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Conserved domains on  [gi|1551827355|gb|AZY55653|]
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transporter [Bordetella pertussis]

Protein Classification

monovalent cation:proton antiporter-2 (CPA2) family protein( domain architecture ID 1004960)

monovalent cation:proton antiporter-2 (CPA2) family protein such as glutathione-regulated potassium-efflux system protein, which facilitates potassium-efflux, possibly by potassium-proton antiport

Gene Ontology:  GO:0005886|GO:0030001
PubMed:  10092637
TCDB:  2.A.37

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK03562 super family cl35207
glutathione-regulated potassium-efflux system protein KefC; Provisional
6-372 1.82e-111

glutathione-regulated potassium-efflux system protein KefC; Provisional


The actual alignment was detected with superfamily member PRK03562:

Pssm-ID: 235131 [Multi-domain]  Cd Length: 621  Bit Score: 339.66  E-value: 1.82e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   6 ILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFGAG 85
Cdd:PRK03562   12 IYLGAAVLIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDVESILHFAEFGVVLMLFVIGLELDPQRLWKLRRSIFGGG 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  86 TLQMVVCGALLGAVFGAglrhlAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPMLVA 165
Cdd:PRK03562   92 ALQMVACGGLLGLFCML-----LGLRWQVALLIGLGLALSSTAIAMQAMNERNLMVTQMGRSAFAILLFQDIAAIPLVAM 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 166 AGLLGSDGDSAPSFEAALVAVVVVLAC--------YRLR-LLDWAARSQLHELFTAATLLVVLGTAQLFDYAGLSAGLGG 236
Cdd:PRK03562  167 IPLLAASGASTTLGAFALSALKVAGALalvvlggrYVTRpALRFVARSGLREVFTAVALFLVFGFGLLMEEVGLSMALGA 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 237 FLVGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVNVEEALDYWPYVLAGVVALLSLKALVLYGIARLMGLPHYHR 316
Cdd:PRK03562  247 FLAGVLLASSEYRHALESDIEPFKGLLLGLFFIAVGMSIDFGTLLENPLRILILLLGFLAIKIAMLWLLARPLGVPRKQR 326
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1551827355 317 LLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLLERL 372
Cdd:PRK03562  327 RWFAVLLGQGGEFAFVVFGAAQMANVLEPEWAKLLTLAVALSMAATPLLLVLLDRL 382
 
Name Accession Description Interval E-value
PRK03562 PRK03562
glutathione-regulated potassium-efflux system protein KefC; Provisional
6-372 1.82e-111

glutathione-regulated potassium-efflux system protein KefC; Provisional


Pssm-ID: 235131 [Multi-domain]  Cd Length: 621  Bit Score: 339.66  E-value: 1.82e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   6 ILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFGAG 85
Cdd:PRK03562   12 IYLGAAVLIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDVESILHFAEFGVVLMLFVIGLELDPQRLWKLRRSIFGGG 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  86 TLQMVVCGALLGAVFGAglrhlAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPMLVA 165
Cdd:PRK03562   92 ALQMVACGGLLGLFCML-----LGLRWQVALLIGLGLALSSTAIAMQAMNERNLMVTQMGRSAFAILLFQDIAAIPLVAM 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 166 AGLLGSDGDSAPSFEAALVAVVVVLAC--------YRLR-LLDWAARSQLHELFTAATLLVVLGTAQLFDYAGLSAGLGG 236
Cdd:PRK03562  167 IPLLAASGASTTLGAFALSALKVAGALalvvlggrYVTRpALRFVARSGLREVFTAVALFLVFGFGLLMEEVGLSMALGA 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 237 FLVGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVNVEEALDYWPYVLAGVVALLSLKALVLYGIARLMGLPHYHR 316
Cdd:PRK03562  247 FLAGVLLASSEYRHALESDIEPFKGLLLGLFFIAVGMSIDFGTLLENPLRILILLLGFLAIKIAMLWLLARPLGVPRKQR 326
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1551827355 317 LLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLLERL 372
Cdd:PRK03562  327 RWFAVLLGQGGEFAFVVFGAAQMANVLEPEWAKLLTLAVALSMAATPLLLVLLDRL 382
KefB COG0475
Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism]; ...
4-375 7.86e-81

Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism];


Pssm-ID: 440243 [Multi-domain]  Cd Length: 384  Bit Score: 253.15  E-value: 7.86e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   4 LTILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFG 83
Cdd:COG0475     9 LGLLLLAAVLAGLLARRLGLPSVLGYILAGILLGPSGLGLIEDSEALELLAELGVVLLLFLIGLELDLKRLRKMGRRALG 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  84 AGTLQMVVCGALLGAVFgaglrHLAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPML 163
Cdd:COG0475    89 IGLLQVLLPFLLGFLLA-----LLLGLSLAAALFLGAALAATSTAIVLKVLKELGLLKTPLGQLILGVALFDDIAAILLL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 164 -VAAGLLGSDGDSAPSFEAALVAVVVVLACYRL------RLLDWAARSQLHELFTAATLLVVLGTAQLFDYAGLSAGLGG 236
Cdd:COG0475   164 aLVPALAGGGSVAGSLLLALLKALLFLALLLLVgryllrRLFRLVARTRSRELFLLFALLLVLLAAALAELLGLSAALGA 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 237 FLVGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVNVEEALDYWPYVLAGVVALLSLKALVLYGIARLMGLPHYHR 316
Cdd:COG0475   244 FLAGLVLAESEYRHELEEKIEPFGDLFLPLFFVSVGLSLDLSALLSNPLLALLLVLAAIVGKLLGAYLAARLFGLSRREA 323
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1551827355 317 LLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLLERLPGR 375
Cdd:COG0475   324 LRIGLLLAPRGEFALVLASLGLSAGLISPELFAALVLVVLLTTLLTPLLLRLALRLAER 382
2a37 TIGR00932
transporter, monovalent cation:proton antiporter-2 (CPA2) family; [Transport and binding ...
8-276 6.59e-59

transporter, monovalent cation:proton antiporter-2 (CPA2) family; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273348 [Multi-domain]  Cd Length: 273  Bit Score: 193.25  E-value: 6.59e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   8 LIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFGAGTL 87
Cdd:TIGR00932   1 LLAAVLAVPLSRRLGIPSVLGYLLAGVLIGPSGLGLISNVEGVNHLAEFGVILLMFLIGLELDLERLWKLRKAAFGVGVL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  88 QMVVCGALLgavfGAGLRHLAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPMLVAAG 167
Cdd:TIGR00932  81 QVLVPGVLL----GLLLGHLLGLALGAAVVIGIILALSSTAVVVQVLKERGLLKTPFGQTVLGILLFQDIAVVPLLALLP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 168 LLGSdGDSAPSFEAALVAVVVVLACYRLRLL---------DWAARSQLHELFTAATLLVVLGTAQLFDYAGLSAGLGGFL 238
Cdd:TIGR00932 157 LLAT-SASTEHVALALLLLKVFLAFLLLVLLgrwllrpvlRLTAELRPSELFTAGSLLLMFGSAYFADLLGLSMALGAFL 235
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1551827355 239 VGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVN 276
Cdd:TIGR00932 236 AGVVLSESEYRHKLESDLEPIGGVLLPLFFISVGMSVD 273
Na_H_Exchanger pfam00999
Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH ...
4-369 2.82e-38

Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.


Pssm-ID: 425982 [Multi-domain]  Cd Length: 377  Bit Score: 141.62  E-value: 2.82e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   4 LTILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRV-SEWGVVMMLFVIGLELAPKRLWAMRREVF 82
Cdd:pfam00999   1 IVLLILLALLAPLLARRLKLPPIVGLIIAGILLGPSGLGLISEVDEDLEVlSNLGLPPLLFLAGLELDLRELRKNGGSIL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  83 GAGTLQMVVCGALLGAVFGAGLrhlAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPM 162
Cdd:pfam00999  81 LLALLGVLIPFVLIGLLLYLLG---LGIPLLEALLFGAILSATSPVVVLAILKELGRVPERLGTLLLGESVLNDGVAVVL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 163 L-VAAGLLGSDGDSAPSFEAALVAVVVVLACYRLRLLDW-------AARSQLHELFTAATLLVVLGTAQLFDYAGLSAGL 234
Cdd:pfam00999 158 LaVLLALAQGVGGGSDLGWLLLIFLVVAVGGLLLGLLIGwllrlitRFTDDDRELEVLLVLLLALLAALLAEALGVSGIL 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 235 GGFLVGMLLAESRHRNELEHTIEPFKGLLLGLFF-LAVGMSVNVEE-ALDYWPYVLAGVVALLSLKALVLYGIARLMGLP 312
Cdd:pfam00999 238 GAFLAGLVLSEYPFANKLSEKLEPFGYGLFNPLFfVLVGLSLDLSSlLLSVWILVLLALVAILLGRFLGVFLLLRLLGLS 317
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1551827355 313 HYHRLLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLL 369
Cdd:pfam00999 318 LREALIIGFGGLQRGAVSLALAAIGPLLGIIARELYPLLIVVVLFTVLVQGITLKPL 374
 
Name Accession Description Interval E-value
PRK03562 PRK03562
glutathione-regulated potassium-efflux system protein KefC; Provisional
6-372 1.82e-111

glutathione-regulated potassium-efflux system protein KefC; Provisional


Pssm-ID: 235131 [Multi-domain]  Cd Length: 621  Bit Score: 339.66  E-value: 1.82e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   6 ILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFGAG 85
Cdd:PRK03562   12 IYLGAAVLIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDVESILHFAEFGVVLMLFVIGLELDPQRLWKLRRSIFGGG 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  86 TLQMVVCGALLGAVFGAglrhlAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPMLVA 165
Cdd:PRK03562   92 ALQMVACGGLLGLFCML-----LGLRWQVALLIGLGLALSSTAIAMQAMNERNLMVTQMGRSAFAILLFQDIAAIPLVAM 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 166 AGLLGSDGDSAPSFEAALVAVVVVLAC--------YRLR-LLDWAARSQLHELFTAATLLVVLGTAQLFDYAGLSAGLGG 236
Cdd:PRK03562  167 IPLLAASGASTTLGAFALSALKVAGALalvvlggrYVTRpALRFVARSGLREVFTAVALFLVFGFGLLMEEVGLSMALGA 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 237 FLVGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVNVEEALDYWPYVLAGVVALLSLKALVLYGIARLMGLPHYHR 316
Cdd:PRK03562  247 FLAGVLLASSEYRHALESDIEPFKGLLLGLFFIAVGMSIDFGTLLENPLRILILLLGFLAIKIAMLWLLARPLGVPRKQR 326
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1551827355 317 LLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLLERL 372
Cdd:PRK03562  327 RWFAVLLGQGGEFAFVVFGAAQMANVLEPEWAKLLTLAVALSMAATPLLLVLLDRL 382
PRK03659 PRK03659
glutathione-regulated potassium-efflux system protein KefB; Provisional
5-386 1.21e-109

glutathione-regulated potassium-efflux system protein KefB; Provisional


Pssm-ID: 179625 [Multi-domain]  Cd Length: 601  Bit Score: 334.30  E-value: 1.21e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   5 TILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFGA 84
Cdd:PRK03659   11 VLFLFAAVVAVPLAQRLGIGAVLGYLLAGIAIGPWGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  85 GTLQMVVCGALLGavfgaGLRHLAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPMLV 164
Cdd:PRK03659   91 GAAQVLLSAAVLA-----GLLMLTDFSWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAVIPALA 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 165 AAGLLGSDGDSAPSFEAALVAVVVVLAC-----YRLR-LLDWAARSQLHELFTAATLLVVLGTAQLFDYAGLSAGLGGFL 238
Cdd:PRK03659  166 LVPLLAGSADEHFDWMKIGMKVLAFAGMliggrYLLRpLFRFIAASGVREVFTAAALLLVLGSALFMDALGLSMALGTFI 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 239 VGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVNVEEALDYWPYVLAGVVALLSLKALVLYGIARLMGLPHYHRLL 318
Cdd:PRK03659  246 AGVLLAESEYRHELEIAIEPFKGLLLGLFFISVGMALNLGVLYTHLLWVLISVVVLVAVKGLVLYLLARLYGLRSSERMQ 325
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1551827355 319 YALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLLER-LPGRYGGIGDMAVTP 386
Cdd:PRK03659  326 FAGVLSQGGEFAFVLFSAASSQRLLQGDQMALLLVVVTLSMMTTPLLMKLIDKwLARRLNGPEEEDEKP 394
KefB COG0475
Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism]; ...
4-375 7.86e-81

Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism];


Pssm-ID: 440243 [Multi-domain]  Cd Length: 384  Bit Score: 253.15  E-value: 7.86e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   4 LTILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFG 83
Cdd:COG0475     9 LGLLLLAAVLAGLLARRLGLPSVLGYILAGILLGPSGLGLIEDSEALELLAELGVVLLLFLIGLELDLKRLRKMGRRALG 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  84 AGTLQMVVCGALLGAVFgaglrHLAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPML 163
Cdd:COG0475    89 IGLLQVLLPFLLGFLLA-----LLLGLSLAAALFLGAALAATSTAIVLKVLKELGLLKTPLGQLILGVALFDDIAAILLL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 164 -VAAGLLGSDGDSAPSFEAALVAVVVVLACYRL------RLLDWAARSQLHELFTAATLLVVLGTAQLFDYAGLSAGLGG 236
Cdd:COG0475   164 aLVPALAGGGSVAGSLLLALLKALLFLALLLLVgryllrRLFRLVARTRSRELFLLFALLLVLLAAALAELLGLSAALGA 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 237 FLVGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVNVEEALDYWPYVLAGVVALLSLKALVLYGIARLMGLPHYHR 316
Cdd:COG0475   244 FLAGLVLAESEYRHELEEKIEPFGDLFLPLFFVSVGLSLDLSALLSNPLLALLLVLAAIVGKLLGAYLAARLFGLSRREA 323
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1551827355 317 LLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLLERLPGR 375
Cdd:COG0475   324 LRIGLLLAPRGEFALVLASLGLSAGLISPELFAALVLVVLLTTLLTPLLLRLALRLAER 382
RosB COG4651
Predicted Kef-type K+ transport protein, K+/H+ antiporter domain [Inorganic ion transport and ...
4-375 1.43e-68

Predicted Kef-type K+ transport protein, K+/H+ antiporter domain [Inorganic ion transport and metabolism];


Pssm-ID: 443689 [Multi-domain]  Cd Length: 564  Bit Score: 226.78  E-value: 1.43e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   4 LTILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFG 83
Cdd:COG4651    10 IALILGLAAVLGLLAQRLRQPPIVGYLLAGVLIGPFTPGLVADVELIEQLAEIGVILLLFGVGLEFSLKDLLAVRKIALP 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  84 AGTLQMVvcgalLGAVFGAGLRHLAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPML 163
Cdd:COG4651    90 GALLQIA-----LTTLLGFGIALLLGWSLGESLVFGLALSLSSTVVLLKLLEDRGELDTLHGRIAVGWLIVQDLAVVLML 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 164 VAAGLLGSDGDSAPS------FEAALVAVVVVLACYRL--RLLDWAARSQLHELFTAATLLVVLGTAQLFDYAGLSAGLG 235
Cdd:COG4651   165 VLLPALAGGGGGLLGtlgltlLKVALFVALMLVVGRRVipWLLHRVARTRSRELFLLAVLAICLGVAYLAALFGLSFALG 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 236 GFLVGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVNVEEALDYWPYVLAGVVALLSLKALVLYGIARLMGLPHYH 315
Cdd:COG4651   245 AFLAGMVLAESEYSHQAAAELLPLRDAFAVLFFVSVGMLFDPSFLLENPLPVLALLLIVLIGKPLIAFLIVLALGYPLRT 324
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 316 RLLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLLERLPGR 375
Cdd:COG4651   325 ALLVGLSLAQIGEFSFILAALGLSLGLLSEEAYQLILAVAILTIALSPYLIALADPLYAR 384
2a37 TIGR00932
transporter, monovalent cation:proton antiporter-2 (CPA2) family; [Transport and binding ...
8-276 6.59e-59

transporter, monovalent cation:proton antiporter-2 (CPA2) family; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273348 [Multi-domain]  Cd Length: 273  Bit Score: 193.25  E-value: 6.59e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   8 LIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFGAGTL 87
Cdd:TIGR00932   1 LLAAVLAVPLSRRLGIPSVLGYLLAGVLIGPSGLGLISNVEGVNHLAEFGVILLMFLIGLELDLERLWKLRKAAFGVGVL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  88 QMVVCGALLgavfGAGLRHLAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPMLVAAG 167
Cdd:TIGR00932  81 QVLVPGVLL----GLLLGHLLGLALGAAVVIGIILALSSTAVVVQVLKERGLLKTPFGQTVLGILLFQDIAVVPLLALLP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 168 LLGSdGDSAPSFEAALVAVVVVLACYRLRLL---------DWAARSQLHELFTAATLLVVLGTAQLFDYAGLSAGLGGFL 238
Cdd:TIGR00932 157 LLAT-SASTEHVALALLLLKVFLAFLLLVLLgrwllrpvlRLTAELRPSELFTAGSLLLMFGSAYFADLLGLSMALGAFL 235
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1551827355 239 VGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVN 276
Cdd:TIGR00932 236 AGVVLSESEYRHKLESDLEPIGGVLLPLFFISVGMSVD 273
Na_H_Exchanger pfam00999
Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH ...
4-369 2.82e-38

Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.


Pssm-ID: 425982 [Multi-domain]  Cd Length: 377  Bit Score: 141.62  E-value: 2.82e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   4 LTILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRV-SEWGVVMMLFVIGLELAPKRLWAMRREVF 82
Cdd:pfam00999   1 IVLLILLALLAPLLARRLKLPPIVGLIIAGILLGPSGLGLISEVDEDLEVlSNLGLPPLLFLAGLELDLRELRKNGGSIL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  83 GAGTLQMVVCGALLGAVFGAGLrhlAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPM 162
Cdd:pfam00999  81 LLALLGVLIPFVLIGLLLYLLG---LGIPLLEALLFGAILSATSPVVVLAILKELGRVPERLGTLLLGESVLNDGVAVVL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 163 L-VAAGLLGSDGDSAPSFEAALVAVVVVLACYRLRLLDW-------AARSQLHELFTAATLLVVLGTAQLFDYAGLSAGL 234
Cdd:pfam00999 158 LaVLLALAQGVGGGSDLGWLLLIFLVVAVGGLLLGLLIGwllrlitRFTDDDRELEVLLVLLLALLAALLAEALGVSGIL 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 235 GGFLVGMLLAESRHRNELEHTIEPFKGLLLGLFF-LAVGMSVNVEE-ALDYWPYVLAGVVALLSLKALVLYGIARLMGLP 312
Cdd:pfam00999 238 GAFLAGLVLSEYPFANKLSEKLEPFGYGLFNPLFfVLVGLSLDLSSlLLSVWILVLLALVAILLGRFLGVFLLLRLLGLS 317
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1551827355 313 HYHRLLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLL 369
Cdd:pfam00999 318 LREALIIGFGGLQRGAVSLALAAIGPLLGIIARELYPLLIVVVLFTVLVQGITLKPL 374
PRK10669 PRK10669
putative cation:proton antiport protein; Provisional
8-371 8.43e-27

putative cation:proton antiport protein; Provisional


Pssm-ID: 182633 [Multi-domain]  Cd Length: 558  Bit Score: 112.11  E-value: 8.43e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   8 LIAAVLCVPLAQRLGLGAIPGYLLAGGVIGPSGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRREVFGAGTL 87
Cdd:PRK10669   15 LVLAFILGMLANRLRISPLVGYLLAGVLAGPFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKSIAIPGAIA 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  88 QMVVCGALlgavfGAGLRHLAGMGWQAAILCGLSLALSSTAVALRLLEERGLVRTPLGRSALGVLLLQDMAAIPMLV--- 164
Cdd:PRK10669   95 QIAVATLL-----GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVllp 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 165 -AAGLLGSDGDSAPSFEAALVAVVVVLACYRL-------RLLDW----AARSQLHELFTAATLLVVLGTA----QLFDya 228
Cdd:PRK10669  170 aVAGMMEQGDVGFATLAVDLGITIGKVIAFIAimmlvgrRLVPWilarSAATGSRELFTLSVLALALGIAfgavELFD-- 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355 229 gLSAGLGGFLVGMLLAESRHRNELEHTIEPFKGLLLGLFFLAVGMSVNVEEALDYWPYVLAGVVALLSLKALVLYGIARL 308
Cdd:PRK10669  248 -VSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMILIQQPLAVLATLAIIVFGKSLAAFFLVRL 326
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1551827355 309 MGLPHYHRLLYALVLAQGGEFSFVIFNEAWDNHLMSLEQRDLLAIVVAISMGAVPIVIRLLER 371
Cdd:PRK10669  327 FGHSRRTALTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFTLLER 389
NhaP COG0025
NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism];
1-139 4.73e-08

NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism];


Pssm-ID: 439796 [Multi-domain]  Cd Length: 506  Bit Score: 54.97  E-value: 4.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355   1 MELLTILLIAAVLCVPLAQRLGLGAIPGYLLAGGVIGP-SGLGLVTDVPDIMRVSEWGVVMMLFVIGLELAPKRLWAMRR 79
Cdd:COG0025     4 LLLILLLLLLGLLSQWLARRLKLPAPLLLLLAGILLGPgLGLELDPELGDLEPLLELFLPPLLFEAALNLDLRELRRNGR 83
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  80 EVFGAGTLQMVVCGALLGAVfgagLRHLAGMGWQAAILCGLSLALSSTAVALRLLEERGL 139
Cdd:COG0025    84 PILRLAVVGVLLTTLAVALA----AHWLLGLPLAAALLLGAILAPTDPVAVSPILRRLGV 139
PLN03159 PLN03159
cation/H(+) antiporter 15; Provisional
30-166 1.41e-04

cation/H(+) antiporter 15; Provisional


Pssm-ID: 215608 [Multi-domain]  Cd Length: 832  Bit Score: 44.11  E-value: 1.41e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1551827355  30 LLAGGVIGPSGLGLVT----------DVPDIMRVSEWGVVMMLFVIGLELapkRLWAMRREvfGAGTLQMVVCGALL--- 96
Cdd:PLN03159   74 ILGGVILGPSVLGQSEvfantifplrSVMVLETMANLGLLYFLFLVGVEM---DISVIRRT--GKKALAIAIAGMALpfc 148
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1551827355  97 -GAVFGAGLRHLAGMGWQAAILCGLSLALSSTA--VALRLLEERGLVRTPLGRSALGVLLLQDMAAIPMLVAA 166
Cdd:PLN03159  149 iGLAFSFIFHQVSRNVHQGTFILFLGVALSVTAfpVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALA 221
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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