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Conserved domains on  [gi|1314861631|gb|AUG18445|]
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ATP synthase subunit gamma [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

FoF1 ATP synthase subunit gamma( domain architecture ID 10792582)

FoF1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

EC:  7.1.2.2
Gene Ontology:  GO:0045261|GO:0005524|GO:0046933|GO:0042777
PubMed:  25730883|30888962|25667968|18216260|8951091
SCOP:  4000503

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 1.71e-176

F0F1 ATP synthase subunit gamma; Validated


:

Pssm-ID: 235535  Cd Length: 284  Bit Score: 488.08  E-value: 1.71e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNlEYKHPYLEDRDVKRVGYLV 80
Cdd:PRK05621    1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  81 VSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:PRK05621   80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 161 DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDlkHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:PRK05621  160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEE--ETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1314861631 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:PRK05621  238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 1.71e-176

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 488.08  E-value: 1.71e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNlEYKHPYLEDRDVKRVGYLV 80
Cdd:PRK05621    1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  81 VSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:PRK05621   80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 161 DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDlkHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:PRK05621  160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEE--ETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1314861631 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:PRK05621  238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-287 2.51e-166

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 462.31  E-value: 2.51e-166
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLV 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  81 VSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:COG0224    81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 161 DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKS-WDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASE 239
Cdd:COG0224   161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETrADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1314861631 240 QAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:COG0224   241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-287 2.66e-154

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 432.10  E-value: 2.66e-154
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   2 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  82 STDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYD 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 162 EGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQA 241
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1314861631 242 ARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
ATP-synt pfam00231
ATP synthase;
5-286 8.93e-150

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 420.39  E-value: 8.93e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   5 KEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTD 84
Cdd:pfam00231   3 KEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVITSD 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  85 RGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGM-GDNPSLSELIGPVKVMLQAYDEG 163
Cdd:pfam00231  83 RGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSlGDKPTFEEAAEIADELLDAFLAG 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 164 RLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAAR 243
Cdd:pfam00231 163 EIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAAR 242

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1314861631 244 MVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAA 286
Cdd:pfam00231 243 MTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-284 1.10e-128

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 366.90  E-value: 1.10e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   2 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVV 81
Cdd:cd12151     1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  82 STDRGLCGGLNINLFKKLLAEMKtwTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYD 161
Cdd:cd12151    81 TSDRGLCGGFNSNIIKAAEELIK--EADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 162 EGRLDKLYIVSNKFINTMSQVPTISQLLPL-PASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:cd12151   159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLdKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1314861631 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGA 284
Cdd:cd12151   239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 1.71e-176

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 488.08  E-value: 1.71e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNlEYKHPYLEDRDVKRVGYLV 80
Cdd:PRK05621    1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  81 VSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:PRK05621   80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 161 DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDlkHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:PRK05621  160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEE--ETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1314861631 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:PRK05621  238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-287 2.51e-166

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 462.31  E-value: 2.51e-166
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLV 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  81 VSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:COG0224    81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 161 DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKS-WDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASE 239
Cdd:COG0224   161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETrADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1314861631 240 QAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:COG0224   241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-287 2.66e-154

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 432.10  E-value: 2.66e-154
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   2 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  82 STDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYD 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 162 EGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQA 241
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1314861631 242 ARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
ATP-synt pfam00231
ATP synthase;
5-286 8.93e-150

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 420.39  E-value: 8.93e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   5 KEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTD 84
Cdd:pfam00231   3 KEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVITSD 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  85 RGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGM-GDNPSLSELIGPVKVMLQAYDEG 163
Cdd:pfam00231  83 RGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSlGDKPTFEEAAEIADELLDAFLAG 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 164 RLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAAR 243
Cdd:pfam00231 163 EIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAAR 242

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1314861631 244 MVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAA 286
Cdd:pfam00231 243 MTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-284 1.10e-128

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 366.90  E-value: 1.10e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   2 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVV 81
Cdd:cd12151     1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  82 STDRGLCGGLNINLFKKLLAEMKtwTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYD 161
Cdd:cd12151    81 TSDRGLCGGFNSNIIKAAEELIK--EADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 162 EGRLDKLYIVSNKFINTMSQVPTISQLLPL-PASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:cd12151   159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLdKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1314861631 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGA 284
Cdd:cd12151   239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-287 5.42e-99

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 292.08  E-value: 5.42e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLA--HGNLEYKHPYLEDR-DVKRVG 77
Cdd:PRK14111    1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTarTVGAARVGPLLEKRpTVKRVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  78 YLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVML 157
Cdd:PRK14111   81 LILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 158 QAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKswDYLYEPDPKALLDTLLRRYVESQVYQGVVENLA 237
Cdd:PRK14111  161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPPEISTTTVV--DYTYEPSPEEVLRALLPRFVEVQLYQAVLESIA 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1314861631 238 SEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:PRK14111  239 SEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAAL 288
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-287 2.21e-93

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 277.71  E-value: 2.21e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLV 80
Cdd:PRK13423    1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHPLLVPREVKKALLVV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  81 VSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLS--ELIGpvKVMLQ 158
Cdd:PRK13423   81 VTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYEtaALLA--QELIE 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 159 AYDEGRLDKLYIVSNKFINTMSQVPTISQLLPL--PASDDDDlkhKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENL 236
Cdd:PRK13423  159 GYLAGEYDEVYLVYNEFKSVMSQDITVQQLLPIdpPEAADDE---YLPEYIYEPSRDALLAELLPKHVEVQIYRALLESV 235

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1314861631 237 ASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:PRK13423  236 ASEHGARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEAL 286
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-287 1.44e-85

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 258.06  E-value: 1.44e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLV 80
Cdd:PRK13422    1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASIDYPNPYLFDRDVKRVGYIV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  81 VSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGG-NVV--AQVTGMGDNPSLSELIGPVKVML 157
Cdd:PRK13422   81 TSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFAKLKDvNIVatAHYNDKDKEGSIRAIGGAVKVML 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 158 QAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLP--------ASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVY 229
Cdd:PRK13422  161 DKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQdifsaeeiKANKEKATKGHWDYIYERDIEEVLNALCIRYIEAQVR 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1314861631 230 QGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:PRK13422  241 GAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-287 2.65e-78

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 239.46  E-value: 2.65e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRD-VKRVGYL 79
Cdd:PRK13427    1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHSPYLRRPEkIRTVALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  80 VVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQA 159
Cdd:PRK13427   81 IITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFMER 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 160 YDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASE 239
Cdd:PRK13427  161 FANESVDAVEIASTVYYSAASQKPETTRVLPLEPPTAAAEGSVQDDVVYEPSPEAILESLLPLVVKTAFLKAILEANASE 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1314861631 240 QAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:PRK13427  241 QIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADAL 288
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-286 1.64e-72

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 224.62  E-value: 1.64e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRD-VKRVGYL 79
Cdd:PRK13424    1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAHPLLEVREeIKTCGIV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  80 VVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVV-AQVTGMGD-NPSLSELIGpvKVML 157
Cdd:PRK13424   81 LITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEIVtAYADQMTSfDFQLANSIG--LEVI 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 158 QAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPL-PASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENL 236
Cdd:PRK13424  159 DGYLTGELDEVVLVYGEFVSMARQLPITLQILPIaPEEAEEEEAGASSEYIYEPSVEGLLAELLPRFIKVQIYRGLLDTS 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1314861631 237 ASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAA 286
Cdd:PRK13424  239 ASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEA 288
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 5-287 2.82e-69

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 216.17  E-value: 2.82e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   5 KEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTD 84
Cdd:PRK14110    7 RDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDRESHPLLERREEKNVDLVIITAD 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  85 RGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVA---QVTGMGDNPSLSELIGpvKVMLQAYD 161
Cdd:PRK14110   87 RGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIIKsyeDVFRKEINFSVVKEVG--GILASRYI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 162 EGRLDKLYIVSNKFINTMSQVPTISQLLPL-PASDDDDLKHKSwDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:PRK14110  165 EEETDAVYLINNEMITRATYKPKVRKFLPFeVEAQEKKLDELS-VYNIEVSEEEFLDKLLQLYLNYQLYRALVESNAAEH 243

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1314861631 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:PRK14110  244 FARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAM 290
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-287 3.19e-66

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 208.51  E-value: 3.19e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDR-DVKRVGYL 79
Cdd:PRK13425    1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKVDTSLNPLLSPRsEVNKVLVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  80 VVSTDRGLCGGLNINLFK---KLLAEmkTWTDKGVQCDLAMI--GSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVK 154
Cdd:PRK13425   81 LITSDRGLCGAFNTNIIKlaqKVIHE--DYAALHAKGGVSMIcaGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEIAE 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 155 VMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDlkHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVE 234
Cdd:PRK13425  159 TASGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEKPGA--EGGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLE 236

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1314861631 235 NLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287
Cdd:PRK13425  237 SNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADAL 289
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-286 8.03e-65

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 205.01  E-value: 8.03e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLV 80
Cdd:PRK13426    1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLDVESPFTVERPVKRVAIVV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631  81 VSTDRGLCGGLNINLFKKLLA---EMKTWTDKGVQcdLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVML 157
Cdd:PRK13426   81 FSSNTSLCGGFNANIIKLLLQtigEYRTLGQDNIL--IYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLM 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314861631 158 QAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHK---SWDYLYEPDPKALLDTLLRRYVESQVYQGVVE 234
Cdd:PRK13426  159 ELFLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDLSQEKNAEHAggvANDYIIEPSADTVLNDLIPKLLSLKIYTALLD 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1314861631 235 NLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAA 286
Cdd:PRK13426  239 SNASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMA 290
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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