein is modeled by TIGR01455. These two families are members of the larger phosphoglucomutase/phosphomannomutase family (characterized by three domains: pfam02878, pfam02879 and pfam02880), but are not nearest neighbors to each other. This model also includes a number of sequences from non-archaea in the Bacteroides, Chlorobi, Chloroflexi, Planctomycetes and Spirochaetes lineages. Evidence supporting their inclusion in this equivalog as having the same activity comes from genomic context and phylogenetic profiling. A large number of these organisms are known to produce exo-polysaccharide and yet only appeared to contain the GlmS enzyme of the GlmSMU pathway for UDP-GlcNAc biosynthesis (GenProp0750). In some organisms including Leptospira, this archaeal GlmM is found adjacent to the GlmS as well as a putative GlmU non-orthologous homolog. Phylogenetic profiling of the GlmS-only pattern using PPP identifies members of this archaeal GlmM family as the highest-scoring result. [Central intermediary metabolism, Amino sugars]


Pssm-ID: 274906  Cd Length: 443  Bit Score: 341.03  E-value: 1.50e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   6 KIFREYDIRGVVGTEITHRFAYELGRAYGTMAeaqGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVY 85
Cdd:TIGR03990   2 LLFGTSGIRGIVGEELTPELALKVGKAFGTYL---RGGKVVVGRDTRTSGPMLENAVIAGLLSTGCDVVDLGIAPTPTLQ 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  86 FAQRALNADGAIMITGSHNPAHMNGFKMMLK-GVSFFGDNIQKLYKTLTQSDFF----ENAGSIEEVA-FEGAYVEYLLE 159
Cdd:TIGR03990  79 YAVRELGADGGIMITASHNPPEYNGIKLLNSdGTELSREQEEEIEEIAESGDFEradwDEIGTVTSDEdAIDDYIEAILD 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 160 DFKTHYETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTvPENLVELQQTVLSRKADLGIAF 239
Cdd:TIGR03990 159 KVDVEAIRKKGFKVVVDCGNGAGSLTTPYLLRELGCKVITLNCQPDGTFPGRNPEPT-PENLKDLSALVKATGADLGIAH 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 240 DGDGDRLGVVDETAQIIWGDQLLILFAEEVLKtHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSP 319
Cdd:TIGR03990 238 DGDADRLVFIDEKGRFIGGDYTLALFAKYLLE-HGGGKVVTNVSSSRAVEDVAERHGGEVIRTKVGEVNVAEKMKEEGAV 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 320 LAGEMSGHVFFGDRNFGfDDALYAALRLCGIVGMKEKPLSAWRLSLPKtYATPELHIQAQDVDKFKVIQSIRVELEKNNI 399
Cdd:TIGR03990 317 FGGEGNGGWIFPDHHYC-RDGLMAAALFLELLAEEGKPLSELLAELPK-YPMSKEKVELPDEDKEEVMEAVEEEFADAEI 394
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 1189039216 400 DFIdvDGVRVVKKNGWWLLRASNTQEILVGRVEALSEKVLGELKDDLES 448
Cdd:TIGR03990 395 DTI--DGVRIDFEDGWVLVRPSGTEPIVRIYAEAKTEERAEELLEEGRS 441
manB PRK09542
phosphomannomutase/phosphoglucomutase; Reviewed
8-446 1.19e-81

phosphomannomutase/phosphoglucomutase; Reviewed


Pssm-ID: 236557  Cd Length: 445  Bit Score: 259.14  E-value: 1.19e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   8 FREYDIRGVVGTEITHRFAYELGRAYGTMAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFA 87
Cdd:PRK09542    1 IKAYDVRGVVGEQIDEDLVRDVGAAFARLMRAEGATTVVIGHDMRDSSPELAAAFAEGVTAQGLDVVRIGLASTDQLYFA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  88 QRALNADGAiMITGSHNPAHMNGFKMMLKGVSFFG-----DNIQKLyktLTQS--DFFENAGSIEEVAFEGAYVEYLLED 160
Cdd:PRK09542   81 SGLLDCPGA-MFTASHNPAAYNGIKLCRAGAKPVGqdtglAAIRDD---LIAGvpAYDGPPGTVTERDVLADYAAFLRSL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 161 FKThyETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTVPENLVELQQTVLSRKADLGIAFD 240
Cdd:PRK09542  157 VDL--SGIRPLKVAVDAGNGMGGHTVPAVLGGLPITLLPLYFELDGTFPNHEANPLDPANLVDLQAFVRETGADIGLAFD 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 241 GDGDRLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSPL 320
Cdd:PRK09542  235 GDADRCFVVDERGQPVSPSAVTALVAARELAREPGATIIHNLITSRAVPELVAERGGTPVRTRVGHSFIKALMAETGAIF 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 321 AGEMSGHVFFGDRnFGFDDALYAALRLCGIVGMKEKPLSAWRLSLPKTYATPELHIQAQDVDkfKVIQSIRVELEKNNID 400
Cdd:PRK09542  315 GGEHSAHYYFRDF-WGADSGMLAALHVLAALGEQDRPLSELMADYQRYAASGEINSTVADAP--ARMEAVLKAFADRIVS 391
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1189039216 401 FIDVDGVRVVKKNGWWL-LRASNTQEILVGRVEALSEKVLGELKDDL 446
Cdd:PRK09542  392 VDHLDGVTVDLGDGSWFnLRASNTEPLLRLNVEARTEEEVDALVDEV 438
PGM_PMM_I pfam02878
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I;
6-137 6.07e-36

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I;


Pssm-ID: 427032  Cd Length: 138  Bit Score: 129.65  E-value: 6.07e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   6 KIFREYDIRGVVG-TEITHRFAYELGRAYGT-MAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPM 83
Cdd:pfam02878   2 QLFGTSGIRGKVGvGELTPEFALKLGQAIASyLRAQGGGGKVVVGRDTRYSSRELARALAAGLASNGVEVILLGLLPTPA 81
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1189039216  84 VYFAQRALNADGAIMITGSHNPAHMNGFKMMLK-GVSFFGDNIQKLYKTLTQSDF 137
Cdd:pfam02878  82 VSFATRKLKADGGIMITASHNPPEYNGIKVFDSnGGPIPPEVEKKIEAIIEKEDF 136
 
Name Accession Description Interval E-value
PMM_PGM cd03089
The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the ...
7-450 0e+00

The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100091  Cd Length: 443  Bit Score: 613.37  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   7 IFREYDIRGVVGTEITHRFAYELGRAYGTMAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYF 86
Cdd:cd03089     1 IFRAYDIRGIAGEELTEEIAYAIGRAFGSWLLEKGAKKVVVGRDGRLSSPELAAALIEGLLAAGCDVIDIGLVPTPVLYF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  87 AQRALNADGAIMITGSHNPAHMNGFKMMLKGVSFFGDNIQKLYKTLTQSDFF--ENAGSIEEVAFEGAYVEYLLEDFKth 164
Cdd:cd03089    81 ATFHLDADGGVMITASHNPPEYNGFKIVIGGGPLSGEDIQALRERAEKGDFAaaTGRGSVEKVDILPDYIDRLLSDIK-- 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 165 yETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTVPENLVELQQTVLSRKADLGIAFDGDGD 244
Cdd:cd03089   159 -LGKRPLKVVVDAGNGAAGPIAPQLLEALGCEVIPLFCEPDGTFPNHHPDPTDPENLEDLIAAVKENGADLGIAFDGDGD 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 245 RLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSPLAGEM 324
Cdd:cd03089   238 RLGVVDEKGEIIWGDRLLALFARDILKRNPGATIVYDVKCSRNLYDFIEEAGGKPIMWKTGHSFIKAKMKETGALLAGEM 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 325 SGHVFFGDRNFGFDDALYAALRLCGIVGMKEKPLSAWRLSLPKTYATPELHIQAQDVDKFKVIQSIRVELEKNNIDFIDV 404
Cdd:cd03089   318 SGHIFFKDRWYGFDDGIYAALRLLELLSKSGKTLSELLADLPKYFSTPEIRIPVTEEDKFAVIERLKEHFEFPGAEIIDI 397
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 1189039216 405 DGVRVVKKNGWWLLRASNTQEILVGRVEALSEKVLGELKDDLESHL 450
Cdd:cd03089   398 DGVRVDFEDGWGLVRASNTEPVLVLRFEADTEEGLEEIKAELRKLL 443
ManB COG1109
Phosphomannomutase [Carbohydrate transport and metabolism];
1-453 3.83e-160

Phosphomannomutase [Carbohydrate transport and metabolism];


Pssm-ID: 440726 [Multi-domain]  Cd Length: 456  Bit Score: 460.44  E-value: 3.83e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   1 MSYPqKIFREYDIRGVVGTEITHRFAYELGRAYGTMAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGP 80
Cdd:COG1109     1 MTYK-KLFGTDGIRGIVGEELTPEFVLKLGRAFGTYLKEKGGPKVVVGRDTRLSSPMLARALAAGLASAGIDVYDLGLVP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  81 TPMVYFAQRALNADGAIMITGSHNPAHMNGFKMML-KGVSFFGDNIQKLYKTLTQSDFF----ENAGSIEEVA-FEGAYV 154
Cdd:COG1109    80 TPALAFAVRHLGADGGIMITASHNPPEYNGIKFFDaDGGKLSPEEEKEIEALIEKEDFRraeaEEIGKVTRIEdVLEAYI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 155 EYLLEDFKTHyETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTvPENLVELQQTVLSRKAD 234
Cdd:COG1109   160 EALKSLVDEA-LRLRGLKVVVDCGNGAAGGVAPRLLRELGAEVIVLNAEPDGNFPNHNPNPE-PENLEDLIEAVKETGAD 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 235 LGIAFDGDGDRLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMK 314
Cdd:COG1109   238 LGIAFDGDADRLGVVDEKGRFLDGDQLLALLARYLLEKGPGGTVVVTVMSSLALEDIAEKHGGEVVRTKVGFKYIKEKMR 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 315 ELSSPLAGEMSGHVFFGDrNFGFDDALYAALRLCGIVGMKEKPLSAWRLSLPKtYATPELHIQAQDVDKF-KVIQSIRVE 393
Cdd:COG1109   318 ETGAVLGGEESGGIIFPD-FVPTDDGILAALLLLELLAKQGKSLSELLAELPR-YPQPEINVRVPDEEKIgAVMEKLREA 395
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1189039216 394 LEKnNIDFIDVDGVRVVKKNG-WWLLRASNTQEILVGRVEALSEKVLGELKDDLESHLKNY 453
Cdd:COG1109   396 VED-KEELDTIDGVKVDLEDGgWVLVRPSGTEPLLRVYAEAKDEEEAEELLAELAELVEEA 455
Arch_GlmM TIGR03990
phosphoglucosamine mutase; The MMP1680 protein from Methanococcus maripaludis has been ...
6-448 1.50e-113

phosphoglucosamine mutase; The MMP1680 protein from Methanococcus maripaludis has been characterized as the archaeal protein responsible for the second step of UDP-GlcNAc biosynthesis. This GlmM protein catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate. The first-characterized bacterial GlmM protein is modeled by TIGR01455. These two families are members of the larger phosphoglucomutase/phosphomannomutase family (characterized by three domains: pfam02878, pfam02879 and pfam02880), but are not nearest neighbors to each other. This model also includes a number of sequences from non-archaea in the Bacteroides, Chlorobi, Chloroflexi, Planctomycetes and Spirochaetes lineages. Evidence supporting their inclusion in this equivalog as having the same activity comes from genomic context and phylogenetic profiling. A large number of these organisms are known to produce exo-polysaccharide and yet only appeared to contain the GlmS enzyme of the GlmSMU pathway for UDP-GlcNAc biosynthesis (GenProp0750). In some organisms including Leptospira, this archaeal GlmM is found adjacent to the GlmS as well as a putative GlmU non-orthologous homolog. Phylogenetic profiling of the GlmS-only pattern using PPP identifies members of this archaeal GlmM family as the highest-scoring result. [Central intermediary metabolism, Amino sugars]


Pssm-ID: 274906  Cd Length: 443  Bit Score: 341.03  E-value: 1.50e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   6 KIFREYDIRGVVGTEITHRFAYELGRAYGTMAeaqGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVY 85
Cdd:TIGR03990   2 LLFGTSGIRGIVGEELTPELALKVGKAFGTYL---RGGKVVVGRDTRTSGPMLENAVIAGLLSTGCDVVDLGIAPTPTLQ 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  86 FAQRALNADGAIMITGSHNPAHMNGFKMMLK-GVSFFGDNIQKLYKTLTQSDFF----ENAGSIEEVA-FEGAYVEYLLE 159
Cdd:TIGR03990  79 YAVRELGADGGIMITASHNPPEYNGIKLLNSdGTELSREQEEEIEEIAESGDFEradwDEIGTVTSDEdAIDDYIEAILD 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 160 DFKTHYETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTvPENLVELQQTVLSRKADLGIAF 239
Cdd:TIGR03990 159 KVDVEAIRKKGFKVVVDCGNGAGSLTTPYLLRELGCKVITLNCQPDGTFPGRNPEPT-PENLKDLSALVKATGADLGIAH 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 240 DGDGDRLGVVDETAQIIWGDQLLILFAEEVLKtHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSP 319
Cdd:TIGR03990 238 DGDADRLVFIDEKGRFIGGDYTLALFAKYLLE-HGGGKVVTNVSSSRAVEDVAERHGGEVIRTKVGEVNVAEKMKEEGAV 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 320 LAGEMSGHVFFGDRNFGfDDALYAALRLCGIVGMKEKPLSAWRLSLPKtYATPELHIQAQDVDKFKVIQSIRVELEKNNI 399
Cdd:TIGR03990 317 FGGEGNGGWIFPDHHYC-RDGLMAAALFLELLAEEGKPLSELLAELPK-YPMSKEKVELPDEDKEEVMEAVEEEFADAEI 394
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 1189039216 400 DFIdvDGVRVVKKNGWWLLRASNTQEILVGRVEALSEKVLGELKDDLES 448
Cdd:TIGR03990 395 DTI--DGVRIDFEDGWVLVRPSGTEPIVRIYAEAKTEERAEELLEEGRS 441
PGM_like1 cd03087
This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the ...
13-448 3.76e-90

This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100089  Cd Length: 439  Bit Score: 281.00  E-value: 3.76e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  13 IRGVVGTEITHRFAYELGRAYGTMAeaqGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFAQRALN 92
Cdd:cd03087     7 IRGVVGEELTPELALKVGKALGTYL---GGGTVVVGRDTRTSGPMLKNAVIAGLLSAGCDVIDIGIVPTPALQYAVRKLG 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  93 aDGAIMITGSHNPAHMNGFKMMLK-GVSFFGDNIQKLYKTLTQSDF----FENAGSIEEVafEGA---YVEYLLEDFKTh 164
Cdd:cd03087    84 -DAGVMITASHNPPEYNGIKLVNPdGTEFSREQEEEIEEIIFSERFrrvaWDEVGSVRRE--DSAideYIEAILDKVDI- 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 165 yETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTvPENLVELQQTVLSRKADLGIAFDGDGD 244
Cdd:cd03087   160 -DGGKGLKVVVDCGNGAGSLTTPYLLRELGCKVITLNANPDGFFPGRPPEPT-PENLSELMELVRATGADLGIAHDGDAD 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 245 RLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLAdVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSPLAGEM 324
Cdd:cd03087   238 RAVFVDEKGRFIDGDKLLALLAKYLLEEGGGKVVTP-VDASMLVEDVVEEAGGEVIRTPVGDVHVAEEMIENGAVFGGEP 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 325 SGHVFFGDRNFGFDDAlYAALRLCGIVGmKEKPLSAWRLSLPKtYATPELHIQAQDVDKFKVIQSIRVELEKNNIDFIDV 404
Cdd:cd03087   317 NGGWIFPDHQLCRDGI-MTAALLLELLA-EEKPLSELLDELPK-YPLLREKVECPDEKKEEVMEAVEEELSDADEDVDTI 393
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1189039216 405 DGVRVVKKNGWWLLRASNTQEILVGRVEALSEKVLGELKDDLES 448
Cdd:cd03087   394 DGVRIEYEDGWVLIRPSGTEPKIRITAEAKTEERAKELLEEGRS 437
manB PRK09542
phosphomannomutase/phosphoglucomutase; Reviewed
8-446 1.19e-81

phosphomannomutase/phosphoglucomutase; Reviewed


Pssm-ID: 236557  Cd Length: 445  Bit Score: 259.14  E-value: 1.19e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   8 FREYDIRGVVGTEITHRFAYELGRAYGTMAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFA 87
Cdd:PRK09542    1 IKAYDVRGVVGEQIDEDLVRDVGAAFARLMRAEGATTVVIGHDMRDSSPELAAAFAEGVTAQGLDVVRIGLASTDQLYFA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  88 QRALNADGAiMITGSHNPAHMNGFKMMLKGVSFFG-----DNIQKLyktLTQS--DFFENAGSIEEVAFEGAYVEYLLED 160
Cdd:PRK09542   81 SGLLDCPGA-MFTASHNPAAYNGIKLCRAGAKPVGqdtglAAIRDD---LIAGvpAYDGPPGTVTERDVLADYAAFLRSL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 161 FKThyETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTVPENLVELQQTVLSRKADLGIAFD 240
Cdd:PRK09542  157 VDL--SGIRPLKVAVDAGNGMGGHTVPAVLGGLPITLLPLYFELDGTFPNHEANPLDPANLVDLQAFVRETGADIGLAFD 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 241 GDGDRLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSPL 320
Cdd:PRK09542  235 GDADRCFVVDERGQPVSPSAVTALVAARELAREPGATIIHNLITSRAVPELVAERGGTPVRTRVGHSFIKALMAETGAIF 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 321 AGEMSGHVFFGDRnFGFDDALYAALRLCGIVGMKEKPLSAWRLSLPKTYATPELHIQAQDVDkfKVIQSIRVELEKNNID 400
Cdd:PRK09542  315 GGEHSAHYYFRDF-WGADSGMLAALHVLAALGEQDRPLSELMADYQRYAASGEINSTVADAP--ARMEAVLKAFADRIVS 391
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1189039216 401 FIDVDGVRVVKKNGWWL-LRASNTQEILVGRVEALSEKVLGELKDDL 446
Cdd:PRK09542  392 VDHLDGVTVDLGDGSWFnLRASNTEPLLRLNVEARTEEEVDALVDEV 438
PRK15414 PRK15414
phosphomannomutase;
8-443 8.39e-70

phosphomannomutase;


Pssm-ID: 185312  Cd Length: 456  Bit Score: 228.68  E-value: 8.39e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   8 FREYDIRGVVGTEITHRFAYELGRAYGtmaEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFA 87
Cdd:PRK15414    7 FKAYDIRGKLGEELNEDIAWRIGRAYG---EFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  88 QRALNADGAIMITGSHNPAHMNGFKMMLKGVS-FFGDNIQKLYKTLTQSDFF-----ENAGSIEEVAFEGAYVEYLLEdf 161
Cdd:PRK15414   84 TFHLGVDGGIEVTASHNPMDYNGMKLVREGARpISGDTGLRDVQRLAEANDFppvdeTKRGRYQQINLRDAYVDHLFG-- 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 162 KTHYETSRPLRVVWDVGNGAMG---NALQRLLKKM--PGEHIVLNGTIDGHFPAHHPDPTVPENLVELQQTVLSRKADLG 236
Cdd:PRK15414  162 YINVKNLTPLKLVINSGNGAAGpvvDAIEARFKALgaPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADMG 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 237 IAFDGDGDRLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKEL 316
Cdd:PRK15414  242 IAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKE 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 317 SSPLAGEMSGHVFFgdRNFGF-DDALYAALRLCGIVGMKEKPLSawRLSLPKTYATPEL-HIQAQDVDKFKVIQSIRVEL 394
Cdd:PRK15414  322 DAIYGGEMSAHHYF--RDFAYcDSGMIPWLLVAELVCLKGKTLG--ELVRDRMAAFPASgEINSKLAQPVEAINRVEQHF 397
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 1189039216 395 EKNNIDFIDVDGVRVVKKNGWWLLRASNTQEILVGRVEALSEKVLGELK 443
Cdd:PRK15414  398 SREALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDVPLMEAR 446
PGM_like4 cd05803
This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate ...
13-444 3.61e-63

This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes. This domain belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100096  Cd Length: 445  Bit Score: 211.01  E-value: 3.61e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  13 IRGVVGTEITHRFAYELGRAYGTMAEAQGAQK-IVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFAQRAL 91
Cdd:cd05803     7 IRGIVGEGLTPEVITRYVAAFATWQPERTKGGkIVVGRDGRPSGPMLEKIVIGALLACGCDVIDLGIAPTPTVQVLVRQS 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  92 NADGAIMITGSHNPAHMNGFKMMLKGVSFF-GDNIQKLYKTLTQSDFF----ENAGSIeeVAFEGAYVEYLLEDFKTHY- 165
Cdd:cd05803    87 QASGGIIITASHNPPQWNGLKFIGPDGEFLtPDEGEEVLSCAEAGSAQkagyDQLGEV--TFSEDAIAEHIDKVLALVDv 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 166 ----ETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPaHHPDPTvPENLVELQQTVLSRKADLGIAFDG 241
Cdd:cd05803   165 dvikIRERNFKVAVDSVNGAGGLLIPRLLEKLGCEVIVLNCEPTGLFP-HTPEPL-PENLTQLCAAVKESGADVGFAVDP 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 242 DGDRLGVVDETAQIIWGDQLLILFAEEVLKTHPGAT-VLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSPL 320
Cdd:cd05803   243 DADRLALVDEDGRPIGEEYTLALAVDYVLKYGGRKGpVVVNLSTSRALEDIARKHGVPVFRSAVGEANVVEKMKEVDAVI 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 321 AGEMSGHVFFGDRNFGFDDALYAALRLCGIVGMkEKPLSAWRLSLPKTYatpelhIQAQDVD-KFKVIQSIRVELEKNNI 399
Cdd:cd05803   323 GGEGNGGVILPDVHYGRDSLVGIALVLQLLAAS-GKPLSEIVDELPQYY------ISKTKVTiAGEALERLLKKLEAYFK 395
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1189039216 400 DF-ID-VDGVRVVKKNGWWLLRASNTQEILVGRVEALSEKVLGELKD 444
Cdd:cd05803   396 DAeAStLDGLRLDSEDSWVHVRPSNTEPIVRIIAEAPTQDEAEALAD 442
GlmM cd05802
GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the ...
13-446 2.51e-61

GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100095  Cd Length: 434  Bit Score: 205.80  E-value: 2.51e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  13 IRGVVGTEITHRFAYELGRAYGTM-AEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFAQRAL 91
Cdd:cd05802     7 IRGVANEPLTPELALKLGRAAGKVlGKGGGRPKVLIGKDTRISGYMLESALAAGLTSAGVDVLLLGVIPTPAVAYLTRKL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  92 NADGAIMITGSHNPAHMNGFKmmlkgvsFFGDNIQKLyktltqSDFFENA------------------GSIEEVAF-EGA 152
Cdd:cd05802    87 RADAGVVISASHNPFEDNGIK-------FFSSDGYKL------PDEVEEEiealidkelelpptgekiGRVYRIDDaRGR 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 153 YVEYLLEDFKTHYETSrpLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDG-----HFPAHHPDPtvpenlveLQQT 227
Cdd:cd05802   154 YIEFLKSTFPKDLLSG--LKIVLDCANGAAYKVAPEVFRELGAEVIVINNAPDGlninvNCGSTHPES--------LQKA 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 228 VLSRKADLGIAFDGDGDRLGVVDETAQIIWGDQLLILFAEEVLKTH--PGATVLADVKASQVLFDKIKEMGGNPLMSRTG 305
Cdd:cd05802   224 VLENGADLGIAFDGDADRVIAVDEKGNIVDGDQILAICARDLKERGrlKGNTVVGTVMSNLGLEKALKELGIKLVRTKVG 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 306 HSLIKTKMKELSSPLAGEMSGHVFFGDRNF-GfdDALYAALRLCGIVGMKEKPLSAWRLSLPKtyaTPELHIQAQDVDKF 384
Cdd:cd05802   304 DRYVLEEMLKHGANLGGEQSGHIIFLDHSTtG--DGLLTALQLLAIMKRSGKSLSELASDMKL---YPQVLVNVRVKDKK 378
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1189039216 385 KVIQSIRVELEKNNIDFIDVDGVRVvkkngwwLLRASNTqEILVgRV--EALSEKVLGELKDDL 446
Cdd:cd05802   379 ALLENPRVQAAIAEAEKELGGEGRV-------LVRPSGT-EPLI-RVmvEGEDEELVEKLAEEL 433
phosphohexomutase cd03084
The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a ...
7-444 7.19e-59

The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). These enzymes play important and diverse roles in carbohydrate metabolism in organisms from bacteria to humans. Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100086 [Multi-domain]  Cd Length: 355  Bit Score: 197.19  E-value: 7.19e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   7 IFREYDIRGVVGTEITHRFAYELGRAYGTMaeaqgaqkivigydgrlsspdlvmglqeglkksgravinvglgptpmvyf 86
Cdd:cd03084     1 IFGTSGVRGVVGDDITPETAVALGQAIGST-------------------------------------------------- 30
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  87 aqralnadGAIMITGSHNPAHMNGFKMML-KGVSFFGDNIQKLYKTLTQSDFF-----ENAGSIEEVAFEGAYVEYLLED 160
Cdd:cd03084    31 --------GGIMITASHNPPEDNGIKFVDpDGEPIASEEEKAIEDLAEKEDEPsavayELGGSVKAVDILQRYFEALKKL 102
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 161 FKTHYETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTVPENLVELQQTVLSRKADLGIAFD 240
Cdd:cd03084   103 FDVAALSNKKFKVVVDSVNGVGGPIAPQLLEKLGAEVIPLNCEPDGNFGNINPDPGSETNLKQLLAVVKAEKADFGVAFD 182
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 241 GDGDRLGVVDETAQIIWGDQLLILFAEEVLKTH-PGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSP 319
Cdd:cd03084   183 GDADRLIVVDENGGFLDGDELLALLAVELFLTFnPRGGVVKTVVSSGALDKVAKKLGIKVIRTKTGFKWVGEAMQEGDVV 262
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 320 LAGEMSGHVFFGDrNFGFDDALYAALRLCGIVGMKEKPLSAWRLSLPKTYATPelhiqaqdvdkfkviqsirveleknni 399
Cdd:cd03084   263 LGGEESGGVIFPE-FHPGRDGISAALLLLEILANLGKSLSELFSELPRYYYIR--------------------------- 314
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 1189039216 400 dfidvdgvrvVKKNGWWLLRASNTQEILVGRVEALSEKVLGELKD 444
Cdd:cd03084   315 ----------LKVRGWVLVRASGTEPAIRIYAEADTQEDVEQIKK 349
PGM_like2 cd05800
This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the ...
14-450 3.05e-52

This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.


Pssm-ID: 100093  Cd Length: 461  Bit Score: 182.37  E-value: 3.05e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  14 RGVVGTEIT----HRFAyelgRAYGTM--AEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGravINVGLG----PTPM 83
Cdd:cd05800     9 RGIIAEDFTfenvRRVA----QAIADYlkEEGGGGRGVVVGYDTRFLSEEFARAVAEVLAANG---IDVYLSdrpvPTPA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  84 VYFAQRALNADGAIMITGSHNPAHMNGFKmmLKGvsFFG--------DNIQKLYKTLTQSDFFE-NAGSIEEVAFEGAYV 154
Cdd:cd05800    82 VSWAVKKLGAAGGVMITASHNPPEYNGVK--VKP--AFGgsalpeitAAIEARLASGEPPGLEArAEGLIETIDPKPDYL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 155 EYLLEDFKTHYETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTvPENLVELQQTVLSRKAD 234
Cdd:cd05800   158 EALRSLVDLEAIREAGLKVVVDPMYGAGAGYLEELLRGAGVDVEEIRAERDPLFGGIPPEPI-EKNLGELAEAVKEGGAD 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 235 LGIAFDGDGDRLGVVDETAQIIWGDQLLILFAEEVLKT--HPGA---TVladvkASQVLFDKIKEMGGNPLM-SRTGHSL 308
Cdd:cd05800   237 LGLATDGDADRIGAVDEKGNFLDPNQILALLLDYLLENkgLRGPvvkTV-----STTHLIDRIAEKHGLPVYeTPVGFKY 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 309 IKTKMKELSSPLAGEMSGHVFFGD----RnfgfdDALYAALRLCGIVGMKEKPLSAWRLSL-----PKTYATPELHIQAQ 379
Cdd:cd05800   312 IAEKMLEEDVLIGGEESGGLGIRGhipeR-----DGILAGLLLLEAVAKTGKPLSELVAELeeeygPSYYDRIDLRLTPA 386
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1189039216 380 DVDKFKVIQSIRVELEKNN---IDFIDVDGVRVVKKNGWWLL-RASNTQEILvgRV--EALSEKVLGELKDDLESHL 450
Cdd:cd05800   387 QKEAILEKLKNEPPLSIAGgkvDEVNTIDGVKLVLEDGSWLLiRPSGTEPLL--RIyaEAPSPEKVEALLDAGKKLA 461
glmM TIGR01455
phosphoglucosamine mutase; This model describes GlmM, phosphoglucosamine mutase, also ...
13-446 3.31e-49

phosphoglucosamine mutase; This model describes GlmM, phosphoglucosamine mutase, also designated in MrsA and YhbF E. coli, UreC in Helicobacter pylori, and femR315 or FemD in Staphlococcus aureus. It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Central intermediary metabolism, Amino sugars]


Pssm-ID: 130522  Cd Length: 443  Bit Score: 174.09  E-value: 3.31e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  13 IRGVVGTE-ITHRFAYELGRAYGTMAEAQ--GAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFAQR 89
Cdd:TIGR01455   6 VRGRAGQEpLTAELALLLGAAAGRVLRQGrdTAPRVVIGKDTRLSGYMLENALAAGLNSAGVDVLLLGPLPTPAVAYLTR 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  90 ALNADGAIMITGSHNPAHMNGFKmmlkgvsFFGDNIQKLYKTLTQS--------DFFENAGS------IEEVAFEGAYVE 155
Cdd:TIGR01455  86 TLRADAGVMISASHNPYEDNGIK-------FFGPGGFKLDDATEAAiealldeaDPLPRPESeglgrvKRYPDAVGRYIE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 156 YLLEDFkTHYETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDG-----HFPAHHPDPtvpenlveLQQTVLS 230
Cdd:TIGR01455 159 FLKSTL-PRGLTLSGLKVVLDCANGAAYKVAPHVFRELGAEVIAIGVEPDGlnindGCGSTHLDA--------LQKAVRE 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 231 RKADLGIAFDGDGDRLGVVDETAQIIWGDQLLILFAEEVLKTH--PGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSL 308
Cdd:TIGR01455 230 HGADLGIAFDGDADRVLAVDANGRIVDGDQILYIIARALKESGelAGNTVVATVMSNLGLERALEKLGLTLIRTAVGDRY 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 309 IKTKMKELSSPLAGEMSGHVFFGDRNFGfDDALYAALRLCGIVGMKEKPLSAwrlslpktyATPELHIQAQdvdkfkVIQ 388
Cdd:TIGR01455 310 VLEEMRESGYNLGGEQSGHIILLDYSTT-GDGIVSALQVLTIMKKSGSTLSE---------LAAEFVPYPQ------TLV 373
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1189039216 389 SIRVELEKNNIDFID------VDGVRVVKKNGWWLLRASNTQEILVGRVEALSEKVLGELKDDL 446
Cdd:TIGR01455 374 NVRVADRKLAAAEAPavkaaiEDAEAELGGTGRILLRPSGTEPLIRVMVEAADEELVQQLADTL 437
MPG1_transferase cd05805
GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose ...
7-417 9.83e-43

GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100097  Cd Length: 441  Bit Score: 156.25  E-value: 9.83e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   7 IFREYDIRGVVGTEITHRFAYELGRAYGTMAEAqGAqKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYF 86
Cdd:cd05805     1 LFGGRGVSGLINVDITPEFATRLGAAYGSTLPP-GS-TVTVSRDASRASRMLKRALISGLLSTGVNVRDLGALPLPVARY 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  87 AQRALNADGAIMI-TGSHNPAHMNgfkmmlkgVSFF---GDNIQ-----KLYKTLTQSDF----FENAGSIEEVA-FEGA 152
Cdd:cd05805    79 AIRFLGASGGIHVrTSPDDPDKVE--------IEFFdsrGLNISramerKIENAFFREDFrrahVDEIGDITEPPdFVEY 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 153 YVEYLLEDFKTHYETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDghFPAHHPDPTVPENLVELQQTVLSRK 232
Cdd:cd05805   151 YIRGLLRALDTSGLKKSGLKVVIDYAYGVAGIVLPGLLSRLGCDVVILNARLD--EDAPRTDTERQRSLDRLGRIVKALG 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 233 ADLGIAFDGDGDRLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTK 312
Cdd:cd05805   229 ADFGVIIDPNGERLILVDEAGRVISDDLLTALVSLLVLKSEPGGTVVVPVTAPSVIEQLAERYGGRVIRTKTSPQALMEA 308
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 313 MKElSSPLAGEMSGHVFFGDRNFGFdDALYAALRLCGIVGMKEKPLSAWRLSLPKTY-ATPELHIQAQdvDKFKVIQSIR 391
Cdd:cd05805   309 ALE-NVVLAGDGDGGFIFPEFHPGF-DAIAALVKILEMLARTNISLSQIVDELPRFYvLHKEVPCPWE--AKGRVMRRLI 384
                         410       420
                  ....*....|....*....|....*.
gi 1189039216 392 VELEKNNIDFIdvDGVRVVKKNGWWL 417
Cdd:cd05805   385 EEAPDKSIELI--DGVKIYEDDGWVL 408
PLN02371 PLN02371
phosphoglucosamine mutase family protein
12-445 1.34e-40

phosphoglucosamine mutase family protein


Pssm-ID: 215211 [Multi-domain]  Cd Length: 583  Bit Score: 152.90  E-value: 1.34e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  12 DIRGVV--GTE-----ITHRFAYELGRAYG------TMAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGL 78
Cdd:PLN02371   72 DIRGVAveGVEgepvtLTPPAVEAIGAAFAewllekKKADGSGELRVSVGRDPRISGPRLADAVFAGLASAGLDVVDMGL 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  79 GPTPMVYFAQRA--LNADGAIMITGSHNPAHMNGFKMMLKG-------VSFFGDNIQKLYK----TLTQSDFFENAGSIE 145
Cdd:PLN02371  152 ATTPAMFMSTLTerEDYDAPIMITASHLPYNRNGLKFFTKDgglgkpdIKDILERAARIYKewsdEGLLKSSSGASSVVC 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 146 EVAFEGAYVEYLLEDFK------THYETsrPLR---VVWDVGNGAMGNALQRLLKKMpgehivlnGTI---------DGH 207
Cdd:PLN02371  232 RVDFMSTYAKHLRDAIKegvghpTNYET--PLEgfkIVVDAGNGAGGFFAEKVLEPL--------GADtsgslflepDGM 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 208 FPAHHPDPTVPENLVELQQTVLSRKADLGIAFDGDGDRLGVVDETAQIIWGDQLLILFAEEVLKTHPGATVLADVKASQV 287
Cdd:PLN02371  302 FPNHIPNPEDKAAMSATTQAVLANKADLGIIFDTDVDRSAVVDSSGREINRNRLIALMSAIVLEEHPGTTIVTDSVTSDG 381
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 288 LFDKIKEMGGNPLMSRTGHSLIKTKMKELS-----SPLAGEMSGHVFFGDrNFGFDDALY---------AALRLCG---- 349
Cdd:PLN02371  382 LTTFIEKKGGKHHRFKRGYKNVIDKGVRLNsdgeeTHLMIETSGHGALKE-NHFLDDGAYlavkiiielVRMRAAGaggg 460
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 350 ----IVGMKEKPLSA-WRLslpKTYATPElHIQA---QDVDKFKviQSIRvELEKNNIDFIDVDGVRVVKKN----GWWL 417
Cdd:PLN02371  461 lgdlIEDLEEPLEAVeLRL---KILDEGK-DFKAygeEVLEHLR--NSIE-SDGKLEGAPVNYEGVRVSDEGegfgGWFL 533
                         490       500       510
                  ....*....|....*....|....*....|....*.
gi 1189039216 418 LRAS--------NTQEILVGRVEALSEKVLGELKDD 445
Cdd:PLN02371  534 LRQSlhdpviplNIESSSPGGAQKMALVVLTWLKEF 569
PGM_PMM_I pfam02878
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I;
6-137 6.07e-36

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I;


Pssm-ID: 427032  Cd Length: 138  Bit Score: 129.65  E-value: 6.07e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216   6 KIFREYDIRGVVG-TEITHRFAYELGRAYGT-MAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPM 83
Cdd:pfam02878   2 QLFGTSGIRGKVGvGELTPEFALKLGQAIASyLRAQGGGGKVVVGRDTRYSSRELARALAAGLASNGVEVILLGLLPTPA 81
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1189039216  84 VYFAQRALNADGAIMITGSHNPAHMNGFKMMLK-GVSFFGDNIQKLYKTLTQSDF 137
Cdd:pfam02878  82 VSFATRKLKADGGIMITASHNPPEYNGIKVFDSnGGPIPPEVEKKIEAIIEKEDF 136
glmM PRK10887
phosphoglucosamine mutase; Provisional
13-272 5.00e-31

phosphoglucosamine mutase; Provisional


Pssm-ID: 236787  Cd Length: 443  Bit Score: 124.09  E-value: 5.00e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  13 IRGVVGTE-ITHRFAYELGRAYGTMAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFAQRAL 91
Cdd:PRK10887    9 IRGKVGQApITPDFVLKLGWAAGKVLARQGRPKVLIGKDTRISGYMLESALEAGLAAAGVDVLLTGPMPTPAVAYLTRTL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  92 NADGAIMITGSHNPAHMNGFKmmlkgvsFFG-------DNIQ-----KLYKTLT--QSDFFENAGSIEEVAfeGAYVEYL 157
Cdd:PRK10887   89 RAEAGIVISASHNPYYDNGIK-------FFSadgtklpDEVElaieaELDKPLTcvESAELGKASRINDAA--GRYIEFC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 158 LEDFKTHYeTSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDG-----HFPAHHPDptvpenlvELQQTVLSRK 232
Cdd:PRK10887  160 KSTFPNEL-SLRGLKIVVDCANGATYHIAPNVFRELGAEVIAIGCEPNGlnindECGATDPE--------ALQAAVLAEK 230
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1189039216 233 ADLGIAFDGDGDRLGVVDETAQIIWGDQLLILFAEEVLKT 272
Cdd:PRK10887  231 ADLGIAFDGDGDRVIMVDHLGNLVDGDQLLYIIARDRLRR 270
PGM_PMM_II pfam02879
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II;
152-251 7.10e-30

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II;


Pssm-ID: 427033  Cd Length: 102  Bit Score: 112.00  E-value: 7.10e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 152 AYVEYLLEDFKTHYETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVLNGTIDGHFPAHHPDPTVPENLVELQQTVLSR 231
Cdd:pfam02879   1 AYIDHLLELVDSEALKKRGLKVVYDPLHGVGGGYLPELLKRLGCDVVEENCEPDPDFPTRAPNPEEPEALALLIELVKSV 80
                          90       100
                  ....*....|....*....|
gi 1189039216 232 KADLGIAFDGDGDRLGVVDE 251
Cdd:pfam02879  81 GADLGIATDGDADRLGVVDE 100
PGM_PMM_III pfam02880
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III;
257-369 2.96e-27

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III;


Pssm-ID: 460733  Cd Length: 115  Bit Score: 105.22  E-value: 2.96e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 257 WGDQLLILFAEEVLKT---HPGATVLADVKASQVLFDKIKEMGGNPLMSRTGHSLIKTKMKELSSPLAGEMSGHVFFGDR 333
Cdd:pfam02880   1 DGDQILALLAKYLLEQgklPPGAGVVKTVMSSLGLDRVAKKLGGKLVRTPVGDKYVKEKMREEGALFGGEESGHIIFLDH 80
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1189039216 334 NFgFDDALYAALRLCGIVGMKEKPLSAWRLSLPKTY 369
Cdd:pfam02880  81 AT-TKDGILAALLVLEILARTGKSLSELLEELPEKY 115
PGM2 cd05799
This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The ...
13-271 6.95e-21

This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100092  Cd Length: 487  Bit Score: 94.88  E-value: 6.95e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  13 IRGVVG-----------TEITHRFAYELGRAYGtmaeAQGAQKIVIGYDGRLSSPD------LVMgLQEGLKksgrAVIN 75
Cdd:cd05799     9 LRGKMGagtnrmndytvRQATQGLANYLKKKGP----DAKNRGVVIGYDSRHNSREfaeltaAVL-AANGIK----VYLF 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  76 VGLGPTPMVYFAQRALNADGAIMITGSHNPAHMNGFKMMLKG----VSFFGDNIQK-----LYKTLTQSDFFENAGSIEE 146
Cdd:cd05799    80 DDLRPTPLLSFAVRHLGADAGIMITASHNPKEYNGYKVYWEDgaqiIPPHDAEIAEeieavLEPLDIKFEEALDSGLIKY 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 147 VAFE--GAYVEYLLED-FKTHYETSRPLRVVWDVGNGAMGNALQRLLKKMPGEHIVL---NGTIDGHFP-AHHPDPTVPE 219
Cdd:cd05799   160 IGEEidDAYLEAVKKLlVNPELNEGKDLKIVYTPLHGVGGKFVPRALKEAGFTNVIVveeQAEPDPDFPtVKFPNPEEPG 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1189039216 220 NLVELQQTVLSRKADLGIAFDGDGDRLGVV----DETAQIIWGDQLLILFAEEVLK 271
Cdd:cd05799   240 ALDLAIELAKKVGADLILATDPDADRLGVAvkdkDGEWRLLTGNEIGALLADYLLE 295
PGM1 cd03085
Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate ...
36-245 5.78e-13

Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100087 [Multi-domain]  Cd Length: 548  Bit Score: 70.71  E-value: 5.78e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  36 MAEAQGAQKIVIGYDGRLSSPdlvmglqeglkkSGRAVInvglgptpmvyfaqRALNADGAIMITGSHNPAHMNG-Fkmm 114
Cdd:cd03085    72 IAAANGVGKVVVGQNGLLSTP------------AVSAVI--------------RKRKATGGIILTASHNPGGPEGdF--- 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 115 lkGVSF-----------FGDNIQKLYKTLTQSDFFENA----GSIEEVAFEG------------AYVEYLLE--DFKT-- 163
Cdd:cd03085   123 --GIKYntsnggpapesVTDKIYEITKKITEYKIADDPdvdlSKIGVTKFGGkpftvevidsveDYVELMKEifDFDAik 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 164 HYETSRPLRVVWDVGNGAMGNALQRLLKKMPG--EHIVLNGTIDGHFPAHHPDPtvpeNLV---ELQQTVLSRKADLGIA 238
Cdd:cd03085   201 KLLSRKGFKVRFDAMHGVTGPYAKKIFVEELGapESSVVNCTPLPDFGGGHPDP----NLTyakDLVELMKSGEPDFGAA 276

                  ....*..
gi 1189039216 239 FDGDGDR 245
Cdd:cd03085   277 SDGDGDR 283
ManB cd03088
ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose ...
14-112 3.90e-12

ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate. In Mycobacterium tuberculosis, the causative agent of tuberculosis, PMM is involved in the biosynthesis of mannosylated lipoglycans that participate in the association of mycobacteria with host macrophage phagocytic receptors. ManB belongs to the the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100090  Cd Length: 459  Bit Score: 68.00  E-value: 3.90e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  14 RGVVgTEITHRFAYELGRAYGT-MAEAQGAQKIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFAQRALN 92
Cdd:cd03088     8 RGLV-TDLTDEVCYAYTRAFLQhLESKFPGDTVAVGRDLRPSSPRIAAACAAALRDAGFRVVDCGAVPTPALALYAMKRG 86
                          90       100
                  ....*....|....*....|
gi 1189039216  93 AdGAIMITGSHNPAHMNGFK 112
Cdd:cd03088    87 A-PAIMVTGSHIPADRNGLK 105
PTZ00150 PTZ00150
phosphoglucomutase-2-like protein; Provisional
35-266 4.86e-11

phosphoglucomutase-2-like protein; Provisional


Pssm-ID: 240294  Cd Length: 584  Bit Score: 64.70  E-value: 4.86e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  35 TMAEAQGAQKIVIGYDGRLSSPDL------VMgLQEGLKKS--GRAVinvglgPTPMVYFAQRALNADGAIMITGSHNPA 106
Cdd:PTZ00150   82 TFGQALKSRGVVIGYDGRYHSRRFaeitasVF-LSKGFKVYlfGQTV------PTPFVPYAVRKLKCLAGVMVTASHNPK 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 107 HMNGFKM-----------MLKGVSFFgdnIQKLYKTLTQSDFFENAGSIEEVAFE--GAYVEYLLEDFKTHYETSRPLRV 173
Cdd:PTZ00150  155 EDNGYKVywsngaqiippHDKNISAK---ILSNLEPWSSSWEYLTETLVEDPLAEvsDAYFATLKSEYNPACCDRSKVKI 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 174 VWDvgngAMGNALQRLLKKMpgEHIV-LNGTI--------DGHFPA-HHPDPTVPENLVELQ-QTVLSRKADLGIAFDGD 242
Cdd:PTZ00150  232 VYT----AMHGVGTRFVQKA--LHTVgLPNLLsvaqqaepDPEFPTvTFPNPEEGKGALKLSmETAEAHGSTVVLANDPD 305
                         250       260
                  ....*....|....*....|....*..
gi 1189039216 243 GDRLGVV---DETAQIIWGDQLLILFA 266
Cdd:PTZ00150  306 ADRLAVAeklNNGWKIFTGNELGALLA 332
PGM3 cd03086
PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 ...
44-266 2.14e-07

PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway. UDP-GlcNAc is an essential metabolite that serves as the biosynthetic precursor of many glycoproteins and mucopolysaccharides. AGM1 is a member of the alpha-D-phosphohexomutase superfamily, which catalyzes the intramolecular phosphoryl transfer of sugar substrates. The alpha-D-phosphohexomutases have four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.


Pssm-ID: 100088  Cd Length: 513  Bit Score: 52.98  E-value: 2.14e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  44 KIVIGYDGRLSSPDLVMGLQEGLKKSGRAVINVGLGPTPMVYFAQRALNADGAimitgshnpahmngfkmmlkgvsFFGD 123
Cdd:cd03086   104 NVFVGRDTRPSGPALLQALLDGLKALGGNVIDYGLVTTPQLHYLVRAANTEGA-----------------------YGEP 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 124 NIQKLYKTLTQsdffenagsieevAFEGAYveYLLEDFKTHYETsrplrVVWDVGNGAMGNALQRLLKKMPGEHIV--LN 201
Cdd:cd03086   161 TEEGYYEKLSK-------------AFNELY--NLLQDGGDEPEK-----LVVDCANGVGALKLKELLKRLKKGLSVkiIN 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 202 GTIDGHFP------AHHpdptvpenlVELQQT-----VLSRKADLGIAFDGDGDRLgvV------DETAQIIWGDQLLIL 264
Cdd:cd03086   221 DGEEGPELlndgcgADY---------VKTKQKpprgfELKPPGVRCCSFDGDADRL--VyfypdsSNKFHLLDGDKIATL 289

                  ..
gi 1189039216 265 FA 266
Cdd:cd03086   290 FA 291
PTZ00302 PTZ00302
N-acetylglucosamine-phosphate mutase; Provisional
44-267 3.69e-07

N-acetylglucosamine-phosphate mutase; Provisional


Pssm-ID: 240352 [Multi-domain]  Cd Length: 585  Bit Score: 52.35  E-value: 3.69e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  44 KIVIGYDGRLSSPDLVMGLQEGLKKSGRA-VINVGLGPTPMVYFAQRALNA---DGAIMITGSHNPAHMNGFKMMLKGVS 119
Cdd:PTZ00302  154 KVHVGRDTRPSSPELVSALLRGLKLLIGSnVRNFGIVTTPQLHFLVAFANGlgvDVVESSDELYYAYLLAAFKELYRTLQ 233
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 120 FfgdniqklyktLTQSDFFENagsieevafegayveylledfkthyetsRPLRVVWDVGNGAMGNALQRL---LKKMPGE 196
Cdd:PTZ00302  234 E-----------GGPVDLTQN----------------------------NSKILVVDCANGVGGYKIKRFfeaLKQLGIE 274
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216 197 HIVLNGTIDGHFP------AHHPDPT--VPENLVELQQTVLSRKAdlgiAFDGDGDRL------GVVDETAQIIWGDQLL 262
Cdd:PTZ00302  275 IIPININCDEEELlndkcgADYVQKTrkPPRAMKEWPGDEETRVA----SFDGDADRLvyffpdKDGDDKWVLLDGDRIA 350

                  ....*
gi 1189039216 263 ILFAE 267
Cdd:PTZ00302  351 ILYAM 355
PGM_PMM_IV pfam00408
Phosphoglucomutase/phosphomannomutase, C-terminal domain;
405-451 1.79e-05

Phosphoglucomutase/phosphomannomutase, C-terminal domain;


Pssm-ID: 425666  Cd Length: 71  Bit Score: 42.64  E-value: 1.79e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1189039216 405 DGVRVVKKNGWWL-LRASNTQEILVGRVEALSEKVLGELKDDLESHLK 451
Cdd:pfam00408  24 DAEKILGEDGRRLdVRPSGTEPVLRVMVEGDSDEELARLADEIADLLE 71
2A0601 TIGR00914
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ...
243-389 2.05e-03

heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 129992 [Multi-domain]  Cd Length: 1051  Bit Score: 40.90  E-value: 2.05e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189039216  243 GDRLGVVDETAQIIwgdqllilfaEEVLKTHPGATvlaDVKASQ--------VLFDKIKemggnplMSRTGHSlIKTKMK 314
Cdd:TIGR00914  690 GDDLDDLDATAEKI----------SAVLKGVPGAA---DVKVEQttglpyltVEIDREK-------AARYGLT-VGDVQD 748
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1189039216  315 ELSSPLAGEMSGHVFFGDRNFGFddalyaALRLCGIVGMKEKPLSAWRLSLPKTYATPELHIQAQDVDKFKVIQS 389
Cdd:TIGR00914  749 TVATAVGGRMSGETFEGDRRFDI------VIRLPESLRESPQALRQLPIPLPLSEDARKQFIPLSDVADLRVSPG 817
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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