|
Name |
Accession |
Description |
Interval |
E-value |
| flgG |
PRK12693 |
flagellar basal body rod protein FlgG; Provisional |
1-262 |
1.63e-167 |
|
flagellar basal body rod protein FlgG; Provisional
Pssm-ID: 183687 [Multi-domain] Cd Length: 261 Bit Score: 463.18 E-value: 1.63e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSSQNTKLPSGLMLGAGSKVVATQKV 80
Cdd:PRK12693 1 MIRALWIAKTGLDAQQTNIDVISNNLANVNTTGFKKSRAVFEDLLYQTIRQPGAQSSQNTTLPSGLQVGTGVRPVATQKI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 81 HTHGNVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSGaGYNLEPEIVIPPDAISITVGNDGEVSV 160
Cdd:PRK12693 81 FTQGNLQQTGNSLDVAIEGQGFFQVQLPDGTIAYTRDGSFKLDQDGQLVTSG-GYPLQPEITIPENATSITIGTDGTVSV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 161 RLRGQQNNQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRV 240
Cdd:PRK12693 160 TQAGQAAPQVVGQITLTDFINPAGLESIGENLYLETAASGAPIEGTPGLNGLGTLRQGFLETSNVNVVEELVNMITGQRA 239
|
250 260
....*....|....*....|..
gi 1447671805 241 YEMNSKVISAVDKMMSFVNQQL 262
Cdd:PRK12693 240 YEMNSKAISTADQMLQYVNQLL 261
|
|
| flgG_G_neg |
TIGR02488 |
flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the ... |
4-262 |
1.42e-140 |
|
flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the FlgG protein of the flagellar apparatus in the Proteobacteria and spirochetes. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 131541 [Multi-domain] Cd Length: 259 Bit Score: 395.18 E-value: 1.42e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 4 ALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSS-QNTKLPSGLMLGAGSKVVATQKVHT 82
Cdd:TIGR02488 1 ALWTAATGMNAQQTNMDVISNNLANVNTTGFKKDRAEFEDLLYQTERQPGAQSSeQQTILPVGVQVGLGVRVVATQKLFT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 83 HGNVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSgAGYNLEPEIVIPPDAISITVGNDGEVSVRL 162
Cdd:TIGR02488 81 QGSLQNTGNDLDLAIEGEGFFQVLMPDGTTAYTRDGAFKINAEGQLVTS-NGYPLQPEITIPENATSITVGSDGEVSVRQ 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 163 RGQQNNQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYE 242
Cdd:TIGR02488 160 GGQTEPQEVGQITLATFINPAGLEAVGENLFRETPASGPPQIGTPGLDGFGKLRQGFLEASNVNVVQEMVDMITAQRAYE 239
|
250 260
....*....|....*....|
gi 1447671805 243 MNSKVISAVDKMMSFVNQQL 262
Cdd:TIGR02488 240 MNSKAIQASDQMLQTVSQLL 259
|
|
| FlgG |
COG4786 |
Flagellar basal body rod protein FlgG [Cell motility]; |
5-262 |
1.60e-127 |
|
Flagellar basal body rod protein FlgG [Cell motility];
Pssm-ID: 443816 [Multi-domain] Cd Length: 260 Bit Score: 362.21 E-value: 1.60e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 5 LWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSSQNTKLPSGLMLGAGSKVVATQKVHTHG 84
Cdd:COG4786 1 LYTAASGMLAQQTRLDVISNNLANVNTTGFKRDRAVFEDLLYQLIRRPGAPSSQGTQTPVGLQLGTGVRVAATQTDFTQG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 85 NVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSGaGYNLEPE---IVIPPDAISITVGNDGEVSVR 161
Cdd:COG4786 81 SLQQTGNPLDLAIEGDGFFQVQTPDGETAYTRDGSFQLDADGQLVTSD-GYPVLPEngpITIPEDATSITISEDGTVSVT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 162 LrGQQNNQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVY 241
Cdd:COG4786 160 L-ADGDGQQVGQLGLVDFANPAGLEKVGDNLFRETAASGAPIVGTPGEDGLGTLRQGYLEGSNVDVVEEMVDMIEAQRAY 238
|
250 260
....*....|....*....|.
gi 1447671805 242 EMNSKVISAVDKMMSFVNQQL 262
Cdd:COG4786 239 EANSKVIQTADEMLGKANNLR 259
|
|
| flgG |
PRK12816 |
flagellar basal body rod protein FlgG; Reviewed |
1-259 |
1.68e-95 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 183766 [Multi-domain] Cd Length: 264 Bit Score: 281.31 E-value: 1.68e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSSQNTKLPSGLMLGAGSKVVATQKV 80
Cdd:PRK12816 1 MMRSLWTAASGMNAQQFNIDTIANNLANVNTTGFKKIRAEFEDLIYQTQRRAGTPATEDTVTPLGVQVGHGVKVAATQRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 81 HTHGNVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSGaGYNLEPEIVIPPDAI--SITVGNDGEV 158
Cdd:PRK12816 81 FEQGSLQATGNKLDVAIEGEGFFKILMPDGTYAYTRDGSFKIDANGQLVTSN-GYRLLPEIIFPENYIlnSITISEEGIV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 159 SVRLRGQQNNQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQ 238
Cdd:PRK12816 160 SVKVGEDNDPIELGQIELYRFVNPAGLSAIGKNLFKETIASGQEIPGIPGSEGFGRVLQGFLEMSNVSIVEEMVTMIVAQ 239
|
250 260
....*....|....*....|.
gi 1447671805 239 RVYEMNSKVISAVDKMMSFVN 259
Cdd:PRK12816 240 RAYEINSKAIQTSDNMLGTAN 260
|
|
| FlgEFG_subfam |
TIGR03506 |
flagellar hook-basal body protein; This model encompasses three closely related flagellar ... |
4-244 |
7.77e-82 |
|
flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.
Pssm-ID: 274616 [Multi-domain] Cd Length: 231 Bit Score: 245.24 E-value: 7.77e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 4 ALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGgqssqntklpsglMLGAGSKVVATQKVHTH 83
Cdd:TIGR03506 2 ALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDLLSQSVSGSG-------------QVGGGVRTSGVATDFSQ 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 84 GNVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSgAGYNLEPE----IVIPPDAISITVGNDGEVS 159
Cdd:TIGR03506 69 GSLQSTGNSLDLAISGDGFFVVQTPDGSEAYTRAGSFKLDADGYLVTS-DGYPLLDWgggpITLPPDAGSVSIGEDGTVS 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 160 VRLRGQQNnQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQR 239
Cdd:TIGR03506 148 ATYSNGQT-VELGQIALANFPNPDGLRKEGGNLYSATPGSGAALVGAPGTGGFGTLVSGALEGSNVDLAEELVNMISAQR 226
|
....*
gi 1447671805 240 VYEMN 244
Cdd:TIGR03506 227 AYQAN 231
|
|
| flgG |
PRK12692 |
flagellar basal body rod protein FlgG; Reviewed |
4-262 |
1.72e-80 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 139158 [Multi-domain] Cd Length: 262 Bit Score: 242.83 E-value: 1.72e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 4 ALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQnINQPGGQSSQN--TKLPSGLMLGAGSKVVATQKVH 81
Cdd:PRK12692 3 ALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDLLYQ-AERQQGVPNQAgqEAVPEGAMLGLGVRAAAIRNLH 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 82 THGNVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSgAGYNLEPEIVIPPDAISITVGNDGEVSVR 161
Cdd:PRK12692 82 RQGSLAQTGNQLDLAVNGRGYFQVTSPNGEIQYTRAGSFNKNAAGQLVTM-EGYAVDPAILIPQNTTQVTINESGQVFAK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 162 LRGQQNNQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVY 241
Cdd:PRK12692 161 IDGQVAPQNLGQLTLANFANESGLEPLGNGLYRETPASGAPVVGNPGDVGFGKIQQGYLEGSNVDPVKEITSLITAQRAF 240
|
250 260
....*....|....*....|.
gi 1447671805 242 EMNSKVISAVDKMMSFVNQQL 262
Cdd:PRK12692 241 EMNSKVIQAADEMAGTVSKGI 261
|
|
| flgG |
PRK12636 |
flagellar basal body rod protein FlgG; Provisional |
16-255 |
1.34e-64 |
|
flagellar basal body rod protein FlgG; Provisional
Pssm-ID: 183640 [Multi-domain] Cd Length: 263 Bit Score: 202.29 E-value: 1.34e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 16 QTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGqSSQNTKLPSGLMLGAGSKVVATQKVHTHGNVQTTTNSLDM 95
Cdd:PRK12636 16 QTKLDVIGNNIANVNTYGFKKSRVTFKDMVSQTISGASG-PTANRGGVNSKQVGLGSQLGAIDTIHTQGSLQTTGRPLDL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 96 MIEGDGFFQILMPDgNIAYSRNGQFTLNDEGAIVTSGAGYNLEP---EIVIPPDAISITVGNDGEVSVRLRGQqNNQVVG 172
Cdd:PRK12636 95 AISGDGFFRVGDGD-NTAYTRAGNFYLDNEGNIVNADGLYLLGMnggRIQIPTDAQSFSIGADGTVSYVDAGG-ELQTAG 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 173 QITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISAVD 252
Cdd:PRK12636 173 QIGLATFANPDGLEKAGDNLYRETLNSGTPSAVVPGEGGTGKIVSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSD 252
|
...
gi 1447671805 253 KMM 255
Cdd:PRK12636 253 EIL 255
|
|
| FlgE |
COG1749 |
Flagellar hook protein FlgE [Cell motility]; |
10-255 |
1.12e-55 |
|
Flagellar hook protein FlgE [Cell motility];
Pssm-ID: 441355 [Multi-domain] Cd Length: 414 Bit Score: 183.83 E-value: 1.12e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 10 TGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINqpGGQSSQNtklpsglmlGAGSKVVATQKVHTHGNVQTT 89
Cdd:COG1749 10 SGLNAASTALDVIGNNIANSNTVGFKSSRAEFADLVAQSLS--GANPTQV---------GGGVRVASVAQIFTQGSLQST 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 90 TNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSgAGYNL------------------EPeIVIP------- 144
Cdd:COG1749 79 GNALDLAISGNGFFVVSDSGGQTYYTRAGSFSLDKDGYLVNS-SGLYLqgypadadgtipdtggglEP-IQIPtgqlpak 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 --------------------------------------------------------------------------------
Cdd:COG1749 157 attkvtlggnlpadatvptapfdptdpttynfstsvtvydslgnshtltlyftktgantwtvyvtvdgadvtggtgatgt 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 145 ----------------PDAISITVGNDG----EVSVRLRG-------------QQN------------------------ 167
Cdd:COG1749 237 gtltfdsngkltsptsGGPGTLTLTVNGaapqTITLDLSGltqyassfsvtslTQDgyaagtltgvsidddgvvtatysn 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 168 --NQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYEMNS 245
Cdd:COG1749 317 gqTRPLGQIALATFANPQGLQKLGGNLWAETANSGEPLLGTAGTGGLGSIQSGALESSNVDLAEELVNMIVAQRAYQANA 396
|
410
....*....|
gi 1447671805 246 KVISAVDKMM 255
Cdd:COG1749 397 KVITTSDEML 406
|
|
| flgG |
PRK12817 |
flagellar basal body rod protein FlgG; Reviewed |
1-259 |
2.19e-50 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 183767 [Multi-domain] Cd Length: 260 Bit Score: 166.02 E-value: 2.19e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSSQNTKLpsglMLGAGSKVVATQKV 80
Cdd:PRK12817 1 MLRAFWNSKSGMNAQQEKLDSISNNLANVNTTGYKREDVSFSDLVYETLDRKGYPTNDKPEI----ITGTGVKATNWIRD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 81 HTHGNVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSG---------AGYNLEPEIViPPDAISIT 151
Cdd:PRK12817 77 NQQGNLLTTGNKTDLAIDGEGFFRVIMADGTYAYTRAGNFNIDSNGMLVDDNgnrleiqleAGVGINNRNT-GFDSNNFT 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 152 VGNDGEVSVRLRGQQnNQVVGQITTVDFINPGGLEPIGQNLYLPTgasgdpqEGV-PGLDGLGDVRQSMLETSNVNVTEE 230
Cdd:PRK12817 156 VDEDGGISVKNVDGQ-NKKVGKINIYNAVGNDAFISIGDNLYVPS-------DGVqVFLNNDVDILQGYLENSNVDLGKE 227
|
250 260
....*....|....*....|....*....
gi 1447671805 231 LVNMIEAQRVYEMNSKVISAVDKMMSFVN 259
Cdd:PRK12817 228 MTDMIITQRAFQLSSKGIKTADEMWGIIN 256
|
|
| flgE |
PRK05682 |
flagellar hook protein FlgE; Validated |
10-255 |
2.49e-50 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235557 [Multi-domain] Cd Length: 407 Bit Score: 170.02 E-value: 2.49e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 10 TGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSsqntklpsglmlGAGSKVVATQKVHTHGNVQTT 89
Cdd:PRK05682 8 SGLNAASNRLDVIGNNIANANTTGFKSSRAEFADLYANSAGTNPTQV------------GSGVKVAGVAQQFSQGSITST 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 90 TNSLDMMIEGDGFFqILMPDGNIAYSRNGQFTLNDEGAIVTSGAGY------------------NLEPeIVIPPDAI--- 148
Cdd:PRK05682 76 GNSLDLAISGNGFF-VVSNGGNGFYTRAGAFKLDKNGYLVNAAGYYlqgypadadggtpptvgaGLVP-LNIPTTALapk 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 --------------------------------------------------------------------------------
Cdd:PRK05682 154 attsgtfqgnlpstaafdptdpdtynhstsltvydslgnshtldvyfvktgdntwevyvyddgkpvsttatgtgtttltf 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 149 -------------------------------------------------------------SITVGNDGEVSVRLRGQQn 167
Cdd:PRK05682 234 dsngalttttspttfnitggatngadggqtitldlsgstqyasgftvsattqdgyapgtltGYSIDDDGTVTAVYSNGQ- 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 168 NQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYEMNSKV 247
Cdd:PRK05682 313 TKPLGQIALANFANPDGLTKVGGNVWSATAASGVALIGTAGSGGFGTIQSGALESSNVDLSTELVNMIVAQRNYQANAKT 392
|
....*...
gi 1447671805 248 ISAVDKMM 255
Cdd:PRK05682 393 IKTQDQLL 400
|
|
| flgF |
PRK12690 |
flagellar hook-basal body complex protein; |
19-253 |
3.93e-34 |
|
flagellar hook-basal body complex protein;
Pssm-ID: 183685 [Multi-domain] Cd Length: 238 Bit Score: 123.25 E-value: 3.93e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 19 IATISNNLANASTIGFKKGRAVFEDlFYQNInqPGGQSSqntklpsgLMLGAGSkvvATQKVHTHGNVQTTTNSLDMMIE 98
Cdd:PRK12690 19 MQVVANNIANASTTGFRREGLVFSE-YVKSL--DSGEAS--------LSMARAS---GRQTDLEQGGLTQTGGQFDFAIE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 99 GDGFFQILMPDGNiAYSRNGQFTLNDEGAIVTSgAGYNL----EPEIVIPPDAISITVGNDGEVSVrlrgqqNNQVVGQI 174
Cdd:PRK12690 85 GEGFFMVETPQGE-RLTRAGSFTPNAEGELVDP-DGNRLldagGAPIFIPPDARSVAVGADGTLSA------DGQPLGQI 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1447671805 175 TTVDFINPGGLEPIGQNLYLPTGASgDPQEGvpgldglGDVRQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDK 253
Cdd:PRK12690 157 GLYQPTDPLGLRREGGTRFRAEGGV-EPAEG-------ARLLQGFLEGSNVNPVSEIARMIEVQRAYELGQSFLDREDE 227
|
|
| flgG |
PRK12818 |
flagellar basal body rod protein FlgG; Reviewed |
1-252 |
7.38e-34 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 183768 [Multi-domain] Cd Length: 256 Bit Score: 122.89 E-value: 7.38e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAV---FEDLFYQNINQPGGQSSQNTKLPsglMLGAGSKVVAT 77
Cdd:PRK12818 1 MIRGLYTAVSGMITLEAKQDVITNNLANVNTVGYKSDNLAfksFEDVLIENYDKKVGNKNVKNIIG---GLSMGSKIDEV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 78 QKVHTHGNVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSgAGYN----------LEPeivippda 147
Cdd:PRK12818 78 NTLFTQGIIKSTDKPTDFAIQGRGFFTVERNAGNNYYTRDGHFHVDTQGYLVND-SGYYvlgrnnatgaREP-------- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 148 isITVGNDgevSVRLRGQQNNQVVG----QITTVDFINPGGLEPIGQNLYlpTGasGDPQEGVPGLdglgdVRQSMLETS 223
Cdd:PRK12818 149 --INVGNG---KFSTDADGNISLDGnasyKFNVADFNDYNSLKKIGDNLY--TG--NNPQNINGAI-----VRQNSLEKS 214
|
250 260
....*....|....*....|....*....
gi 1447671805 224 NVNVTEELVNMIEAQRVYEMNSKVISAVD 252
Cdd:PRK12818 215 NVNVTNEMVNMMTTMRSFETNQKIVQSID 243
|
|
| flgF |
PRK12689 |
flagellar basal-body rod protein FlgF; |
1-254 |
3.76e-32 |
|
flagellar basal-body rod protein FlgF;
Pssm-ID: 183684 [Multi-domain] Cd Length: 253 Bit Score: 118.31 E-value: 3.76e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVsktGLDAQQT---NIATISNNLANASTIGFKKGRAVFEDlfYQNinqpGGQSSQNTKLPSGLMlgagSKVV-- 75
Cdd:PRK12689 1 MQNALLV---GLSRQMAlerQLDVVANNVANVNTNGFKARSSLFQE--YLM----PGAHEDNFQRPDRRV----SYVQdr 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 76 ATQKVHTHGNVQTTTNSLDMMIEGDGFFQILMPDGNiAYSRNGQFTLNDEGAIVTSgAGYNLEPE---IVIPPDAISITV 152
Cdd:PRK12689 68 GTPLDLSQGPLEQTKNPLDVAIDGDAFLAVQTPQGE-RYTRDGALEINAQGQLVTS-DGYPVLGTggpITFQPTDTGIAI 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 153 GNDGEVSVRLRGQQNNQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPqegvpglDGLGDVRQSMLETSNVNVTEELV 232
Cdd:PRK12689 146 SPDGTVSVNEGTATTDSIRGKLRLVTFANPQALKKEGANLYAATAPARPA-------DTKARVEQGYIERSNVNPVLEMT 218
|
250 260
....*....|....*....|..
gi 1447671805 233 NMIEAQRVYEMNSKVISAVDKM 254
Cdd:PRK12689 219 RMMEVNRTYTQVSSMLQQQSDL 240
|
|
| flgF |
PRK12640 |
flagellar basal body rod protein FlgF; Reviewed |
1-254 |
5.67e-31 |
|
flagellar basal body rod protein FlgF; Reviewed
Pssm-ID: 183642 [Multi-domain] Cd Length: 246 Bit Score: 114.95 E-value: 5.67e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVSKTG----LDAQqtniATISNNLANASTIGFKkgravfEDLfYQNINQPggqssqntklpsglMLGAG--SKV 74
Cdd:PRK12640 1 MDRALYTAMSGasqnLNQQ----AVVANNLANASTPGFR------ADL-AQARAVP--------------VFGEGlpTRV 55
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 75 VATQKV----HTHGNVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTsGAGYNLEPE---IVIPPDA 147
Cdd:PRK12640 56 FALASTpgadFSPGPLQTTGRPLDVALQGDGWLAVQAPDGSEAYTRNGSLQVDANGQLRT-ANGLPVLGDggpIAVPPGA 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 148 iSITVGNDGEVSVRLRGQQNNQV--VGQITTVDfinpgglePIGQNLY--------LPTGASGDPQEGVPGLDGlgdvrq 217
Cdd:PRK12640 135 -KITIGADGTISALPPGDPPNAVaeVGRLKLVN--------PPAAQLTrgddglfrTTDGAPAPADPTVRVMSG------ 199
|
250 260 270
....*....|....*....|....*....|....*..
gi 1447671805 218 sMLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKM 254
Cdd:PRK12640 200 -ALEGSNVNAVEEMVSMIALARQFEMQVKMMKTADEN 235
|
|
| flgF |
PRK12642 |
flagellar basal-body rod protein FlgF; |
1-256 |
1.46e-26 |
|
flagellar basal-body rod protein FlgF;
Pssm-ID: 237153 [Multi-domain] Cd Length: 241 Bit Score: 103.59 E-value: 1.46e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSSQntklpsglmlgaGSKVVATQkv 80
Cdd:PRK12642 1 MQSGLYVALSSQMALEKRLDTIADNVANVNTVGFRATEVKFDTVVSDTASKKVAFVSQ------------GKSYLSTE-- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 81 htHGNVQTTTNSLDMMIEGDGFFQILMPDGnIAYSRNGQFTLNDEGAIVTSgAGYN-LEP---EIVIPPDAISITVGNDG 156
Cdd:PRK12642 67 --AGPLTKTGNPLDFAVKGDAWFSFDTPAG-QVYTRDGRFTMTSTGELVSV-TGYPvLDAggaPIQLNPGGGEPTIGADG 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 157 EVSvrlrgqQNNQVVGQITTVDFINPGGLEPIGQNLYLPTgasgDPQEGVPGLDGLGdVRQSMLETSNVNVTEELVNMIE 236
Cdd:PRK12642 143 AIY------QNGVQVGAIGLFEIDADAGLLRYGNSGVIPD----KPPQPVVDRNSVG-VVQGYLEGSNVNAMTEMTQLIS 211
|
250 260
....*....|....*....|
gi 1447671805 237 AQRVYEMNSKVISAVDKMMS 256
Cdd:PRK12642 212 VSRAFESVSSLMRQSESSVS 231
|
|
| flgE |
PRK06803 |
flagellar basal body protein FlaE; |
10-255 |
3.99e-24 |
|
flagellar basal body protein FlaE;
Pssm-ID: 235862 [Multi-domain] Cd Length: 402 Bit Score: 99.85 E-value: 3.99e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 10 TGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFyqNINQPGGQSSQNTklpsglmlgagskvvaTQKVHTHGNVQTT 89
Cdd:PRK06803 8 SGLNATTQQLNTISNNIANSSTKGFKGSRTEFSSIY--NGGQPGGVEVSSV----------------SQNFSKDGSLTYT 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 90 TNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGaIVTSGAG----------------------------------- 134
Cdd:PRK06803 70 GRGLDLAISGGGFFVLKESDGDTAYTRAGMFRSDVDG-YLTDPQGmklqgypvdaagnlqtgnvsdlqvqtaslpakatd 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 135 ---------------------------------------------------------------YNLEPEIVIPPDAISIT 151
Cdd:PRK06803 149 qldfvanldasvtpidpsvspfdptdeksynssttstvydslgnehavtqyfvktatnewavhYTVDGGDVTPPLGHTLQ 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 152 VGNDGEVS------------------------------------------------------VRL-----------RGQq 166
Cdd:PRK06803 229 FDDTGALIpgkgstinlhgtfnpagasdydididytgstqyaadfnnsrnksngytsgelngVRIedngmvyatytNGQ- 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 167 nNQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYEMNSK 246
Cdd:PRK06803 308 -RQLQGQVVLANFANPNGLVTVSNTAWSASNKSGAPILGTPGTGTLGSLTSGALEGSNVDITAELVGLMTAQRNYQANAK 386
|
....*....
gi 1447671805 247 VISAVDKMM 255
Cdd:PRK06803 387 VISTNDTMQ 395
|
|
| Flg_bbr_C |
pfam06429 |
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ... |
183-260 |
1.55e-22 |
|
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.
Pssm-ID: 428939 [Multi-domain] Cd Length: 74 Bit Score: 88.09 E-value: 1.55e-22
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1447671805 183 GGLEPIGQNLYLPTgaSGDPQEGVpglDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMSFVNQ 260
Cdd:pfam06429 1 AGLEKGGDNLFRET--DGAPILGA---GADGRVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQ 73
|
|
| flgE |
PRK08425 |
flagellar hook protein FlgE; Validated |
1-135 |
6.53e-21 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 236263 [Multi-domain] Cd Length: 731 Bit Score: 91.68 E-value: 6.53e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNI-------NQPGGQSSqntklpsgLMLGAGSK 73
Cdd:PRK08425 1 MMRSLWSGVSGLQAHQIAMDVEGNNIANVNTTGFKYSRASFVDMLSQTKliatapkGGLGGQND--------MQIGLGVG 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1447671805 74 VVATQKVHTHGNVQTTTNSLDMMIEGDGFFqILMPDGNI--AYSRNGQFTLNDEGAIVTSgAGY 135
Cdd:PRK08425 73 VSSTTKIFSQGSIQNTDKNTDLAIQGDGFF-IVSPDGGTtrNYTRDGDFKFDAQGNFVNN-GGY 134
|
|
| flgF |
TIGR02490 |
flagellar basal-body rod protein FlgF; Members of this protein are FlgF, one of several ... |
141-242 |
3.70e-18 |
|
flagellar basal-body rod protein FlgF; Members of this protein are FlgF, one of several homologous flagellar basal-body rod proteins in bacteria. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274160 [Multi-domain] Cd Length: 89 Bit Score: 76.90 E-value: 3.70e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 141 IVIPPDAiSITVGNDGEVSvrlrgqQNNQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGldglgdVRQSML 220
Cdd:TIGR02490 1 IVLPPDG-DITIGADGTIS------QDGEEVGRLGLVNFDNPNQLQREGDGLFRATGGGPAPADSNVR------VVQGYL 67
|
90 100
....*....|....*....|..
gi 1447671805 221 ETSNVNVTEELVNMIEAQRVYE 242
Cdd:TIGR02490 68 EGSNVNAVSEMVDMIEAQRAYE 89
|
|
| flgF |
PRK12641 |
flagellar basal-body rod protein FlgF; |
1-260 |
2.73e-15 |
|
flagellar basal-body rod protein FlgF;
Pssm-ID: 105809 [Multi-domain] Cd Length: 252 Bit Score: 73.05 E-value: 2.73e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGravFEdLFYQNINQPGGQSSQNtklpsglmlgagsKVVATQKV 80
Cdd:PRK12641 1 MENSIYKSMIAANKLLEKQAIIANNLANISTTGFKEK---FI-LAIQNHNVKNLYNSDK-------------KITKEYYN 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 81 HTHGNVQTTTNSLDMMIEGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSGAGYNLEPEIVIPPDAISITVGNDGEVSV 160
Cdd:PRK12641 64 LSPGTLRYTGRNLDLFIKDNGWLTIKDTNGQEAYTKNGHLKINSKRKLTVQNNEVIGNNGNIIIPKNINLKISSNGVITS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 161 RLRGQQN--NQVVGQITTVDFINpGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVR--QSMLETSNVNVTEELVNMIE 236
Cdd:PRK12641 144 IKNNHKHivETKIGSLKLVQLPS-QDLIQKENGLFYLKKNNEINKKHTKNIKHSSKIRvqSGMLEESNVNASKNMIEMIS 222
|
250 260
....*....|....*....|....
gi 1447671805 237 AQRVYEMNSKVISAVDKMMSFVNQ 260
Cdd:PRK12641 223 NARQFEMQMKIISMCDQNTEYANQ 246
|
|
| flgE |
PRK12637 |
flagellar hook protein FlgE; Provisional |
148-255 |
2.01e-14 |
|
flagellar hook protein FlgE; Provisional
Pssm-ID: 183641 [Multi-domain] Cd Length: 473 Bit Score: 72.48 E-value: 2.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 148 ISITVGNDGEVSVRLRGQQNnQVVGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNV 227
Cdd:PRK12637 360 MGLSVGKDGSLVAKYTNGET-QTIGTLVLANFNNVQGLQPVGNNAWVETSESGQATLGQPGTNGLATIAGQALEASNVDM 438
|
90 100
....*....|....*....|....*...
gi 1447671805 228 TEELVNMIEAQRVYEMNSKVISAVDKMM 255
Cdd:PRK12637 439 SRELVNMIVAQRTYQANAQTIKTQDEVM 466
|
|
| flgG |
PRK12819 |
flagellar basal-body rod protein FlgG; |
5-254 |
3.71e-14 |
|
flagellar basal-body rod protein FlgG;
Pssm-ID: 183769 [Multi-domain] Cd Length: 257 Bit Score: 70.29 E-value: 3.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 5 LWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSSQNTKlpsglMLGAGSKVVATQKVHTHG 84
Cdd:PRK12819 4 LYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG-----SVDYAVVPAATHVNLVQG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 85 NVQTTTNSLDMMI----EGDGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSGAGYNLEP--EIVIPPDAISITVGNDGEv 158
Cdd:PRK12819 79 NIQMTNSDTDFFLddgpAGTSSFFVTSKNGETFLTRDGSFTLNSDRYLQTASGAFVMGEnnERIRIPEGAKVAVQADGT- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 159 svrLRGQQNNQVVGQITTvDFINPGGLEPIGQN----LYLPTGASGDPQEGVpgldglGDVRQSMLETSNVNVTEELVNM 234
Cdd:PRK12819 158 ---LYDAVTQNNIARLQT-KTVSAEQNDRLVQRenksFTLAEGNIANLPNGQ------GIVKNGMLENSNVDMTKEMADL 227
|
250 260
....*....|....*....|
gi 1447671805 235 IEAQRVYEMNSKVISAVDKM 254
Cdd:PRK12819 228 MTDQRMIQASQRVMTSFDKI 247
|
|
| flgE |
PRK08425 |
flagellar hook protein FlgE; Validated |
171-255 |
1.62e-12 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 236263 [Multi-domain] Cd Length: 731 Bit Score: 67.03 E-value: 1.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 171 VGQITTVDFINPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISA 250
Cdd:PRK08425 639 LAQVALANFANNAGLQAEGGNVFSQTANSGQAVIGAAGTGGRGSISGSKLEMSNVDLSRSLTQLIVIQRGFQANSKTITT 718
|
....*
gi 1447671805 251 VDKMM 255
Cdd:PRK08425 719 SDQML 723
|
|
| flgE |
PRK12637 |
flagellar hook protein FlgE; Provisional |
10-137 |
7.68e-12 |
|
flagellar hook protein FlgE; Provisional
Pssm-ID: 183641 [Multi-domain] Cd Length: 473 Bit Score: 64.78 E-value: 7.68e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 10 TGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNinqpggqssqntklpsglMLGAGSKVVATQKVHTHGNVQTT 89
Cdd:PRK12637 8 SGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYASS------------------RVGLGVKVSAINQRFTVGNISTT 69
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1447671805 90 TNSLDMMIE-GDGFFQILMPDGNIAYSRNGQFTLnDEGAIVTSGAGYNL 137
Cdd:PRK12637 70 GGEYDMAIDgGKGFFRLTDQSGGVFYSRNGEFMV-DKNFYIVNAQGFRL 117
|
|
| flgE |
PRK05841 |
flagellar hook protein FlgE; Validated |
169-255 |
1.04e-10 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235620 [Multi-domain] Cd Length: 603 Bit Score: 61.40 E-value: 1.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 169 QVVGQITTVDFINPGGLEPIGQNLYLPTGAS--GDPQ--EGVP--GLDG-----LGDVRQSMLETSNVNVTEELVNMIEA 237
Cdd:PRK05841 498 EPMGRIGIAAFTNDQGLRKVGGNLFEMQEGTinGENRplSGNPilGWDEegklkFGKVRHKYLETSNVDAGNALTNLILM 577
|
90
....*....|....*...
gi 1447671805 238 QRVYEMNSKVISAVDKMM 255
Cdd:PRK05841 578 QRGYSMNARAFGTGDDLI 595
|
|
| flgF |
PRK12643 |
flagellar basal body rod protein FlgF; Reviewed |
20-177 |
7.27e-09 |
|
flagellar basal body rod protein FlgF; Reviewed
Pssm-ID: 139117 [Multi-domain] Cd Length: 209 Bit Score: 54.47 E-value: 7.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 20 ATISNNLANASTIGFkkgRAVFEDLFYQNINQPggqssqntKLPSGLMLGAGSKVVATqkvhTHGNVQTTTNSLDMMIEG 99
Cdd:PRK12643 20 AVTANNLANASTPGF---RAQLAAMRAVPIDGP--------SLATRTMVTTSTPGVDI----SQGTMNFSGRPLDVALQQ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 100 DGFFQILMPDGNIAYSRNGQFTLNDEGAIVTSgaGYNLEPE---IVIPPDAiSITVGNDGEVSVRLRGQQNNQV--VGQI 174
Cdd:PRK12643 85 DGYLAVQLPDGSEAYTRNGNIQISANGQMTVQ--GYPLMGDngpIDVPPQA-AVTIAADGTISALNAGDSPNTIaqLGQI 161
|
...
gi 1447671805 175 TTV 177
Cdd:PRK12643 162 KRV 164
|
|
| flgC |
PRK05681 |
flagellar basal body rod protein FlgC; Reviewed |
224-256 |
8.14e-09 |
|
flagellar basal body rod protein FlgC; Reviewed
Pssm-ID: 235556 [Multi-domain] Cd Length: 135 Bit Score: 52.90 E-value: 8.14e-09
10 20 30
....*....|....*....|....*....|...
gi 1447671805 224 NVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256
Cdd:PRK05681 95 NVNVVVEMVDMISASRSYEANVEVLNAAKSMMQ 127
|
|
| FlgC |
COG1558 |
Flagellar basal body rod protein FlgC [Cell motility]; |
223-256 |
1.83e-08 |
|
Flagellar basal body rod protein FlgC [Cell motility];
Pssm-ID: 441166 [Multi-domain] Cd Length: 135 Bit Score: 51.65 E-value: 1.83e-08
10 20 30
....*....|....*....|....*....|....
gi 1447671805 223 SNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256
Cdd:COG1558 95 PNVNVVEEMVDMISASRSYEANVEVINTAKSMLL 128
|
|
| FlgC |
TIGR01395 |
flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components ... |
207-256 |
3.09e-07 |
|
flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components of bacterial flagella that share a domain described by pfam00460. FlgC is part of the basal body. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 130462 [Multi-domain] Cd Length: 135 Bit Score: 48.51 E-value: 3.09e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 1447671805 207 PGLDGLGDVRQSmletsNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256
Cdd:TIGR01395 84 PDADAEGYVKMP-----NVNVVEEMVDMIEASRSYEANVQVFNTAKSMFL 128
|
|
| flgE |
PRK05841 |
flagellar hook protein FlgE; Validated |
1-126 |
7.07e-07 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235620 [Multi-domain] Cd Length: 603 Bit Score: 49.84 E-value: 7.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447671805 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSSQNTKLPSGLMlgAGSKVVATQKv 80
Cdd:PRK05841 1 MNDTLLNAYSGIKTHQFGLDSLSNNIANVNTLGYRSNIPEFKTLFSSHLDALNAKSVVANDRNYGVT--GSSNAISNKD- 77
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1447671805 81 hthGNVQTTTNSLDMMIEGDGFFQilmpdgnIAYSRNGQFTLNDEG 126
Cdd:PRK05841 78 ---GEYKPSDGEFHMAYQGKGWFV-------VGPNKNGSMTINKDG 113
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
212-255 |
5.52e-06 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 47.18 E-value: 5.52e-06
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 1447671805 212 LGDVRQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMM 255
Cdd:COG1256 428 LDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEML 471
|
|
| flgK |
PRK08471 |
flagellar hook-associated protein FlgK; Validated |
215-255 |
3.06e-05 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236270 [Multi-domain] Cd Length: 613 Bit Score: 45.04 E-value: 3.06e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1447671805 215 VRQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMM 255
Cdd:PRK08471 565 VKKEYQSISGVSTDEELVNLIKFQSSYGAAAKIITTIDQML 605
|
|
| flgK_ends |
TIGR02492 |
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ... |
4-81 |
8.16e-05 |
|
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274162 [Multi-domain] Cd Length: 323 Bit Score: 43.10 E-value: 8.16e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1447671805 4 ALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVfedlfyqninqpggQSSQNTKLPSGLMLGAGSKVVATQKVH 81
Cdd:TIGR02492 2 LLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAV--------------LTAVPAGGQGGKQIGTGVKVTSIRRIQ 65
|
|
| flgK |
PRK06665 |
flagellar hook-associated protein FlgK; Validated |
212-258 |
1.05e-04 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180650 [Multi-domain] Cd Length: 627 Bit Score: 43.12 E-value: 1.05e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1447671805 212 LGDVRQSmleTSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMSFV 258
Cdd:PRK06665 578 LEDLRQS---VSGVNLDEELANMIEFQHGYNASARFISVSNELLDTI 621
|
|
| flgC |
PRK12631 |
flagellar basal body rod protein FlgC; Provisional |
224-255 |
1.65e-04 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183636 Cd Length: 138 Bit Score: 40.71 E-value: 1.65e-04
10 20 30
....*....|....*....|....*....|..
gi 1447671805 224 NVNVTEELVNMIEAQRVYEMNSKVISAVDKMM 255
Cdd:PRK12631 99 NVNVMEEMADMISASRSYQMNVQVAEAAKSML 130
|
|
| Flg_bb_rod |
pfam00460 |
Flagella basal body rod protein; |
5-34 |
6.09e-04 |
|
Flagella basal body rod protein;
Pssm-ID: 459821 [Multi-domain] Cd Length: 30 Bit Score: 36.39 E-value: 6.09e-04
10 20 30
....*....|....*....|....*....|
gi 1447671805 5 LWVSKTGLDAQQTNIATISNNLANASTIGF 34
Cdd:pfam00460 1 LYTAVSALNAQQIRLDVIANNIANANTPGY 30
|
|
| flgK |
PRK07191 |
flagellar hook-associated protein FlgK; Validated |
222-256 |
1.19e-03 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180871 [Multi-domain] Cd Length: 456 Bit Score: 39.81 E-value: 1.19e-03
10 20 30
....*....|....*....|....*....|....*
gi 1447671805 222 TSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256
Cdd:PRK07191 416 FSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFS 450
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
4-81 |
1.46e-03 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 39.48 E-value: 1.46e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1447671805 4 ALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVfedlfyqninqpggQSSQNTKLPSGLMLGAGSKVVATQKVH 81
Cdd:COG1256 5 ALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVV--------------LSAAGPTATGAGQVGTGVRVTGIRRIR 68
|
|
| flgC |
PRK12628 |
flagellar basal body rod protein FlgC; Provisional |
201-255 |
2.57e-03 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 79089 Cd Length: 140 Bit Score: 37.51 E-value: 2.57e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 1447671805 201 DPQEGVPGLDGLgdvrqsmLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMM 255
Cdd:PRK12628 85 DPNSPIADKDGF-------VYTSNINYVEEMANIISASRSYQMNIELLNTTKQLM 132
|
|
| flgB |
PRK12623 |
flagellar basal body rod protein FlgB; Provisional |
9-43 |
5.18e-03 |
|
flagellar basal body rod protein FlgB; Provisional
Pssm-ID: 183630 Cd Length: 131 Bit Score: 36.31 E-value: 5.18e-03
10 20 30
....*....|....*....|....*....|....*
gi 1447671805 9 KTGLDAQQTNIATISNNLANASTIGFKKGRAVFED 43
Cdd:PRK12623 17 KKGLDASSYRGKVISNNIANVNTKGYKRHYVTFEE 51
|
|
| flgK |
PRK07739 |
flagellar hook-associated protein FlgK; Validated |
8-42 |
5.26e-03 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236084 [Multi-domain] Cd Length: 507 Bit Score: 37.69 E-value: 5.26e-03
10 20 30
....*....|....*....|....*....|....*
gi 1447671805 8 SKTGLDAQQTNIATISNNLANASTIGFKKGRAVFE 42
Cdd:PRK07739 11 ARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLA 45
|
|
| flgC |
PRK12782 |
flagellar basal body rod protein FlgC; Reviewed |
201-258 |
9.89e-03 |
|
flagellar basal body rod protein FlgC; Reviewed
Pssm-ID: 139220 Cd Length: 138 Bit Score: 35.51 E-value: 9.89e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1447671805 201 DPqeGVPGLDGLGDVRqsmleTSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMSFV 258
Cdd:PRK12782 82 DP--GNPAADENGYVK-----LPNVNMLIEMADMREANRSYEANLQVIKQARAMVAMT 132
|
|
| |
