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Conserved domains on  [gi|1352183273|gb|AVI54289|]
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amino acid permease [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

L-methionine/branched-chain amino acid transporter( domain architecture ID 11485148)

L-methionine/branched-chain amino acid transporter facilitates the efflux of L-methionine; can also export L-leucine, L-isoleucine and L-valine

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11021 PRK11021
putative transporter; Provisional
8-411 0e+00

putative transporter; Provisional


:

Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 592.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   8 LGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERV 87
Cdd:PRK11021    1 LGLWQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  88 TGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGD 167
Cdd:PRK11021   81 TGWLFLSVIPVGLPAALQIAAGFGQALFGWSSWQLLLAELLTLALLWLLNLRGASSSANLQTVIALLIVALVVAIWWAGD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 168 IKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGE 247
Cdd:PRK11021  161 IKPADIPFPAPGSIEWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 248 KMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQA-QHNPDHYLARLSSRHIPNNALNAVLGCC 326
Cdd:PRK11021  241 KQAAAASLPGIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQArEGRPPSYLARLSARGVPVNALNAVLGCC 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 327 VVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLL 406
Cdd:PRK11021  321 AVSILLIYALGLNLEALIAYANGIFVLIYLLCMLAACKLLKGRYRPLAVLGCLLCLLLLVMLGWKMLYALIMLALLWLFL 400

                  ....*
gi 1352183273 407 PKRKT 411
Cdd:PRK11021  401 PKRKT 405
 
Name Accession Description Interval E-value
PRK11021 PRK11021
putative transporter; Provisional
8-411 0e+00

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 592.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   8 LGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERV 87
Cdd:PRK11021    1 LGLWQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  88 TGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGD 167
Cdd:PRK11021   81 TGWLFLSVIPVGLPAALQIAAGFGQALFGWSSWQLLLAELLTLALLWLLNLRGASSSANLQTVIALLIVALVVAIWWAGD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 168 IKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGE 247
Cdd:PRK11021  161 IKPADIPFPAPGSIEWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 248 KMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQA-QHNPDHYLARLSSRHIPNNALNAVLGCC 326
Cdd:PRK11021  241 KQAAAASLPGIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQArEGRPPSYLARLSARGVPVNALNAVLGCC 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 327 VVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLL 406
Cdd:PRK11021  321 AVSILLIYALGLNLEALIAYANGIFVLIYLLCMLAACKLLKGRYRPLAVLGCLLCLLLLVMLGWKMLYALIMLALLWLFL 400

                  ....*
gi 1352183273 407 PKRKT 411
Cdd:PRK11021  401 PKRKT 405
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-407 1.42e-51

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 178.94  E-value: 1.42e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   1 MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAF 80
Cdd:COG0531     6 SSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRAL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  81 GSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWhSWQLLLAeLGTLALVWYIGTRGASSSANLQTVIAGLIVALIV 160
Cdd:COG0531    86 GPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPA-GGSVLIA-LVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 161 AIWWAG--DIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVV 238
Cdd:COG0531   164 LFIVVGlfAFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLA 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 239 VLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNP-DHYLARLSSRHipNN 317
Cdd:COG0531   244 LTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLlPKVFAKVHPRF--GT 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 318 ALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKL------LQGRYRLLAVVGGLLCVLLLAMVGWK 391
Cdd:COG0531   322 PVNAILLTGVIALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLrrrrpdLPRPFRVPLPLIPILGILLCLFLLYL 401
                         410
                  ....*....|....*.
gi 1352183273 392 SLYALIMLAGLWLLLP 407
Cdd:COG0531   402 LGPGALLIGLVLLAIG 417
AA_permease_2 pfam13520
Amino acid permease;
8-361 2.79e-18

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 86.21  E-value: 2.79e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   8 LGLAQGIGLLSTSLLGTGVFAVPALAALvaGNNS-LWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLER 86
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVASG--GPALiVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  87 VTGWLFLSVIPVGLPAALQIAAG-----FGQAMFGWHsWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVA 161
Cdd:pfam13520  79 LAGWSNWFAYVLGLASSASVAASyllsaLGPDLVPTT-WLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLI 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 162 I-----WWAGDIKPANIPFPAPGNI---ELTGLFAALSVMFWCFVGLEAFAHLASEFKNpeRDFPRALMIGLLLAGLVYW 233
Cdd:pfam13520 158 LiiilgLVTADGGGFNLLSGEWHTFfpdGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYI 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 234 GCTVVVLhFDAYGEKMAAAASLPKIVVQLFGV----GALWIACVIGYLACFASLNIYIQSFARLVWSQAQHN---PDHYL 306
Cdd:pfam13520 236 LVNIAFF-GVVPDDEIALSSGLGQVAALLFQAvggkWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGvlpFSRFF 314
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1352183273 307 ARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLA 361
Cdd:pfam13520 315 AKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIG 369
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
4-331 2.44e-09

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 58.99  E-value: 2.44e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   4 LKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNN--SLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFG 81
Cdd:TIGR00911  40 LKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVglALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFG 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  82 SRLERVTGWLFLSVIPVGLPA--ALQIAAGFGQAMFGW----HSWQLLLAELGTLALVWyIGTRGASSSANLQTVIAG-- 153
Cdd:TIGR00911 120 PLLAFLRLWIELLVIRPGSQAvnALNFAIYILTPVFPDcevpEWAIRLVAVLCVLLLTL-VNCLSVKWATRVQDIFTAck 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 154 -LIVALIVAIWWAGDIKPANIPFPAPGNIELT-----GLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLL 227
Cdd:TIGR00911 199 lLALLLIIITGWVQLGKGGVESLNPKNAFEGTetsagGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPI 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 228 AGLVYwgctvvVLHFDAYGEKMAAAASLPKIVV------QLFGVGALWIACVIGyLACFASLNIYIQSFARLVWSQAQHN 301
Cdd:TIGR00911 279 VTFIY------VLTNIAYFTVLSPEELLASLAVavdfgeRLLGVMSWAMPALVG-LSCFGSVNGSLFSSSRLFFVGGREG 351
                         330       340       350
                  ....*....|....*....|....*....|.
gi 1352183273 302 pdHYLARLSSRHI-PNNALNAVLGCCVVSTL 331
Cdd:TIGR00911 352 --HLPSLLSMIHVkRLTPLPSLLIVCTLTLL 380
 
Name Accession Description Interval E-value
PRK11021 PRK11021
putative transporter; Provisional
8-411 0e+00

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 592.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   8 LGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERV 87
Cdd:PRK11021    1 LGLWQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  88 TGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGD 167
Cdd:PRK11021   81 TGWLFLSVIPVGLPAALQIAAGFGQALFGWSSWQLLLAELLTLALLWLLNLRGASSSANLQTVIALLIVALVVAIWWAGD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 168 IKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGE 247
Cdd:PRK11021  161 IKPADIPFPAPGSIEWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 248 KMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQA-QHNPDHYLARLSSRHIPNNALNAVLGCC 326
Cdd:PRK11021  241 KQAAAASLPGIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQArEGRPPSYLARLSARGVPVNALNAVLGCC 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 327 VVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLL 406
Cdd:PRK11021  321 AVSILLIYALGLNLEALIAYANGIFVLIYLLCMLAACKLLKGRYRPLAVLGCLLCLLLLVMLGWKMLYALIMLALLWLFL 400

                  ....*
gi 1352183273 407 PKRKT 411
Cdd:PRK11021  401 PKRKT 405
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-407 1.42e-51

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 178.94  E-value: 1.42e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   1 MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAF 80
Cdd:COG0531     6 SSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRAL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  81 GSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWhSWQLLLAeLGTLALVWYIGTRGASSSANLQTVIAGLIVALIV 160
Cdd:COG0531    86 GPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPA-GGSVLIA-LVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 161 AIWWAG--DIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVV 238
Cdd:COG0531   164 LFIVVGlfAFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLA 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 239 VLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNP-DHYLARLSSRHipNN 317
Cdd:COG0531   244 LTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLlPKVFAKVHPRF--GT 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 318 ALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKL------LQGRYRLLAVVGGLLCVLLLAMVGWK 391
Cdd:COG0531   322 PVNAILLTGVIALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLrrrrpdLPRPFRVPLPLIPILGILLCLFLLYL 401
                         410
                  ....*....|....*.
gi 1352183273 392 SLYALIMLAGLWLLLP 407
Cdd:COG0531   402 LGPGALLIGLVLLAIG 417
AA_permease_2 pfam13520
Amino acid permease;
8-361 2.79e-18

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 86.21  E-value: 2.79e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   8 LGLAQGIGLLSTSLLGTGVFAVPALAALvaGNNS-LWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLER 86
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVASG--GPALiVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  87 VTGWLFLSVIPVGLPAALQIAAG-----FGQAMFGWHsWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVA 161
Cdd:pfam13520  79 LAGWSNWFAYVLGLASSASVAASyllsaLGPDLVPTT-WLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLI 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 162 I-----WWAGDIKPANIPFPAPGNI---ELTGLFAALSVMFWCFVGLEAFAHLASEFKNpeRDFPRALMIGLLLAGLVYW 233
Cdd:pfam13520 158 LiiilgLVTADGGGFNLLSGEWHTFfpdGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYI 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 234 GCTVVVLhFDAYGEKMAAAASLPKIVVQLFGV----GALWIACVIGYLACFASLNIYIQSFARLVWSQAQHN---PDHYL 306
Cdd:pfam13520 236 LVNIAFF-GVVPDDEIALSSGLGQVAALLFQAvggkWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGvlpFSRFF 314
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1352183273 307 ARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLA 361
Cdd:pfam13520 315 AKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIG 369
PRK10644 PRK10644
arginine/agmatine antiporter;
6-240 2.33e-10

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 62.11  E-value: 2.33e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   6 QELGLAQGIGLLSTSLLGTGVFAVPALAALVaGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLE 85
Cdd:PRK10644    8 HKVGLIPVTLMVAGNIMGSGVFLLPANLAST-GGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLG 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  86 RVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAeLGTLALVW---YIGTRGASSSANLQTVIAGLIVALIVAI 162
Cdd:PRK10644   87 YQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLT-ITCVVVLWifvLLNIVGPKMITRVQAVATVLALIPIVGI 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 163 ------WWAGDIkpanipFPAPGNIELTGLFAA----LSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVY 232
Cdd:PRK10644  166 avfgwfWFRGET------YMAAWNVSGLGTFGAiqstLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCY 239

                  ....*...
gi 1352183273 233 WGCTVVVL 240
Cdd:PRK10644  240 VLSSTAIM 247
frlA PRK11357
amino acid permease;
3-301 1.81e-09

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 59.10  E-value: 1.81e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   3 GLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLI--ILVFPIAIVFAILGRHYPSAGGVAHFVGMAF 80
Cdd:PRK11357    5 ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIggLIVIPQMCVYAELSTAYPENGADYVYLKNAG 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  81 GSRLERVTGWL-FLSVIPVGLP-AALQIAAGFGqAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIV-- 156
Cdd:PRK11357   85 SRPLAFLSGWAsFWANDAPSLSiMALAIVSNLG-FLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIip 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 157 -ALIVAI---WWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVY 232
Cdd:PRK11357  164 fTIVIGLgifWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLY 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1352183273 233 WGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVG--ALWIACVIGYLACFASLNIYIQSFARLVWSQAQHN 301
Cdd:PRK11357  244 TLLALVISGLMPFDKLANSETPISDALTWIPALGstAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDN 314
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
4-331 2.44e-09

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 58.99  E-value: 2.44e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   4 LKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNN--SLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFG 81
Cdd:TIGR00911  40 LKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVglALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFG 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  82 SRLERVTGWLFLSVIPVGLPA--ALQIAAGFGQAMFGW----HSWQLLLAELGTLALVWyIGTRGASSSANLQTVIAG-- 153
Cdd:TIGR00911 120 PLLAFLRLWIELLVIRPGSQAvnALNFAIYILTPVFPDcevpEWAIRLVAVLCVLLLTL-VNCLSVKWATRVQDIFTAck 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 154 -LIVALIVAIWWAGDIKPANIPFPAPGNIELT-----GLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLL 227
Cdd:TIGR00911 199 lLALLLIIITGWVQLGKGGVESLNPKNAFEGTetsagGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPI 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 228 AGLVYwgctvvVLHFDAYGEKMAAAASLPKIVV------QLFGVGALWIACVIGyLACFASLNIYIQSFARLVWSQAQHN 301
Cdd:TIGR00911 279 VTFIY------VLTNIAYFTVLSPEELLASLAVavdfgeRLLGVMSWAMPALVG-LSCFGSVNGSLFSSSRLFFVGGREG 351
                         330       340       350
                  ....*....|....*....|....*....|.
gi 1352183273 302 pdHYLARLSSRHI-PNNALNAVLGCCVVSTL 331
Cdd:TIGR00911 352 --HLPSLLSMIHVkRLTPLPSLLIVCTLTLL 380
potE PRK10655
putrescine transporter; Provisional
38-283 2.46e-08

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 55.81  E-value: 2.46e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  38 GNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWL-FLSVIPVGLPAALQiAAGFGQAMFG 116
Cdd:PRK10655   37 GTISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTyGVSLLIANVAIAIS-AVGYGTELFG 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 117 WHSWQLLLAeLGTLALVWyIGT----RGASSSANLQTV-IAGLI--VALIVAI---WWAGDI-----KPANIPFpapgni 181
Cdd:PRK10655  116 ATLSPVQIC-LATIGVLW-LCTvanfGGARITGQISSVtVWGVIipVVGLSIIgwfWFSPSLyvaawNPHHLPF------ 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 182 eLTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQ 261
Cdd:PRK10655  188 -FSAVGSSIAMTLWAFLGLESACANSDAVENPERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQ 266
                         250       260
                  ....*....|....*....|....
gi 1352183273 262 LFG--VGALWIACVIgyLACFASL 283
Cdd:PRK10655  267 MFNptVGKIVMALMV--MSCCGSL 288
cadB PRK10435
cadaverine/lysine antiporter;
1-283 8.80e-08

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 53.99  E-value: 8.80e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273   1 MSGLKQeLGLAQGIGLLSTSLLGTGVfAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGG---VAHFVG 77
Cdd:PRK10435    1 MSSAKK-IGLFACTGVVAGNMMGSGI-ALLPANLASIGSIAIWGWIISIIGAMSLAYVYARLATKNPQQGGpiaYAGEIS 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  78 MAFGSRlervTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSwQLLLAELGTLALVW---YIGTRGASSSANLQTViaGL 154
Cdd:PRK10435   79 PAFGFQ----TGVLYYHANWIGNLAIGITAVSYLSTFFPVLN-DPIPAGIACIAIVWvftFVNMLGGTWVSRLTTI--GL 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 155 IVALI------VAIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLA 228
Cdd:PRK10435  152 VLVLIpvvgtaIVGWHWFDAATYAANWNTSDTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLA 231
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1352183273 229 GLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASL 283
Cdd:PRK10435  232 GIIYIAATQVISGMFPASVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSL 286
AA_permease pfam00324
Amino acid permease;
23-361 2.30e-06

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 49.63  E-value: 2.30e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  23 GTGVFAVPALAALVAGNNSLW-AWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLP 101
Cdd:pfam00324  12 GTGLFVGSGSVLGQAGPAGALlGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWNYWLSWITVLA 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 102 AALQIAAGFgqaMFGWHS-------WQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVA--LIVAIWWAGDIKPAN 172
Cdd:pfam00324  92 LELTAASIL---IQFWELvpdipylWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIgfIIVGIILLSGGNPND 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 173 IPFPA----------PGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWG---CTVVV 239
Cdd:pfam00324 169 GAIFRylgdnggknnFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYILsllAIGLL 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 240 LHFDAYGEKMAAAASLPKIVVQLFGVG----ALWIACVIgYLACFASLNIYIQSFARLVWSQAQHN-PDHYLARLSSRHI 314
Cdd:pfam00324 249 VPWNDPGLLNDSASAASPFVIFFKFLGisglAPLINAVI-LTAALSAANSSLYSGSRMLYSLARDGlAPKFLKKVDKRGV 327
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1352183273 315 PnnaLNAVLGCCVVSTLVIHALEINL----DALIIYANGIFIMIYLLCMLA 361
Cdd:pfam00324 328 P---LRAILVSMVISLLALLLASLNPaivfNFLLAISGLSGLIVWGLISLS 375
PRK10249 PRK10249
phenylalanine transporter; Provisional
185-319 9.16e-05

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 44.59  E-value: 9.16e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 185 GLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLpkiVVQLFG 264
Cdd:PRK10249  210 GLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPF---VMIFHN 286
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1352183273 265 VGALWIACVIGYLACFASLNIY---IQSFARLVWS-QAQHNPDHYLARLSSRHIPNNAL 319
Cdd:PRK10249  287 LDSNVVASALNFVILVASLSVYnsgVYSNSRMLFGlSVQGNAPKFLTRVSRRGVPINSL 345
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
183-237 1.48e-03

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 40.95  E-value: 1.48e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1352183273 183 LTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTV 237
Cdd:TIGR00906 230 FTGVLSGAATCFFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSA 284
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
195-332 2.46e-03

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 40.11  E-value: 2.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 195 WCFVGLEAFAHLASEFKNPERDFPRAlMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLF------GVGAL 268
Cdd:TIGR00907 228 WSMTGYDGTAHMAEEIENPEVVGPRA-IIGAVAIGIVTGFCFNIVLFFSMGDIDSLISSTTGQPIAQIFynalgnKAGAI 306
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1352183273 269 WIACVIGYLACFASLNIyIQSFARLVWSQAQHNP---DHYLARLSSRhiPNNALNAVLGCCVVSTLV 332
Cdd:TIGR00907 307 FLLCLILVTSFFCAITC-MTANSRMIYAFSRDGGlpfSPLWSRVNPR--TQVPLNAVWLSAVWIILI 370
PutP COG0591
Na+/proline symporter [Amino acid transport and metabolism];
20-291 8.36e-03

Na+/proline symporter [Amino acid transport and metabolism];


Pssm-ID: 440356 [Multi-domain]  Cd Length: 476  Bit Score: 38.26  E-value: 8.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273  20 SLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYpSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVG 99
Cdd:COG0591    52 TWLSAWTFLGVPGLAYAYGLSALWYALGYALGALLLALFFAPRLRRL-GALTIPEFLEKRFGRGLRLLAAIIILLFLLGY 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 100 LPAALQIAAGFGQAMFGWHSWQ-LLLAELGTLALVWYIGTRGASSSANLQTVI--AGLIVALIVAIWWAGDIKPANIPFP 176
Cdd:COG0591   131 LAAQLVALGKLLEALFGIPYWLgILIGALIVLLYTVLGGLRAVAWTDVLQGILmlVGLILLLIVALSALGGFGELFAALP 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1352183273 177 APGNIELTGLFAALS----VMFWCFVGLEAFA--HLASEF---KNPeRDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGE 247
Cdd:COG0591   211 APGLLSLFPGLGFTGwlafLGLFLAIGLGYFGqpHIVQRFlaaKSE-KEARKAALIGGLLYLLFYLLAALIGLLARALFP 289
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1352183273 248 KMAAAAS---LPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFA 291
Cdd:COG0591   290 DLPLADPdlaLPLLILELLPPGLAGLLLAAILAAAMSTADSQLLAAS 336
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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