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Conserved domains on  [gi|1487551487|gb|AYG19697|]
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cation transport regulator ChaB [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

ChaB family protein( domain architecture ID 10008625)

ChaB family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ChaB COG4572
Cation transport regulator ChaB [Inorganic ion transport and metabolism];
1-75 1.67e-37

Cation transport regulator ChaB [Inorganic ion transport and metabolism];


:

Pssm-ID: 443629  Cd Length: 75  Bit Score: 119.73  E-value: 1.67e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1487551487  1 MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDDKWHKK 75
Cdd:COG4572    1 MPYNSPSDLPESVRSHLPEHAQEIFREAFNSAWEEYKDPEDRRGDESREEVAHKVAWAAVKKKYEKDEGGKWSKK 75
 
Name Accession Description Interval E-value
ChaB COG4572
Cation transport regulator ChaB [Inorganic ion transport and metabolism];
1-75 1.67e-37

Cation transport regulator ChaB [Inorganic ion transport and metabolism];


Pssm-ID: 443629  Cd Length: 75  Bit Score: 119.73  E-value: 1.67e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1487551487  1 MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDDKWHKK 75
Cdd:COG4572    1 MPYNSPSDLPESVRSHLPEHAQEIFREAFNSAWEEYKDPEDRRGDESREEVAHKVAWAAVKKKYEKDEGGKWSKK 75
chaB PRK09582
putative cation transport regulator ChaB;
1-76 5.11e-37

putative cation transport regulator ChaB;


Pssm-ID: 181967  Cd Length: 76  Bit Score: 118.51  E-value: 5.11e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1487551487  1 MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDDKWHKKS 76
Cdd:PRK09582   1 MPYKTKSDLPESVKHVLPAHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDDKWHKKS 76
ChaB pfam06150
ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ...
 9-75 1.33e-24

ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ChaB in E. coli and is found next to ChaA which is a cation transporter protein. ChaB may be regulate ChaA function in some way.


Pssm-ID: 428792  Cd Length: 60  Bit Score: 86.54  E-value: 1.33e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1487551487  9 LPESVKHVLPSHAQDIYKEAFNSAWDQYkdkedrrDDASREETAHKVAWAAVKHEYAKGDDDKWHKK 75
Cdd:pfam06150  1 LPETVRRHLPEHAQRIFIEAFNSALEEY-------GDGSDEERAHRVAWAAVKHKYEKDEGGKWEPK 60
 
Name Accession Description Interval E-value
ChaB COG4572
Cation transport regulator ChaB [Inorganic ion transport and metabolism];
1-75 1.67e-37

Cation transport regulator ChaB [Inorganic ion transport and metabolism];


Pssm-ID: 443629  Cd Length: 75  Bit Score: 119.73  E-value: 1.67e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1487551487  1 MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDDKWHKK 75
Cdd:COG4572    1 MPYNSPSDLPESVRSHLPEHAQEIFREAFNSAWEEYKDPEDRRGDESREEVAHKVAWAAVKKKYEKDEGGKWSKK 75
chaB PRK09582
putative cation transport regulator ChaB;
1-76 5.11e-37

putative cation transport regulator ChaB;


Pssm-ID: 181967  Cd Length: 76  Bit Score: 118.51  E-value: 5.11e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1487551487  1 MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDDKWHKKS 76
Cdd:PRK09582   1 MPYKTKSDLPESVKHVLPAHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDDKWHKKS 76
ChaB pfam06150
ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ...
 9-75 1.33e-24

ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ChaB in E. coli and is found next to ChaA which is a cation transporter protein. ChaB may be regulate ChaA function in some way.


Pssm-ID: 428792  Cd Length: 60  Bit Score: 86.54  E-value: 1.33e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1487551487  9 LPESVKHVLPSHAQDIYKEAFNSAWDQYkdkedrrDDASREETAHKVAWAAVKHEYAKGDDDKWHKK 75
Cdd:pfam06150  1 LPETVRRHLPEHAQRIFIEAFNSALEEY-------GDGSDEERAHRVAWAAVKHKYEKDEGGKWEPK 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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