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Conserved domains on  [gi|220564|dbj|BAA00877|]
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PC4 [Mus musculus]

Protein Classification

S8 family peptidase( domain architecture ID 11242990)

S8 family peptidase is a subtilisin-like serine protease containing an Asp/His/Ser catalytic triad that is not homologous to trypsin; similar to human neuroendocrine convertase 2 that is involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues

CATH:  3.40.50.200
EC:  3.4.-.-
Gene Ontology:  GO:0006508|GO:0004252
MEROPS:  S8
PubMed:  8439290|9070434
SCOP:  3000226

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
115-404 7.02e-166

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


:

Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 476.28  E-value: 7.02e-166
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   115 PTDPWFSKQWYMNKEIQQ------DLNILKAWNQGLTGRGVVISILDDGIEKDHPDLWANYDPLASYDFNDYDPDPQPRY 188
Cdd:cd04059   1 PNDPLFPYQWYLKNTGQAggtpglDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   189 tpNDENRHGTRCAGEVSATANNGFCGAGVAFNARIGGVRMLDGAITDIVEAQSLSLQPQHIHIYSASWGPEDDGRTVDGP 268
Cdd:cd04059  81 --DDDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   269 GLLTQEAFRRGVTKGRQGLGTLFIWASGNGGLHYDNCNCDGYTNSIHTLSVGSTTRQGRVPWYSEACASTFTTTFSSGVV 348
Cdd:cd04059 159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSG 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 220564   349 T-DPQIVTTDLH--HQCTDKHTGTSASAPLAAGMIALALEANPLLTWRDLQHLVVRASR 404
Cdd:cd04059 239 NpEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
34-110 4.51e-31

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


:

Pssm-ID: 465126  Cd Length: 77  Bit Score: 115.78  E-value: 4.51e-31
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 220564      34 SWAVRVTKGYQEAERLARKFGFVNLGQIFPDDQYFHLRHRGVAQQSLTPHWGHRLRLKKDPKVRWFEQQTLRRRVKR 110
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGLEDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
488-553 2.26e-26

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


:

Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 102.73  E-value: 2.26e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 220564     488 LEHVQVQLSLSYSRRGDLEIFLTSPMGTRSTLVAIRPLDISGQGYNNWIFMSTHYWDEDPQGLWTL 553
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTL 66
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
115-404 7.02e-166

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 476.28  E-value: 7.02e-166
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   115 PTDPWFSKQWYMNKEIQQ------DLNILKAWNQGLTGRGVVISILDDGIEKDHPDLWANYDPLASYDFNDYDPDPQPRY 188
Cdd:cd04059   1 PNDPLFPYQWYLKNTGQAggtpglDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   189 tpNDENRHGTRCAGEVSATANNGFCGAGVAFNARIGGVRMLDGAITDIVEAQSLSLQPQHIHIYSASWGPEDDGRTVDGP 268
Cdd:cd04059  81 --DDDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   269 GLLTQEAFRRGVTKGRQGLGTLFIWASGNGGLHYDNCNCDGYTNSIHTLSVGSTTRQGRVPWYSEACASTFTTTFSSGVV 348
Cdd:cd04059 159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSG 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 220564   349 T-DPQIVTTDLH--HQCTDKHTGTSASAPLAAGMIALALEANPLLTWRDLQHLVVRASR 404
Cdd:cd04059 239 NpEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
146-429 3.19e-62

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 208.47  E-value: 3.19e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     146 GRGVVISILDDGIEKDHPDLWANYDPLASYDFNDYD----PDPQPRYTPNDENRHGTRCAGEVSATANNGFCGAGVAFNA 221
Cdd:pfam00082   1 GKGVVVAVLDTGIDPNHPDLSGNLDNDPSDDPEASVdfnnEWDDPRDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     222 RIGGVRML-DGAITDIVEAQSLS-LQPQHIHIYSASWGPEddgRTVDGPGLLTQEAFRRGvtkGRQGLGTLFIWASGNGG 299
Cdd:pfam00082  81 KILGVRVFgDGGGTDAITAQAISwAIPQGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     300 LHYDNCNCDGY-TNSIHTLSVGSTTRqgrvpwYSEACASTFTTT-------------------FSSGVVTDPQIVTTDLH 359
Cdd:pfam00082 155 PGGNNGSSVGYpAQYKNVIAVGAVDE------ASEGNLASFSSYgptldgrlkpdivapggniTGGNISSTLLTTTSDPP 228
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     360 HQCTDKHTGTSASAPLAAGMIALALEANPLLTWRDLQHLVVRASRPAQLQAEDwringvgrqvsHHYGYG 429
Cdd:pfam00082 229 NQGYDSMSGTSMATPHVAGAAALLKQAYPNLTPETLKALLVNTATDLGDAGLD-----------RLFGYG 287
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
87-434 2.52e-39

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 150.63  E-value: 2.52e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564    87 RLRLKKDPKVRWFEQQTLRRRVKRSLVVPTDPWFSKQWYMNKEIQQDLNILKAWNQ--GLTGRGVVISILDDGIEKDHPD 164
Cdd:COG1404  47 ALVAAAAAAAVAAALAAPLAPAALAAPAPLPVPAAAPAAVRAAQAALLAAAAAGSSaaGLTGAGVTVAVIDTGVDADHPD 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   165 LWANYdpLASYDFNDYDPDPqprytpNDENRHGTRCAGEVSATANNGFCGAGVAFNARIGGVRMLD----GAITDIVEAQ 240
Cdd:COG1404 127 LAGRV--VGGYDFVDGDGDP------SDDNGHGTHVAGIIAANGNNGGGVAGVAPGAKLLPVRVLDdngsGTTSDIAAAI 198
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   241 SLSLQpQHIHIYSASWGpeddgrtvdGPGLLTQEAFRRGVTKGRQgLGTLFIWASGNGGlhyDNCNCDGYTNSI-HTLSV 319
Cdd:COG1404 199 DWAAD-NGADVINLSLG---------GPADGYSDALAAAVDYAVD-KGVLVVAAAGNSG---SDDATVSYPAAYpNVIAV 264
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   320 GSTTRQGRVPWYSeacastftttfSSGVVTD---P--QIVTTDLHHQcTDKHTGTSASAPLAAGMIALALEANPLLTWRD 394
Cdd:COG1404 265 GAVDANGQLASFS-----------NYGPKVDvaaPgvDILSTYPGGG-YATLSGTSMAAPHVAGAAALLLSANPDLTPAQ 332
                       330       340       350       360
                ....*....|....*....|....*....|....*....|
gi 220564   395 LQHLVVRASRPAQLQaedwringvgrqvSHHYGYGLLDAG 434
Cdd:COG1404 333 VRAILLNTATPLGAP-------------GPYYGYGLLADG 359
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
34-110 4.51e-31

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 115.78  E-value: 4.51e-31
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 220564      34 SWAVRVTKGYQEAERLARKFGFVNLGQIFPDDQYFHLRHRGVAQQSLTPHWGHRLRLKKDPKVRWFEQQTLRRRVKR 110
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGLEDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
488-553 2.26e-26

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 102.73  E-value: 2.26e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 220564     488 LEHVQVQLSLSYSRRGDLEIFLTSPMGTRSTLVAIRPLDISGQGYNNWIFMSTHYWDEDPQGLWTL 553
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTL 66
T7SS_mycosin TIGR03921
type VII secretion-associated serine protease mycosin; Members of this family are ...
134-466 4.95e-11

type VII secretion-associated serine protease mycosin; Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair]


Pssm-ID: 274856 [Multi-domain]  Cd Length: 350  Bit Score: 64.65  E-value: 4.95e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     134 LNILKAWnQGLTGRGVVISILDDGIEkDHPDLWANYDPLASYdFNDYDpdpqpryTPNDENRHGTRCAGEVSATANNGFC 213
Cdd:TIGR03921   1 LSLEQAW-KFSTGAGVTVAVIDTGVD-DHPRLPGLVLPGGDF-VGSGD-------GTDDCDGHGTLVAGIIAGRPGEGDG 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     214 GAGVAFNARIGGVRMLD------------GAITDIVEA--QSLSLQPQHIHIYSASWGPEddGRTVDGPGLltQEAFRRG 279
Cdd:TIGR03921  71 FSGVAPDARILPIRQTSaafepdegtsgvGDLGTLAKAirRAADLGADVINISLVACLPA--GSGADDPEL--GAAVRYA 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     280 VTKgrqglGTLFIWASGNGGlhyDNCNCDGYTNSIHT---LSVGSTTRQGRvpwyseacASTFTTTFSSGVVTDP--QIV 354
Cdd:TIGR03921 147 LDK-----GVVVVAAAGNTG---GDGQKTTVVYPAWYpgvLAVGSIDRDGT--------PSSFSLPGPWVDLAAPgeNIV 210
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     355 TTDLHHQCTDKHTGTSASAPLAAGMIALALEANPLLTWRDLQH-LVVRASRPAqlqaedwrinGVGRQVShhYGYGLLD- 432
Cdd:TIGR03921 211 SLSPGGDGLATTSGTSFAAPFVSGTAALVRSRFPDLTAAQVRRrIEATADHPA----------RGGRDDY--VGYGVVDp 278
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 220564     433 -AGLLVDLARVWLPTKPQKKCAIRVVHTPTPILPR 466
Cdd:TIGR03921 279 vAALTGELPPEDGRPLRPAPAPARPVAAPAPPPPP 313
COG4935 COG4935
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ...
489-553 2.50e-07

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443962 [Multi-domain]  Cd Length: 641  Bit Score: 54.06  E-value: 2.50e-07
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 220564   489 EHVQVQLSLSYSRRGDLEIFLTSPMGTRSTLvaIRPLDISGQGYnNWIFMSTHYWDEDPQGLWTL 553
Cdd:COG4935 558 EDVTVTVDITHTYRGDLVITLISPDGTTVVL--KNRSGGSADNI-NATFDVANFSGESANGTWTL 619
PTZ00262 PTZ00262
subtilisin-like protease; Provisional
151-414 1.07e-04

subtilisin-like protease; Provisional


Pssm-ID: 240338 [Multi-domain]  Cd Length: 639  Bit Score: 45.34  E-value: 1.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564    151 ISILDDGIEKDHPDLWANY---------------------DPLASYDFNDYDPDPQprytpnDENRHGTRCAGEVSATAN 209
Cdd:PTZ00262 320 ICVIDSGIDYNHPDLHDNIdvnvkelhgrkgidddnngnvDDEYGANFVNNDGGPM------DDNYHGTHVSGIISAIGN 393
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564    210 NGFCGAGVAFNARIGGVRMLD----GAITDIVEAQSLSLQpQHIHIYSASWgpeddgrTVDGPGLLTQEAFrrgvtKGRQ 285
Cdd:PTZ00262 394 NNIGIVGVDKRSKLIICKALDshklGRLGDMFKCFDYCIS-REAHMINGSF-------SFDEYSGIFNESV-----KYLE 460
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564    286 GLGTLFIWASGN------GGLHYDNCNCD-------GYTNSIHTLSVGSTTRQGRVPWYSEACASTFTTTFSSGVVTDPQ 352
Cdd:PTZ00262 461 EKGILFVVSASNcshtkeSKPDIPKCDLDvnkvyppILSKKLRNVITVSNLIKDKNNQYSLSPNSFYSAKYCQLAAPGTN 540
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 220564    353 IVTTDLHHQCTdKHTGTSASAPLAAGMIALALEANPLLTWRDlqhlVVRASRPAQLQAEDWR 414
Cdd:PTZ00262 541 IYSTFPKNSYR-KLNGTSMAAPHVAAIASLILSINPSLSYEE----VIRILKESIVQLPSLK 597
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
115-404 7.02e-166

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 476.28  E-value: 7.02e-166
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   115 PTDPWFSKQWYMNKEIQQ------DLNILKAWNQGLTGRGVVISILDDGIEKDHPDLWANYDPLASYDFNDYDPDPQPRY 188
Cdd:cd04059   1 PNDPLFPYQWYLKNTGQAggtpglDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   189 tpNDENRHGTRCAGEVSATANNGFCGAGVAFNARIGGVRMLDGAITDIVEAQSLSLQPQHIHIYSASWGPEDDGRTVDGP 268
Cdd:cd04059  81 --DDDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   269 GLLTQEAFRRGVTKGRQGLGTLFIWASGNGGLHYDNCNCDGYTNSIHTLSVGSTTRQGRVPWYSEACASTFTTTFSSGVV 348
Cdd:cd04059 159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSG 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 220564   349 T-DPQIVTTDLH--HQCTDKHTGTSASAPLAAGMIALALEANPLLTWRDLQHLVVRASR 404
Cdd:cd04059 239 NpEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
146-429 3.19e-62

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 208.47  E-value: 3.19e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     146 GRGVVISILDDGIEKDHPDLWANYDPLASYDFNDYD----PDPQPRYTPNDENRHGTRCAGEVSATANNGFCGAGVAFNA 221
Cdd:pfam00082   1 GKGVVVAVLDTGIDPNHPDLSGNLDNDPSDDPEASVdfnnEWDDPRDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     222 RIGGVRML-DGAITDIVEAQSLS-LQPQHIHIYSASWGPEddgRTVDGPGLLTQEAFRRGvtkGRQGLGTLFIWASGNGG 299
Cdd:pfam00082  81 KILGVRVFgDGGGTDAITAQAISwAIPQGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     300 LHYDNCNCDGY-TNSIHTLSVGSTTRqgrvpwYSEACASTFTTT-------------------FSSGVVTDPQIVTTDLH 359
Cdd:pfam00082 155 PGGNNGSSVGYpAQYKNVIAVGAVDE------ASEGNLASFSSYgptldgrlkpdivapggniTGGNISSTLLTTTSDPP 228
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     360 HQCTDKHTGTSASAPLAAGMIALALEANPLLTWRDLQHLVVRASRPAQLQAEDwringvgrqvsHHYGYG 429
Cdd:pfam00082 229 NQGYDSMSGTSMATPHVAGAAALLKQAYPNLTPETLKALLVNTATDLGDAGLD-----------RLFGYG 287
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
87-434 2.52e-39

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 150.63  E-value: 2.52e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564    87 RLRLKKDPKVRWFEQQTLRRRVKRSLVVPTDPWFSKQWYMNKEIQQDLNILKAWNQ--GLTGRGVVISILDDGIEKDHPD 164
Cdd:COG1404  47 ALVAAAAAAAVAAALAAPLAPAALAAPAPLPVPAAAPAAVRAAQAALLAAAAAGSSaaGLTGAGVTVAVIDTGVDADHPD 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   165 LWANYdpLASYDFNDYDPDPqprytpNDENRHGTRCAGEVSATANNGFCGAGVAFNARIGGVRMLD----GAITDIVEAQ 240
Cdd:COG1404 127 LAGRV--VGGYDFVDGDGDP------SDDNGHGTHVAGIIAANGNNGGGVAGVAPGAKLLPVRVLDdngsGTTSDIAAAI 198
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   241 SLSLQpQHIHIYSASWGpeddgrtvdGPGLLTQEAFRRGVTKGRQgLGTLFIWASGNGGlhyDNCNCDGYTNSI-HTLSV 319
Cdd:COG1404 199 DWAAD-NGADVINLSLG---------GPADGYSDALAAAVDYAVD-KGVLVVAAAGNSG---SDDATVSYPAAYpNVIAV 264
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   320 GSTTRQGRVPWYSeacastftttfSSGVVTD---P--QIVTTDLHHQcTDKHTGTSASAPLAAGMIALALEANPLLTWRD 394
Cdd:COG1404 265 GAVDANGQLASFS-----------NYGPKVDvaaPgvDILSTYPGGG-YATLSGTSMAAPHVAGAAALLLSANPDLTPAQ 332
                       330       340       350       360
                ....*....|....*....|....*....|....*....|
gi 220564   395 LQHLVVRASRPAQLQaedwringvgrqvSHHYGYGLLDAG 434
Cdd:COG1404 333 VRAILLNTATPLGAP-------------GPYYGYGLLADG 359
Peptidases_S8_15 cd07498
Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the ...
149-395 9.42e-34

Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173822 [Multi-domain]  Cd Length: 242  Bit Score: 129.38  E-value: 9.42e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   149 VVISILDDGIEKDHPDLWANYDPLASydFNDYDPDpqprYTPNDENRHGTRCAGEVSATANNGFCGAGVAFNARIGGVRM 228
Cdd:cd07498   1 VVVAIIDTGVDLNHPDLSGKPKLVPG--WNFVSNN----DPTSDIDGHGTACAGVAAAVGNNGLGVAGVAPGAKLMPVRI 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   229 LD--GAITDIVEAQSLSLQPQH-IHIYSASWGPEDdgrtvdgPGLLTQEAFRRGVTKGRQGLGTLFIWASGNGGlhydNC 305
Cdd:cd07498  75 ADslGYAYWSDIAQAITWAADNgADVISNSWGGSD-------STESISSAIDNAATYGRNGKGGVVLFAAGNSG----RS 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   306 NCDGYTNSIHTLSVGSTTRQGRVPWYSEACASTFTTTFSSGVVTD--PQIVTTDLHHQCTDKHTGTSASAPLAAGMIALA 383
Cdd:cd07498 144 VSSGYAANPSVIAVAATDSNDARASYSNYGNYVDLVAPGVGIWTTgtGRGSAGDYPGGGYGSFSGTSFASPVAAGVAALI 223
                       250
                ....*....|..
gi 220564   384 LEANPLLTWRDL 395
Cdd:cd07498 224 LSANPNLTPAEV 235
Peptidases_S8_S53 cd00306
Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and ...
149-401 1.38e-33

Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173787 [Multi-domain]  Cd Length: 241  Bit Score: 128.86  E-value: 1.38e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   149 VVISILDDGIEKDHPDLWANYDPlaSYDFNDYDPDPQPRYTPNDENRHGTRCAGEVSATANNGfCGAGVAFNARIGGVRM 228
Cdd:cd00306   1 VTVAVIDTGVDPDHPDLDGLFGG--GDGGNDDDDNENGPTDPDDGNGHGTHVAGIIAASANNG-GGVGVAPGAKLIPVKV 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   229 LD----GAITDIVEAQSLSLQPQHIHIYSASWGPEDDGRTVDgpgllTQEAFRRGVTKgrqgLGTLFIWASGNGGLHYDN 304
Cdd:cd00306  78 LDgdgsGSSSDIAAAIDYAAADQGADVINLSLGGPGSPPSSA-----LSEAIDYALAK----LGVLVVAAAGNDGPDGGT 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   305 cNCDGYTNSIHTLSVGSTTRQGRV-PWYSEACASTFTTTFSSGVVTDPQIVTTdlhhqCTDKHTGTSASAPLAAGMIALA 383
Cdd:cd00306 149 -NIGYPAASPNVIAVGAVDRDGTPaSPSSNGGAGVDIAAPGGDILSSPTTGGG-----GYATLSGTSMAAPIVAGVAALL 222
                       250
                ....*....|....*...
gi 220564   384 LEANPLLTWRDLQHLVVR 401
Cdd:cd00306 223 LSANPDLTPAQVKAALLS 240
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
34-110 4.51e-31

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 115.78  E-value: 4.51e-31
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 220564      34 SWAVRVTKGYQEAERLARKFGFVNLGQIFPDDQYFHLRHRGVAQQSLTPHWGHRLRLKKDPKVRWFEQQTLRRRVKR 110
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGLEDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
Peptidases_S8_Subtilisin_like cd07473
Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the ...
147-395 2.36e-28

Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173799 [Multi-domain]  Cd Length: 259  Bit Score: 114.21  E-value: 2.36e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   147 RGVVISILDDGIEKDHPDL----WAN---------------Y-DPLASYDFNDYDPDPQprytpnDENRHGTRCAGEVSA 206
Cdd:cd07473   2 GDVVVAVIDTGVDYNHPDLkdnmWVNpgeipgngidddgngYvDDIYGWNFVNNDNDPM------DDNGHGTHVAGIIGA 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   207 TANNGFCGAGVAFNARIGGVRMLD----GAITDIVEAQSLSLQpQHIHIYSASWGPeddgrtvDGPGLLTQEAFRRGVTK 282
Cdd:cd07473  76 VGNNGIGIAGVAWNVKIMPLKFLGadgsGTTSDAIKAIDYAVD-MGAKIINNSWGG-------GGPSQALRDAIARAIDA 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   283 grqglGTLFIWASGNGGLhyDNCNCDGYTNSI---HTLSVGSTTRQGRVPWYSeacaSTFTTT---FSSGVvtdpQIVTT 356
Cdd:cd07473 148 -----GILFVAAAGNDGT--NNDKTPTYPASYdldNIISVAATDSNDALASFS----NYGKKTvdlAAPGV----DILST 212
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 220564   357 DLHHQcTDKHTGTSASAPLAAGMIALALEANPLLTWRDL 395
Cdd:cd07473 213 SPGGG-YGYMSGTSMATPHVAGAAALLLSLNPNLTAAQI 250
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
488-553 2.26e-26

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 102.73  E-value: 2.26e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 220564     488 LEHVQVQLSLSYSRRGDLEIFLTSPMGTRSTLVAIRPLDISGQGYNNWIFMSTHYWDEDPQGLWTL 553
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTL 66
Peptidases_S8_Thermitase_like cd07484
Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, ...
114-389 2.50e-26

Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173810 [Multi-domain]  Cd Length: 260  Bit Score: 108.50  E-value: 2.50e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   114 VPTDPWFSKQWYMNKeiqqdLNILKAWNQgLTGRGVVISILDDGIEKDHPDlWANYDPLASYDFNDYDPDPQprytpnDE 193
Cdd:cd07484   1 TPNDPYYSYQWNLDQ-----IGAPKAWDI-TGGSGVTVAVVDTGVDPTHPD-LLKVKFVLGYDFVDNDSDAM------DD 67
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   194 NRHGTRCAGEVSATANNGFCGAGVAFNARIGGVRMLD----GAITDIVEAqslslqpqhIhIYSAswgpeDDGRTV---- 265
Cdd:cd07484  68 NGHGTHVAGIIAAATNNGTGVAGVAPKAKIMPVKVLDangsGSLADIANG---------I-RYAA-----DKGAKVinls 132
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   266 ---DGPGLLTQEAFRRGVTKgrqglGTLFIWASGNgglhyDNCNCDGYTNSI-HTLSVGSTTRQGRVPWYSeacastftt 341
Cdd:cd07484 133 lggGLGSTALQEAINYAWNK-----GVVVVAAAGN-----EGVSSVSYPAAYpGAIAVAATDQDDKRASFS--------- 193
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 220564   342 TFSSGV-VTDP--QIVTTDLHHQcTDKHTGTSASAPLAAGMIALALEANPL 389
Cdd:cd07484 194 NYGKWVdVSAPggGILSTTPDGD-YAYMSGTSMATPHVAGVAALLYSQGPL 243
Peptidases_S8_Autotransporter_serine_protease_like cd04848
Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine ...
145-398 1.44e-22

Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.


Pssm-ID: 173794 [Multi-domain]  Cd Length: 267  Bit Score: 97.78  E-value: 1.44e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   145 TGRGVVISILDDGIEKDHPDLWANYDPLASYDFNDYDPDPqpryTPNDENRHGTRCAGEVSATANNGFCGaGVAFNARIG 224
Cdd:cd04848   1 TGAGVKVGVIDSGIDLSHPEFAGRVSEASYYVAVNDAGYA----SNGDGDSHGTHVAGVIAAARDGGGMH-GVAPDATLY 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   225 GVRMLDGAITDIVEAQSLS----LQPQHIHIYSASWGPEDDGRTVDGP--------GLLTQEAFRRGVTKGrqglgTLFI 292
Cdd:cd04848  76 SARASASAGSTFSDADIAAaydfLAASGVRIINNSWGGNPAIDTVSTTykgsaatqGNTLLAALARAANAG-----GLFV 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   293 WASGNGGlhydncncdGYTNSI--------------HTLSVGSTTRQGRVP--WYSEACAstftTTFSSGVVTdP--QIV 354
Cdd:cd04848 151 FAAGNDG---------QANPSLaaaalpylepelegGWIAVVAVDPNGTIAsySYSNRCG----VAANWCLAA-PgeNIY 216
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 220564   355 TTDLHHQCT-DKHTGTSASAPLAAGMIALALEANPLLTWRDLQHL 398
Cdd:cd04848 217 STDPDGGNGyGRVSGTSFAAPHVSGAAALLAQKFPWLTADQVRQT 261
Peptidases_S8_1 cd07487
Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the ...
146-391 2.61e-20

Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173812 [Multi-domain]  Cd Length: 264  Bit Score: 91.11  E-value: 2.61e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   146 GRGVVISILDDGIEKDHPDLWAnydplASYDFNDYDPDPQPRYTPNDENRHGTRCAGEV--SATANNGFcGAGVAFNARI 223
Cdd:cd07487   1 GKGITVAVLDTGIDAPHPDFDG-----RIIRFADFVNTVNGRTTPYDDNGHGTHVAGIIagSGRASNGK-YKGVAPGANL 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   224 GGVRMLD----GAITDIVEAqslsLQ-------PQHIHIYSASWGPEDDGRTVDGPglLTQE---AFRRGVTkgrqglgt 289
Cdd:cd07487  75 VGVKVLDdsgsGSESDIIAG----IDwvvenneKYNIRVVNLSLGAPPDPSYGEDP--LCQAverLWDAGIV-------- 140
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   290 lFIWASGNGGLHYDNCNCDGytNSIHTLSVGSTTRQGRVpwyseacaSTFTTTFSSGVVT-----DPQIVT--------- 355
Cdd:cd07487 141 -VVVAAGNSGPGPGTITSPG--NSPKVITVGAVDDNGPH--------DDGISYFSSRGPTgdgriKPDVVApgenivscr 209
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 220564   356 -TDLHHQCTDKH-----TGTSASAPLAAGMIALALEANPLLT 391
Cdd:cd07487 210 sPGGNPGAGVGSgyfemSGTSMATPHVSGAIALLLQANPILT 251
Peptidases_S8_subtilisin_Vpr-like cd07474
Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic ...
146-391 5.37e-20

Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173800 [Multi-domain]  Cd Length: 295  Bit Score: 90.85  E-value: 5.37e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   146 GRGVVISILDDGIEKDHPDLWANYDPLAS----YDF--NDYDPDPQPRYT-------PNDENRHGTRCAGEVSATANNGF 212
Cdd:cd07474   1 GKGVKVAVIDTGIDYTHPDLGGPGFPNDKvkggYDFvdDDYDPMDTRPYPsplgdasAGDATGHGTHVAGIIAGNGVNVG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   213 CGAGVAFNARIGGVRMLD----GAITDIVEAQSLSLQPqHIHIYSASWgpeddGRTVDGPGLLTQEAFRRGVTkgrqgLG 288
Cdd:cd07474  81 TIKGVAPKADLYAYKVLGpggsGTTDVIIAAIEQAVDD-GMDVINLSL-----GSSVNGPDDPDAIAINNAVK-----AG 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   289 TLFIWASGNGGlhyDNCNCDG-YTNSIHTLSVGSTTrqGRVPWYSEacasTFTTTFSSGVVTDPQIVTTDLHHQCTD--- 364
Cdd:cd07474 150 VVVVAAAGNSG---PAPYTIGsPATAPSAITVGAST--VADVAEAD----TVGPSSSRGPPTSDSAIKPDIVAPGVDims 220
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 220564   365 ----------KHTGTSASAPLAAGMIALALEANPLLT 391
Cdd:cd07474 221 tapgsgtgyaRMSGTSMAAPHVAGAAALLKQAHPDWS 257
Peptidases_S8_Fervidolysin_like cd07485
Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans ...
138-388 1.94e-19

Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173811 [Multi-domain]  Cd Length: 273  Bit Score: 88.70  E-value: 1.94e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   138 KAWNQGLTGRGVVISILDDGIEKDHPDLWAN-----YDPlasyDFNDYDPDPQPRYTPNDE---NRHGTRCAGEVSATAN 209
Cdd:cd07485   1 AAWEFGTGGPGIIVAVVDTGVDGTHPDLQGNgdgdgYDP----AVNGYNFVPNVGDIDNDVsvgGGHGTHVAGTIAAVNN 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   210 NGFCGAGVAFNARIG-GVRMLDGAITDIVEAQSLSLQPQHIH--------IYSASWGpeddGRTVDGPGLLTQEAFRRGV 280
Cdd:cd07485  77 NGGGVGGIAGAGGVApGVKIMSIQIFAGRYYVGDDAVAAAIVyaadngavILQNSWG----GTGGGIYSPLLKDAFDYFI 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   281 TKGRQGL--GTLFIWASGN--GGLHYDNCNCDGytnsihTLSVGSTTRQGRVPWYseacaSTFTTTFSSGVVTDPQIVTT 356
Cdd:cd07485 153 ENAGGSPldGGIVVFSAGNsyTDEHRFPAAYPG------VIAVAALDTNDNKASF-----SNYGRWVDIAAPGVGTILST 221
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 220564   357 DLHHQCTDKHT-----GTSASAPLAAGMIALALEANP 388
Cdd:cd07485 222 VPKLDGDGGGNyeylsGTSMAAPHVSGVAALVLSKFP 258
Peptidases_S8_13 cd07496
Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the ...
148-391 5.42e-19

Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173820 [Multi-domain]  Cd Length: 285  Bit Score: 87.73  E-value: 5.42e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   148 GVVISILDDGIEKDHPD----LWANYD----PLASYDFNDYDPDPQ------------PRYTPNDENR----HGTRCAGE 203
Cdd:cd07496   1 GVVVAVLDTGVLFHHPDlagvLLPGYDfisdPAIANDGDGRDSDPTdpgdwvtgddvpPGGFCGSGVSpsswHGTHVAGT 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   204 VSATANNGFCGAGVAFNARIGGVRML---DGAITDIVEAqslslqpqhihIYSASwGPEDDGRTVD------------GP 268
Cdd:cd07496  81 IAAVTNNGVGVAGVAWGARILPVRVLgkcGGTLSDIVDG-----------MRWAA-GLPVPGVPVNpnpakvinlslgGD 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   269 GLLTQeAFRRGVTKGRQgLGTLFIWASGNGGLHYDN---CNCDGytnsihTLSVGSTTRQGRVPWYSE------------ 333
Cdd:cd07496 149 GACSA-TMQNAINDVRA-RGVLVVVAAGNEGSSASVdapANCRG------VIAVGATDLRGQRASYSNygpavdvsapgg 220
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 220564   334 ACAST-----------FTTTFSSGVVTDPQivttdlhhqctdkhtGTSASAPLAAGMIALALEANPLLT 391
Cdd:cd07496 221 DCASDvngdgypdsntGTTSPGGSTYGFLQ---------------GTSMAAPHVAGVAALMKSVNPSLT 274
Peptidases_S8_Subtilisin_subset cd07477
Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different ...
148-391 3.98e-18

Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173803 [Multi-domain]  Cd Length: 229  Bit Score: 83.74  E-value: 3.98e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   148 GVVISILDDGIEKDHPDLWANYdpLASYDFNDYDPDPqprytPNDENRHGTRCAGEVSAtANNGFCGAGVAFNARIGGVR 227
Cdd:cd07477   1 GVKVAVIDTGIDSSHPDLKLNI--VGGANFTGDDNND-----YQDGNGHGTHVAGIIAA-LDNGVGVVGVAPEADLYAVK 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   228 MLD----GAITDIVEAQSLSLQpQHIHIYSASWGPEDDGRTVdgpglltQEAFRRGVtkgRQGLgtLFIWASGNGGlhyd 303
Cdd:cd07477  73 VLNddgsGTYSDIIAGIEWAIE-NGMDIINMSLGGPSDSPAL-------REAIKKAY---AAGI--LVVAAAGNSG---- 135
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   304 ncNCDGYTNS----IHTLSVGSTTRQGRVpwyseacastftTTFSS----------GVvtdpQIVTTDLHHQCTDKhTGT 369
Cdd:cd07477 136 --NGDSSYDYpakyPSVIAVGAVDSNNNR------------ASFSStgpevelaapGV----DILSTYPNNDYAYL-SGT 196
                       250       260
                ....*....|....*....|..
gi 220564   370 SASAPLAAGMIALALEANPLLT 391
Cdd:cd07477 197 SMATPHVAGVAALVWSKRPELT 218
Peptidases_S8_BacillopeptidaseF-like cd07481
Peptidase S8 family domain in BacillopeptidaseF-like proteins; Bacillus subtilis produces and ...
146-390 3.03e-15

Peptidase S8 family domain in BacillopeptidaseF-like proteins; Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity.


Pssm-ID: 173807 [Multi-domain]  Cd Length: 264  Bit Score: 76.26  E-value: 3.03e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   146 GRGVVISILDDGIEKDHPDLWANYDPL----ASYDFNDYDPDPQPRyTPNDENRHGTRCAGevSATANNGFCGA-GVAFN 220
Cdd:cd07481   1 GTGIVVANIDTGVDWTHPALKNKYRGWgggsADHDYNWFDPVGNTP-LPYDDNGHGTHTMG--TMVGNDGDGQQiGVAPG 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   221 ARIGGVRMLD---GAITDIVEAQSLSLQPQHI-----------HIYSASWGpeddgrtvdGPGlLTQEAFRRGVTKGRQG 286
Cdd:cd07481  78 ARWIACRALDrngGNDADYLRCAQWMLAPTDSagnpadpdlapDVINNSWG---------GPS-GDNEWLQPAVAAWRAA 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   287 lGTLFIWASGNGGLHYDNCNcDGYTNSIHTLSVGSTTRQGRVpwyseacastftTTFSS-GVVTD----PQI------VT 355
Cdd:cd07481 148 -GIFPVFAAGNDGPRCSTLN-APPANYPESFAVGATDRNDVL------------ADFSSrGPSTYgrikPDIsapgvnIR 213
                       250       260       270
                ....*....|....*....|....*....|....*
gi 220564   356 TDLHHQCTDKHTGTSASAPLAAGMIALALEANPLL 390
Cdd:cd07481 214 SAVPGGGYGSSSGTSMAAPHVAGVAALLWSANPSL 248
Peptidases_S8_5 cd07489
Peptidase S8 family domain, uncharacterized subfamily 5; gap in seq This family is a member of ...
142-433 1.40e-14

Peptidase S8 family domain, uncharacterized subfamily 5; gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173814 [Multi-domain]  Cd Length: 312  Bit Score: 74.95  E-value: 1.40e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   142 QGLTGRGVVISILDDGIEKDHPDLWANYDP----LASYDF--NDYDPD--PQPRYTPNDENRHGTRCAGEVSATANN-GF 212
Cdd:cd07489   8 EGITGKGVKVAVVDTGIDYTHPALGGCFGPgckvAGGYDFvgDDYDGTnpPVPDDDPMDCQGHGTHVAGIIAANPNAyGF 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   213 cgAGVAFNARIGGVRML---DGAITDIVEAQSLSLQPQHIHIYSASWGpeddgrtvdGPGLLTQEAFrrGVTKGR-QGLG 288
Cdd:cd07489  88 --TGVAPEATLGAYRVFgcsGSTTEDTIIAAFLRAYEDGADVITASLG---------GPSGWSEDPW--AVVASRiVDAG 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   289 TLFIWASGN---GGLHYdncnCDGYTNSIHTLSVGSTtrqgrvpwyseacASTFTTTFSSG------VVTDP--QIVTTD 357
Cdd:cd07489 155 VVVTIAAGNdgeRGPFY----ASSPASGRGVIAVASV-------------DSYFSSWGPTNelylkpDVAAPggNILSTY 217
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 220564   358 LHHQCT-DKHTGTSASAPLAAGMIALALEA-NPLLTWRDLQHLVVRASRPAQLQaeDWRINGVGRQVSHHYGYGLLDA 433
Cdd:cd07489 218 PLAGGGyAVLSGTSMATPYVAGAAALLIQArHGKLSPAELRDLLASTAKPLPWS--DGTSALPDLAPVAQQGAGLVNA 293
Peptidases_S8_PCSK9_ProteinaseK_like cd04077
Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of ...
145-391 2.00e-14

Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.


Pssm-ID: 173790 [Multi-domain]  Cd Length: 255  Bit Score: 73.70  E-value: 2.00e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   145 TGRGVVISILDDGIEKDHPD-----LWAnydplasYDFNDYDPDpqprytpNDENRHGTRCAGEVSATANngfcgaGVAF 219
Cdd:cd04077  23 TGSGVDVYVLDTGIRTTHVEfggraIWG-------ADFVGGDPD-------SDCNGHGTHVAGTVGGKTY------GVAK 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   220 NARIGGVRMLD----GAITDIVEAqsLSLQPQHIH------IYSASWGpEDDGRTVDgpglltqEAFRRGVTKgrqglGT 289
Cdd:cd04077  83 KANLVAVKVLDcngsGTLSGIIAG--LEWVANDATkrgkpaVANMSLG-GGASTALD-------AAVAAAVNA-----GV 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   290 LFIWASGNGglHYDNCNcdgYT--NSIHTLSVGSTTRQGRVPWYSeaCASTFTTTFSSGVvtdpQIVTTdlHHQCTDKH- 366
Cdd:cd04077 148 VVVVAAGNS--NQDACN---YSpaSAPEAITVGATDSDDARASFS--NYGSCVDIFAPGV----DILSA--WIGSDTATa 214
                       250       260
                ....*....|....*....|....*..
gi 220564   367 --TGTSASAPLAAGMIALALEANPLLT 391
Cdd:cd04077 215 tlSGTSMAAPHVAGLAAYLLSLGPDLS 241
Peptidases_S8_Kp43_protease cd04842
Peptidase S8 family domain in Kp43 proteases; Kp43 proteases are members of the peptidase S8 ...
143-386 4.08e-14

Peptidase S8 family domain in Kp43 proteases; Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases


Pssm-ID: 173791 [Multi-domain]  Cd Length: 293  Bit Score: 73.52  E-value: 4.08e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   143 GLTGRGVVISILDDGIEKDHPDLwanYDPlasyDFNDYDP--------DPQPRyTPNDENRHGTRCAGEVSATANNGFC- 213
Cdd:cd04842   3 GLTGKGQIVGVADTGLDTNHCFF---YDP----NFNKTNLfhrkivryDSLSD-TKDDVDGHGTHVAGIIAGKGNDSSSi 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   214 --GAGVAFNARIGGVRMLDGAITDIVEAQSLSL----QPQHIHIYSASWGPEDDG------RTVDgpglltQEAFrrgvt 281
Cdd:cd04842  75 slYKGVAPKAKLYFQDIGDTSGNLSSPPDLNKLfspmYDAGARISSNSWGSPVNNgytllaRAYD------QFAY----- 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   282 KGRQglgTLFIWASGNGGLhyDNCNCDGY-TNSIHTLSVGSTTRQGrvPWYSEACASTFTTT-----FSSGVVTD----- 350
Cdd:cd04842 144 NNPD---ILFVFSAGNDGN--DGSNTIGSpATAKNVLTVGASNNPS--VSNGEGGLGQSDNSdtvasFSSRGPTYdgrik 216
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 220564   351 PQIVT------------TDLHHQCTDKHT---GTSASAPLAAGMIALALEA 386
Cdd:cd04842 217 PDLVApgtgilsarsggGGIGDTSDSAYTsksGTSMATPLVAGAAALLRQY 267
Peptidases_S8_6 cd07490
Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the ...
148-391 2.03e-12

Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173815 [Multi-domain]  Cd Length: 254  Bit Score: 67.57  E-value: 2.03e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   148 GVVISILDDGIEKDHPDL------WANYDPLASYDFNDYDpdpqprytpnDENRHGTRCAGEVSATANNGFcGAGVAFNA 221
Cdd:cd07490   1 GVTVAVLDTGVDADHPDLagrvaqWADFDENRRISATEVF----------DAGGHGTHVSGTIGGGGAKGV-YIGVAPEA 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   222 RIGGVRMLDG--------------AITDIVEAQSLSLqpqhihiysASWGPEDDgRTVDGPGLLTQEAfrrgvtkgrqgl 287
Cdd:cd07490  70 DLLHGKVLDDgggslsqiiagmewAVEKDADVVSMSL---------GGTYYSED-PLEEAVEALSNQT------------ 127
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   288 GTLFIWASGNGGlhYDNCNCDGytNSIHTLSVGSTTRQGRVPWYSEACASTFTTTFSSG------VVTDPQIVTTDLHHQ 361
Cdd:cd07490 128 GALFVVSAGNEG--HGTSGSPG--SAYAALSVGAVDRDDEDAWFSSFGSSGASLVSAPDsppdeyTKPDVAAPGVDVYSA 203
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 220564   362 CT--------DKHTGTSASAPLAAGMIALALEANPLLT 391
Cdd:cd07490 204 RQgangdgqyTRLSGTSMAAPHVAGVAALLAAAHPDLS 241
T7SS_mycosin TIGR03921
type VII secretion-associated serine protease mycosin; Members of this family are ...
134-466 4.95e-11

type VII secretion-associated serine protease mycosin; Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair]


Pssm-ID: 274856 [Multi-domain]  Cd Length: 350  Bit Score: 64.65  E-value: 4.95e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     134 LNILKAWnQGLTGRGVVISILDDGIEkDHPDLWANYDPLASYdFNDYDpdpqpryTPNDENRHGTRCAGEVSATANNGFC 213
Cdd:TIGR03921   1 LSLEQAW-KFSTGAGVTVAVIDTGVD-DHPRLPGLVLPGGDF-VGSGD-------GTDDCDGHGTLVAGIIAGRPGEGDG 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     214 GAGVAFNARIGGVRMLD------------GAITDIVEA--QSLSLQPQHIHIYSASWGPEddGRTVDGPGLltQEAFRRG 279
Cdd:TIGR03921  71 FSGVAPDARILPIRQTSaafepdegtsgvGDLGTLAKAirRAADLGADVINISLVACLPA--GSGADDPEL--GAAVRYA 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     280 VTKgrqglGTLFIWASGNGGlhyDNCNCDGYTNSIHT---LSVGSTTRQGRvpwyseacASTFTTTFSSGVVTDP--QIV 354
Cdd:TIGR03921 147 LDK-----GVVVVAAAGNTG---GDGQKTTVVYPAWYpgvLAVGSIDRDGT--------PSSFSLPGPWVDLAAPgeNIV 210
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564     355 TTDLHHQCTDKHTGTSASAPLAAGMIALALEANPLLTWRDLQH-LVVRASRPAqlqaedwrinGVGRQVShhYGYGLLD- 432
Cdd:TIGR03921 211 SLSPGGDGLATTSGTSFAAPFVSGTAALVRSRFPDLTAAQVRRrIEATADHPA----------RGGRDDY--VGYGVVDp 278
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 220564     433 -AGLLVDLARVWLPTKPQKKCAIRVVHTPTPILPR 466
Cdd:TIGR03921 279 vAALTGELPPEDGRPLRPAPAPARPVAAPAPPPPP 313
Peptidases_S8_Lantibiotic_specific_protease cd07482
Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific ...
149-391 5.85e-11

Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases; Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173808 [Multi-domain]  Cd Length: 294  Bit Score: 63.92  E-value: 5.85e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   149 VVISILDDGIEKDHPDLWANydpLASYdFNDYDPDPQPRYTPNDE----------NRHGTRCAGEVSATANNGfcgaGVA 218
Cdd:cd07482   2 VTVAVIDSGIDPDHPDLKNS---ISSY-SKNLVPKGGYDGKEAGEtgdindivdkLGHGTAVAGQIAANGNIK----GVA 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   219 FNARIGGVRMLD----GAITDIVEAQSLSLQpQHIHIYSASWGPEDDGRTVDGPGLLTQEAFRRGVTK------------ 282
Cdd:cd07482  74 PGIGIVSYRVFGscgsAESSWIIKAIIDAAD-DGVDVINLSLGGYLIIGGEYEDDDVEYNAYKKAINYakskgsivvaaa 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   283 GRQGL-----GTLFIWASGNGGLHYDNCNCDGYTNSIHTLSVGSTTRQGRVPWYSE---------ACASTFTTTFS---- 344
Cdd:cd07482 153 GNDGLdvsnkQELLDFLSSGDDFSVNGEVYDVPASLPNVITVSATDNNGNLSSFSNygnsridlaAPGGDFLLLDQygke 232
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 220564   345 ----SGVVTDPQIVTTDLhHQCTDKHTGTSASAPLAAGMIALALEANPLLT 391
Cdd:cd07482 233 kwvnNGLMTKEQILTTAP-EGGYAYMYGTSLAAPKVSGALALIIDKNPLKK 282
Peptidases_S8_8 cd07492
Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the ...
148-404 9.72e-11

Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173817 [Multi-domain]  Cd Length: 222  Bit Score: 61.97  E-value: 9.72e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   148 GVVISILDDGIEKDHPDLWAN--YDPLASYDFNDYDPDpqpryTPNDENRHGTRCAGEVSATANNGFCG-AGVAFNARIG 224
Cdd:cd07492   1 GVRVAVIDSGVDTDHPDLGNLalDGEVTIDLEIIVVSA-----EGGDKDGHGTACAGIIKKYAPEAEIGsIKILGEDGRC 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   225 GVRMLDGAITDIVEaqslslqpQHIHIYSASWGPEDDGRTVDGPGLLTQEAFRRGVtkgrqglgtlfIWASGNGGLHYDN 304
Cdd:cd07492  76 NSFVLEKALRACVE--------NDIRIVNLSLGGPGDRDFPLLKELLEYAYKAGGI-----------IVAAAPNNNDIGT 136
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   305 CNCDgYTNSIhtlSVGS-TTRQGRVPWYSEACastftttfssgVVTDPQIVTTDLHHQCTDKHTGTSASAPLAAGMIALA 383
Cdd:cd07492 137 PPAS-FPNVI---GVKSdTADDPKSFWYIYVE-----------FSADGVDIIAPAPHGRYLTVSGNSFAAPHVTGMVALL 201
                       250       260
                ....*....|....*....|.
gi 220564   384 LEANPLLTWRDLQHLVVRASR 404
Cdd:cd07492 202 LSEKPDIDANDLKRLLQRLAV 222
Peptidases_S8_12 cd07480
Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the ...
144-409 2.07e-10

Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173806 [Multi-domain]  Cd Length: 297  Bit Score: 62.39  E-value: 2.07e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   144 LTGRGVVISILDDGIEKDHPDLwANYDpLASYDFNdydpdpqPRYTPNDENRHGTRCAGEVSATANNGFcGAGVAFNARI 223
Cdd:cd07480   5 FTGAGVRVAVLDTGIDLTHPAF-AGRD-ITTKSFV-------GGEDVQDGHGHGTHCAGTIFGRDVPGP-RYGVARGAEI 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   224 --GGVRMLDGAITD--IVEAQSLSLQPQhIHIYSASWGPEDDGRTVDG--PGLLTQEAF--------------RRGVTKG 283
Cdd:cd07480  75 alIGKVLGDGGGGDggILAGIQWAVANG-ADVISMSLGADFPGLVDQGwpPGLAFSRALeayrqrarlfdalmTLVAAQA 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   284 RQGLGTLFIWASGNgglhydNCNCDGY-------TNSIHTLSVGSTTRQGRVPWYSEAcastftTTFSSGVVT--DPQI- 353
Cdd:cd07480 154 ALARGTLIVAAAGN------ESQRPAGippvgnpAACPSAMGVAAVGALGRTGNFSAV------ANFSNGEVDiaAPGVd 221
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 220564   354 VTTDLHHQCTDKHTGTSASAPLAAGMIALALEANPLLTWRDLQHLV---VRASRPAQLQ 409
Cdd:cd07480 222 IVSAAPGGGYRSMSGTSMATPHVAGVAALWAEALPKAGGRALAALLqarLTAARTTQFA 280
Peptidases_S8_10 cd07494
Peptidase S8 family domain, uncharacterized subfamily 10; This family is a member of the ...
129-404 6.41e-10

Peptidase S8 family domain, uncharacterized subfamily 10; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173819 [Multi-domain]  Cd Length: 298  Bit Score: 60.95  E-value: 6.41e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   129 EIQQDLNILKAWNQGLTGRGVVISILDDGIEKDHPDLWANYDPLASydfndydPDPQPRYTPNDENRHGTrcagevsATA 208
Cdd:cd07494   3 DLAALLNATRVHQRGITGRGVRVAMVDTGFYAHPFFESRGYQVRVV-------LAPGATDPACDENGHGT-------GES 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   209 NNGFcgaGVAFNARIGGVRMLDGAITDIVEA--QSLSLQPQhihIYSASWG-----PEDDGRTVDGPGL-----LTQEAF 276
Cdd:cd07494  69 ANLF---AIAPGAQFIGVKLGGPDLVNSVGAfkKAISLSPD---IISNSWGydlrsPGTSWSRSLPNALkalaaTLQDAV 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   277 RRGVTkgrqglgtlFIWASGNGGLHYDNCNCDgytnsihTLSVGSTTRQGRVPWYSEACASTFTTTFSSG-VVTDPQIVT 355
Cdd:cd07494 143 ARGIV---------VVFSAGNGGWSFPAQHPE-------VIAAGGVFVDEDGARRASSYASGFRSKIYPGrQVPDVCGLV 206
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 220564   356 TDLHHQ----------------CTDKH------------TGTSASAPLAAGMIALALEANPLLTWRDLQHLVVRASR 404
Cdd:cd07494 207 GMLPHAaylmlpvppgsqldrsCAAFPdgtppndgwgvfSGTSAAAPQVAGVCALMLQANPGLSPERARSLLNKTAR 283
COG4935 COG4935
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ...
489-553 2.50e-07

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443962 [Multi-domain]  Cd Length: 641  Bit Score: 54.06  E-value: 2.50e-07
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 220564   489 EHVQVQLSLSYSRRGDLEIFLTSPMGTRSTLvaIRPLDISGQGYnNWIFMSTHYWDEDPQGLWTL 553
Cdd:COG4935 558 EDVTVTVDITHTYRGDLVITLISPDGTTVVL--KNRSGGSADNI-NATFDVANFSGESANGTWTL 619
Peptidases_S53 cd04056
Peptidase domain in the S53 family; Members of the peptidases S53 (sedolisin) family include ...
139-387 9.82e-06

Peptidase domain in the S53 family; Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.


Pssm-ID: 173788 [Multi-domain]  Cd Length: 361  Bit Score: 48.08  E-value: 9.82e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   139 AWNQGLTGRGVVISILDDGiekdhpDLWANYDPLASYDFNDYDPDPQPRYTP--NDENRHGTRCAGEVSATANNGFCGAg 216
Cdd:cd04056  13 IPPLGYTGSGQTIGIIEFG------GGYYNPSDLQTFFQLFGLPAPTVFIVVviGGGNAPGTSSGWGGEASLDVEYAGA- 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   217 VAFNARI----GGVRMLDGAITDIVEAqsLSLQPQHIHIYSASWG-PEDDgrtvDGPGLLTQ--EAFRRGvtkGRQGLGT 289
Cdd:cd04056  86 IAPGANItlyfAPGTVTNGPLLAFLAA--VLDNPNLPSVISISYGePEQS----LPPAYAQRvcNLFAQA---AAQGITV 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   290 LFiwASGNGGLHYDNCNCDGYTNSIHT-------LSVGSTT--RQGRVPWYSEACASTFTTTFSSG-------------- 346
Cdd:cd04056 157 LA--ASGDSGAGGCGGDGSGTGFSVSFpasspyvTAVGGTTlyTGGTGSSAESTVWSSEGGWGGSGggfsnyfprpsyqs 234
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 220564   347 --VVTDPQIVTTDLHHQCT-------DKHT--------------GTSASAPLAAGMIALALEAN 387
Cdd:cd04056 235 gaVLGLPPSGLYNGSGRGVpdvaanaDPGTgylvvvngqwylvgGTSAAAPLFAGLIALINQAR 298
Peptidases_S8_14 cd07497
Peptidase S8 family domain, uncharacterized subfamily 14; This family is a member of the ...
146-386 1.03e-05

Peptidase S8 family domain, uncharacterized subfamily 14; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173821 [Multi-domain]  Cd Length: 311  Bit Score: 47.85  E-value: 1.03e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   146 GRGVVISILDDGIEKDHPDL--WANYDPLASYDFNDY---DPDPQPRYTP--NDENRHGTRCAGEVSATANNGFCG---- 214
Cdd:cd07497   1 GEGVVIAIVDTGVDYSHPDLdiYGNFSWKLKFDYKAYllpGMDKWGGFYVimYDFFSHGTSCASVAAGRGKMEYNLygyt 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   215 -----AGVAFNARIGGVR-------MLDGAITDIVEAQSLSL------QPQhIHIYSASWGPEDDGRTVDGPGLLTQEAF 276
Cdd:cd07497  81 gkfliRGIAPDAKIAAVKalwfgdvIYAWLWTAGFDPVDRKLswiytgGPR-VDVISNSWGISNFAYTGYAPGLDISSLV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   277 RRGVTKGRqglGTLFIWASGNGGLHYDNCNCDGytNSIHTLSVGSTTRQGRVPWYSEAcastfTTTFSSGVVTD------ 350
Cdd:cd07497 160 IDALVTYT---GVPIVSAAGNGGPGYGTITAPG--AASLAISVGAATNFDYRPFYLFG-----YLPGGSGDVVSwssrgp 229
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 220564   351 -------PQIV---------TTDLHHQCT-------DKHTGTSASAPLAAGMIALALEA 386
Cdd:cd07497 230 siagdpkPDLAaigafawapGRVLDSGGAldgneafDLFGGTSMATPMTAGSAALVISA 288
Peptidases_S8_9 cd07493
Peptidase S8 family domain, uncharacterized subfamily 9; This family is a member of the ...
148-404 1.25e-05

Peptidase S8 family domain, uncharacterized subfamily 9; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173818 [Multi-domain]  Cd Length: 261  Bit Score: 47.30  E-value: 1.25e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   148 GVVISILDDGIEKDH-----PDLWANYDPLASYDFndYDPDPQPRYTPNDenrHGTRCAGEVSATANNGFCGAgvAFNAR 222
Cdd:cd07493   1 GITIAVIDAGFPKVHeafafKHLFKNLRILGEYDF--VDNSNNTNYTDDD---HGTAVLSTMAGYTPGVMVGT--APNAS 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   223 IGGVRMLDGAITDIVE----------AQSL-------SLQPQHIHIYSASWGPED-DGRTvdgpGLLTQE---AFRRGVt 281
Cdd:cd07493  74 YYLARTEDVASETPVEednwvaaaewADSLgvdiissSLGYTTFDNPTYSYTYADmDGKT----SFISRAaniAASKGM- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   282 kgrqglgtLFIWASGNGGlhydNCNCDGYT---NSIHTLSVGSTTRQGRVpwyseacastftTTFSS-GVVTD----PQI 353
Cdd:cd07493 149 --------LVVNSAGNEG----STQWKGIGapaDAENVLSVGAVDANGNK------------ASFSSiGPTADgrlkPDV 204
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 220564   354 VTTDLHHQCTDKHT------GTSASAPLAAGMIALALEANPLLTWRDLQHLVVRASR 404
Cdd:cd07493 205 MALGTGIYVINGDGnityanGTSFSCPLIAGLIACLWQAHPNWTNLQIKEAILKSAS 261
Peptidases_S8_Subtilisin_like_2 cd04847
Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the ...
150-402 1.48e-05

Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173793 [Multi-domain]  Cd Length: 291  Bit Score: 47.30  E-value: 1.48e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   150 VISILDDGIEKDHPDLWAnydplASYDFNDYDPDPQpryTPNDENRHGTRCAG--------EVSATANNGFCgagVAFNA 221
Cdd:cd04847   2 IVCVLDSGINRGHPLLAP-----ALAEDDLDSDEPG---WTADDLGHGTAVAGlalygdltLPGNGLPRPGC---RLESV 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   222 RIGGVRM-----LDGAITDIVEAQSLSLQPQHIHIYSASWGPEDDGRtvDGP-----GLLTQEAFRRGVtkgrqglgtLF 291
Cdd:cd04847  71 RVLPPNGendpeLYGDITLRAIRRAVIQNPDIVRVFNLSLGSPLPID--DGRpsswaAALDQLAAEYDV---------LF 139
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   292 IWASGNGGLH-----YDNCNCDGYTN---SIHTLSVGSTTRQG------RVPWYSEACASTFTTTF--SSGVV------- 348
Cdd:cd04847 140 VVSAGNLGDDdaadgPPRIQDDEIEDpadSVNALTVGAITSDDditdraRYSAVGPAPAGATTSSGpgSPGPIkpdvvaf 219
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 220564   349 --------------TDPQIVTTdlHHQCTDKHT----GTSASAPLAAGMIALALEANPLLTwrdlqHLVVRA 402
Cdd:cd04847 220 ggnlaydpsgnaadGDLSLLTT--LSSPSGGGFvtvgGTSFAAPLAARLAAGLFAELPELS-----PETIRA 284
PTZ00262 PTZ00262
subtilisin-like protease; Provisional
151-414 1.07e-04

subtilisin-like protease; Provisional


Pssm-ID: 240338 [Multi-domain]  Cd Length: 639  Bit Score: 45.34  E-value: 1.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564    151 ISILDDGIEKDHPDLWANY---------------------DPLASYDFNDYDPDPQprytpnDENRHGTRCAGEVSATAN 209
Cdd:PTZ00262 320 ICVIDSGIDYNHPDLHDNIdvnvkelhgrkgidddnngnvDDEYGANFVNNDGGPM------DDNYHGTHVSGIISAIGN 393
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564    210 NGFCGAGVAFNARIGGVRMLD----GAITDIVEAQSLSLQpQHIHIYSASWgpeddgrTVDGPGLLTQEAFrrgvtKGRQ 285
Cdd:PTZ00262 394 NNIGIVGVDKRSKLIICKALDshklGRLGDMFKCFDYCIS-REAHMINGSF-------SFDEYSGIFNESV-----KYLE 460
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564    286 GLGTLFIWASGN------GGLHYDNCNCD-------GYTNSIHTLSVGSTTRQGRVPWYSEACASTFTTTFSSGVVTDPQ 352
Cdd:PTZ00262 461 EKGILFVVSASNcshtkeSKPDIPKCDLDvnkvyppILSKKLRNVITVSNLIKDKNNQYSLSPNSFYSAKYCQLAAPGTN 540
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 220564    353 IVTTDLHHQCTdKHTGTSASAPLAAGMIALALEANPLLTWRDlqhlVVRASRPAQLQAEDWR 414
Cdd:PTZ00262 541 IYSTFPKNSYR-KLNGTSMAAPHVAAIASLILSINPSLSYEE----VIRILKESIVQLPSLK 597
Peptidases_S53_like cd05562
Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include ...
367-439 1.71e-04

Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.


Pssm-ID: 173798 [Multi-domain]  Cd Length: 275  Bit Score: 43.82  E-value: 1.71e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 220564   367 TGTSASAPLAAGMIALALEANPLLTwrdlqhlvvrasrPAQLQ------AEDwrINGVGRQVShhYGYGLLDAGLLVDL 439
Cdd:cd05562 214 FGTSAAAPHAAGVAALVLSANPGLT-------------PADIRdalrstALD--MGEPGYDNA--SGSGLVDADRAVAA 275
Peptidases_S8_SKI-1_like cd07479
Peptidase S8 family domain in SKI-1-like proteins; SKI-1 (type I membrane-bound ...
140-207 4.00e-04

Peptidase S8 family domain in SKI-1-like proteins; SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173805 [Multi-domain]  Cd Length: 255  Bit Score: 42.44  E-value: 4.00e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 220564   140 WNQGLTGRGVVISILDDGIEKDHPDL--------WANYDplasydfndydpdpqpryTPNDENRHGTRCAGEVSAT 207
Cdd:cd07479   1 WQLGYTGAGVKVAVFDTGLAKDHPHFrnvkertnWTNEK------------------TLDDGLGHGTFVAGVIASS 58
Peptidases_S8_11 cd04843
Peptidase S8 family domain, uncharacterized subfamily 11; This family is a member of the ...
134-383 1.02e-03

Peptidase S8 family domain, uncharacterized subfamily 11; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173792  Cd Length: 277  Bit Score: 41.53  E-value: 1.02e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   134 LNILKAWNQ-GLTGRGVVISILDDGIEKDHPDLWANydpLASydfndydpdPQPRYTPNDENRHGTRCAGEVSAtANNGF 212
Cdd:cd04843   2 INARYAWTKpGGSGQGVTFVDIEQGWNLNHEDLVGN---GIT---------LISGLTDQADSDHGTAVLGIIVA-KDNGI 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   213 CGAGVAFNARIG--GVRMLDGAITDIVEAqSLSLQPQHIHIYSASWGPEDDGrTVDGPGLLTQEAFRrgVTKGRQGLGTL 290
Cdd:cd04843  69 GVTGIAHGAQAAvvSSTRVSNTADAILDA-ADYLSPGDVILLEMQTGGPNNG-YPPLPVEYEQANFD--AIRTATDLGII 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   291 FIWASGNGGLHYDNC-NCDGYTNSI--------HTLSVG-STTRQGRVPWYSeacaSTF------------TTTFSSGVV 348
Cdd:cd04843 145 VVEAAGNGGQDLDAPvYNRGPILNRfspdfrdsGAIMVGaGSSTTGHTRLAF----SNYgsrvdvygwgenVTTTGYGDL 220
                       250       260       270
                ....*....|....*....|....*....|....*
gi 220564   349 TDPQivttDLHHQCTDKHTGTSASAPLAAGMIALA 383
Cdd:cd04843 221 QDLG----GENQDYTDSFSGTSSASPIVAGAAASI 251
Peptidases_S8_2 cd07488
Peptidase S8 family domain, uncharacterized subfamily 2; This family is a member of the ...
288-385 6.52e-03

Peptidase S8 family domain, uncharacterized subfamily 2; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173813  Cd Length: 247  Bit Score: 38.99  E-value: 6.52e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220564   288 GTLFIWASGNGGLHYDNC-NCDGYTNSIHTLSVGSTTRQGRvPWySEACASTFTTTFSSGVVTDPQIVTT----DLHHQC 362
Cdd:cd07488 123 EVINVFSAGNQGKEKEKFgGISIPTLAYNSIVVGSTDRNGD-RF-FASDVSNAGSEINSYGRRKVLIVAPgsnyNLPDGK 200
                        90       100
                ....*....|....*....|...
gi 220564   363 TDKHTGTSASAPLAAGMIALALE 385
Cdd:cd07488 201 DDFVSGTSFSAPLVTGIIALLLE 223
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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