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Conserved domains on  [gi|1314861917|gb|AUG18731|]
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envelope stress response protein PspG [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

envelope stress response protein PspG( domain architecture ID 10560160)

envelope stress response protein PspG is an effector of the phage shock response

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Phageshock_PspG pfam09583
Phage shock protein G (Phageshock_PspG); This protein was previously designated as YjbO in ...
 1-63 1.10e-13

Phage shock protein G (Phageshock_PspG); This protein was previously designated as YjbO in Escherichia coli. It is found only in genomes that have the phage shock operon (psp), but it is only rarely encoded near other psp genes. The psp regulon is upregulated in response to a number of stress conditions, including ethanol, expression of the filamentous phage secretin protein IV and other secretins and heat shock.


:

Pssm-ID: 430698  Cd Length: 63  Bit Score: 59.36  E-value: 1.10e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1314861917  1 MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKA 63
Cdd:pfam09583  1 MLELIFVIGFFVMLLLTGISLLGVLAALVVATAVMLLGGMFALVIKLLPWLLVAVVAVWFIRA 63
 
Name Accession Description Interval E-value
Phageshock_PspG pfam09583
Phage shock protein G (Phageshock_PspG); This protein was previously designated as YjbO in ...
 1-63 1.10e-13

Phage shock protein G (Phageshock_PspG); This protein was previously designated as YjbO in Escherichia coli. It is found only in genomes that have the phage shock operon (psp), but it is only rarely encoded near other psp genes. The psp regulon is upregulated in response to a number of stress conditions, including ethanol, expression of the filamentous phage secretin protein IV and other secretins and heat shock.


Pssm-ID: 430698  Cd Length: 63  Bit Score: 59.36  E-value: 1.10e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1314861917  1 MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKA 63
Cdd:pfam09583  1 MLELIFVIGFFVMLLLTGISLLGVLAALVVATAVMLLGGMFALVIKLLPWLLVAVVAVWFIRA 63
phageshock_pspG TIGR02975
phage shock protein G; This protein previously was designated yjbO in E. coli. It is found ...
 2-65 9.21e-13

phage shock protein G; This protein previously was designated yjbO in E. coli. It is found only in genomes that have the phage shock operon (psp), but only rarely is encoded near other psp genes. The psp regulon is upregulated in response to a number of stress conditions, including ethanol, expression of the filamentous phage secretin protein IV and other secretins, and heat shock. [Cellular processes, Adaptations to atypical conditions]


Pssm-ID: 132020  Cd Length: 64  Bit Score: 57.04  E-value: 9.21e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1314861917  2 LELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKAIK 65
Cdd:TIGR02975  1 LELIFVLGFFVMLMVTGISLLGVLAALGVAVLFMALGGMFALMIKLLPWLILAVVVVWFIKSVR 64
 
Name Accession Description Interval E-value
Phageshock_PspG pfam09583
Phage shock protein G (Phageshock_PspG); This protein was previously designated as YjbO in ...
 1-63 1.10e-13

Phage shock protein G (Phageshock_PspG); This protein was previously designated as YjbO in Escherichia coli. It is found only in genomes that have the phage shock operon (psp), but it is only rarely encoded near other psp genes. The psp regulon is upregulated in response to a number of stress conditions, including ethanol, expression of the filamentous phage secretin protein IV and other secretins and heat shock.


Pssm-ID: 430698  Cd Length: 63  Bit Score: 59.36  E-value: 1.10e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1314861917  1 MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKA 63
Cdd:pfam09583  1 MLELIFVIGFFVMLLLTGISLLGVLAALVVATAVMLLGGMFALVIKLLPWLLVAVVAVWFIRA 63
phageshock_pspG TIGR02975
phage shock protein G; This protein previously was designated yjbO in E. coli. It is found ...
 2-65 9.21e-13

phage shock protein G; This protein previously was designated yjbO in E. coli. It is found only in genomes that have the phage shock operon (psp), but only rarely is encoded near other psp genes. The psp regulon is upregulated in response to a number of stress conditions, including ethanol, expression of the filamentous phage secretin protein IV and other secretins, and heat shock. [Cellular processes, Adaptations to atypical conditions]


Pssm-ID: 132020  Cd Length: 64  Bit Score: 57.04  E-value: 9.21e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1314861917  2 LELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKAIK 65
Cdd:TIGR02975  1 LELIFVLGFFVMLMVTGISLLGVLAALGVAVLFMALGGMFALMIKLLPWLILAVVVVWFIKSVR 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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