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Conserved domains on  [gi|1314858917|gb|AUG15731|]
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fimbrial protein [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
3-171 7.15e-42

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 137.86  E-value: 7.15e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917   3 KRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRF-SHGNYGPEKSFIINLQDCGTDV 81
Cdd:COG3539     2 KKLLLALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLnGVGSTSGPKPFSIKLTNCDAGT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  82 S-TVDVTFSGTPDGVQSEMLSIeSGTDAASGLAIAILDDAKILIPLNQASKDYSLHS-GKVPLTFYAQLRPVNSDVQSGK 159
Cdd:COG3539    82 SnSVKVTFTGTADSANPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSnGSATLPFYARYVATGATVTAGS 160

                         170
                  ....*....|..
gi 1314858917 160 VNASATFVLHYD 171
Cdd:COG3539   161 FNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
3-171 7.15e-42

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 137.86  E-value: 7.15e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917   3 KRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRF-SHGNYGPEKSFIINLQDCGTDV 81
Cdd:COG3539     2 KKLLLALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLnGVGSTSGPKPFSIKLTNCDAGT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  82 S-TVDVTFSGTPDGVQSEMLSIeSGTDAASGLAIAILDDAKILIPLNQASKDYSLHS-GKVPLTFYAQLRPVNSDVQSGK 159
Cdd:COG3539    82 SnSVKVTFTGTADSANPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSnGSATLPFYARYVATGATVTAGS 160

                         170
                  ....*....|..
gi 1314858917 160 VNASATFVLHYD 171
Cdd:COG3539   161 FNATATFTIDYQ 172
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 22-171 1.71e-29

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 106.34  E-value: 1.71e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  22 AHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSH-GNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEML 100
Cdd:PRK15191   20 AHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRaGDGSAWQPFAIDLQNCGSTASGVTVSFSGAADSRNTDLL 99

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1314858917 101 SIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVP--LTFYAQLRPVNSDVQSGKVNASATFVLHYD 171
Cdd:PRK15191  100 ALTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASahLQFYARYLADGGAVTPGDANASATFILAYE 172
Fimbrial pfam00419
Fimbrial protein;
27-171 6.60e-14

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 65.15  E-value: 6.60e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  27 VNISG--SFRRNTCVLAQDSKqINVQLGDVSLTRFSHGNYG-PEKSFIINLQdC--GTDVSTVDVTFSGTPDGVQSEMLS 101
Cdd:pfam00419   1 INFTGtvTRVPATCKITAGTP-IEVDFGQIPVNELNAGGEGsRQKPFSITLE-CssGSSAVKVTVGLFGTADASSPNLLL 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1314858917 102 IESGTDAASGLAIAILDDAKILIPLNQA--SKDYSLHSG-KVPLTFYAQLRPVNSD-VQSGKVNASATFVLHYD 171
Cdd:pfam00419  79 TGNGAGAATGVGIRLYDANGGALPPNNGtsSIPVSATAAvATGITFTASLVATTGGtPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
3-171 7.15e-42

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 137.86  E-value: 7.15e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917   3 KRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRF-SHGNYGPEKSFIINLQDCGTDV 81
Cdd:COG3539     2 KKLLLALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLnGVGSTSGPKPFSIKLTNCDAGT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  82 S-TVDVTFSGTPDGVQSEMLSIeSGTDAASGLAIAILDDAKILIPLNQASKDYSLHS-GKVPLTFYAQLRPVNSDVQSGK 159
Cdd:COG3539    82 SnSVKVTFTGTADSANPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSnGSATLPFYARYVATGATVTAGS 160

                         170
                  ....*....|..
gi 1314858917 160 VNASATFVLHYD 171
Cdd:COG3539   161 FNATATFTIDYQ 172
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 22-171 1.71e-29

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 106.34  E-value: 1.71e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  22 AHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSH-GNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEML 100
Cdd:PRK15191   20 AHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRaGDGSAWQPFAIDLQNCGSTASGVTVSFSGAADSRNTDLL 99

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1314858917 101 SIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVP--LTFYAQLRPVNSDVQSGKVNASATFVLHYD 171
Cdd:PRK15191  100 ALTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASahLQFYARYLADGGAVTPGDANASATFILAYE 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 2-171 5.10e-22

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 86.95  E-value: 5.10e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917   2 LKRIIWILFLLGLTWGCELFAH--DGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSH-GNYGPEKSFIINLQDCg 78
Cdd:PRK15209    1 MKKVVFALSALALTSTSVFAAEsgDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAiGDKSSAKPFQIKLEDC- 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  79 tDVST---VDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDV 155
Cdd:PRK15209   80 -DITTnkkVNVSFNGVGDADDSTLVSVSTEAGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTVLYFTANYVSTKDTV 158

                         170
                  ....*....|....*.
gi 1314858917 156 QSGKVNASATFVLHYD 171
Cdd:PRK15209  159 TTGYGNAEVDFNLSYE 174
PRK15210 PRK15210
fimbrial protein;
1-170 7.73e-16

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 71.27  E-value: 7.73e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917   1 MLKRIIWILFLLGLTWGCELFAHD----------GTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPE-KS 69
Cdd:PRK15210    1 MRNKIILAMAAAGMMYGASVFAADttptagpfgsGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTEsKP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  70 FIINLQDCGTD------------VSTVDVTFSGTPDgvQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKD--YSL 135
Cdd:PRK15210   81 FTIHLQNCAFDpnipdtagsagkMSKVTVSFSGTAN--TSKKAYTTSGSAQHVGVQLLKSDNTSIIEPNTPMPDGdaQQL 158

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1314858917 136 HSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHY 170
Cdd:PRK15210  159 QAGNNELNFFARLIALDNGVTPGDFNASVTYTLKY 193
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 22-171 2.57e-15

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 69.74  E-value: 2.57e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  22 AHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRfSHGNYGPEKSFIINLQDCGTDV-STVDVTFSGTPDGVQSEML 100
Cdd:PRK15300   26 AKDGTVHITGLIKQNACTVKTDSVEVTLQEEFASLFT-AAGQTAGDTDFTIELENCDANVySSVQARFEGTLDGTDATIL 104

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1314858917 101 SIEsgtDAASGLAIAILDDAKILIPLN--QA-SKDYSLHSGK----VPLTFYAQLRPVNSDVQSGKVNASATFVLHYD 171
Cdd:PRK15300  105 KNE---DDAENIGVQILDKTSTPMTFNdlQAwSAAVALPTAEgvteLSMPFTARYIATAVPVKSGTVDATATFYLQYN 179
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
25-171 1.55e-14

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 67.67  E-value: 1.55e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  25 GTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSH-GNYGPEKSFIINLQDCGTDVS-TVDVTFSGTPDGVQSEMLSI 102
Cdd:PRK15194   33 GTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAvGNTTALIPFTIQLNDCDPVVAaTAAVAFSGQADATNDNLLAV 112

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1314858917 103 ESGTDA--ASGLAIAILDD-AKILIPL-NQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD 171
Cdd:PRK15194  113 ASSTNTttATGVGIEILDNtSSILKPDgATFSANQNLIEGTNTLHFSARYKATGTSASAGQANADATFIMKYE 185
Fimbrial pfam00419
Fimbrial protein;
27-171 6.60e-14

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 65.15  E-value: 6.60e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  27 VNISG--SFRRNTCVLAQDSKqINVQLGDVSLTRFSHGNYG-PEKSFIINLQdC--GTDVSTVDVTFSGTPDGVQSEMLS 101
Cdd:pfam00419   1 INFTGtvTRVPATCKITAGTP-IEVDFGQIPVNELNAGGEGsRQKPFSITLE-CssGSSAVKVTVGLFGTADASSPNLLL 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1314858917 102 IESGTDAASGLAIAILDDAKILIPLNQA--SKDYSLHSG-KVPLTFYAQLRPVNSD-VQSGKVNASATFVLHYD 171
Cdd:pfam00419  79 TGNGAGAATGVGIRLYDANGGALPPNNGtsSIPVSATAAvATGITFTASLVATTGGtPTAGDFNATATIVVDYQ 152
PRK09934 PRK09934
fimbriae assembly protein;
25-171 3.37e-13

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 63.76  E-value: 3.37e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  25 GTVNIS--GSFRRNTCVLAQDSKQINVQLGDVSLTRFSH-GNYGPEKSFIINLQDCGTdvSTVDVTFSGTPdGVQSEMLS 101
Cdd:PRK09934   25 GEINIElhGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNaGDTTQPVPFSLKLEGCPP--GSASITFTGTP-ASDTNLLA 101

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1314858917 102 IESgTDAASGLAIAILDDAKILIPLNQASKDYSLHS-GKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD 171
Cdd:PRK09934  102 LDD-PAMAQTVAIEIRDSDRSRLALGQASPTVEVDAnGNATLNFYANYIALADGVQPGVAKADATFMINYN 171
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 9-171 1.80e-11

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 59.32  E-value: 1.80e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917   9 LFLLGLTWGCELFAH--DGTVNI--SGSFRRNTCVLAQDSKQINVQLGDVSLTRF-SHGNYGPEKSFIINLQDCGTDVST 83
Cdd:PRK15190    8 LFAMGLMLCPQINASadDLAYNLefTGTIVAQTCDIDISSLSQSIDLGQFAVGDFpSTGTTTKFKPFNINLKNCSRGIAG 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  84 VDVTFSGTPDGVQSEMLSIE-----SGTDAASGLAIAILDDAKILIPLNQA-SKDYSLHSGKVPLTFYAQLRPVNSDVQS 157
Cdd:PRK15190   88 AKIWFTGEPDPDNPALLAITdtgmgSGNMLASGVGVEILNDDQDTISINNAdSVVYPLKAGRNTLSFYIRYKSTRPTVTS 167

                         170
                  ....*....|....
gi 1314858917 158 GKVNASATFVLHYD 171
Cdd:PRK15190  168 GNATAVMYFDMQYE 181
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
11-170 2.55e-11

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 59.10  E-value: 2.55e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  11 LLGLTWGCELFAH-----DGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSH-GNYGPEK-SFIINLQDCGTDVS- 82
Cdd:PRK15200    8 LVGLVLMSPVIAQpvmveSGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGpGSFAPVSvPFSLRLISCSAEVWr 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  83 TVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYS-LHSGKVPLTFYAQLRPVNSDVQSGKVN 161
Cdd:PRK15200   88 HVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYApILTSEMTLHFTARYRAISENMTPGRIH 167


                  ....*....
gi 1314858917 162 ASATFVLHY 170
Cdd:PRK15200  168 SEVWFTLVY 176
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 3-171 8.59e-11

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 57.55  E-value: 8.59e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917   3 KRIIWILFLLGLTWGCELFAHD----GTVNISGSFRRNTCVLAQDSkqINVQLGDVSLTR-FSHGNYGPEKSFIINLQDC 77
Cdd:PRK15205    4 KRALLPLALLLLTASGMAAPTDlgpaGDIHFTITIKAKACELEKDS--LEVDMGTMVLQKpVKVGTELNQKNFSIGLKDC 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  78 gTDVSTVDVTFSGTPDGVQSEMLSIESGtdAASGLAIAILDDAKI-LIPLNQASK--DYSLH-SGKVPLTFYAQLRPVNS 153
Cdd:PRK15205   82 -DGISKASVTMDGSPDPDDPSLFALDAG--GATGVALKIKTSKGTqQYPKSTDGTpvEWAINgDGTTQLNYIASYVPVNA 158

                         170
                  ....*....|....*...
gi 1314858917 154 DVQSGKVNASATFVLHYD 171
Cdd:PRK15205  159 DATVGTANATVNFSVTYE 176
lpfA PRK15289
fimbrial protein; Provisional
 20-170 1.55e-09

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 54.19  E-value: 1.55e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  20 LFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSH-GNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSE 98
Cdd:PRK15289   21 ALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGvGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDG 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  99 MLSIESGTD--------------AASGLAIAIL---DDAKILIPLNQASKDYSlHSGKVPLTFYAQLRPVNSDVQSGKVN 161
Cdd:PRK15289  101 DLKVGTPLTagnpgdftgtgqaiAATGVGIRIFnqsDNSQVKLYNDSAYTAID-AEGKAEMKFIARYVATNATVTAGTAN 179


                  ....*....
gi 1314858917 162 ASATFVLHY 170
Cdd:PRK15289  180 ADSQFTVEY 188
PRK09733 PRK09733
fimbrial-like protein;
1-170 1.61e-08

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 51.49  E-value: 1.61e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917   1 MLKRIIWILFLLGLTWGCeLFAHDGT--VNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPEKSFIINLQDC- 77
Cdd:PRK09733    1 AFKKSLLVAGVAMILSNN-VFADEGHgiVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCm 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  78 ----GTDVSTVDVTF-SGTPDGVQSEML--SIESGTDAASGLAIAILDDAKILIPLNQA-SKDYSLHSGKVPLTFYAQLR 149
Cdd:PRK09733   80 lsqgGTTYSKAKVTFtTANTMTGQSDLLknTKETEIGGATGVGVRILDSQSGEVTLGTPvVITFNNTNSYQELNFKARME 159

                         170       180
                  ....*....|....*....|.
gi 1314858917 150 PVNSDVQSGKVNASATFVLHY 170
Cdd:PRK09733  160 SPSKDATPGNVYAQADYKIAY 180
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 25-170 2.89e-06

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 45.19  E-value: 2.89e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  25 GTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNY--GPEKSFIINLQDCGTDVS-TVDVTFSGTPDGVQSEMLS 101
Cdd:PRK15187   32 GTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMvaNQKEDFTIKLEDCDTQTSqNAAVIFNGQQDANQPGSLA 111

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1314858917 102 IESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGK--VPLTFYaqlRPVNSDVQSGKVNASATFVLHY 170
Cdd:PRK15187  112 NTAGAGSATNVALQLYGPDGQALNIGESSSTVTLNDGEnvIPLSVD---YIATGTATAGNVTATATFSMVY 179
PRK15307 PRK15307
major fimbrial protein StkA; Provisional
 1-171 5.97e-03

major fimbrial protein StkA; Provisional


Pssm-ID: 185207  Cd Length: 201  Bit Score: 35.79  E-value: 5.97e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917   1 MLKRIIWILFLLGLTWGCELFAHD---GTVNISGSFRRNTCVLA------QDSKQINVQLGDVSLTRFSHG---NYG-PE 67
Cdd:PRK15307    2 FLKKYGLAAAVAMTLSASSAMAADpdtGTITFHGLVTNNTCNISldnkidQDGNDFDITLPTVFVKDFATAlgvNSTlGE 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314858917  68 KSFIINLQDC-GTDVSTVDVTFSGTPDGVQSEMLSIESGTD---AASGLAIAILDDA-------KILIPLNQASKDySLH 136
Cdd:PRK15307   82 KQFTLNLSECdNATLKDASAQFNSWGGSSATSGGLLVPPANlqgSATNVNLVLANNGntatdliKIDQPNNTQKAT-IST 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1314858917 137 SGKVPLTF---YAQLRPVNSD---VQSGKVNASATFVLHYD 171
Cdd:PRK15307  161 DGTGDLFYrvaYTQGQKWNADtspVTSGTVQAQVAFTMIYN 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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