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Conserved domains on  [gi|1314860944|gb|AUG17758|]
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fimbrial protein [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

fimbrial-like protein( domain architecture ID 10013327)

fimbrial-like protein similar to Escherichia coli fimbrial-like protein YgiL

Gene Ontology:  GO:0043709

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09733 PRK09733
fimbrial-like protein;
3-183 2.30e-117

fimbrial-like protein;


:

Pssm-ID: 182053  Cd Length: 181  Bit Score: 329.99  E-value: 2.30e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   3 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 82
Cdd:PRK09733    1 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  83 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 162
Cdd:PRK09733   81 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 160

                         170       180
                  ....*....|....*....|.
gi 1314860944 163 PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK09733  161 PSKDATPGNVYAQADYKIAYE 181
 
Name Accession Description Interval E-value
PRK09733 PRK09733
fimbrial-like protein;
3-183 2.30e-117

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 329.99  E-value: 2.30e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   3 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 82
Cdd:PRK09733    1 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  83 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 162
Cdd:PRK09733   81 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 160

                         170       180
                  ....*....|....*....|.
gi 1314860944 163 PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK09733  161 PSKDATPGNVYAQADYKIAYE 181
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
5-183 7.42e-39

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 130.54  E-value: 7.42e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   5 KKSLLVAGVAMILSNNVfADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSD-QKSLAEPFTIHLQDCmls 83
Cdd:COG3539     2 KKLLLALLLALALSAAA-AAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVgSTSGPKPFSIKLTNC--- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  84 qGGTTYSKAKVTFTtANTMTGQSDLLKNTketEIGGATGVGVRILDSQSGEVTLGTPV-VITFNNTNSYQeLNFKARMES 162
Cdd:COG3539    78 -DAGTSNSVKVTFT-GTADSANPGLLANT---GSGGASGVGIQLLDSDGTPIPLGTPSsAVTLTSNGSAT-LPFYARYVA 151

                         170       180
                  ....*....|....*....|.
gi 1314860944 163 PSKDATPGNVYAQADYKIAYE 183
Cdd:COG3539   152 TGATVTAGSFNATATFTIDYQ 172
Fimbrial pfam00419
Fimbrial protein;
30-183 4.21e-13

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 63.61  E-value: 4.21e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  30 VKFKGEVIS--APCSIKPGDEDlTVNLGEVADTVLKSDQKSLAE-PFTIHLQdCmlsQGGTTYSKAKVTFTTaNTMTGQS 106
Cdd:pfam00419   1 INFTGTVTRvpATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQkPFSITLE-C---SSGSSAVKVTVGLFG-TADASSP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944 107 DLLKNTKETeiGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQE--LNFKARMESPSKDA-TPGNVYAQADYKIAYE 183
Cdd:pfam00419  75 NLLLTGNGA--GAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVAtgITFTASLVATTGGTpTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
PRK09733 PRK09733
fimbrial-like protein;
3-183 2.30e-117

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 329.99  E-value: 2.30e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   3 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 82
Cdd:PRK09733    1 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  83 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 162
Cdd:PRK09733   81 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 160

                         170       180
                  ....*....|....*....|.
gi 1314860944 163 PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK09733  161 PSKDATPGNVYAQADYKIAYE 181
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
5-183 7.42e-39

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 130.54  E-value: 7.42e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   5 KKSLLVAGVAMILSNNVfADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSD-QKSLAEPFTIHLQDCmls 83
Cdd:COG3539     2 KKLLLALLLALALSAAA-AAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVgSTSGPKPFSIKLTNC--- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  84 qGGTTYSKAKVTFTtANTMTGQSDLLKNTketEIGGATGVGVRILDSQSGEVTLGTPV-VITFNNTNSYQeLNFKARMES 162
Cdd:COG3539    78 -DAGTSNSVKVTFT-GTADSANPGLLANT---GSGGASGVGIQLLDSDGTPIPLGTPSsAVTLTSNGSAT-LPFYARYVA 151

                         170       180
                  ....*....|....*....|.
gi 1314860944 163 PSKDATPGNVYAQADYKIAYE 183
Cdd:COG3539   152 TGATVTAGSFNATATFTIDYQ 172
PRK15210 PRK15210
fimbrial protein;
8-182 5.70e-19

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 80.13  E-value: 5.70e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   8 LLVAGVAMILSNNVFADE--------GHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKS-DQKSLAEPFTIHLQ 78
Cdd:PRK15210    7 LAMAAAGMMYGASVFAADttptagpfGSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTaDATTESKPFTIHLQ 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  79 DCMLSQGGTT-------YSKAKVTFTTANTMTGQSdllkntkETEIGGATGVGVRILDSQSGE-VTLGTPV-------VI 143
Cdd:PRK15210   87 NCAFDPNIPDtagsagkMSKVTVSFSGTANTSKKA-------YTTSGSAQHVGVQLLKSDNTSiIEPNTPMpdgdaqqLQ 159

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1314860944 144 TFNNtnsyqELNFKARMESPSKDATPGNVYAQADYKIAY 182
Cdd:PRK15210  160 AGNN-----ELNFFARLIALDNGVTPGDFNASVTYTLKY 193
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 5-183 8.03e-18

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 76.55  E-value: 8.03e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   5 KKSLLVAGVAMILSNNVFA-DEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKS-DQKSLAEPFTIHLQDCML 82
Cdd:PRK15209    2 KKVVFALSALALTSTSVFAaESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAiGDKSSAKPFQIKLEDCDI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  83 sqggTTYSKAKVTFTTANTmTGQSDLLknTKETEIGGATGVGVRILDSQSGEVTLGT---PVVITFNNTNSYqelnFKAR 159
Cdd:PRK15209   82 ----TTNKKVNVSFNGVGD-ADDSTLV--SVSTEAGAATGVGIGIYDNANTLVELNTgksTTTLAAGQTVLY----FTAN 150

                         170       180
                  ....*....|....*....|....
gi 1314860944 160 MESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15209  151 YVSTKDTVTTGYGNAEVDFNLSYE 174
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-183 2.47e-16

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 72.68  E-value: 2.47e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   1 MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEV-ADTVLKSDQKSLAEPFTIHLQD 79
Cdd:PRK15194    6 ISSAIASLLFVAGAAYAADPTPVSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYrTAIFTAVGNTTALIPFTIQLND 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  80 CmlsqggttysKAKVTFTTANTMTGQSD-----LLKNTKETEIGGATGVGVRILDSQSGEVtlgTPVVITFNNTNSYQE- 153
Cdd:PRK15194   86 C----------DPVVAATAAVAFSGQADatndnLLAVASSTNTTTATGVGIEILDNTSSIL---KPDGATFSANQNLIEg 152

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1314860944 154 ---LNFKARMESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15194  153 tntLHFSARYKATGTSASAGQANADATFIMKYE 185
Fimbrial pfam00419
Fimbrial protein;
30-183 4.21e-13

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 63.61  E-value: 4.21e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  30 VKFKGEVIS--APCSIKPGDEDlTVNLGEVADTVLKSDQKSLAE-PFTIHLQdCmlsQGGTTYSKAKVTFTTaNTMTGQS 106
Cdd:pfam00419   1 INFTGTVTRvpATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQkPFSITLE-C---SSGSSAVKVTVGLFG-TADASSP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944 107 DLLKNTKETeiGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQE--LNFKARMESPSKDA-TPGNVYAQADYKIAYE 183
Cdd:pfam00419  75 NLLLTGNGA--GAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVAtgITFTASLVATTGGTpTAGDFNATATIVVDYQ 152
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 28-183 1.52e-10

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 57.17  E-value: 1.52e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  28 GIVKFKGEVISAPCSIKpgDEDLTVNLGEVadtVLKSDQKSLAE----PFTIHLQDCmlsqggTTYSKAKVTfttantMT 103
Cdd:PRK15205   30 GDIHFTITIKAKACELE--KDSLEVDMGTM---VLQKPVKVGTElnqkNFSIGLKDC------DGISKASVT------MD 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944 104 GQSDLLKNTK-ETEIGGATGVGVRILDS----QSGEVTLGTPVVITFNNTNSYQeLNFKARMESPSKDATPGNVYAQADY 178
Cdd:PRK15205   93 GSPDPDDPSLfALDAGGATGVALKIKTSkgtqQYPKSTDGTPVEWAINGDGTTQ-LNYIASYVPVNADATVGTANATVNF 171


                  ....*
gi 1314860944 179 KIAYE 183
Cdd:PRK15205  172 SVTYE 176
lpfA PRK15289
fimbrial protein; Provisional
 5-183 2.26e-10

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 56.89  E-value: 2.26e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   5 KKSLLVAGVAM---ILSNNVFADEGhgIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLkSDQKSLAEP--FTIHLQD 79
Cdd:PRK15289    2 KRNIIGGAFTLaslMLAGHALAEDG--VVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAF-SGVGSLASPqkFSIKLEN 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  80 CmlsqgGTTYSKAKVTFTTANTMTGQSDLLKNTKET-----------EIGGATGVGVRILD-SQSGEVTLGTPVVITFNN 147
Cdd:PRK15289   79 C-----PATYTQAAVRFDGTEAPGGDGDLKVGTPLTagnpgdftgtgQAIAATGVGIRIFNqSDNSQVKLYNDSAYTAID 153

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1314860944 148 TNSYQELNFKARMESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15289  154 AEGKAEMKFIARYVATNATVTAGTANADSQFTVEYK 189
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 6-183 4.86e-10

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 55.88  E-value: 4.86e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   6 KSLLVAGVAMILSNNvfADEGH-GIVKFKGEVISAPCSIKPGDEDLTVNLGEVAD-TVLKSDQKSLAEPFTIHLQDCmls 83
Cdd:PRK15191    2 RNDILYGIGMLLAAS--GVQAHdGRVYVSGTITDNTCSLSPGSENINVAMGAVSQrQFYRAGDGSAWQPFAIDLQNC--- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  84 qgGTTYSKAKVTFTTANTMTGQSDLLKNTKETEiggATGVGVRILDSQSGEVTLGTPV-VITFNNTNSYQELNFKARMES 162
Cdd:PRK15191   77 --GSTASGVTVSFSGAADSRNTDLLALTAGESD---ASGIGIALYDQNKTLIPLGQESdVVTLSPGQASAHLQFYARYLA 151

                         170       180
                  ....*....|....*....|.
gi 1314860944 163 PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15191  152 DGGAVTPGDANASATFILAYE 172
PRK15296 PRK15296
fimbrial protein SthA;
5-183 1.41e-08

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 52.02  E-value: 1.41e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   5 KKSLLVAGVAMILSNNVFAdegHGIVKFKGEVISAPCSIK-PGDEDLTVNLGE-VADTVLKSDQKSLAEPFTIHLQDCML 82
Cdd:PRK15296    4 KKIIILAMLTAVASTPVFA---QNTITFNGKIYDQACTVQvNGSTDTTIDLGNySKERIAEKGATTDYVPFTVSLVSCPE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  83 SQGGTTySKAKVTFTTAnTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGT-PVVITFNNTNSYQELNFKARME 161
Cdd:PRK15296   81 AGTGVP-TQAMFRFHGA-TDDSNPTYFKNADEGSETGAAGVGISIQNASHSDVTDNTdDAAVNLPTDGSTADFTYYAAMA 158

                         170       180
                  ....*....|....*....|...
gi 1314860944 162 SP-SKDATPGNVYAQADYKIAYE 183
Cdd:PRK15296  159 NDgSATVTGGDVSTQVTYTVSYQ 181
PRK15261 PRK15261
fimbrial protein SteA; Provisional
 2-182 6.48e-07

fimbrial protein SteA; Provisional


Pssm-ID: 185169  Cd Length: 195  Bit Score: 47.46  E-value: 6.48e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   2 SAFKKSLLVAGVAM-ILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLG-EVADTVLKSDQKSL--AEPFTIHL 77
Cdd:PRK15261    4 SHFCKLAVTASLVMgIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGsSIGNGTLSNGKTTInnARTFHIDL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  78 QDCMLSqggtTYSKAKVTFTTAN---TMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLG---TPVVITFNNT--- 148
Cdd:PRK15261   84 EGCTWA----TEKNMNVVFTTGSgttAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGdtyTQAIADLDGDtil 159

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1314860944 149 NSYQELNFKARMESPSKDAT-PGNVYAQADYKIAY 182
Cdd:PRK15261  160 DEKQSLNFTAWLVGAATGTVgTGEFSSAANVTISY 194
PRK15283 PRK15283
fimbrial major subunit StfA;
2-182 7.49e-07

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 47.07  E-value: 7.49e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   2 SAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCM 81
Cdd:PRK15283    3 TAVKAAVAAALVMGVSSFANAAGSNTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMGGKESSKVDFHIGLENCA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  82 LsqggTTYSKAKVTFTT----ANTMTGQSDLLK------NTKETEIGGATGVGVRILDSQSGEVTLGTPVVItfnntnSY 151
Cdd:PRK15283   83 F----TTEKEASTVFSAigneSSANPGSVALMRigggemAGSSIVIGNHLGSAIKLGDAYSENLTMNGSVAA------AK 152

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1314860944 152 QELNFKARMESPSKDAT--PGNVYAQADYKIAY 182
Cdd:PRK15283  153 QTLNFKAWVKGDSAASTidTGEFSSTVNFTISY 185
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 6-182 5.64e-06

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 44.70  E-value: 5.64e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   6 KSLLVAGVAMILSNNVFADEGH-GIVKFKGEVISAPCSIKPGDEDLTVNlGEVADTVLKSDQKSLAEPFTIHLQDCmlsq 84
Cdd:PRK15300    6 KTLTVALAAITLSPAALADTAKdGTVHITGLIKQNACTVKTDSVEVTLQ-EEFASLFTAAGQTAGDTDFTIELENC---- 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  85 GGTTYSKAKVTFTtaNTMTG-QSDLLKNTketeiGGATGVGVRILDSQSGEVTL------GTPVVITFNNTNSYQELNFK 157
Cdd:PRK15300   81 DANVYSSVQARFE--GTLDGtDATILKNE-----DDAENIGVQILDKTSTPMTFndlqawSAAVALPTAEGVTELSMPFT 153

                         170       180
                  ....*....|....*....|....*
gi 1314860944 158 ARMESPSKDATPGNVYAQADYKIAY 182
Cdd:PRK15300  154 ARYIATAVPVKSGTVDATATFYLQY 178
PRK09934 PRK09934
fimbriae assembly protein;
5-182 2.32e-05

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 42.57  E-value: 2.32e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   5 KKSLLVAGVAMILSNNVFADEGHGIV--KFKGEVISAPCSIKPGDEDLTVNLGEVADTVLK-SDQKSLAEPFTIHLQDCm 81
Cdd:PRK09934    2 RRVFFACFCGLLWSPLSWAADPLGEIniELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLnAGDTTQPVPFSLKLEGC- 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  82 lsqggtTYSKAKVTFTtaNTMTGQSDLLKNTKETEiggATGVGVRILDSQSGEVTLG--TPVVITFNNTNSyqELNFKAR 159
Cdd:PRK09934   81 ------PPGSASITFT--GTPASDTNLLALDDPAM---AQTVAIEIRDSDRSRLALGqaSPTVEVDANGNA--TLNFYAN 147

                         170       180
                  ....*....|....*....|...
gi 1314860944 160 MESPSKDATPGNVYAQADYKIAY 182
Cdd:PRK09934  148 YIALADGVQPGVAKADATFMINY 170
PRK15262 PRK15262
putative fimbrial protein StaF; Provisional
 4-183 3.61e-05

putative fimbrial protein StaF; Provisional


Pssm-ID: 237933  Cd Length: 197  Bit Score: 42.37  E-value: 3.61e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   4 FKKSLLVAGVAMILSNNVFADeGHGiVKFKGEVISAPCSIK---PGDEDL-TVNLGEVADTVLKSDQKSLAEPFTIHLQD 79
Cdd:PRK15262    6 MKKIILFLGLLFALTSPPAYA-GQD-VDLTANIKNSTCQSGisnNGNVDLgTVGVGYFADNVTAETYYPGGKEFTITVVD 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  80 CMLSQGGTTYSKAKVTFT--TANTMTGQSDLLKNtkETEIGGATGVGVRILDSQSGEVT---LGT--------PVVITFN 146
Cdd:PRK15262   84 CALQGTGSVLNQLHFDFRpqSGVMATGSQQIFAN--EAVAGGAKNVGVVIFSIQDPANTfnvLNSdgssrsvyPVMTSAL 161

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1314860944 147 NTNSYQelnFKARMES--PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15262  162 NNSSWK---FYARMQKidPALDVTSGQVTSHVLVDVYYE 197
PRK15239 PRK15239
putative fimbrial protein StaA; Provisional
 5-183 1.85e-04

putative fimbrial protein StaA; Provisional


Pssm-ID: 185152  Cd Length: 197  Bit Score: 40.48  E-value: 1.85e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   5 KKSLLVAGVAMIL-SNNVFADEGhGIVKFKGEVISAPC----------SIKPGDEDL-TVNLGEVADTVLKSDQKSLAEP 72
Cdd:PRK15239    2 KKVLLATAVFMALgSSSVMAVEG-GRINFEGLVSAETCkkvvssavgnSNIDGTVTLkTAHVSDVTAEVQNSTAGVNAED 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  73 FTIHLqDCmlSQGGTTYSKAKVTFTTA-NTMTGQSDLLKNTKETEIGGATGVGVRILD----SQSGEVTLGTPVVITFNN 147
Cdd:PRK15239   81 FSIII-DC--SDAGAGLVKSHLTMSSSfSNTKGTLDNDETLTRSGIEAAKAVDIAVHHvddaNALSLVKINDPSNTMEES 157

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1314860944 148 -TNSYQELNFKA---RMESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15239  158 fTNGIATYNFKAsyvKSSDAGASVTTGLVSTNAIYTFTYE 197
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
5-182 1.86e-04

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 40.22  E-value: 1.86e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   5 KKSLLVAGVAM---ILSNNVFADEGHgiVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLkSDQKSLAE---PFTIHLQ 78
Cdd:PRK15200    3 RKGAALVGLVLmspVIAQPVMVESGR--VHLRGQLVNGGCAVATESQDLRVLMGQYRTNAF-TGPGSFAPvsvPFSLRLI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  79 DCmlsqGGTTYSKAKVTFTTAnTMTGQSDLLKNTKETEigGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKA 158
Cdd:PRK15200   80 SC----SAEVWRHVGIAFAGV-TPAEDPHVFLASGEGI--GNAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHFTA 152

                         170       180
                  ....*....|....*....|....
gi 1314860944 159 RMESPSKDATPGNVYAQADYKIAY 182
Cdd:PRK15200  153 RYRAISENMTPGRIHSEVWFTLVY 176
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 1-183 2.94e-04

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 39.68  E-value: 2.94e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944   1 MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLA-EPFTIHLQD 79
Cdd:PRK15190    1 MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKfKPFNINLKN 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  80 CMLSQGGttyskAKVTFTtantmtGQSD----LLKNTKETEIGG----ATGVGVRILDSQSGEVTLGTPVVITFNNTNSY 151
Cdd:PRK15190   81 CSRGIAG-----AKIWFT------GEPDpdnpALLAITDTGMGSgnmlASGVGVEILNDDQDTISINNADSVVYPLKAGR 149

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1314860944 152 QELNFKARMESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15190  150 NTLSFYIRYKSTRPTVTSGNATAVMYFDMQYE 181
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 28-182 1.51e-03

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 37.88  E-value: 1.51e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944  28 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLK-----SDQKslaEPFTIHLQDCmlsqgGTTYSKAKVTFTTANTM 102
Cdd:PRK15187   32 GTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTeagmvANQK---EDFTIKLEDC-----DTQTSQNAAVIFNGQQD 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314860944 103 TGQSDLLKNTKETeiGGATGVGVRILDSQSGEVTLG-TPVVITFNNTNSYQELNFKArmeSPSKDATPGNVYAQADYKIA 181
Cdd:PRK15187  104 ANQPGSLANTAGA--GSATNVALQLYGPDGQALNIGeSSSTVTLNDGENVIPLSVDY---IATGTATAGNVTATATFSMV 178


                  .
gi 1314860944 182 Y 182
Cdd:PRK15187  179 Y 179
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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